AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0060080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0060080 MtrunA17_Chr1g0159621 94.554 1010 35 3 1 991 1 1009 0.0 1968
Msa0060080 MtrunA17_Chr3g0125211 67.316 976 260 10 50 991 30 980 0.0 1295
Msa0060080 MtrunA17_Chr4g0039281 42.202 327 161 7 686 990 197 517 6.89e-72 248
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0060080 AT1G21640.1 60.223 988 331 10 30 991 34 985 0.0 1171
Msa0060080 AT1G21640.2 59.381 1002 331 11 30 991 34 999 0.0 1161
Msa0060080 AT3G21070.2 43.119 327 158 7 686 990 201 521 5.09e-74 254
Msa0060080 AT3G21070.1 42.943 333 156 8 686 990 150 476 9.87e-74 252
Msa0060080 AT3G21070.3 43.119 327 158 7 686 990 279 599 7.28e-73 253
Msa0060080 AT3G21070.4 37.037 108 65 3 686 790 279 386 5.48e-12 69.3

Find 242 sgRNAs with CRISPR-Local

Find 527 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAGGAGAAATTCCATTTA+AGG 0.117499 1_2:+17666849 None:intergenic
GATAAAATAGTTTCTGTTCT+TGG 0.162840 1_2:-17667789 Msa0060080:CDS
GAAATTCTTACCGCAATTTA+AGG 0.173847 1_2:-17666671 Msa0060080:CDS
GCTTGATTCGCTGCCTAAAT+TGG 0.187801 1_2:-17662676 Msa0060080:CDS
TTCTGCTCGATTAGAATTAA+AGG 0.198861 1_2:-17663064 Msa0060080:intron
TTTGGGATAATAATAAATTT+TGG 0.224648 1_2:+17670363 None:intergenic
AAGGCTTCATTCTGCATTAA+TGG 0.226394 1_2:-17667889 Msa0060080:CDS
CAAGGTAATGCAGCCTTAAA+TGG 0.229895 1_2:-17666862 Msa0060080:CDS
GTGGGTCCTGATAGTTTAAA+TGG 0.235665 1_2:-17666595 Msa0060080:CDS
GGAAAAGATCCTTCCTTATC+AGG 0.258160 1_2:+17666832 None:intergenic
GTCCTACACTATTTGCTAAT+TGG 0.269632 1_2:-17667482 Msa0060080:CDS
TTTAACAACAGCACATTCTT+TGG 0.278780 1_2:+17666136 None:intergenic
CTTGCCAGAATTCCAGGTTT+TGG 0.283366 1_2:-17665750 Msa0060080:CDS
CCTTGTATCATGACTGTAAA+AGG 0.285238 1_2:+17665716 None:intergenic
GTCGTGGAGGGGACCAGTTC+CGG 0.285693 1_2:-17667961 Msa0060080:CDS
CAAGCCTCTCGTTCCAATTT+AGG 0.290109 1_2:+17662663 None:intergenic
GCGTTACTTCTAGCATCTTC+TGG 0.291203 1_2:+17662824 None:intergenic
AAAGGTCACGGAATCTTCTT+TGG 0.291776 1_2:-17666209 Msa0060080:CDS
TGACACTCACTTTGGTTATA+AGG 0.293938 1_2:+17664354 None:intergenic
AGGCATATTGTAGGATCTTT+AGG 0.296902 1_2:-17667920 Msa0060080:CDS
AACAATATGCACGGAACGTT+TGG 0.298253 1_2:+17663138 None:intergenic
AAATCTCCAAGGCTTGAAAA+TGG 0.303424 1_2:-17666385 Msa0060080:CDS
AAAGAAAGCTGAGATGTTCT+TGG 0.308420 1_2:-17666263 Msa0060080:CDS
AAGAATGTCTGCTATGATTC+TGG 0.319807 1_2:-17667531 Msa0060080:CDS
ATTGTCATCGACCGTAATTT+CGG 0.320404 1_2:+17666540 None:intergenic
TTGGCTTCCATTGTAAAGAT+AGG 0.325479 1_2:-17662538 Msa0060080:three_prime_UTR
AATTCTAATCGAGCAGAATC+TGG 0.332072 1_2:+17663069 None:intergenic
CAATTTAAGGACATGGCTAT+TGG 0.337248 1_2:-17666658 Msa0060080:CDS
GATGCAACATGCAGTTCTAT+TGG 0.337717 1_2:-17666931 Msa0060080:CDS
GGCAGGGACGATGTTCTTAC+TGG 0.338007 1_2:-17667741 Msa0060080:CDS
TTGTCATCGACCGTAATTTC+GGG 0.343242 1_2:+17666541 None:intergenic
GCTGATCCATTTAAACTATC+AGG 0.343657 1_2:+17666589 None:intergenic
GATGTACTTGCCAGAATTCC+AGG 0.343709 1_2:-17665756 Msa0060080:CDS
TTCATAGCAAGGAAGGAGTT+TGG 0.361927 1_2:-17667149 Msa0060080:CDS
CACCTTCGGGCTTGACTCTC+CGG 0.365207 1_2:-17669998 Msa0060080:intron
ATCTGGAGAGCCCGAAATTA+CGG 0.366087 1_2:-17666551 Msa0060080:CDS
CAATGAGGTGGTTGTTGATC+GGG 0.368521 1_2:-17664423 Msa0060080:CDS
ATTTGATAATTGACATAATC+GGG 0.377033 1_2:+17666703 None:intergenic
GGTGCAGTCATAACTTCAAC+TGG 0.379017 1_2:+17667237 None:intergenic
AAATCCAAAACCTGGAATTC+TGG 0.379669 1_2:+17665746 None:intergenic
AAAGCTTGGGGACGAACTAT+TGG 0.380081 1_2:-17666113 Msa0060080:CDS
TCGTGGAGGGGACCAGTTCC+GGG 0.380564 1_2:-17667960 Msa0060080:CDS
AGAAAGATCCTCCCTCAAAA+AGG 0.381684 1_2:-17666980 Msa0060080:CDS
CTCGCAACCTGTTCCATTGT+TGG 0.385256 1_2:+17667216 None:intergenic
CGTAAAGGTAAAGCAATTCC+AGG 0.385617 1_2:-17664464 Msa0060080:CDS
GACAGTGAATGTGGACAGAT+AGG 0.388238 1_2:+17663111 None:intergenic
GATTTGATAATTGACATAAT+CGG 0.389848 1_2:+17666702 None:intergenic
AAATGGAATTTCTCCTGATA+AGG 0.390422 1_2:-17666845 Msa0060080:CDS
TCATTCTCTCTTGGTGATGA+AGG 0.402302 1_2:+17665805 None:intergenic
CATTCAATCTTTGAAAGGTA+TGG 0.404554 1_2:+17664392 None:intergenic
ATGTCAATTATCAAATCAAA+AGG 0.408195 1_2:-17666696 Msa0060080:CDS
GCATTATGCAATCCGTTGAC+TGG 0.408333 1_2:-17667864 Msa0060080:CDS
GATTAACCCTTTAAAAGCTC+AGG 0.408731 1_2:-17666794 Msa0060080:CDS
GACAATCAAAAGTCTGTGAA+TGG 0.413979 1_2:-17666523 Msa0060080:CDS
CGTCGTCAACGGGAGTTGTA+AGG 0.414483 1_2:-17666297 Msa0060080:CDS
GTTAACAAGTTTGACCAAAC+AGG 0.420760 1_2:-17662713 Msa0060080:CDS
CTAACGTGGTTACTAGATAA+AGG 0.422106 1_2:-17667366 Msa0060080:CDS
GTTTCCAATGGTACTATTGT+GGG 0.424786 1_2:-17666613 Msa0060080:CDS
