AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1236990


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1236990 MtrunA17_Chr8g0347631 94.340 212 11 1 1 211 1 212 5.52e-141 392
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1236990 AT2G04039.1 63.291 158 52 3 58 210 42 198 1.04e-54 173
Msa1236990 AT2G04039.2 75.926 108 25 1 104 210 57 164 6.13e-54 170
Msa1236990 AT2G04039.3 56.757 111 42 3 58 163 42 151 6.51e-25 97.4

Find 54 sgRNAs with CRISPR-Local

Find 134 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTTACTGTTGCTGCTTT+TGG 0.124923 8_2:+16260249 None:intergenic
AAGGCAACCCCTATTCATTT+TGG 0.130826 8_2:-16259109 Msa1236990:CDS
CTTCAAAACTTATTGTCTTT+TGG 0.181488 8_2:-16258891 Msa1236990:CDS
AATAAACCAGCGACAGAAAA+TGG 0.240132 8_2:-16261034 Msa1236990:five_prime_UTR
TTCTTTCCCACAGGAATTAC+AGG 0.261997 8_2:-16259083 Msa1236990:intron
TTCTGTCGCTGGTTTATTGA+TGG 0.276406 8_2:+16261039 None:intergenic
TCTAATATTGCTTTCAATGA+AGG 0.341804 8_2:+16260168 None:intergenic
CTCATTGACTATGTGGTATA+TGG 0.382028 8_2:-16258746 Msa1236990:three_prime_UTR
AAGAAGGCCCAAAATGAATA+GGG 0.412873 8_2:+16259101 None:intergenic
AAAGAAGGCCCAAAATGAAT+AGG 0.419642 8_2:+16259100 None:intergenic
GGCTTAGCTGGAGCTTTAGC+AGG 0.433823 8_2:+16260222 None:intergenic
CACGTTTGTTGATGAATGCC+CGG 0.446871 8_2:-16258669 Msa1236990:three_prime_UTR
TTCTTCTCATCAACTAGAAA+CGG 0.449513 8_2:+16258919 None:intergenic
ATCATCACCAATACTACCTT+TGG 0.454497 8_2:-16260849 Msa1236990:intron
CTCCTCCATCATCTGAGGTA+AGG 0.455147 8_2:+16260200 None:intergenic
AATATCAGAGAGATCTTGTT+GGG 0.459022 8_2:+16260143 None:intergenic
GAATCATCTACTAGTACATC+AGG 0.476468 8_2:-16260591 Msa1236990:intron
CACAAGGGATTATTCCTGTA+TGG 0.477768 8_2:-16258849 Msa1236990:CDS
AAAACACAGAAGAATGCAAA+TGG 0.496803 8_2:-16260981 Msa1236990:exon
GAGAATCAATCTTTCCATAC+AGG 0.504256 8_2:+16258835 None:intergenic
TGTGCTTGAACAGGTCCAAA+GGG 0.506399 8_2:-16258985 Msa1236990:intron
TTTAGCTACTGCTGAAACAA+AGG 0.509101 8_2:-16260292 Msa1236990:intron
TGTAATTCCTGTGGGAAAGA+AGG 0.510749 8_2:+16259085 None:intergenic
AAAAGCAGCAACAGTAAAGA+AGG 0.515492 8_2:-16260247 Msa1236990:CDS
ATTGGTGATGATGATGAGTT+AGG 0.523459 8_2:+16260860 None:intergenic
GATGACAGAGAAAACCCCTT+TGG 0.524451 8_2:+16258970 None:intergenic
CAATATCAGAGAGATCTTGT+TGG 0.526999 8_2:+16260142 None:intergenic
ACGTTTGTTGATGAATGCCC+GGG 0.529352 8_2:-16258668 Msa1236990:three_prime_UTR
