Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0314690 | XP_013462644.1 | 94.904 | 157 | 8 | 0 | 1 | 157 | 1 | 157 | 2.56e-92 | 295 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0314690 | sp|Q9FK76|SBT56_ARATH | 53.425 | 146 | 59 | 3 | 20 | 157 | 19 | 163 | 1.44e-42 | 153 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0005500 | Msa0314690 | 0.831401 | 1.704726e-55 | -8.615850e-47 |
Msa0028050 | Msa0314690 | 0.826428 | 2.728010e-54 | -8.615850e-47 |
Msa0049670 | Msa0314690 | 0.802172 | 6.363285e-49 | -8.615850e-47 |
Msa0060080 | Msa0314690 | 0.803136 | 4.025414e-49 | -8.615850e-47 |
Msa0066860 | Msa0314690 | 0.805963 | 1.035677e-49 | -8.615850e-47 |
Msa0067750 | Msa0314690 | 0.804472 | 2.125128e-49 | -8.615850e-47 |
Msa0104900 | Msa0314690 | 0.804309 | 2.298451e-49 | -8.615850e-47 |
Msa0118250 | Msa0314690 | 0.811458 | 6.932104e-51 | -8.615850e-47 |
Msa0127060 | Msa0314690 | 0.811342 | 7.345261e-51 | -8.615850e-47 |
Msa0137810 | Msa0314690 | 0.802792 | 4.742173e-49 | -8.615850e-47 |
Msa0164310 | Msa0314690 | 0.810632 | 1.046778e-50 | -8.615850e-47 |
Msa0169320 | Msa0314690 | 0.800248 | 1.575704e-48 | -8.615850e-47 |
Msa0172310 | Msa0314690 | 0.808839 | 2.542327e-50 | -8.615850e-47 |
Msa0198140 | Msa0314690 | 0.814291 | 1.660460e-51 | -8.615850e-47 |
Msa0198220 | Msa0314690 | 0.811938 | 5.449775e-51 | -8.615850e-47 |
Msa0258280 | Msa0314690 | 0.818294 | 2.113352e-52 | -8.615850e-47 |
Msa0269610 | Msa0314690 | 0.822941 | 1.809130e-53 | -8.615850e-47 |
Msa0278340 | Msa0314690 | 0.812142 | 4.918428e-51 | -8.615850e-47 |
Msa0297320 | Msa0314690 | 0.819788 | 9.664603e-53 | -8.615850e-47 |
Msa0304020 | Msa0314690 | 0.801322 | 9.511298e-49 | -8.615850e-47 |
Msa0308300 | Msa0314690 | 0.830632 | 2.632485e-55 | -8.615850e-47 |
Msa0314690 | Msa0318280 | 0.812583 | 3.940906e-51 | -8.615850e-47 |
Msa0314690 | Msa0327870 | 0.803702 | 3.072662e-49 | -8.615850e-47 |
Msa0314690 | Msa0330770 | 0.808162 | 3.546268e-50 | -8.615850e-47 |
Msa0314690 | Msa0372550 | 0.802634 | 5.111907e-49 | -8.615850e-47 |
Msa0314690 | Msa0376480 | 0.808254 | 3.390590e-50 | -8.615850e-47 |
Msa0314690 | Msa0379590 | 0.808599 | 2.861179e-50 | -8.615850e-47 |
Msa0314690 | Msa0379890 | 0.827665 | 1.380323e-54 | -8.615850e-47 |
Msa0314690 | Msa0379900 | 0.810884 | 9.230133e-51 | -8.615850e-47 |
Msa0314690 | Msa0379950 | 0.820622 | 6.221814e-53 | -8.615850e-47 |
Msa0314690 | Msa0384330 | 0.809660 | 1.695068e-50 | -8.615850e-47 |
Msa0314690 | Msa0390350 | 0.801246 | 9.858425e-49 | -8.615850e-47 |
Msa0314690 | Msa0404880 | 0.834474 | 2.935167e-56 | -8.615850e-47 |
Msa0314690 | Msa0429000 | 0.801970 | 7.001273e-49 | -8.615850e-47 |
Msa0314690 | Msa0444310 | 0.804772 | 1.840041e-49 | -8.615850e-47 |
Msa0314690 | Msa0450430 | 0.824242 | 8.975862e-54 | -8.615850e-47 |
Msa0314690 | Msa0475700 | 0.832074 | 1.162899e-55 | -8.615850e-47 |
Msa0314690 | Msa0476820 | 0.802221 | 6.219152e-49 | -8.615850e-47 |
Msa0314690 | Msa0486850 | 0.806366 | 8.516928e-50 | -8.615850e-47 |
Msa0314690 | Msa0501920 | 0.815583 | 8.581739e-52 | -8.615850e-47 |
Msa0314690 | Msa0516340 | 0.804951 | 1.687966e-49 | -8.615850e-47 |
Msa0314690 | Msa0533140 | 0.809396 | 1.931925e-50 | -8.615850e-47 |
Msa0314690 | Msa0540160 | 0.805559 | 1.259406e-49 | -8.615850e-47 |
Msa0314690 | Msa0546020 | 0.804357 | 2.245373e-49 | -8.615850e-47 |
Msa0314690 | Msa0554430 | 0.801476 | 8.845565e-49 | -8.615850e-47 |
Msa0314690 | Msa0558800 | 0.803018 | 4.259532e-49 | -8.615850e-47 |
Msa0314690 | Msa0560010 | 0.821290 | 4.367129e-53 | -8.615850e-47 |
Msa0314690 | Msa0564580 | 0.841241 | 5.355013e-58 | -8.615850e-47 |