CGCAGAGATTAGCGAGATTG+AGG 0.428348 1_2:-17667688 Msa0060080:CDS
TTTCATCTCGCTTCTGAAAA+CGG 0.431248 1_2:+17667647 None:intergenic
AGAATGTGATAACATGTTAG+AGG 0.432134 1_2:+17667044 None:intergenic
CATCTGCTATGGTGTCTAGA+TGG 0.435337 1_2:-17667122 Msa0060080:CDS
GGTGGTGGAGGTAACATGTC+AGG 0.436442 1_2:+17670384 None:intergenic
AACAATAGATTCCTAGGCTT+GGG 0.441120 1_2:-17670114 Msa0060080:CDS
GAACGAGAGGCTTGATCAAA+AGG 0.441229 1_2:-17662654 Msa0060080:CDS
CAATAACATTCATTCTCTCT+TGG 0.441399 1_2:+17665796 None:intergenic
TGCGGAACCAATCACCTGTT+TGG 0.443313 1_2:+17662699 None:intergenic
CTAATCTCTGCGTCAAGAAA+GGG 0.444051 1_2:+17667699 None:intergenic
AGTTTGACCAAACAGGTGAT+TGG 0.449654 1_2:-17662706 Msa0060080:CDS
ATGTTCTTGGTTCGGACAGA+TGG 0.453009 1_2:-17666250 Msa0060080:CDS
GACTGCACCAACAATGGAAC+AGG 0.453609 1_2:-17667223 Msa0060080:CDS
AGATTCCTAGGCTTGGGCCT+GGG 0.454070 1_2:-17670108 Msa0060080:CDS
AATCTATTGTTGGTGAAGAA+TGG 0.454504 1_2:+17670126 None:intergenic
TTCACCAACAATAGATTCCT+AGG 0.456446 1_2:-17670120 Msa0060080:CDS
TAATGCAGAATGAAGCCTTT+CGG 0.457413 1_2:+17667893 None:intergenic
GATATGTGTGCGTCGTCAAC+GGG 0.459074 1_2:-17666307 Msa0060080:CDS
AAAAGCTCAGGTTCCTCCTC+CGG 0.459446 1_2:-17666782 Msa0060080:CDS
AGGATATCAAATACTTTCCC+TGG 0.460707 1_2:+17664446 None:intergenic
GGAAAGGAAGAAGGATACTA+AGG 0.463261 1_2:-17670071 Msa0060080:CDS
AAGCTGAGATGTTCTTGGTT+CGG 0.463480 1_2:-17666258 Msa0060080:CDS
TCTAGTAGGACAACAGTAAA+CGG 0.468135 1_2:-17666487 Msa0060080:CDS
GCTCATGTTGATCATCCATC+TGG 0.468145 1_2:-17666568 Msa0060080:CDS
GTGAACGATGCTATTTCATC+TGG 0.471293 1_2:-17667282 Msa0060080:CDS
ATACTAGCATTATATTGCAT+TGG 0.471495 1_2:-17662557 Msa0060080:three_prime_UTR
GCTAATCTCTGCGTCAAGAA+AGG 0.471633 1_2:+17667698 None:intergenic
TCAATGAGGTGGTTGTTGAT+CGG 0.473844 1_2:-17664424 Msa0060080:CDS
CAACAATAGATTCCTAGGCT+TGG 0.475256 1_2:-17670115 Msa0060080:CDS
ATTAGCAAATAGTGTAGGAC+AGG 0.475860 1_2:+17667485 None:intergenic
ACTGCATATTCTACGGCTGC+TGG 0.476774 1_2:-17664142 Msa0060080:CDS
GCTTTACGCGATGAAGAGTT+GGG 0.476938 1_2:-17666343 Msa0060080:CDS
AGCTTTACGCGATGAAGAGT+TGG 0.477808 1_2:-17666344 Msa0060080:CDS
TGTTTCCAATGGTACTATTG+TGG 0.479120 1_2:-17666614 Msa0060080:CDS
TTTAAGCTCCGATCATCATC+AGG 0.480457 1_2:+17667579 None:intergenic
CAAGGTGATGGAGTCATTGT+TGG 0.482346 1_2:-17664181 Msa0060080:CDS
ACGCACACATATCGCCTTCA+AGG 0.482866 1_2:+17666317 None:intergenic
ATGATCGGAGCTTAAATGTA+TGG 0.483058 1_2:-17667572 Msa0060080:CDS
TCCTTGCTATGAAGATAGAT+AGG 0.483132 1_2:+17667159 None:intergenic
GCAAGTACATCATGCACATC+AGG 0.487460 1_2:+17665768 None:intergenic
ATGGTGTCTACATTACTCTT+AGG 0.489278 1_2:-17664511 Msa0060080:CDS
GTTCATGTCTTTCAGGTACA+AGG 0.490225 1_2:-17664199 Msa0060080:intron
CATAGCATTCAATCTTTGAA+AGG 0.491325 1_2:+17664387 None:intergenic
CCACAAAATCTACTTTCTCA+TGG 0.493285 1_2:+17665600 None:intergenic
TGGCTTCCATTGTAAAGATA+GGG 0.493982 1_2:-17662537 Msa0060080:three_prime_UTR
AACGCGTGGGTCTCGTTCGA+TGG 0.496395 1_2:-17662806 Msa0060080:CDS
TGATAGATCATGGGATTGGA+AGG 0.500969 1_2:+17667989 None:intergenic
AGTTTCTGTTCTTGGATGCA+TGG 0.501044 1_2:-17667781 Msa0060080:CDS
CTTACCGCAATTTAAGGACA+TGG 0.501593 1_2:-17666665 Msa0060080:CDS
CTGAAGTCGAGGCATATTGT+AGG 0.503127 1_2:-17667929 Msa0060080:CDS
CTCAGCAACAGATGCTTATG+TGG 0.506563 1_2:-17666168 Msa0060080:CDS
GACTTAAGACAAGTCATTCA+CGG 0.506567 1_2:-17664548 Msa0060080:CDS
GATGCTCACTCATATGTATC+CGG 0.508423 1_2:+17662747 None:intergenic
AGTATCAAAGGAAAGGAAGA+AGG 0.510086 1_2:-17670080 Msa0060080:CDS
ACAATCAAAAGTCTGTGAAT+GGG 0.511700 1_2:-17666522 Msa0060080:CDS
CATTATGCAATCCGTTGACT+GGG 0.511984 1_2:-17667863 Msa0060080:CDS
TCAGCAATATCACCCGGAAC+TGG 0.514753 1_2:+17667948 None:intergenic
TAGATTCCTAGGCTTGGGCC+TGG 0.516049 1_2:-17670109 Msa0060080:CDS
GGAATGCTTCTAGTTCTAGT+AGG 0.516272 1_2:-17666501 Msa0060080:CDS
CAAGCCTAGGAATCTATTGT+TGG 0.519309 1_2:+17670116 None:intergenic
TCTCAAGAGGAGACTCAGTC+CGG 0.520016 1_2:-17662766 Msa0060080:CDS
TTTAAGAAAGCAATAAATTG+TGG 0.521143 1_2:-17662388 Msa0060080:three_prime_UTR
GAAGAGTTGGGATCCCTTGA+AGG 0.521799 1_2:-17666331 Msa0060080:CDS
CAGGCATTAAATAATTCTGA+AGG 0.522487 1_2:+17667598 None:intergenic
CGATATGTGTGCGTCGTCAA+CGG 0.524377 1_2:-17666308 Msa0060080:CDS
TCCTTTGATACTCAAAGCCC+AGG 0.525339 1_2:+17670091 None:intergenic
GAAAATGGAACAGTCAAGGC+CGG 0.525663 1_2:-17666370 Msa0060080:CDS
GAAATTGTCTCTTACAGTCT+CGG 0.527981 1_2:+17667317 None:intergenic
TATCCCTCGTGAACAAAGGC+AGG 0.528597 1_2:-17667758 Msa0060080:CDS
GTAATTTCGGGCTCTCCAGA+TGG 0.529696 1_2:+17666553 None:intergenic
GTCATTGTTGGAACTCCTAC+GGG 0.534827 1_2:-17664169 Msa0060080:CDS