TCCTCCATCATCTGAGGTAA+GGG 0.531229 8_2:+16260201 None:intergenic
TTGTTAAGAGGTGCAGCACT+TGG 0.532380 8_2:-16260953 Msa1236990:CDS
AGATCTCTCTGATATTGAGC+TGG 0.533275 8_2:-16260136 Msa1236990:CDS
TCTCTGTCATCTTACAACTC+AGG 0.533545 8_2:-16258958 Msa1236990:CDS
AGACATACCAAAGGTAGTAT+TGG 0.536066 8_2:+16260842 None:intergenic
TTGAGAGACATGCAAAGAAG+AGG 0.542477 8_2:+16260895 None:intergenic
ACCTTGACTCATTGACTATG+TGG 0.544780 8_2:-16258753 Msa1236990:three_prime_UTR
TTGTCAGAAGCATACGTTGG+AGG 0.552359 8_2:+16261065 None:intergenic
TAAGCCCTTACCTCAGATGA+TGG 0.552759 8_2:-16260205 Msa1236990:CDS
TATTATGATTAACAGTTGGA+AGG 0.560411 8_2:-16259146 Msa1236990:intron
CAAGAACCATGTGGATCAGA+AGG 0.563549 8_2:-16261103 Msa1236990:five_prime_UTR
ATGTGCTTGAACAGGTCCAA+AGG 0.565480 8_2:-16258986 Msa1236990:intron
TACTGCTGAAACAAAGGAGG+AGG 0.583102 8_2:-16260286 Msa1236990:CDS
GTACGAAATAATCACAAACC+CGG 0.590236 8_2:+16258650 None:intergenic
TACATACCTGTAATTCCTGT+GGG 0.591415 8_2:+16259077 None:intergenic
CTTACCTCAGATGATGGAGG+AGG 0.618521 8_2:-16260199 Msa1236990:CDS
GTACATACCTGTAATTCCTG+TGG 0.624066 8_2:+16259076 None:intergenic
AGCTACTGCTGAAACAAAGG+AGG 0.625682 8_2:-16260289 Msa1236990:CDS
TACGAAATAATCACAAACCC+GGG 0.631214 8_2:+16258651 None:intergenic
ACATCCTCCTCCATCATCTG+AGG 0.640524 8_2:+16260195 None:intergenic
ACCACATAGTCAATGAGTCA+AGG 0.642220 8_2:+16258752 None:intergenic
GCCCTTACCTCAGATGATGG+AGG 0.648548 8_2:-16260202 Msa1236990:CDS
AGAAGGCCCAAAATGAATAG+GGG 0.671714 8_2:+16259102 None:intergenic
GTGCTTGAACAGGTCCAAAG+GGG 0.694256 8_2:-16258984 Msa1236990:intron
AATGAACCTTCTGATCCACA+TGG 0.715867 8_2:+16261097 None:intergenic
ATATTGTCTCAAGAACCATG+TGG 0.787556 8_2:-16261112 Msa1236990:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAAATAAAAACATATAAT+AGG - chr8_2:16258762-16258781 Msa1236990:three_prime_UTR 10.0%
!!! TTTTATTTTGTTAGTTTAAT+TGG - chr8_2:16259240-16259259 Msa1236990:intron 10.0%
!!! TTAGCTTGATTTTATAAAAT+CGG - chr8_2:16260030-16260049 Msa1236990:intron 15.0%
!!! ATGTTTAGATTTTTTATTTG+TGG - chr8_2:16260071-16260090 Msa1236990:intron 15.0%
!!! TTTATTTTTCAACTATTTTG+AGG + chr8_2:16260508-16260527 None:intergenic 15.0%
!! TCAAAATAGTTGAAAAATAA+AGG - chr8_2:16260507-16260526 Msa1236990:intron 15.0%
!! AATGAACATAATCAAAACTT+TGG - chr8_2:16259212-16259231 Msa1236990:intron 20.0%
!!! TATTATCCCATAGATATTTT+AGG - chr8_2:16259309-16259328 Msa1236990:intron 20.0%