Msa0314690 | Msa0577350 | 0.813302 | 2.742266e-51 | -8.615850e-47 |
Msa0314690 | Msa0577960 | 0.803266 | 3.783251e-49 | -8.615850e-47 |
Msa0314690 | Msa0588600 | 0.801612 | 8.294117e-49 | -8.615850e-47 |
Msa0314690 | Msa0614060 | 0.803126 | 4.045588e-49 | -8.615850e-47 |
Msa0314690 | Msa0625550 | 0.802629 | 5.124385e-49 | -8.615850e-47 |
Msa0314690 | Msa0626900 | 0.802740 | 4.860639e-49 | -8.615850e-47 |
Msa0314690 | Msa0661040 | 0.801659 | 8.111437e-49 | -8.615850e-47 |
Msa0314690 | Msa0681190 | 0.800288 | 1.546337e-48 | -8.615850e-47 |
Msa0314690 | Msa0697230 | 0.801394 | 9.194506e-49 | -8.615850e-47 |
Msa0314690 | Msa0700430 | 0.811408 | 7.105004e-51 | -8.615850e-47 |
Msa0314690 | Msa0700870 | 0.808314 | 3.291594e-50 | -8.615850e-47 |
Msa0314690 | Msa0700930 | 0.805418 | 1.347853e-49 | -8.615850e-47 |
Msa0314690 | Msa0703620 | 0.806835 | 6.781070e-50 | -8.615850e-47 |
Msa0314690 | Msa0703820 | 0.816941 | 4.264346e-52 | -8.615850e-47 |
Msa0314690 | Msa0705710 | 0.800926 | 1.145997e-48 | -8.615850e-47 |
Msa0314690 | Msa0721650 | 0.827662 | 1.382320e-54 | -8.615850e-47 |
Msa0314690 | Msa0729590 | 0.811169 | 8.007471e-51 | -8.615850e-47 |
Msa0314690 | Msa0741600 | 0.806279 | 8.884825e-50 | -8.615850e-47 |
Msa0314690 | Msa0741710 | 0.801590 | 8.380838e-49 | -8.615850e-47 |
Msa0314690 | Msa0762390 | 0.800634 | 1.314788e-48 | -8.615850e-47 |
Msa0314690 | Msa0802270 | 0.816464 | 5.457333e-52 | -8.615850e-47 |
Msa0314690 | Msa0829110 | 0.815976 | 7.012821e-52 | -8.615850e-47 |
Msa0314690 | Msa0872890 | 0.825604 | 4.281889e-54 | -8.615850e-47 |
Msa0314690 | Msa0876150 | 0.832692 | 8.178939e-56 | -8.615850e-47 |
Msa0314690 | Msa0911490 | 0.804582 | 2.015899e-49 | -8.615850e-47 |
Msa0314690 | Msa0937350 | 0.808144 | 3.577144e-50 | -8.615850e-47 |
Msa0314690 | Msa0938190 | 0.804228 | 2.389374e-49 | -8.615850e-47 |
Msa0314690 | Msa0967670 | 0.812815 | 3.505921e-51 | -8.615850e-47 |
Msa0314690 | Msa1044790 | 0.819579 | 1.078344e-52 | -8.615850e-47 |
Msa0314690 | Msa1056590 | 0.807545 | 4.796542e-50 | -8.615850e-47 |
Msa0314690 | Msa1109500 | 0.831884 | 1.295745e-55 | -8.615850e-47 |
Msa0314690 | Msa1110030 | 0.806269 | 8.927754e-50 | -8.615850e-47 |
Msa0314690 | Msa1144420 | 0.814991 | 1.161918e-51 | -8.615850e-47 |
Msa0314690 | Msa1145930 | 0.822547 | 2.234214e-53 | -8.615850e-47 |
Msa0314690 | Msa1150130 | 0.806785 | 6.947502e-50 | -8.615850e-47 |
Msa0314690 | Msa1182960 | 0.819953 | 8.856547e-53 | -8.615850e-47 |
Msa0314690 | Msa1236990 | 0.809915 | 1.494200e-50 | -8.615850e-47 |
Msa0314690 | Msa1239000 | 0.804066 | 2.581378e-49 | -8.615850e-47 |
Msa0314690 | Msa1278080 | 0.800347 | 1.503711e-48 | -8.615850e-47 |
Msa0314690 | Msa1317340 | 0.822428 | 2.381137e-53 | -8.615850e-47 |
Msa0314690 | Msa1345490 | 0.833725 | 4.522047e-56 | -8.615850e-47 |
Msa0314690 | Msa1364420 | 0.803144 | 4.011106e-49 | -8.615850e-47 |
Msa0314690 | Msa1368800 | 0.829102 | 6.209179e-55 | -8.615850e-47 |
Msa0314690 | Msa1374610 | 0.800545 | 1.370941e-48 | -8.615850e-47 |
Msa0314690 | Msa1378840 | 0.809999 | 1.433507e-50 | -8.615850e-47 |
Msa0314690 | Msa1389990 | 0.802693 | 4.970720e-49 | -8.615850e-47 |
Msa0314690 | Msa1414560 | 0.804875 | 1.750750e-49 | -8.615850e-47 |
Msa0314690 | Msa1426690 | 0.804836 | 1.784364e-49 | -8.615850e-47 |
Msa0314690 | Msa1433060 | 0.806822 | 6.824365e-50 | -8.615850e-47 |
Msa0314690 | Msa1464470 | 0.816794 | 4.602045e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0314690 | MtrunA17_Chr2g0285121 | 94.904 | 157 | 8 | 0 | 1 | 157 | 1 | 157 | 2.35e-96 | 295 |
Msa0314690 | MtrunA17_Chr2g0285111 | 82.609 | 161 | 24 | 3 | 1 | 157 | 1 | 161 | 4.06e-80 | 252 |