TACGGCTGCTGGAGGTTCCA+TGG 0.536543 1_2:-17664131 Msa0060080:intron
AGATGAAATAGCATCGTTCA+CGG 0.537270 1_2:+17667284 None:intergenic
AAATAGCTCTGCAAAACTGC+AGG 0.538113 1_2:-17667019 Msa0060080:CDS
AGGACCCACAATAGTACCAT+TGG 0.538672 1_2:+17666609 None:intergenic
CGTCCCTGCCTTTGTTCACG+AGG 0.538884 1_2:+17667754 None:intergenic
ACAGTGAATGTGGACAGATA+GGG 0.540155 1_2:+17663112 None:intergenic
GTCTTTCAGGTACAAGGTGA+TGG 0.540615 1_2:-17664193 Msa0060080:intron
TGGTCAAACTTGTTAACAGT+TGG 0.545206 1_2:+17662719 None:intergenic
TCAAGGGGAATTACATTACA+TGG 0.545720 1_2:-17666458 Msa0060080:CDS
GAATGTGATAACATGTTAGA+GGG 0.546145 1_2:+17667045 None:intergenic
TCGCTTCTGAAAACGGCAAG+TGG 0.547859 1_2:+17667654 None:intergenic
GCCTGGGCTTTGAGTATCAA+AGG 0.548004 1_2:-17670092 Msa0060080:CDS
TTCTGAAAACGGCAAGTGGA+GGG 0.548295 1_2:+17667658 None:intergenic
ATGTTACAGATAGCAGCAAA+AGG 0.548480 1_2:-17667182 Msa0060080:CDS
GGAATGTAGCGTCTCGTATG+AGG 0.551593 1_2:-17667841 Msa0060080:CDS
ATTTAATGCCTGATGATGAT+CGG 0.551924 1_2:-17667587 Msa0060080:CDS
GCAGAATCTGGAAGTATGAC+AGG 0.553043 1_2:+17663081 None:intergenic
CAAAGCCCAGGCCCAAGCCT+AGG 0.554328 1_2:+17670103 None:intergenic
AGAGAGAATGAATGTTATTG+TGG 0.554789 1_2:-17665793 Msa0060080:CDS
GCCTATCTATCTTCATAGCA+AGG 0.556380 1_2:-17667160 Msa0060080:CDS
GGGAAGTACTGCATATTCTA+CGG 0.557056 1_2:-17664149 Msa0060080:CDS
GTCTGCACAAATCCAAAACC+TGG 0.557507 1_2:+17665738 None:intergenic
AGTCATTGTTGGAACTCCTA+CGG 0.557721 1_2:-17664170 Msa0060080:CDS
GGAATTTCTCCTGATAAGGA+AGG 0.557805 1_2:-17666841 Msa0060080:CDS
AAGAAAGGGGTTCATAATTG+AGG 0.558581 1_2:+17667713 None:intergenic
TGTCAATTATCAAATCAAAA+GGG 0.561271 1_2:-17666695 Msa0060080:CDS
GTATGTAGTTTGACGACTAC+AGG 0.561542 1_2:-17664574 Msa0060080:intron
AGTTATGACTGCACCAACAA+TGG 0.561997 1_2:-17667229 Msa0060080:CDS
TTGGAAAAGATATCCGGAGG+AGG 0.566248 1_2:+17666769 None:intergenic
GGCAAACCCTATCTTTACAA+TGG 0.567433 1_2:+17662531 None:intergenic
GGTGGTCAGGTAACAGAAGA+AGG 0.568302 1_2:-17667390 Msa0060080:CDS
TTCTTCTTCTAAAGAAGACA+CGG 0.570642 1_2:-17667445 Msa0060080:CDS
AGAAGACAACAGCTCTCAAG+AGG 0.570976 1_2:-17662779 Msa0060080:CDS
ATCTATCTTCATAGCAAGGA+AGG 0.571744 1_2:-17667156 Msa0060080:CDS
AAACTTGTTAACAGTTGGAA+GGG 0.572633 1_2:+17662724 None:intergenic
GGCTTTGAGTATCAAAGGAA+AGG 0.573563 1_2:-17670087 Msa0060080:CDS
CAAACTTGTTAACAGTTGGA+AGG 0.574187 1_2:+17662723 None:intergenic
AGCATCTGTTGCTGAGTGCT+AGG 0.576041 1_2:+17666175 None:intergenic
ATATGCACGGAACGTTTGGA+TGG 0.577570 1_2:+17663142 None:intergenic
AATGAGGTGGTTGTTGATCG+GGG 0.579010 1_2:-17664422 Msa0060080:CDS
ACGCTACATTCCCCAGTCAA+CGG 0.582989 1_2:+17667852 None:intergenic
AACTTGTTAACAGTTGGAAG+GGG 0.584585 1_2:+17662725 None:intergenic
CAGTGAATGTGGACAGATAG+GGG 0.586339 1_2:+17663113 None:intergenic
ACAGTAAACGGATCAAGTCA+AGG 0.588409 1_2:-17666475 Msa0060080:CDS
AGAAGAAGTTGAATGAACTA+CGG 0.588609 1_2:+17670176 None:intergenic
GAAGGTGAATGAAAATGACT+TGG 0.590526 1_2:+17670014 None:intergenic
CTTCTGAAAACGGCAAGTGG+AGG 0.591574 1_2:+17667657 None:intergenic
AAGGGCAACATGTAAACTCT+CGG 0.591706 1_2:+17667617 None:intergenic
CACGGAAATACTTCACGAGA+TGG 0.591942 1_2:-17664530 Msa0060080:CDS
CAGTAAACGGATCAAGTCAA+GGG 0.592433 1_2:-17666474 Msa0060080:CDS
ATCTATCAAAATTGTCGTGG+AGG 0.592616 1_2:-17667974 Msa0060080:CDS
GGAGTCTGAAGAATTAGAAA+CGG 0.593217 1_2:-17667424 Msa0060080:CDS
AAAATGGAACAGTCAAGGCC+GGG 0.593920 1_2:-17666369 Msa0060080:CDS
GTCGTCAACGGGAGTTGTAA+GGG 0.596339 1_2:-17666296 Msa0060080:CDS
TCTATCAAAATTGTCGTGGA+GGG 0.596698 1_2:-17667973 Msa0060080:CDS
AAGAGACAATTTCTATCAAG+CGG 0.601979 1_2:-17667307 Msa0060080:CDS
GTCCCTGCCTTTGTTCACGA+GGG 0.602787 1_2:+17667755 None:intergenic
GGAGATGTGGTTGTTTCCAA+TGG 0.604328 1_2:-17666625 Msa0060080:CDS
CAACAATGGAACAGGTTGCG+AGG 0.605355 1_2:-17667215 Msa0060080:CDS
CGCACACATATCGCCTTCAA+GGG 0.605429 1_2:+17666318 None:intergenic
GGTCTAAATGACAGTGAATG+TGG 0.605581 1_2:+17663102 None:intergenic
ATTCACAACGGCAGAGACGT+CGG 0.606609 1_2:+17666429 None:intergenic
AGTTTGGAGATCATCTGCTA+TGG 0.609973 1_2:-17667133 Msa0060080:CDS
CTATCAAAATTGTCGTGGAG+GGG 0.610398 1_2:-17667972 Msa0060080:CDS
ATGATCTATCAAAATTGTCG+TGG 0.611392 1_2:-17667977 Msa0060080:CDS
GGGACGATGTTCTTACTGGA+AGG 0.612837 1_2:-17667737 Msa0060080:CDS
GTAAAGATAGGGTTTGCCAA+TGG 0.613072 1_2:-17662526 Msa0060080:three_prime_UTR
ATGGCTATTGGAAGACGTGA+AGG 0.614015 1_2:-17666646 Msa0060080:CDS
ATGTAACAACAAAATCTCCA+AGG 0.614207 1_2:-17666396 Msa0060080:CDS
GCATATTCTACGGCTGCTGG+AGG 0.614349 1_2:-17664139 Msa0060080:CDS
AGGCATTAAATAATTCTGAA+GGG 0.616351 1_2:+17667599 None:intergenic
ATTTGATATCCTCAATGAGG+TGG 0.621324 1_2:-17664435 Msa0060080:CDS