!! AAATCAGTTATACTATTTAG+TGG + chr8_2:16259426-16259445 None:intergenic 20.0%
!! TGTGATGTAATTAAAATTTG+TGG - chr8_2:16259454-16259473 Msa1236990:intron 20.0%
!! TTCAAAATAGCATTCAAAAT+AGG + chr8_2:16259777-16259796 None:intergenic 20.0%
!!! AAAGTGAACAACTATAATTT+TGG + chr8_2:16259832-16259851 None:intergenic 20.0%
!! AAATTATAGTTGTTCACTTT+CGG - chr8_2:16259832-16259851 Msa1236990:intron 20.0%
!! TACAATTTCAAATAATTCCA+CGG - chr8_2:16260409-16260428 Msa1236990:intron 20.0%
!! TTGATATTATGATTAACAGT+TGG - chr8_2:16260620-16260639 Msa1236990:CDS 20.0%
!!! TTCAAAACTTATTGTCTTTT+GGG - chr8_2:16260880-16260899 Msa1236990:CDS 20.0%
!!! TCGTATACAAATTTTCATTT+TGG - chr8_2:16260956-16260975 Msa1236990:CDS 20.0%
! ACATAATCAAAACTTTGGTT+AGG - chr8_2:16259217-16259236 Msa1236990:intron 25.0%
! TCTAATATTGCTTTCAATGA+AGG + chr8_2:16259605-16259624 None:intergenic 25.0%
! AAAGAGAGTAATTTGAACAA+TGG + chr8_2:16259704-16259723 None:intergenic 25.0%
!!! TTGAATGCTATTTTGAAGTA+AGG - chr8_2:16259780-16259799 Msa1236990:intron 25.0%
!!! CTATAATTTTGGCGTTAAAT+TGG + chr8_2:16259821-16259840 None:intergenic 25.0%
!! AGCTAATTTTATATCACAGT+TGG + chr8_2:16260016-16260035 None:intergenic 25.0%
!!! GACCATAAACTTTTACTTTT+AGG - chr8_2:16260352-16260371 Msa1236990:intron 25.0%
! CTCCTAAAAGTAAAAGTTTA+TGG + chr8_2:16260357-16260376 None:intergenic 25.0%
! TTATCAAGAGCTTCAAATTA+TGG - chr8_2:16260568-16260587 Msa1236990:intron 25.0%
! TATTATGATTAACAGTTGGA+AGG - chr8_2:16260624-16260643 Msa1236990:CDS 25.0%
!! CTTCAAAACTTATTGTCTTT+TGG - chr8_2:16260879-16260898 Msa1236990:CDS 25.0%
AAAACACAGAAGAATGCAAA+TGG - chr8_2:16258789-16258808 Msa1236990:three_prime_UTR 30.0%
CATAAATTGAGACATACCAA+AGG + chr8_2:16258940-16258959 None:intergenic 30.0%
GACGTTCCTAAAATATCTAT+GGG + chr8_2:16259318-16259337 None:intergenic 30.0%
TGACGTTCCTAAAATATCTA+TGG + chr8_2:16259319-16259338 None:intergenic 30.0%
! TCACACTGATTAAGTATGAT+TGG - chr8_2:16259336-16259355 Msa1236990:intron 30.0%
AATATCAGAGAGATCTTGTT+GGG + chr8_2:16259630-16259649 None:intergenic 30.0%
TTAGAAGTGATCAAACAAGT+TGG - chr8_2:16259889-16259908 Msa1236990:intron 30.0%
!! AAAATCGGTTTGAAGTGAAA+CGG - chr8_2:16260045-16260064 Msa1236990:intron 30.0%
!!! TGAAACATGGTTTTGTTAGA+AGG + chr8_2:16260483-16260502 None:intergenic 30.0%
!! CTATTTTGAGGATTGAAACA+TGG + chr8_2:16260496-16260515 None:intergenic 30.0%
TTCTTCTCATCAACTAGAAA+CGG + chr8_2:16260854-16260873 None:intergenic 30.0%