Msa0314690 | MtrunA17_Chr8g0377961 | 32.432 | 148 | 80 | 4 | 13 | 157 | 29 | 159 | 1.31e-18 | 82.0 |
Msa0314690 | MtrunA17_Chr5g0447151 | 35.766 | 137 | 73 | 4 | 26 | 157 | 29 | 155 | 3.15e-18 | 76.6 |
Msa0314690 | MtrunA17_Chr8g0354731 | 36.154 | 130 | 69 | 4 | 28 | 156 | 54 | 170 | 6.12e-18 | 76.3 |
Msa0314690 | MtrunA17_Chr4g0057521 | 42.857 | 98 | 46 | 2 | 61 | 158 | 13 | 100 | 2.83e-17 | 74.3 |
Msa0314690 | MtrunA17_Chr4g0057501 | 34.559 | 136 | 75 | 4 | 28 | 159 | 7 | 132 | 4.96e-17 | 72.8 |
Msa0314690 | MtrunA17_Chr8g0354771 | 35.385 | 130 | 73 | 3 | 28 | 157 | 26 | 144 | 8.67e-17 | 76.6 |
Msa0314690 | MtrunA17_Chr5g0439281 | 35.766 | 137 | 73 | 4 | 26 | 157 | 28 | 154 | 1.24e-16 | 73.6 |
Msa0314690 | MtrunA17_Chr8g0369891 | 38.462 | 143 | 68 | 6 | 19 | 157 | 26 | 152 | 3.50e-16 | 75.1 |
Msa0314690 | MtrunA17_Chr8g0351011 | 41.818 | 110 | 48 | 3 | 48 | 157 | 64 | 157 | 3.74e-16 | 74.7 |
Msa0314690 | MtrunA17_Chr7g0250481 | 35.294 | 136 | 72 | 5 | 26 | 157 | 30 | 153 | 2.15e-15 | 72.8 |
Msa0314690 | MtrunA17_Chr7g0246451 | 36.429 | 140 | 68 | 5 | 19 | 157 | 32 | 151 | 2.44e-15 | 72.4 |
Msa0314690 | MtrunA17_Chr3g0079971 | 34.132 | 167 | 77 | 7 | 3 | 157 | 1 | 146 | 2.68e-15 | 72.4 |
Msa0314690 | MtrunA17_Chr3g0143251 | 34.868 | 152 | 78 | 6 | 11 | 157 | 15 | 150 | 5.24e-15 | 71.6 |
Msa0314690 | MtrunA17_Chr5g0407701 | 35.625 | 160 | 85 | 6 | 3 | 157 | 1 | 147 | 1.71e-14 | 70.1 |
Msa0314690 | MtrunA17_Chr3g0143241 | 33.088 | 136 | 71 | 6 | 24 | 157 | 33 | 150 | 2.21e-14 | 69.7 |
Msa0314690 | MtrunA17_Chr4g0026641 | 30.921 | 152 | 89 | 5 | 6 | 157 | 7 | 142 | 2.68e-14 | 69.3 |
Msa0314690 | MtrunA17_Chr8g0376841 | 34.247 | 146 | 72 | 4 | 19 | 157 | 33 | 161 | 3.20e-14 | 69.3 |
Msa0314690 | MtrunA17_Chr5g0398311 | 34.426 | 122 | 64 | 3 | 41 | 160 | 52 | 159 | 6.12e-14 | 68.6 |
Msa0314690 | MtrunA17_Chr3g0105461 | 34.965 | 143 | 76 | 5 | 18 | 159 | 25 | 151 | 1.30e-13 | 67.0 |
Msa0314690 | MtrunA17_Chr8g0334491 | 35.000 | 140 | 68 | 6 | 20 | 157 | 27 | 145 | 1.33e-13 | 67.4 |
Msa0314690 | MtrunA17_Chr6g0470851 | 37.500 | 112 | 50 | 5 | 48 | 157 | 54 | 147 | 2.73e-13 | 66.6 |
Msa0314690 | MtrunA17_Chr4g0057471 | 39.175 | 97 | 49 | 2 | 61 | 157 | 6 | 92 | 3.81e-13 | 66.2 |
Msa0314690 | MtrunA17_Chr2g0301901 | 37.594 | 133 | 65 | 6 | 1 | 122 | 1 | 126 | 3.82e-13 | 63.2 |
Msa0314690 | MtrunA17_Chr8g0334521 | 31.579 | 152 | 85 | 4 | 6 | 157 | 18 | 150 | 4.13e-13 | 66.2 |
Msa0314690 | MtrunA17_Chr1g0146251 | 32.143 | 168 | 76 | 7 | 6 | 157 | 2 | 147 | 4.96e-13 | 65.9 |
Msa0314690 | MtrunA17_Chr7g0250371 | 33.775 | 151 | 82 | 5 | 11 | 157 | 18 | 154 | 5.05e-13 | 65.9 |
Msa0314690 | MtrunA17_Chr6g0470881 | 37.500 | 112 | 50 | 5 | 48 | 157 | 54 | 147 | 6.17e-13 | 65.5 |
Msa0314690 | MtrunA17_Chr7g0250391 | 33.333 | 156 | 86 | 5 | 6 | 157 | 12 | 153 | 7.35e-13 | 65.5 |
Msa0314690 | MtrunA17_Chr3g0103061 | 28.947 | 152 | 94 | 4 | 12 | 157 | 11 | 154 | 8.10e-13 | 64.3 |
Msa0314690 | MtrunA17_Chr1g0146271 | 33.333 | 138 | 73 | 4 | 20 | 157 | 29 | 147 | 8.73e-13 | 65.1 |
Msa0314690 | MtrunA17_Chr4g0035871 | 40.789 | 76 | 43 | 1 | 43 | 118 | 12 | 85 | 1.03e-12 | 62.4 |
Msa0314690 | MtrunA17_Chr7g0266051 | 36.283 | 113 | 56 | 3 | 45 | 157 | 13 | 109 | 1.59e-12 | 64.3 |
Msa0314690 | MtrunA17_Chr4g0057531 | 28.986 | 138 | 84 | 3 | 24 | 157 | 30 | 157 | 3.19e-12 | 63.5 |
Msa0314690 | MtrunA17_Chr3g0120521 | 28.148 | 135 | 84 | 3 | 28 | 157 | 31 | 157 | 4.24e-12 | 63.2 |
Msa0314690 | MtrunA17_Chr7g0227991 | 31.126 | 151 | 81 | 6 | 9 | 157 | 20 | 149 | 5.20e-12 | 62.8 |
Msa0314690 | MtrunA17_Chr7g0261681 | 38.202 | 89 | 46 | 2 | 67 | 155 | 1 | 80 | 5.74e-12 | 58.9 |