GTAAAGGTAAAGCAATTCCA+GGG 0.621381 1_2:-17664463 Msa0060080:CDS
GCTGCCTAAATTGGAACGAG+AGG 0.621399 1_2:-17662667 Msa0060080:CDS
TAATCTCTGCGTCAAGAAAG+GGG 0.622731 1_2:+17667700 None:intergenic
GCTTGAAAATGGAACAGTCA+AGG 0.623908 1_2:-17666374 Msa0060080:CDS
GATCAACAACCACCTCATTG+AGG 0.631885 1_2:+17664426 None:intergenic
GAAGAGTTTGAGAACAAACA+TGG 0.631926 1_2:+17670150 None:intergenic
AAGGTTAAATGACACAATAG+GGG 0.632745 1_2:+17665517 None:intergenic
GGATCTTTAGGAACTCCGAA+AGG 0.635393 1_2:-17667908 Msa0060080:CDS
TACCGGAGAGTCAAGCCCGA+AGG 0.636841 1_2:+17669996 None:intergenic
ATGGTATCCCTCGTGAACAA+AGG 0.637915 1_2:-17667762 Msa0060080:CDS
GGGTGATATTGCTGAAGTCG+AGG 0.638757 1_2:-17667940 Msa0060080:CDS
CCGATGTAAAACTCTTAACA+CGG 0.639133 1_2:+17662309 None:intergenic
CTGCTATGGTGTCTAGATGG+AGG 0.639306 1_2:-17667119 Msa0060080:CDS
GGTAGTTGAACTAACACCAA+TGG 0.642866 1_2:-17670223 Msa0060080:exon
ATCGGAGCTTAAATGTATGG+AGG 0.646616 1_2:-17667569 Msa0060080:CDS
TTGTACTAGAGAAAAGGTCA+CGG 0.651293 1_2:-17666221 Msa0060080:CDS
ATGTGATAACATGTTAGAGG+GGG 0.656764 1_2:+17667047 None:intergenic
ATCCCTCGTGAACAAAGGCA+GGG 0.658686 1_2:-17667757 Msa0060080:CDS
AATGTGATAACATGTTAGAG+GGG 0.659803 1_2:+17667046 None:intergenic
TTCATCGCGTAAAGCTAACC+CGG 0.661753 1_2:+17666351 None:intergenic
ATAGCCATGTCCTTAAATTG+CGG 0.663244 1_2:+17666661 None:intergenic
GTGCAGTCATAACTTCAACT+GGG 0.663724 1_2:+17667238 None:intergenic
AGTATTTGATATCCTCAATG+AGG 0.664737 1_2:-17664438 Msa0060080:CDS
TCGACTTCAGCAATATCACC+CGG 0.665510 1_2:+17667942 None:intergenic
GAATATGCAGTACTTCCCGT+AGG 0.667616 1_2:+17664154 None:intergenic
AGATGCTAGAAGTAACGCGT+GGG 0.672147 1_2:-17662819 Msa0060080:CDS
ATGTCGATACATGCTACCAT+TGG 0.674166 1_2:+17670207 None:intergenic
TGATAATTGACATAATCGGG+AGG 0.681483 1_2:+17666706 None:intergenic
AAGATGCTAGAAGTAACGCG+TGG 0.681498 1_2:-17662820 Msa0060080:CDS
AATGGTAGCATGTATCGACA+TGG 0.683537 1_2:-17670205 Msa0060080:CDS
TGGAAGACGTGAAGGAGATG+TGG 0.685338 1_2:-17666638 Msa0060080:CDS
CACCAATTAGCAAATAGTGT+AGG 0.686349 1_2:+17667480 None:intergenic
ATAGGGGTAAACAATATGCA+CGG 0.689744 1_2:+17663129 None:intergenic
AGTAAACGGATCAAGTCAAG+GGG 0.695048 1_2:-17666473 Msa0060080:CDS
AGGTTAAATGACACAATAGG+GGG 0.696511 1_2:+17665518 None:intergenic
AAGTATGATGAGAAAACACA+AGG 0.702953 1_2:-17666880 Msa0060080:CDS
CAGGGATAACCCTCACCACG+AGG 0.704430 1_2:+17667504 None:intergenic
TTAGCAAATAGTGTAGGACA+GGG 0.706605 1_2:+17667486 None:intergenic
TTAGGCAGCGAATCAAGCTG+CGG 0.712248 1_2:+17662681 None:intergenic
ATTATGCAATCCGTTGACTG+GGG 0.726680 1_2:-17667862 Msa0060080:CDS
TAACAGAAGAAGGACTAACG+TGG 0.741335 1_2:-17667380 Msa0060080:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTGTTTATTTTTGTTTA+AGG + chr1_2:17662402-17662421 None:intergenic 10.0%
!!! ATGTGTATTTTAAATTTTTA+TGG - chr1_2:17663101-17663120 Msa0060080:CDS 10.0%
!! ATTATTATTATTATTCACAA+CGG + chr1_2:17666289-17666308 None:intergenic 10.0%
!!! TTCAAATCATAATTTATTTT+AGG - chr1_2:17667247-17667266 Msa0060080:CDS 10.0%
!!! TCAAATCATAATTTATTTTA+GGG - chr1_2:17667248-17667267 Msa0060080:CDS 10.0%
!! ATAATATAGCTTAAAATAAT+GGG + chr1_2:17667809-17667828 None:intergenic 10.0%
!! TATAATATAGCTTAAAATAA+TGG + chr1_2:17667810-17667829 None:intergenic 10.0%
!!! ATTTTATCATACAATAATAT+CGG - chr1_2:17668061-17668080 Msa0060080:intron 10.0%
!!! TATTTGAAATTAACATTTTA+AGG - chr1_2:17669811-17669830 Msa0060080:intron 10.0%
!!! TTTGGGATAATAATAAATTT+TGG + chr1_2:17662343-17662362 None:intergenic 15.0%
!! AATGAAAATGAAAAAAGTTT+GGG + chr1_2:17662360-17662379 None:intergenic 15.0%
!! TAATGAAAATGAAAAAAGTT+TGG + chr1_2:17662361-17662380 None:intergenic 15.0%
!!! TTAAAAATTTAGAATAGACA+TGG - chr1_2:17666654-17666673 Msa0060080:CDS 15.0%
!!! AATTTTGCAATAATTTTTTG+CGG + chr1_2:17667479-17667498 None:intergenic 15.0%
!! AGATAAAAAGTAATAAAATC+TGG + chr1_2:17667514-17667533 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG - chr1_2:17667645-17667664 Msa0060080:CDS 15.0%
!! GAAATATTAAATTTAGTTAG+AGG + chr1_2:17667840-17667859 None:intergenic 15.0%
!! CTAAATTTAATATTTCAAAC+AGG - chr1_2:17667844-17667863 Msa0060080:CDS 15.0%
!!! AAATATTAGATTTATTTTCC+TGG - chr1_2:17668627-17668646 Msa0060080:intron 15.0%
!!! GGAAAATTAAAATTTTGTTT+GGG + chr1_2:17668985-17669004 None:intergenic 15.0%
!!! TGGAAAATTAAAATTTTGTT+TGG + chr1_2:17668986-17669005 None:intergenic 15.0%
!!! ATAATAATAAATTTTGGTGG+TGG + chr1_2:17662337-17662356 None:intergenic 20.0%
!! CGATAATAACATAACATATT+AGG + chr1_2:17662764-17662783 None:intergenic 20.0%
!! GTCACTTGAAATAATTAAAT+AGG - chr1_2:17662842-17662861 Msa0060080:intron 20.0%
!! TATTAAATTCCTTAACAAGA+AGG + chr1_2:17662937-17662956 None:intergenic 20.0%