ATATTGTCTCAAGAACCATG+TGG - chr8_2:16258658-16258677 Msa1236990:three_prime_UTR 35.0%
!! TTTTTGTCAGAAGCATACGT+TGG + chr8_2:16258711-16258730 None:intergenic 35.0%
AATAAACCAGCGACAGAAAA+TGG - chr8_2:16258736-16258755 Msa1236990:three_prime_UTR 35.0%
! CAAATGGCACTTTTGTTAAG+AGG - chr8_2:16258805-16258824 Msa1236990:three_prime_UTR 35.0%
!! ATTGGTGATGATGATGAGTT+AGG + chr8_2:16258913-16258932 None:intergenic 35.0%
ATCATCACCAATACTACCTT+TGG - chr8_2:16258921-16258940 Msa1236990:CDS 35.0%
AGACATACCAAAGGTAGTAT+TGG + chr8_2:16258931-16258950 None:intergenic 35.0%
GAATCATCTACTAGTACATC+AGG - chr8_2:16259179-16259198 Msa1236990:intron 35.0%
TTTAGCTACTGCTGAAACAA+AGG - chr8_2:16259478-16259497 Msa1236990:intron 35.0%
!!! TTCTTTACTGTTGCTGCTTT+TGG + chr8_2:16259524-16259543 None:intergenic 35.0%
AAAAGCAGCAACAGTAAAGA+AGG - chr8_2:16259523-16259542 Msa1236990:intron 35.0%
CAATATCAGAGAGATCTTGT+TGG + chr8_2:16259631-16259650 None:intergenic 35.0%
!!! TGATATTGAGCTGGTTTTTC+AGG - chr8_2:16259643-16259662 Msa1236990:intron 35.0%
! CTATATAACAAGGTACCCTA+TGG - chr8_2:16259751-16259770 Msa1236990:intron 35.0%
AGCATTCAAAATAGGCCATA+GGG + chr8_2:16259769-16259788 None:intergenic 35.0%
TAGCATTCAAAATAGGCCAT+AGG + chr8_2:16259770-16259789 None:intergenic 35.0%
!! ACACATACTTAGGGCATTTT+AGG + chr8_2:16259978-16259997 None:intergenic 35.0%
AAATGCCCTAAGTATGTGTT+TGG - chr8_2:16259979-16259998 Msa1236990:intron 35.0%
CTTGTCCAAACACATACTTA+GGG + chr8_2:16259987-16260006 None:intergenic 35.0%
ACTTGTCCAAACACATACTT+AGG + chr8_2:16259988-16260007 None:intergenic 35.0%
AAGTCATTGTCTTAGTTGTG+AGG + chr8_2:16260214-16260233 None:intergenic 35.0%
AAGCAATGACAAACACATAC+TGG - chr8_2:16260254-16260273 Msa1236990:CDS 35.0%
! CATCTGAGATAATGACCAAT+TGG + chr8_2:16260319-16260338 None:intergenic 35.0%
! GAAGGTTCCTTTCTGAAAAA+AGG - chr8_2:16260642-16260661 Msa1236990:CDS 35.0%
AAGAAGGCCCAAAATGAATA+GGG + chr8_2:16260672-16260691 None:intergenic 35.0%
AAAGAAGGCCCAAAATGAAT+AGG + chr8_2:16260673-16260692 None:intergenic 35.0%
TACATACCTGTAATTCCTGT+GGG + chr8_2:16260696-16260715 None:intergenic 35.0%
GGAATTGCTTTCTTAATAGC+AGG + chr8_2:16260728-16260747 None:intergenic 35.0%
CATTTAACTCGATGTAAGTG+AGG + chr8_2:16260749-16260768 None:intergenic 35.0%
TAACAACTATGTGCTTGAAC+AGG - chr8_2:16260776-16260795 Msa1236990:intron 35.0%
!!! CTTTTGGGTTGAAAAACGTT+TGG - chr8_2:16260895-16260914 Msa1236990:CDS 35.0%