Msa0314690 | MtrunA17_Chr1g0189561 | 28.916 | 166 | 85 | 7 | 5 | 157 | 6 | 151 | 5.76e-12 | 62.8 |
Msa0314690 | MtrunA17_Chr8g0346351 | 29.870 | 154 | 85 | 6 | 6 | 157 | 15 | 147 | 6.22e-12 | 60.5 |
Msa0314690 | MtrunA17_Chr4g0076611 | 37.363 | 91 | 48 | 2 | 67 | 157 | 1 | 82 | 6.25e-12 | 62.8 |
Msa0314690 | MtrunA17_Chr3g0143021 | 34.783 | 92 | 46 | 2 | 66 | 157 | 6 | 83 | 1.13e-11 | 58.5 |
Msa0314690 | MtrunA17_Chr6g0480721 | 37.363 | 91 | 40 | 2 | 67 | 157 | 5 | 78 | 1.21e-11 | 61.6 |
Msa0314690 | MtrunA17_Chr7g0250411 | 33.775 | 151 | 82 | 5 | 11 | 157 | 18 | 154 | 1.51e-11 | 61.6 |
Msa0314690 | MtrunA17_Chr3g0136151 | 32.836 | 134 | 69 | 4 | 24 | 157 | 34 | 146 | 2.33e-11 | 60.8 |
Msa0314690 | MtrunA17_Chr7g0250461 | 33.775 | 151 | 82 | 5 | 11 | 157 | 18 | 154 | 5.13e-11 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0314690 | AT5G45650.2 | 53.425 | 146 | 59 | 3 | 20 | 157 | 19 | 163 | 1.47e-43 | 153 |
Msa0314690 | AT5G45650.1 | 53.425 | 146 | 59 | 3 | 20 | 157 | 19 | 163 | 1.47e-43 | 153 |
Msa0314690 | AT4G21630.1 | 31.361 | 169 | 96 | 4 | 3 | 157 | 1 | 163 | 6.39e-18 | 80.5 |
Msa0314690 | AT5G03620.2 | 36.538 | 156 | 78 | 5 | 8 | 159 | 11 | 149 | 7.57e-18 | 80.1 |
Msa0314690 | AT5G03620.1 | 36.538 | 156 | 78 | 5 | 8 | 159 | 11 | 149 | 9.40e-18 | 79.7 |
Msa0314690 | AT4G21650.1 | 35.075 | 134 | 81 | 3 | 24 | 157 | 38 | 165 | 1.58e-17 | 79.3 |
Msa0314690 | AT4G21640.1 | 32.836 | 134 | 86 | 2 | 24 | 157 | 38 | 167 | 2.47e-16 | 75.9 |
Msa0314690 | AT4G10520.1 | 33.951 | 162 | 80 | 7 | 6 | 157 | 1 | 145 | 2.71e-16 | 75.5 |
Msa0314690 | AT4G10540.1 | 30.827 | 133 | 78 | 4 | 25 | 157 | 28 | 146 | 5.65e-16 | 74.7 |
Msa0314690 | AT4G10550.3 | 30.882 | 136 | 80 | 4 | 22 | 157 | 45 | 166 | 1.46e-15 | 73.6 |
Msa0314690 | AT4G10550.1 | 30.882 | 136 | 80 | 4 | 22 | 157 | 29 | 150 | 1.55e-15 | 73.6 |
Msa0314690 | AT1G66210.1 | 31.579 | 152 | 89 | 4 | 6 | 157 | 20 | 156 | 1.59e-15 | 73.6 |
Msa0314690 | AT4G10530.1 | 33.824 | 136 | 70 | 5 | 25 | 157 | 27 | 145 | 1.60e-15 | 73.6 |
Msa0314690 | AT5G58830.1 | 34.810 | 158 | 74 | 7 | 8 | 157 | 10 | 146 | 2.50e-15 | 72.8 |
Msa0314690 | AT4G00230.2 | 35.878 | 131 | 63 | 6 | 28 | 157 | 38 | 148 | 2.52e-15 | 72.8 |
Msa0314690 | AT4G00230.1 | 35.878 | 131 | 63 | 6 | 28 | 157 | 38 | 148 | 2.62e-15 | 72.8 |
Msa0314690 | AT5G11940.1 | 30.519 | 154 | 91 | 4 | 6 | 157 | 14 | 153 | 2.63e-15 | 72.8 |
Msa0314690 | AT3G46850.1 | 35.714 | 154 | 78 | 6 | 8 | 157 | 10 | 146 | 5.59e-15 | 72.0 |
Msa0314690 | AT4G10510.3 | 31.579 | 133 | 77 | 4 | 25 | 157 | 32 | 150 | 6.39e-15 | 71.6 |
Msa0314690 | AT5G58840.2 | 34.416 | 154 | 81 | 5 | 8 | 157 | 11 | 148 | 6.91e-15 | 71.6 |
Msa0314690 | AT5G45640.1 | 42.268 | 97 | 43 | 2 | 74 | 157 | 37 | 133 | 8.49e-15 | 71.2 |
Msa0314690 | AT1G32950.1 | 26.712 | 146 | 93 | 3 | 12 | 157 | 14 | 145 | 8.69e-15 | 71.2 |
Msa0314690 | AT1G66220.1 | 33.083 | 133 | 75 | 3 | 25 | 157 | 35 | 153 | 1.09e-14 | 70.9 |
Msa0314690 | AT4G10510.1 | 32.061 | 131 | 75 | 4 | 27 | 157 | 22 | 138 | 1.19e-14 | 70.9 |
Msa0314690 | AT2G04160.1 | 31.206 | 141 | 82 | 4 | 22 | 157 | 26 | 156 | 1.35e-14 | 70.9 |
Msa0314690 | AT5G58840.3 | 34.416 | 154 | 81 | 5 | 8 | 157 | 11 | 148 | 1.44e-14 | 70.5 |
Msa0314690 | AT5G58820.1 | 36.184 | 152 | 76 | 5 | 10 | 157 | 8 | 142 | 1.55e-14 | 70.5 |
Msa0314690 | AT1G32940.3 | 31.618 | 136 | 79 | 4 | 22 | 157 | 24 | 145 | 1.94e-14 | 70.1 |
Msa0314690 | AT1G32940.1 | 31.618 | 136 | 79 | 4 | 22 | 157 | 24 | 145 | 2.46e-14 | 70.1 |
Msa0314690 | AT5G58840.1 | 36.765 | 136 | 70 | 4 | 22 | 157 | 29 | 148 | 3.92e-14 | 69.3 |
Msa0314690 | AT3G46840.1 | 34.416 | 154 | 80 | 6 | 8 | 157 | 11 | 147 | 6.14e-14 | 68.9 |