!!! TATGAAATGAAATTTTTAGC+TGG - chr1_2:17662975-17662994 Msa0060080:intron 20.0%
!!! TCTTTTCTAATAGTTTTTCT+AGG + chr1_2:17663409-17663428 None:intergenic 20.0%
!!! TTCTTTTAGTTCCATTTTTT+TGG - chr1_2:17664131-17664150 Msa0060080:intron 20.0%
!!! AGGAATTCAAATTCTAAAAA+TGG + chr1_2:17664697-17664716 None:intergenic 20.0%
!! TTAGAAGAAGAAAAATATAC+AGG + chr1_2:17665250-17665269 None:intergenic 20.0%
!!! ATTTGATAATTGACATAATC+GGG + chr1_2:17666003-17666022 None:intergenic 20.0%
!!! GATTTGATAATTGACATAAT+CGG + chr1_2:17666004-17666023 None:intergenic 20.0%
!! ATGTCAATTATCAAATCAAA+AGG - chr1_2:17666007-17666026 Msa0060080:intron 20.0%
!! TGTCAATTATCAAATCAAAA+GGG - chr1_2:17666008-17666027 Msa0060080:intron 20.0%
!!! ATAATTTTCTTTGACTCTAA+TGG - chr1_2:17666630-17666649 Msa0060080:CDS 20.0%
!! AAACAAATTTGAATTGAGTA+GGG + chr1_2:17667384-17667403 None:intergenic 20.0%
!! TAAACAAATTTGAATTGAGT+AGG + chr1_2:17667385-17667404 None:intergenic 20.0%
!! AAATGCTGTTAAAATTAAGT+AGG - chr1_2:17667734-17667753 Msa0060080:CDS 20.0%
!! AATGCTGTTAAAATTAAGTA+GGG - chr1_2:17667735-17667754 Msa0060080:CDS 20.0%
!! TGACACCAAAAAAAATATAA+AGG + chr1_2:17667871-17667890 None:intergenic 20.0%
!!! ATTGACGTTTTTAAACATAA+AGG + chr1_2:17667901-17667920 None:intergenic 20.0%
!! ATTGTTACCAAATTATTTCA+AGG + chr1_2:17668661-17668680 None:intergenic 20.0%
!!! ATTGACTTTGAATTTGTTTT+GGG + chr1_2:17669046-17669065 None:intergenic 20.0%
!!! TATTGACTTTGAATTTGTTT+TGG + chr1_2:17669047-17669066 None:intergenic 20.0%
!! TTAGCATAACAAAATTATAC+TGG - chr1_2:17669295-17669314 Msa0060080:intron 20.0%
!!! AATTTTAGTGTAAGAAACAT+CGG + chr1_2:17669429-17669448 None:intergenic 20.0%
!! GTAAATTAAATCATTCTCTT+CGG - chr1_2:17669661-17669680 Msa0060080:intron 20.0%
!! ATAATATGTTGAAAAACCAT+TGG + chr1_2:17670196-17670215 None:intergenic 20.0%
!! TTTAAGAAAGCAATAAATTG+TGG - chr1_2:17670247-17670266 Msa0060080:intron 20.0%
!! GGGATAATAATAAATTTTGG+TGG + chr1_2:17662340-17662359 None:intergenic 25.0%
! AAGAAATTAAAGAAGATCGT+TGG - chr1_2:17662455-17662474 Msa0060080:three_prime_UTR 25.0%
! TAATTAAATAGGACACTTTG+CGG - chr1_2:17662853-17662872 Msa0060080:intron 25.0%
! ATTATACTTCCTTCTTGTTA+AGG - chr1_2:17662925-17662944 Msa0060080:intron 25.0%
! TACTTTAAGCAAGCTTAAAT+TGG + chr1_2:17663684-17663703 None:intergenic 25.0%
! CATTTATTCATCGAATAACT+CGG - chr1_2:17663720-17663739 Msa0060080:intron 25.0%
! ATTTATTCATCGAATAACTC+GGG - chr1_2:17663721-17663740 Msa0060080:intron 25.0%
! GAAATTGTTTGAAGATTGAT+TGG + chr1_2:17663766-17663785 None:intergenic 25.0%
! ATTTAACATGGTATTAGAGT+CGG + chr1_2:17663850-17663869 None:intergenic 25.0%
! ACTCTAATACCATGTTAAAT+GGG - chr1_2:17663850-17663869 Msa0060080:intron 25.0%
!! CATCCTTTGAATTATCTTTT+GGG + chr1_2:17663888-17663907 None:intergenic 25.0%
!! TCATCCTTTGAATTATCTTT+TGG + chr1_2:17663889-17663908 None:intergenic 25.0%
! AAAAGATAATTCAAAGGATG+AGG - chr1_2:17663888-17663907 Msa0060080:intron 25.0%
! AAAGATAATTCAAAGGATGA+GGG - chr1_2:17663889-17663908 Msa0060080:intron 25.0%
!! TTTGGTGTATAAATGTGTTT+GGG + chr1_2:17663917-17663936 None:intergenic 25.0%
!!! TTTTGGTGTATAAATGTGTT+TGG + chr1_2:17663918-17663937 None:intergenic 25.0%
! ATTTATACACCAAAAAACCT+GGG - chr1_2:17663923-17663942 Msa0060080:intron 25.0%
!! ATTTTGTCAAAATTGCAATG+TGG - chr1_2:17663996-17664015 Msa0060080:intron 25.0%
! AAGTTCACATTCCAAAAAAA+TGG + chr1_2:17664145-17664164 None:intergenic 25.0%
! CATGCTATTATAGATTCATT+TGG - chr1_2:17664179-17664198 Msa0060080:CDS 25.0%
! ATGCAAAACAGCTAATTAAA+TGG + chr1_2:17664206-17664225 None:intergenic 25.0%
! AATGCGGAAATTCATTTAAA+GGG + chr1_2:17664577-17664596 None:intergenic 25.0%
! AAATGCGGAAATTCATTTAA+AGG + chr1_2:17664578-17664597 None:intergenic 25.0%
!!! ACTATTTTATCTTCAAGTTG+AGG + chr1_2:17664905-17664924 None:intergenic 25.0%
! GATAAAATAGTTTCTGTTCT+TGG - chr1_2:17664914-17664933 Msa0060080:intron 25.0%
! AGGCATTAAATAATTCTGAA+GGG + chr1_2:17665107-17665126 None:intergenic 25.0%
!! AGAAGTAATATCCTTTTTGA+GGG + chr1_2:17665737-17665756 None:intergenic 25.0%
!! ATTTTCTTGTACTAGAGAAA+AGG - chr1_2:17666476-17666495 Msa0060080:CDS 25.0%
! AGTTTCTGTAGTTAATGTAT+AGG - chr1_2:17666683-17666702 Msa0060080:CDS 25.0%
! TATAGAAACTGGATTAAGAA+TGG + chr1_2:17666855-17666874 None:intergenic 25.0%
! AGTGCAGAAAAACAAAATTA+GGG + chr1_2:17667351-17667370 None:intergenic 25.0%
! CAAGATTATAACACTATGAA+AGG + chr1_2:17667611-17667630 None:intergenic 25.0%
!!! CAGGTCCTTTATATTTTTTT+TGG - chr1_2:17667863-17667882 Msa0060080:CDS 25.0%
! AAATAAAGACAACTACATCA+GGG + chr1_2:17668045-17668064 None:intergenic 25.0%