GAGAATCAATCTTTCCATAC+AGG + chr8_2:16260938-16260957 None:intergenic 35.0%
! CTCATTGACTATGTGGTATA+TGG - chr8_2:16261024-16261043 Msa1236990:five_prime_UTR 35.0%
AATGAACCTTCTGATCCACA+TGG + chr8_2:16258676-16258695 None:intergenic 40.0%
!! TTCTGTCGCTGGTTTATTGA+TGG + chr8_2:16258734-16258753 None:intergenic 40.0%
! TCTATTCCATTTTCTGTCGC+TGG + chr8_2:16258745-16258764 None:intergenic 40.0%
TTGAGAGACATGCAAAGAAG+AGG + chr8_2:16258878-16258897 None:intergenic 40.0%
AGATCTCTCTGATATTGAGC+TGG - chr8_2:16259634-16259653 Msa1236990:intron 40.0%
!!! GCTGGTTTTTCAGGACAATA+AGG - chr8_2:16259652-16259671 Msa1236990:intron 40.0%
TGATTGCGAATTTGCGATCT+CGG - chr8_2:16259728-16259747 Msa1236990:intron 40.0%
CAGTGAACCATCTTGATAAG+TGG - chr8_2:16260103-16260122 Msa1236990:intron 40.0%
CTATGGACCACTTATCAAGA+TGG + chr8_2:16260113-16260132 None:intergenic 40.0%
TCTTGATAAGTGGTCCATAG+TGG - chr8_2:16260113-16260132 Msa1236990:intron 40.0%
! GATCTTCTACTTCTGAAGGA+CGG + chr8_2:16260177-16260196 None:intergenic 40.0%
CCTTCAGAAGTAGAAGATCA+CGG - chr8_2:16260178-16260197 Msa1236990:CDS 40.0%
TCTTAGTTGTGAGGATGAAG+AGG + chr8_2:16260205-16260224 None:intergenic 40.0%
TTTGCCTAACTGACACCAAT+TGG - chr8_2:16260301-16260320 Msa1236990:intron 40.0%
!! ATGACCAATTGGTGTCAGTT+AGG + chr8_2:16260308-16260327 None:intergenic 40.0%
GAAGTAACGTAAGTCATCAC+TGG - chr8_2:16260379-16260398 Msa1236990:intron 40.0%
! GCTTTTGATGCAACTGAATG+AGG + chr8_2:16260446-16260465 None:intergenic 40.0%
! AAGGCAACCCCTATTCATTT+TGG - chr8_2:16260661-16260680 Msa1236990:intron 40.0%
! AGGCAACCCCTATTCATTTT+GGG - chr8_2:16260662-16260681 Msa1236990:intron 40.0%
AGAAGGCCCAAAATGAATAG+GGG + chr8_2:16260671-16260690 None:intergenic 40.0%
TGTAATTCCTGTGGGAAAGA+AGG + chr8_2:16260688-16260707 None:intergenic 40.0%
TTCTTTCCCACAGGAATTAC+AGG - chr8_2:16260687-16260706 Msa1236990:intron 40.0%
GTACATACCTGTAATTCCTG+TGG + chr8_2:16260697-16260716 None:intergenic 40.0%
TCTCTGTCATCTTACAACTC+AGG - chr8_2:16260812-16260831 Msa1236990:intron 40.0%
AAAAACGTTTGGCAGCACAA+GGG - chr8_2:16260906-16260925 Msa1236990:CDS 40.0%
CACAAGGGATTATTCCTGTA+TGG - chr8_2:16260921-16260940 Msa1236990:CDS 40.0%
! ACCTTGACTCATTGACTATG+TGG - chr8_2:16261017-16261036 Msa1236990:five_prime_UTR 40.0%
ACCACATAGTCAATGAGTCA+AGG + chr8_2:16261021-16261040 None:intergenic 40.0%
CAAGAACCATGTGGATCAGA+AGG - chr8_2:16258667-16258686 Msa1236990:three_prime_UTR 45.0%
! TTGTCAGAAGCATACGTTGG+AGG + chr8_2:16258708-16258727 None:intergenic 45.0%