Msa0314690 | AT1G32960.1 | 30.827 | 133 | 78 | 4 | 25 | 157 | 30 | 148 | 9.53e-14 | 68.2 |
Msa0314690 | AT4G26330.2 | 38.384 | 99 | 50 | 2 | 59 | 157 | 13 | 100 | 1.00e-13 | 68.2 |
Msa0314690 | AT4G26330.1 | 38.144 | 97 | 49 | 2 | 59 | 155 | 13 | 98 | 2.48e-13 | 67.0 |
Msa0314690 | AT5G59090.2 | 34.815 | 135 | 71 | 4 | 23 | 157 | 28 | 145 | 2.85e-13 | 67.0 |
Msa0314690 | AT5G59090.1 | 34.815 | 135 | 71 | 4 | 23 | 157 | 28 | 145 | 2.85e-13 | 67.0 |
Msa0314690 | AT5G59100.1 | 35.294 | 136 | 67 | 4 | 24 | 157 | 31 | 147 | 3.15e-13 | 66.6 |
Msa0314690 | AT4G21323.1 | 31.206 | 141 | 85 | 3 | 17 | 157 | 70 | 198 | 6.60e-13 | 65.9 |
Msa0314690 | AT5G59810.1 | 32.090 | 134 | 78 | 4 | 28 | 157 | 42 | 166 | 1.16e-12 | 65.1 |
Msa0314690 | AT5G59120.1 | 35.252 | 139 | 71 | 4 | 20 | 157 | 24 | 144 | 2.08e-12 | 64.3 |
Msa0314690 | AT4G10550.4 | 34.343 | 99 | 53 | 3 | 59 | 157 | 8 | 94 | 3.23e-12 | 63.9 |
Msa0314690 | AT4G10550.2 | 34.343 | 99 | 53 | 3 | 59 | 157 | 8 | 94 | 3.23e-12 | 63.9 |
Msa0314690 | AT5G59090.3 | 34.815 | 135 | 69 | 5 | 23 | 157 | 28 | 143 | 1.11e-11 | 62.4 |
Msa0314690 | AT4G15040.2 | 40.708 | 113 | 45 | 5 | 48 | 157 | 14 | 107 | 1.65e-11 | 62.0 |
Msa0314690 | AT4G15040.1 | 40.708 | 113 | 45 | 5 | 48 | 157 | 14 | 107 | 1.65e-11 | 62.0 |
Msa0314690 | AT1G04110.1 | 32.051 | 156 | 85 | 4 | 11 | 157 | 6 | 149 | 2.29e-11 | 61.6 |
Msa0314690 | AT4G10510.4 | 34.343 | 99 | 53 | 3 | 59 | 157 | 8 | 94 | 2.31e-11 | 61.2 |
Msa0314690 | AT5G59190.1 | 40.000 | 120 | 53 | 4 | 41 | 157 | 3 | 106 | 2.97e-11 | 61.2 |
Msa0314690 | AT5G59130.2 | 36.885 | 122 | 63 | 6 | 7 | 122 | 12 | 125 | 6.56e-11 | 60.1 |
Msa0314690 | AT5G59130.4 | 36.885 | 122 | 63 | 6 | 7 | 122 | 12 | 125 | 7.03e-11 | 60.1 |
Msa0314690 | AT1G32940.4 | 36.458 | 96 | 49 | 3 | 62 | 157 | 11 | 94 | 7.22e-11 | 60.1 |
Msa0314690 | AT1G32940.2 | 36.458 | 96 | 49 | 3 | 62 | 157 | 11 | 94 | 7.22e-11 | 60.1 |
Find 27 sgRNAs with CRISPR-Local
Find 104 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACTTTACCTGAGAGATTAT+TGG | 0.253654 | 2_4:-10589155 | None:intergenic |
ACATCACTCTTATTTGCTTT+TGG | 0.269627 | 2_4:+10589039 | Msa0314690:CDS |
CAGGTTTATCTAGTTGAATT+TGG | 0.282454 | 2_4:+10588971 | Msa0314690:intron |
CAAGTCTCTATTTGTCTCAT+TGG | 0.326154 | 2_4:-10589461 | None:intergenic |
GAGAGATTATTGGCTTCATT+AGG | 0.377636 | 2_4:-10589145 | None:intergenic |
GAATTTGGAGAGCACAATAA+TGG | 0.382105 | 2_4:+10588986 | Msa0314690:CDS |
AGTTATAAACACACTTTCAA+TGG | 0.395631 | 2_4:+10589103 | Msa0314690:CDS |
TTGTTAGCCAAAGCAAAATA+TGG | 0.399294 | 2_4:+10589481 | Msa0314690:CDS |
CTTCCTCCTCCTCCTTCCAT+TGG | 0.427515 | 2_4:+10588839 | Msa0314690:CDS |
TATGGTCAAGATATTATAGT+AGG | 0.431882 | 2_4:+10589499 | Msa0314690:CDS |
TGTGTTTATAACTGTAAAGA+AGG | 0.440640 | 2_4:-10589093 | None:intergenic |
TTAGATATTCAAGTACACTA+TGG | 0.471206 | 2_4:+10588788 | Msa0314690:exon |
AAGAAACTGAGGACGAAGCT+AGG | 0.488704 | 2_4:+10589065 | Msa0314690:CDS |
AATGAAGCCAATAATCTCTC+AGG | 0.488976 | 2_4:+10589148 | Msa0314690:CDS |
AGACCAATGGAAGGAGGAGG+AGG | 0.501223 | 2_4:-10588842 | None:intergenic |
AGAAACTGAGGACGAAGCTA+GGG | 0.526850 | 2_4:+10589066 | Msa0314690:CDS |
TAATATGAAACAGGGATGGA+AGG | 0.530717 | 2_4:+10589331 | Msa0314690:intron |
ATAGTAGGAATGATTGATAG+TGG | 0.536363 | 2_4:+10589514 | Msa0314690:CDS |
CACAAAATTCCATGACCTTG+TGG | 0.552334 | 2_4:-10589401 | None:intergenic |
GTGTTTATAACTGTAAAGAA+GGG | 0.587597 | 2_4:-10589092 | None:intergenic |
CATTGCATACCACAAGGTCA+TGG | 0.599661 | 2_4:+10589392 | Msa0314690:CDS |
ATGAGACCAATGGAAGGAGG+AGG | 0.606732 | 2_4:-10588845 | None:intergenic |
TGGTGCATGAGACCAATGGA+AGG | 0.628951 | 2_4:-10588851 | None:intergenic |