! AAAATAAAGACAACTACATC+AGG + chr1_2:17668046-17668065 None:intergenic 25.0%
! CTTTACGAAAAATTTCACAT+CGG + chr1_2:17668226-17668245 None:intergenic 25.0%
! TGATAAATTTCAGTCATTGT+TGG - chr1_2:17668683-17668702 Msa0060080:intron 25.0%
! AAAATAAGTGAAAGAACACA+TGG + chr1_2:17668938-17668957 None:intergenic 25.0%
! ACAAATCATATTGGATTTCA+TGG - chr1_2:17669687-17669706 Msa0060080:intron 25.0%
!! TGAATTATGATTTTGGATCT+AGG - chr1_2:17669784-17669803 Msa0060080:intron 25.0%
!!! AACATTTTAAGGTTTTGCTA+AGG - chr1_2:17669822-17669841 Msa0060080:intron 25.0%
! TGCTAAGGATATAAGTTATA+TGG - chr1_2:17669837-17669856 Msa0060080:intron 25.0%
! GATATAAGTTATATGGTGTT+TGG - chr1_2:17669844-17669863 Msa0060080:intron 25.0%
! ATACTAGCATTATATTGCAT+TGG - chr1_2:17670146-17670165 Msa0060080:CDS 25.0%
!!! GGTTTTTCAACATATTATGA+TGG - chr1_2:17670198-17670217 Msa0060080:CDS 25.0%
!!! TATATCATTTTGAAGCAACT+TGG - chr1_2:17670347-17670366 Msa0060080:five_prime_UTR 25.0%
!!! ATATCATTTTGAAGCAACTT+GGG - chr1_2:17670348-17670367 Msa0060080:five_prime_UTR 25.0%
!!! ATAATAAATTTTGGTGGTGG+AGG + chr1_2:17662334-17662353 None:intergenic 30.0%
AATTAAAGAAGATCGTTGGT+AGG - chr1_2:17662459-17662478 Msa0060080:three_prime_UTR 30.0%
AGAAGAAGTTGAATGAACTA+CGG + chr1_2:17662530-17662549 None:intergenic 30.0%
! AATCTATTGTTGGTGAAGAA+TGG + chr1_2:17662580-17662599 None:intergenic 30.0%
!! AAGTCATTTTCATTCACCTT+CGG - chr1_2:17662691-17662710 Msa0060080:CDS 30.0%
! ATAAGTATAAGAGAGTGTAC+CGG + chr1_2:17662727-17662746 None:intergenic 30.0%
AAGATCACTTGTGTTATGTT+AGG - chr1_2:17663032-17663051 Msa0060080:intron 30.0%
AGACTAGACAAGATAAGATT+AGG - chr1_2:17663222-17663241 Msa0060080:intron 30.0%
ACACAATTAGAGAGAAAGTT+CGG - chr1_2:17663249-17663268 Msa0060080:intron 30.0%
TAGAAAAGATGATAGAAACC+AGG - chr1_2:17663285-17663304 Msa0060080:intron 30.0%
ATGATTCAGATAGACCATTA+TGG - chr1_2:17663440-17663459 Msa0060080:intron 30.0%
AGCTTAAATTGGTATTAGAG+TGG + chr1_2:17663673-17663692 None:intergenic 30.0%
TTTAACATGGTATTAGAGTC+GGG + chr1_2:17663849-17663868 None:intergenic 30.0%
GACTCTAATACCATGTTAAA+TGG - chr1_2:17663849-17663868 Msa0060080:intron 30.0%
CATCCCAAAAGATAATTCAA+AGG - chr1_2:17663882-17663901 Msa0060080:intron 30.0%
CATTTATACACCAAAAAACC+TGG - chr1_2:17663922-17663941 Msa0060080:intron 30.0%
ATAATAGCATGCATCAAGAT+TGG + chr1_2:17664170-17664189 None:intergenic 30.0%
! AGTTTAGAATTATCCAGCAA+TGG + chr1_2:17664242-17664261 None:intergenic 30.0%
TTGCTGGATAATTCTAAACT+TGG - chr1_2:17664242-17664261 Msa0060080:intron 30.0%
TTGTATGTGTTCTTCAACTT+AGG - chr1_2:17664305-17664324 Msa0060080:intron 30.0%
! GCTCTTTTCATAAGCTATTT+TGG - chr1_2:17664440-17664459 Msa0060080:CDS 30.0%
!! TTTCATAAGCTATTTTGGAG+AGG - chr1_2:17664445-17664464 Msa0060080:CDS 30.0%
AACTCTTGAACTTAATGTCA+TGG - chr1_2:17664635-17664654 Msa0060080:intron 30.0%
!! ATTTTGATAGATCATGGGAT+TGG + chr1_2:17664721-17664740 None:intergenic 30.0%
!! CGACAATTTTGATAGATCAT+GGG + chr1_2:17664726-17664745 None:intergenic 30.0%
!! ACGACAATTTTGATAGATCA+TGG + chr1_2:17664727-17664746 None:intergenic 30.0%
ATGATCTATCAAAATTGTCG+TGG - chr1_2:17664726-17664745 Msa0060080:intron 30.0%
CAGGCATTAAATAATTCTGA+AGG + chr1_2:17665108-17665127 None:intergenic 30.0%
! ATTTAATGCCTGATGATGAT+CGG - chr1_2:17665116-17665135 Msa0060080:intron 30.0%
! TTCTTCTTCTAAAGAAGACA+CGG - chr1_2:17665258-17665277 Msa0060080:intron 30.0%
! AAGAATTAGAAACGGCTTTT+TGG - chr1_2:17665287-17665306 Msa0060080:intron 30.0%
AAGAGACAATTTCTATCAAG+CGG - chr1_2:17665396-17665415 Msa0060080:intron 30.0%
AATGTGATAACATGTTAGAG+GGG + chr1_2:17665660-17665679 None:intergenic 30.0%
GAATGTGATAACATGTTAGA+GGG + chr1_2:17665661-17665680 None:intergenic 30.0%
AGAATGTGATAACATGTTAG+AGG + chr1_2:17665662-17665681 None:intergenic 30.0%
! CAGAAGTAATATCCTTTTTG+AGG + chr1_2:17665738-17665757 None:intergenic 30.0%
AAGTATGATGAGAAAACACA+AGG - chr1_2:17665823-17665842 Msa0060080:intron 30.0%
ATCAGGAGAAATTCCATTTA+AGG + chr1_2:17665857-17665876 None:intergenic 30.0%
AAATGGAATTTCTCCTGATA+AGG - chr1_2:17665858-17665877 Msa0060080:intron 30.0%
TTAATCTTGCTGGAAAAACT+TGG + chr1_2:17665895-17665914 None:intergenic 30.0%
!! TTTTAAAGGGTTAATCTTGC+TGG + chr1_2:17665905-17665924 None:intergenic 30.0%
!!! GCTTTTTTGGAAAAGATATC+CGG + chr1_2:17665943-17665962 None:intergenic 30.0%
GAAATTCTTACCGCAATTTA+AGG - chr1_2:17666032-17666051 Msa0060080:intron 30.0%
ACAATCAAAAGTCTGTGAAT+GGG - chr1_2:17666181-17666200 Msa0060080:CDS 30.0%
ATGTAACAACAAAATCTCCA+AGG - chr1_2:17666307-17666326 Msa0060080:CDS 30.0%
TTTAACAACAGCACATTCTT+TGG + chr1_2:17666570-17666589 None:intergenic 30.0%
TGCTGTTGTTAAAAAAGCTT+GGG - chr1_2:17666577-17666596 Msa0060080:CDS 30.0%