! TTGTTAAGAGGTGCAGCACT+TGG - chr8_2:16258817-16258836 Msa1236990:three_prime_UTR 45.0%
AGCTACTGCTGAAACAAAGG+AGG - chr8_2:16259481-16259500 Msa1236990:intron 45.0%
TACTGCTGAAACAAAGGAGG+AGG - chr8_2:16259484-16259503 Msa1236990:intron 45.0%
TAAGCCCTTACCTCAGATGA+TGG - chr8_2:16259565-16259584 Msa1236990:intron 45.0%
! TCCTCCATCATCTGAGGTAA+GGG + chr8_2:16259572-16259591 None:intergenic 45.0%
GCGATCTCGGCTATATAACA+AGG - chr8_2:16259741-16259760 Msa1236990:intron 45.0%
TGAGAAGTTGAGAGCTCCAA+AGG - chr8_2:16259928-16259947 Msa1236990:intron 45.0%
GAGAAGTTGAGAGCTCCAAA+GGG - chr8_2:16259929-16259948 Msa1236990:intron 45.0%
AGAAGTTGAGAGCTCCAAAG+GGG - chr8_2:16259930-16259949 Msa1236990:intron 45.0%
!! ATAAGTGGTCCATAGTGGAC+TGG - chr8_2:16260118-16260137 Msa1236990:intron 45.0%
! TTTCAAGTGCCAGTCCACTA+TGG + chr8_2:16260130-16260149 None:intergenic 45.0%
CCGTGATCTTCTACTTCTGA+AGG + chr8_2:16260181-16260200 None:intergenic 45.0%
!!! GGGGTTGCCTTTTTTCAGAA+AGG + chr8_2:16260652-16260671 None:intergenic 45.0%
ATGTGCTTGAACAGGTCCAA+AGG - chr8_2:16260784-16260803 Msa1236990:intron 45.0%
TGTGCTTGAACAGGTCCAAA+GGG - chr8_2:16260785-16260804 Msa1236990:intron 45.0%
GATGACAGAGAAAACCCCTT+TGG + chr8_2:16260803-16260822 None:intergenic 45.0%
GAAAAACGTTTGGCAGCACA+AGG - chr8_2:16260905-16260924 Msa1236990:CDS 45.0%
! CACGTTTGTTGATGAATGCC+CGG - chr8_2:16261101-16261120 Msa1236990:five_prime_UTR 45.0%
! ACGTTTGTTGATGAATGCCC+GGG - chr8_2:16261102-16261121 Msa1236990:five_prime_UTR 45.0%
! ATCTGAGGTAAGGGCTTAGC+TGG + chr8_2:16259563-16259582 None:intergenic 50.0%
! CTCCTCCATCATCTGAGGTA+AGG + chr8_2:16259573-16259592 None:intergenic 50.0%
!! CTTACCTCAGATGATGGAGG+AGG - chr8_2:16259571-16259590 Msa1236990:intron 50.0%
ACATCCTCCTCCATCATCTG+AGG + chr8_2:16259578-16259597 None:intergenic 50.0%
GAAGTTGAGAGCTCCAAAGG+GGG - chr8_2:16259931-16259950 Msa1236990:intron 50.0%
TTTGAGCTCCTAACCCCCTT+TGG + chr8_2:16259947-16259966 None:intergenic 50.0%
ATGAGGCAACTTCTACACCG+TGG + chr8_2:16260429-16260448 None:intergenic 50.0%
! TTTTGGGCCTTCTTTCCCAC+AGG - chr8_2:16260678-16260697 Msa1236990:intron 50.0%
GTGCTTGAACAGGTCCAAAG+GGG - chr8_2:16260786-16260805 Msa1236990:intron 50.0%
! GGCTTAGCTGGAGCTTTAGC+AGG + chr8_2:16259551-16259570 None:intergenic 55.0%
! GCCCTTACCTCAGATGATGG+AGG - chr8_2:16259568-16259587 Msa1236990:intron 55.0%
TGAGAGCTCCAAAGGGGGTT+AGG - chr8_2:16259936-16259955 Msa1236990:intron 55.0%