TGAAACAGGGATGGAAGGAG+TGG | 0.644160 | 2_4:+10589336 | Msa0314690:intron |
TGCATGAGACCAATGGAAGG+AGG | 0.668327 | 2_4:-10588848 | None:intergenic |
GCAATGAGTATAACTTTGTG+TGG | 0.669423 | 2_4:-10589375 | None:intergenic |
TATACTCATTGCATACCACA+AGG | 0.724687 | 2_4:+10589386 | Msa0314690:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATTAATTAATATGAAAC+AGG | + | chr2_4:10589322-10589341 | Msa0314690:intron | 10.0% |
!! | AAATTAATTAATATGAAACA+GGG | + | chr2_4:10589323-10589342 | Msa0314690:intron | 10.0% |
!!! | TTTTTGTTATAATATATATG+TGG | - | chr2_4:10589550-10589569 | None:intergenic | 10.0% |
!!! | ATAATTTTTAAAAAAATCTC+TGG | - | chr2_4:10589606-10589625 | None:intergenic | 10.0% |
!!! | GAGATTTTTTTAAAAATTAT+AGG | + | chr2_4:10589606-10589625 | Msa0314690:intron | 10.0% |
!! | AAAATTAATTAATATGAAAC+AGG | + | chr2_4:10589322-10589341 | Msa0314690:intron | 10.0% |
!! | AAATTAATTAATATGAAACA+GGG | + | chr2_4:10589323-10589342 | Msa0314690:intron | 10.0% |
!!! | TTTTTGTTATAATATATATG+TGG | - | chr2_4:10589550-10589569 | None:intergenic | 10.0% |
!!! | ATAATTTTTAAAAAAATCTC+TGG | - | chr2_4:10589606-10589625 | None:intergenic | 10.0% |
!!! | GAGATTTTTTTAAAAATTAT+AGG | + | chr2_4:10589606-10589625 | Msa0314690:intron | 10.0% |
!! | CAAAAAATACTATAATCATA+GGG | - | chr2_4:10589650-10589669 | None:intergenic | 15.0% |
!! | CAAAAAATACTATAATCATA+GGG | - | chr2_4:10589650-10589669 | None:intergenic | 15.0% |
!! | ATCTAGGAATTCATATTTAT+TGG | + | chr2_4:10588938-10588957 | Msa0314690:intron | 20.0% |
!! | CCAAAAAATACTATAATCAT+AGG | - | chr2_4:10589651-10589670 | None:intergenic | 20.0% |
!!! | CCTATGATTATAGTATTTTT+TGG | + | chr2_4:10589648-10589667 | Msa0314690:intron | 20.0% |
!! | ATCTAGGAATTCATATTTAT+TGG | + | chr2_4:10588938-10588957 | Msa0314690:intron | 20.0% |
!! | CCAAAAAATACTATAATCAT+AGG | - | chr2_4:10589651-10589670 | None:intergenic | 20.0% |
!!! | CCTATGATTATAGTATTTTT+TGG | + | chr2_4:10589648-10589667 | Msa0314690:intron | 20.0% |
! | TTAGATATTCAAGTACACTA+TGG | + | chr2_4:10588788-10588807 | Msa0314690:exon | 25.0% |
!! | ATGAAAGACCTGATTATTTT+TGG | - | chr2_4:10588874-10588893 | None:intergenic | 25.0% |
!! | ATTTATTGGATTTTTGTCAC+AGG | + | chr2_4:10588952-10588971 | Msa0314690:intron | 25.0% |
! | GTGTTTATAACTGTAAAGAA+GGG | - | chr2_4:10589095-10589114 | None:intergenic | 25.0% |
! | TGTGTTTATAACTGTAAAGA+AGG | - | chr2_4:10589096-10589115 | None:intergenic | 25.0% |
! | AGTTATAAACACACTTTCAA+TGG | + | chr2_4:10589103-10589122 | Msa0314690:CDS | 25.0% |
! | TAATTAATATGAAACAGGGA+TGG | + | chr2_4:10589327-10589346 | Msa0314690:intron | 25.0% |
!!! | TCATTGGTTTTTTCTTCAAA+AGG | - | chr2_4:10589448-10589467 | None:intergenic | 25.0% |
! | TATGGTCAAGATATTATAGT+AGG | + | chr2_4:10589499-10589518 | Msa0314690:CDS | 25.0% |
! | TTAGATATTCAAGTACACTA+TGG | + | chr2_4:10588788-10588807 | Msa0314690:exon | 25.0% |
!! | ATGAAAGACCTGATTATTTT+TGG | - | chr2_4:10588874-10588893 | None:intergenic | 25.0% |
!! | ATTTATTGGATTTTTGTCAC+AGG | + | chr2_4:10588952-10588971 | Msa0314690:intron | 25.0% |
! | GTGTTTATAACTGTAAAGAA+GGG | - | chr2_4:10589095-10589114 | None:intergenic | 25.0% |
! | TGTGTTTATAACTGTAAAGA+AGG | - | chr2_4:10589096-10589115 | None:intergenic | 25.0% |
! | AGTTATAAACACACTTTCAA+TGG | + | chr2_4:10589103-10589122 | Msa0314690:CDS | 25.0% |
! | TAATTAATATGAAACAGGGA+TGG | + | chr2_4:10589327-10589346 | Msa0314690:intron | 25.0% |
!!! | TCATTGGTTTTTTCTTCAAA+AGG | - | chr2_4:10589448-10589467 | None:intergenic | 25.0% |
! | TATGGTCAAGATATTATAGT+AGG | + | chr2_4:10589499-10589518 | Msa0314690:CDS | 25.0% |
!!! | CATAATCATTTTTTCTCCTC+TGG | + | chr2_4:10588909-10588928 | Msa0314690:intron | 30.0% |