ACTATTGGAAGAAGCAAAAA+TGG - chr1_2:17666605-17666624 Msa0060080:CDS 30.0%
TGCAGATTAGATATAGAAAC+TGG + chr1_2:17666866-17666885 None:intergenic 30.0%
AGTTTCTATATCTAATCTGC+AGG - chr1_2:17666865-17666884 Msa0060080:CDS 30.0%
CAATAACATTCATTCTCTCT+TGG + chr1_2:17666910-17666929 None:intergenic 30.0%
AGAGAGAATGAATGTTATTG+TGG - chr1_2:17666910-17666929 Msa0060080:CDS 30.0%
AAGGTTAAATGACACAATAG+GGG + chr1_2:17667189-17667208 None:intergenic 30.0%
CAAGGTTAAATGACACAATA+GGG + chr1_2:17667190-17667209 None:intergenic 30.0%
!! TACAAGGTCGCTATTTTATA+GGG + chr1_2:17667766-17667785 None:intergenic 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG + chr1_2:17667765-17667784 None:intergenic 30.0%
CAGTGCAGAAAAACAAAATT+AGG + chr1_2:17667352-17667371 None:intergenic 30.0%
!!! TAATCAAACGTTGTTTTAGC+AGG - chr1_2:17667673-17667692 Msa0060080:CDS 30.0%
!!! AATCAAACGTTGTTTTAGCA+GGG - chr1_2:17667674-17667693 Msa0060080:CDS 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - chr1_2:17667765-17667784 Msa0060080:CDS 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - chr1_2:17667766-17667785 Msa0060080:CDS 30.0%
!!! TGGAAGCAACTTTCATTTTT+TGG + chr1_2:17667933-17667952 None:intergenic 30.0%
AAAAATGAAAGTTGCTTCCA+CGG - chr1_2:17667933-17667952 Msa0060080:CDS 30.0%
AATAAAGACAACTACATCAG+GGG + chr1_2:17668044-17668063 None:intergenic 30.0%
! CGATGTGAAATTTTTCGTAA+AGG - chr1_2:17668224-17668243 Msa0060080:intron 30.0%
AGTATTTGATATCCTCAATG+AGG - chr1_2:17668265-17668284 Msa0060080:intron 30.0%
! CATTCAATCTTTGAAAGGTA+TGG + chr1_2:17668314-17668333 None:intergenic 30.0%
CATAGCATTCAATCTTTGAA+AGG + chr1_2:17668319-17668338 None:intergenic 30.0%
ATGAACATCTGTCATATAGA+AGG + chr1_2:17668490-17668509 None:intergenic 30.0%
ATCCATGCCTTGAAATAATT+TGG - chr1_2:17668651-17668670 Msa0060080:intron 30.0%
TACCAAATTATTTCAAGGCA+TGG + chr1_2:17668656-17668675 None:intergenic 30.0%
AGCATCATAAACACTTCTTT+AGG - chr1_2:17668826-17668845 Msa0060080:intron 30.0%
!!! AAACCCTTGTTTTTGATACA+AGG + chr1_2:17668868-17668887 None:intergenic 30.0%
!! AAATTTTGTTTGGGATGACA+TGG + chr1_2:17668976-17668995 None:intergenic 30.0%
! CACATGTTCTAGATGTTTAT+GGG + chr1_2:17669093-17669112 None:intergenic 30.0%
! TCACATGTTCTAGATGTTTA+TGG + chr1_2:17669094-17669113 None:intergenic 30.0%
! AACATCTAGAACATGTGATA+TGG - chr1_2:17669096-17669115 Msa0060080:intron 30.0%
! ACATCTAGAACATGTGATAT+GGG - chr1_2:17669097-17669116 Msa0060080:intron 30.0%
GTCTTTAATAACATGCTAGA+CGG + chr1_2:17669193-17669212 None:intergenic 30.0%
AAACAAACTAGAGTAGACTA+GGG - chr1_2:17669213-17669232 Msa0060080:intron 30.0%
GTTATGCTAAGTTTCTAACT+AGG + chr1_2:17669285-17669304 None:intergenic 30.0%
TCATGCGTTCATTAATATCA+AGG + chr1_2:17669464-17669483 None:intergenic 30.0%
GTCATTAGATAATAGCATCA+AGG + chr1_2:17669524-17669543 None:intergenic 30.0%
TAATGACAAAAGAAAACTGC+AGG - chr1_2:17669537-17669556 Msa0060080:intron 30.0%
TTCTGCTCGATTAGAATTAA+AGG - chr1_2:17669639-17669658 Msa0060080:intron 30.0%
CTTCGGTAAACAAATCATAT+TGG - chr1_2:17669678-17669697 Msa0060080:intron 30.0%
CAAACTTAGCATAGCTTAAA+GGG + chr1_2:17669749-17669768 None:intergenic 30.0%
ACAAACTTAGCATAGCTTAA+AGG + chr1_2:17669750-17669769 None:intergenic 30.0%
CCAAAATCATAATTCAGCAA+TGG + chr1_2:17669780-17669799 None:intergenic 30.0%
! CCATTGCTGAATTATGATTT+TGG - chr1_2:17669777-17669796 Msa0060080:intron 30.0%
!! AAACTTGTTAACAGTTGGAA+GGG + chr1_2:17669982-17670001 None:intergenic 30.0%
! TCTTGTTCTTCATTTTCAGA+AGG + chr1_2:17670084-17670103 None:intergenic 30.0%
GAAGAGTTTGAGAACAAACA+TGG + chr1_2:17662556-17662575 None:intergenic 35.0%
TTCACCAACAATAGATTCCT+AGG - chr1_2:17662583-17662602 Msa0060080:three_prime_UTR 35.0%
AACAATAGATTCCTAGGCTT+GGG - chr1_2:17662589-17662608 Msa0060080:three_prime_UTR 35.0%
AGTATCAAAGGAAAGGAAGA+AGG - chr1_2:17662623-17662642 Msa0060080:three_prime_UTR 35.0%
GAAGGTGAATGAAAATGACT+TGG + chr1_2:17662692-17662711 None:intergenic 35.0%
!! AGTCATTTTCATTCACCTTC+GGG - chr1_2:17662692-17662711 Msa0060080:CDS 35.0%
GTTATGTTAGGACAGAACTT+AGG - chr1_2:17663044-17663063 Msa0060080:intron 35.0%
CACAATTAGAGAGAAAGTTC+GGG - chr1_2:17663250-17663269 Msa0060080:intron 35.0%
ATGATCGAATTACGCCATAA+TGG + chr1_2:17663457-17663476 None:intergenic 35.0%
AAGGATTGTAATGTGGGAAT+TGG + chr1_2:17663824-17663843 None:intergenic 35.0%
AGATTCTAGCCCATTTAACA+TGG + chr1_2:17663862-17663881 None:intergenic 35.0%
!! GTTTCTCAAGACTTGTTGTT+GGG - chr1_2:17664018-17664037 Msa0060080:intron 35.0%
TATGATTTAGTTGCCATTGC+TGG - chr1_2:17664226-17664245 Msa0060080:intron 35.0%
ATAAGTTGTTTGCGCAAGTA+GGG + chr1_2:17664331-17664350 None:intergenic 35.0%
AATAAGTTGTTTGCGCAAGT+AGG + chr1_2:17664332-17664351 None:intergenic 35.0%