TCTGAAGGACGGAGAGTCGT+TGG + chr8_2:16260166-16260185 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 16258653 16261139 16258653 ID=Msa1236990;Name=Msa1236990
chr8_2 mRNA 16258653 16261139 16258653 ID=Msa1236990-mRNA-1;Parent=Msa1236990;Name=Msa1236990-mRNA-1;_AED=0.03;_eAED=0.03;_QI=149|1|1|1|1|1|5|187|211
chr8_2 exon 16258653 16258994 16258653 ID=Msa1236990-mRNA-1:exon:6064;Parent=Msa1236990-mRNA-1
chr8_2 exon 16259084 16259153 16259084 ID=Msa1236990-mRNA-1:exon:6063;Parent=Msa1236990-mRNA-1
chr8_2 exon 16260119 16260309 16260119 ID=Msa1236990-mRNA-1:exon:6062;Parent=Msa1236990-mRNA-1
chr8_2 exon 16260592 16260670 16260592 ID=Msa1236990-mRNA-1:exon:6061;Parent=Msa1236990-mRNA-1
chr8_2 exon 16260850 16261139 16260850 ID=Msa1236990-mRNA-1:exon:6060;Parent=Msa1236990-mRNA-1
chr8_2 five_prime_UTR 16260991 16261139 16260991 ID=Msa1236990-mRNA-1:five_prime_utr;Parent=Msa1236990-mRNA-1
chr8_2 CDS 16260850 16260990 16260850 ID=Msa1236990-mRNA-1:cds;Parent=Msa1236990-mRNA-1
chr8_2 CDS 16260592 16260670 16260592 ID=Msa1236990-mRNA-1:cds;Parent=Msa1236990-mRNA-1
chr8_2 CDS 16260119 16260309 16260119 ID=Msa1236990-mRNA-1:cds;Parent=Msa1236990-mRNA-1
chr8_2 CDS 16259084 16259153 16259084 ID=Msa1236990-mRNA-1:cds;Parent=Msa1236990-mRNA-1
chr8_2 CDS 16258840 16258994 16258840 ID=Msa1236990-mRNA-1:cds;Parent=Msa1236990-mRNA-1
chr8_2 three_prime_UTR 16258653 16258839 16258653 ID=Msa1236990-mRNA-1:three_prime_utr;Parent=Msa1236990-mRNA-1
Gene Sequence

>Msa1236990

ATGCAAATGGCACTTTTGTTAAGAGGTGCAGCACTTGGAGATTCTAGCTTTCGTTTGTGTTCTATATCTTCAACCTCTTCTTTGCATGTCTCTCAAAATGTTGTCATACCTAACTCATCATCATCACCAATACTACCTTTGATTGCAAGTAGATTTAAAGCAGTAAGCAGAAACAAGATTACTTGCTCTGCAGTTCAAGAATCATCTACTAGTACATCAGCTACTGCTGAAACAAAGGAGGAGGTTAAAGCAGAAGCTCCAAAAGCAGCAACAGTAAAGAAGGCTCCTGCTAAAGCTCCAGCTAAGCCCTTACCTCAGATGATGGAGGAGGATGTGATTCCTTCATTGAAAGCAATATTAGAAGCCCAACAAGATCTCTCTGATATTGAGCTGGTTTTTCAGGACAATAAGTTGGAAGGTTCCTTTCTGAAAAAAGGCAACCCCTATTCATTTTGGGCCTTCTTTCCCACAGGAATTACAGGTCCAAAGGGGTTTTCTCTGTCATCTTACAACTCAGGAGCAAGCACTGTTGAACCGTTTCTAGTTGATGAGAAGAAAGTTACTTCAAAACTTATTGTCTTTTGGGTTGAAAAACGTTTGGCAGCACAAGGGATTATTCCTGTATGGAAAGATTGA

Protein sequence

>Msa1236990

MQMALLLRGAALGDSSFRLCSISSTSSLHVSQNVVIPNSSSSPILPLIASRFKAVSRNKITCSAVQESSTSTSATAETKEEVKAEAPKAATVKKAPAKAPAKPLPQMMEEDVIPSLKAILEAQQDLSDIELVFQDNKLEGSFLKKGNPYSFWAFFPTGITGPKGFSLSSYNSGASTVEPFLVDEKKVTSKLIVFWVEKRLAAQGIIPVWKD*