CAGGTTTATCTAGTTGAATT+TGG | + | chr2_4:10588971-10588990 | Msa0314690:intron | 30.0% | |
!! | ACATCACTCTTATTTGCTTT+TGG | + | chr2_4:10589039-10589058 | Msa0314690:CDS | 30.0% |
AACTTTACCTGAGAGATTAT+TGG | - | chr2_4:10589158-10589177 | None:intergenic | 30.0% | |
GCTACTTGAAAATTTGAATC+AGG | + | chr2_4:10589212-10589231 | Msa0314690:intron | 30.0% | |
TTGTTAGCCAAAGCAAAATA+TGG | + | chr2_4:10589481-10589500 | Msa0314690:CDS | 30.0% | |
! | ATCTTGACCATATTTTGCTT+TGG | - | chr2_4:10589491-10589510 | None:intergenic | 30.0% |
ATAGTAGGAATGATTGATAG+TGG | + | chr2_4:10589514-10589533 | Msa0314690:CDS | 30.0% | |
!!! | CATAATCATTTTTTCTCCTC+TGG | + | chr2_4:10588909-10588928 | Msa0314690:intron | 30.0% |
CAGGTTTATCTAGTTGAATT+TGG | + | chr2_4:10588971-10588990 | Msa0314690:intron | 30.0% | |
!! | ACATCACTCTTATTTGCTTT+TGG | + | chr2_4:10589039-10589058 | Msa0314690:CDS | 30.0% |
AACTTTACCTGAGAGATTAT+TGG | - | chr2_4:10589158-10589177 | None:intergenic | 30.0% | |
GCTACTTGAAAATTTGAATC+AGG | + | chr2_4:10589212-10589231 | Msa0314690:intron | 30.0% | |
TTGTTAGCCAAAGCAAAATA+TGG | + | chr2_4:10589481-10589500 | Msa0314690:CDS | 30.0% | |
! | ATCTTGACCATATTTTGCTT+TGG | - | chr2_4:10589491-10589510 | None:intergenic | 30.0% |
ATAGTAGGAATGATTGATAG+TGG | + | chr2_4:10589514-10589533 | Msa0314690:CDS | 30.0% | |
CTCATGCACCAAAAATAATC+AGG | + | chr2_4:10588863-10588882 | Msa0314690:CDS | 35.0% | |
ATTCCTAGATAGAAATCCAG+AGG | - | chr2_4:10588928-10588947 | None:intergenic | 35.0% | |
! | GAATTTGGAGAGCACAATAA+TGG | + | chr2_4:10588986-10589005 | Msa0314690:CDS | 35.0% |
! | GCTTTTGGTAAAAGAAACTG+AGG | + | chr2_4:10589054-10589073 | Msa0314690:CDS | 35.0% |
!! | GAGAGATTATTGGCTTCATT+AGG | - | chr2_4:10589148-10589167 | None:intergenic | 35.0% |
AATGAAGCCAATAATCTCTC+AGG | + | chr2_4:10589148-10589167 | Msa0314690:CDS | 35.0% | |
TAATATGAAACAGGGATGGA+AGG | + | chr2_4:10589331-10589350 | Msa0314690:intron | 35.0% | |
GCAATGAGTATAACTTTGTG+TGG | - | chr2_4:10589378-10589397 | None:intergenic | 35.0% | |
TATACTCATTGCATACCACA+AGG | + | chr2_4:10589386-10589405 | Msa0314690:CDS | 35.0% | |
! | ACAAGGTCATGGAATTTTGT+GGG | + | chr2_4:10589403-10589422 | Msa0314690:CDS | 35.0% |
CAAGTCTCTATTTGTCTCAT+TGG | - | chr2_4:10589464-10589483 | None:intergenic | 35.0% | |
CTCATGCACCAAAAATAATC+AGG | + | chr2_4:10588863-10588882 | Msa0314690:CDS | 35.0% | |
ATTCCTAGATAGAAATCCAG+AGG | - | chr2_4:10588928-10588947 | None:intergenic | 35.0% | |
! | GAATTTGGAGAGCACAATAA+TGG | + | chr2_4:10588986-10589005 | Msa0314690:CDS | 35.0% |
! | GCTTTTGGTAAAAGAAACTG+AGG | + | chr2_4:10589054-10589073 | Msa0314690:CDS | 35.0% |
!! | GAGAGATTATTGGCTTCATT+AGG | - | chr2_4:10589148-10589167 | None:intergenic | 35.0% |
AATGAAGCCAATAATCTCTC+AGG | + | chr2_4:10589148-10589167 | Msa0314690:CDS | 35.0% | |
TAATATGAAACAGGGATGGA+AGG | + | chr2_4:10589331-10589350 | Msa0314690:intron | 35.0% | |
GCAATGAGTATAACTTTGTG+TGG | - | chr2_4:10589378-10589397 | None:intergenic | 35.0% | |
TATACTCATTGCATACCACA+AGG | + | chr2_4:10589386-10589405 | Msa0314690:CDS | 35.0% | |
! | ACAAGGTCATGGAATTTTGT+GGG | + | chr2_4:10589403-10589422 | Msa0314690:CDS | 35.0% |
CAAGTCTCTATTTGTCTCAT+TGG | - | chr2_4:10589464-10589483 | None:intergenic | 35.0% | |
!! | TTTTTGGTGCATGAGACCAA+TGG | - | chr2_4:10588858-10588877 | None:intergenic | 40.0% |
TCTCCTCTGGATTTCTATCT+AGG | + | chr2_4:10588922-10588941 | Msa0314690:intron | 40.0% | |
CACAAAATTCCATGACCTTG+TGG | - | chr2_4:10589404-10589423 | None:intergenic | 40.0% | |
! | CACAAGGTCATGGAATTTTG+TGG | + | chr2_4:10589402-10589421 | Msa0314690:CDS | 40.0% |
! | CAAGGTCATGGAATTTTGTG+GGG | + | chr2_4:10589404-10589423 | Msa0314690:CDS | 40.0% |
!! | TTTTTGGTGCATGAGACCAA+TGG | - | chr2_4:10588858-10588877 | None:intergenic | 40.0% |
TCTCCTCTGGATTTCTATCT+AGG | + | chr2_4:10588922-10588941 | Msa0314690:intron | 40.0% | |
CACAAAATTCCATGACCTTG+TGG | - | chr2_4:10589404-10589423 | None:intergenic | 40.0% | |
! | CACAAGGTCATGGAATTTTG+TGG | + | chr2_4:10589402-10589421 | Msa0314690:CDS | 40.0% |
! | CAAGGTCATGGAATTTTGTG+GGG | + | chr2_4:10589404-10589423 | Msa0314690:CDS | 40.0% |
AAGAAACTGAGGACGAAGCT+AGG | + | chr2_4:10589065-10589084 | Msa0314690:CDS | 45.0% | |
AGAAACTGAGGACGAAGCTA+GGG | + | chr2_4:10589066-10589085 | Msa0314690:CDS | 45.0% | |
CATTGCATACCACAAGGTCA+TGG | + | chr2_4:10589392-10589411 | Msa0314690:CDS | 45.0% | |
AAGAAACTGAGGACGAAGCT+AGG | + | chr2_4:10589065-10589084 | Msa0314690:CDS | 45.0% | |
AGAAACTGAGGACGAAGCTA+GGG | + | chr2_4:10589066-10589085 | Msa0314690:CDS | 45.0% | |
CATTGCATACCACAAGGTCA+TGG | + | chr2_4:10589392-10589411 | Msa0314690:CDS | 45.0% | |
!! | ACAAAATATAAAAATTAATT+TGG | - | chr2_4:10589271-10589290 | None:intergenic | 5.0% |
!! | ACAAAATATAAAAATTAATT+TGG | - | chr2_4:10589271-10589290 | None:intergenic | 5.0% |
ATGAGACCAATGGAAGGAGG+AGG | - | chr2_4:10588848-10588867 | None:intergenic | 50.0% | |
TGCATGAGACCAATGGAAGG+AGG | - | chr2_4:10588851-10588870 | None:intergenic | 50.0% | |
TGGTGCATGAGACCAATGGA+AGG | - | chr2_4:10588854-10588873 | None:intergenic | 50.0% | |
TGAAACAGGGATGGAAGGAG+TGG | + | chr2_4:10589336-10589355 | Msa0314690:intron | 50.0% | |
ATGAGACCAATGGAAGGAGG+AGG | - | chr2_4:10588848-10588867 | None:intergenic | 50.0% | |
TGCATGAGACCAATGGAAGG+AGG | - | chr2_4:10588851-10588870 | None:intergenic | 50.0% | |
TGGTGCATGAGACCAATGGA+AGG | - | chr2_4:10588854-10588873 | None:intergenic | 50.0% | |
TGAAACAGGGATGGAAGGAG+TGG | + | chr2_4:10589336-10589355 | Msa0314690:intron | 50.0% | |
CTTCCTCCTCCTCCTTCCAT+TGG | + | chr2_4:10588839-10588858 | Msa0314690:CDS | 55.0% | |
AGACCAATGGAAGGAGGAGG+AGG | - | chr2_4:10588845-10588864 | None:intergenic | 55.0% | |
CTTCCTCCTCCTCCTTCCAT+TGG | + | chr2_4:10588839-10588858 | Msa0314690:CDS | 55.0% | |
AGACCAATGGAAGGAGGAGG+AGG | - | chr2_4:10588845-10588864 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 10588782 | 10589721 | 10588782 | ID=Msa0314690;Name=Msa0314690 |
chr2_4 | mRNA | 10588782 | 10589721 | 10588782 | ID=Msa0314690-mRNA-1;Parent=Msa0314690;Name=Msa0314690-mRNA-1;_AED=0.46;_eAED=0.46;_QI=25|0.5|0.4|0.6|1|1|5|0|163 |
chr2_4 | exon | 10588782 | 10588884 | 10588782 | ID=Msa0314690-mRNA-1:exon:4045;Parent=Msa0314690-mRNA-1 |
chr2_4 | exon | 10588974 | 10589169 | 10588974 | ID=Msa0314690-mRNA-1:exon:4046;Parent=Msa0314690-mRNA-1 |
chr2_4 | exon | 10589344 | 10589535 | 10589344 | ID=Msa0314690-mRNA-1:exon:4047;Parent=Msa0314690-mRNA-1 |
chr2_4 | exon | 10589677 | 10589683 | 10589677 | ID=Msa0314690-mRNA-1:exon:4048;Parent=Msa0314690-mRNA-1 |
chr2_4 | exon | 10589703 | 10589721 | 10589703 | ID=Msa0314690-mRNA-1:exon:4049;Parent=Msa0314690-mRNA-1 |
chr2_4 | five_prime_UTR | 10588782 | 10588806 | 10588782 | ID=Msa0314690-mRNA-1:five_prime_utr;Parent=Msa0314690-mRNA-1 |
chr2_4 | CDS | 10588807 | 10588884 | 10588807 | ID=Msa0314690-mRNA-1:cds;Parent=Msa0314690-mRNA-1 |
chr2_4 | CDS | 10588974 | 10589169 | 10588974 | ID=Msa0314690-mRNA-1:cds;Parent=Msa0314690-mRNA-1 |
chr2_4 | CDS | 10589344 | 10589535 | 10589344 | ID=Msa0314690-mRNA-1:cds;Parent=Msa0314690-mRNA-1 |
chr2_4 | CDS | 10589677 | 10589683 | 10589677 | ID=Msa0314690-mRNA-1:cds;Parent=Msa0314690-mRNA-1 |
chr2_4 | CDS | 10589703 | 10589721 | 10589703 | ID=Msa0314690-mRNA-1:cds;Parent=Msa0314690-mRNA-1 |
Gene Sequence |
Protein sequence |