AAGCTCAAATAACTCAATCC+AGG - chr1_2:17664551-17664570 Msa0060080:CDS 35.0%
ATCTATCAAAATTGTCGTGG+AGG - chr1_2:17664729-17664748 Msa0060080:intron 35.0%
TCTATCAAAATTGTCGTGGA+GGG - chr1_2:17664730-17664749 Msa0060080:intron 35.0%
AGGCATATTGTAGGATCTTT+AGG - chr1_2:17664783-17664802 Msa0060080:intron 35.0%
TAATGCAGAATGAAGCCTTT+CGG + chr1_2:17664813-17664832 None:intergenic 35.0%
AAGGCTTCATTCTGCATTAA+TGG - chr1_2:17664814-17664833 Msa0060080:intron 35.0%
AAGAAAGGGGTTCATAATTG+AGG + chr1_2:17664993-17665012 None:intergenic 35.0%
! TTTCATCTCGCTTCTGAAAA+CGG + chr1_2:17665059-17665078 None:intergenic 35.0%
! TTTTCAGAAGCGAGATGAAA+AGG - chr1_2:17665059-17665078 Msa0060080:intron 35.0%
ATGATCGGAGCTTAAATGTA+TGG - chr1_2:17665131-17665150 Msa0060080:intron 35.0%
AAGAATGTCTGCTATGATTC+TGG - chr1_2:17665172-17665191 Msa0060080:intron 35.0%
TTAGCAAATAGTGTAGGACA+GGG + chr1_2:17665220-17665239 None:intergenic 35.0%
ATTAGCAAATAGTGTAGGAC+AGG + chr1_2:17665221-17665240 None:intergenic 35.0%
! GTCCTACACTATTTGCTAAT+TGG - chr1_2:17665221-17665240 Msa0060080:intron 35.0%
CACCAATTAGCAAATAGTGT+AGG + chr1_2:17665226-17665245 None:intergenic 35.0%
GGAGTCTGAAGAATTAGAAA+CGG - chr1_2:17665279-17665298 Msa0060080:intron 35.0%
CTAACGTGGTTACTAGATAA+AGG - chr1_2:17665337-17665356 Msa0060080:intron 35.0%
GAAATTGTCTCTTACAGTCT+CGG + chr1_2:17665389-17665408 None:intergenic 35.0%
AGATGAAATAGCATCGTTCA+CGG + chr1_2:17665422-17665441 None:intergenic 35.0%
ATGTTACAGATAGCAGCAAA+AGG - chr1_2:17665521-17665540 Msa0060080:intron 35.0%
! TCCTTGCTATGAAGATAGAT+AGG + chr1_2:17665547-17665566 None:intergenic 35.0%
ATCTATCTTCATAGCAAGGA+AGG - chr1_2:17665547-17665566 Msa0060080:CDS 35.0%
ATGTGATAACATGTTAGAGG+GGG + chr1_2:17665659-17665678 None:intergenic 35.0%
!! AGTAATATCCTTTTTGAGGG+AGG + chr1_2:17665734-17665753 None:intergenic 35.0%
! GATTAACCCTTTAAAAGCTC+AGG - chr1_2:17665909-17665928 Msa0060080:intron 35.0%
!! TTTTTGGAAAAGATATCCGG+AGG + chr1_2:17665940-17665959 None:intergenic 35.0%
!!! AAATGTGGACATCGCTTTTT+TGG + chr1_2:17665956-17665975 None:intergenic 35.0%
! AAAAGCGATGTCCACATTTT+TGG - chr1_2:17665957-17665976 Msa0060080:intron 35.0%
! AAAGCGATGTCCACATTTTT+GGG - chr1_2:17665958-17665977 Msa0060080:intron 35.0%
TGATAATTGACATAATCGGG+AGG + chr1_2:17666000-17666019 None:intergenic 35.0%
ATAGCCATGTCCTTAAATTG+CGG + chr1_2:17666045-17666064 None:intergenic 35.0%
CAATTTAAGGACATGGCTAT+TGG - chr1_2:17666045-17666064 Msa0060080:intron 35.0%
TGTTTCCAATGGTACTATTG+TGG - chr1_2:17666089-17666108 Msa0060080:intron 35.0%
GTTTCCAATGGTACTATTGT+GGG - chr1_2:17666090-17666109 Msa0060080:intron 35.0%
GCTGATCCATTTAAACTATC+AGG + chr1_2:17666117-17666136 None:intergenic 35.0%
ATTGTCATCGACCGTAATTT+CGG + chr1_2:17666166-17666185 None:intergenic 35.0%
GACAATCAAAAGTCTGTGAA+TGG - chr1_2:17666180-17666199 Msa0060080:CDS 35.0%
TCTAGTAGGACAACAGTAAA+CGG - chr1_2:17666216-17666235 Msa0060080:CDS 35.0%
TCAAGGGGAATTACATTACA+TGG - chr1_2:17666245-17666264 Msa0060080:CDS 35.0%
AAATCTCCAAGGCTTGAAAA+TGG - chr1_2:17666318-17666337 Msa0060080:CDS 35.0%
AAAGAAAGCTGAGATGTTCT+TGG - chr1_2:17666440-17666459 Msa0060080:CDS 35.0%
TTGTACTAGAGAAAAGGTCA+CGG - chr1_2:17666482-17666501 Msa0060080:CDS 35.0%
! GTGCTGTTGTTAAAAAAGCT+TGG - chr1_2:17666576-17666595 Msa0060080:CDS 35.0%
GCTGTTGTTAAAAAAGCTTG+GGG - chr1_2:17666578-17666597 Msa0060080:CDS 35.0%
AAATCCAAAACCTGGAATTC+TGG + chr1_2:17666960-17666979 None:intergenic 35.0%
CCTTGTATCATGACTGTAAA+AGG + chr1_2:17666990-17667009 None:intergenic 35.0%
! CCTTTTACAGTCATGATACA+AGG - chr1_2:17666987-17667006 Msa0060080:CDS 35.0%
CCACAAAATCTACTTTCTCA+TGG + chr1_2:17667106-17667125 None:intergenic 35.0%
! CCATGAGAAAGTAGATTTTG+TGG - chr1_2:17667103-17667122 Msa0060080:CDS 35.0%
AGGTTAAATGACACAATAGG+GGG + chr1_2:17667188-17667207 None:intergenic 35.0%
CCAAGGTTAAATGACACAAT+AGG + chr1_2:17667191-17667210 None:intergenic 35.0%
!! CCTATTGTGTCATTTAACCT+TGG - chr1_2:17667188-17667207 Msa0060080:CDS 35.0%
ATGAGAAGTCAGAAAACCAA+GGG + chr1_2:17667216-17667235 None:intergenic 35.0%
TATGAGAAGTCAGAAAACCA+AGG + chr1_2:17667217-17667236 None:intergenic 35.0%
AAGTAGGGACTAAACTTACA+AGG - chr1_2:17667750-17667769 Msa0060080:CDS 35.0%
GACTTAAGACAAGTCATTCA+CGG - chr1_2:17668155-17668174 Msa0060080:intron 35.0%
ATGGTGTCTACATTACTCTT+AGG - chr1_2:17668192-17668211 Msa0060080:intron 35.0%
GTAAAGGTAAAGCAATTCCA+GGG - chr1_2:17668240-17668259 Msa0060080:intron 35.0%
AGGATATCAAATACTTTCCC+TGG + chr1_2:17668260-17668279 None:intergenic 35.0%
ATTTGATATCCTCAATGAGG+TGG - chr1_2:17668268-17668287 Msa0060080:intron 35.0%
TGACACTCACTTTGGTTATA+AGG + chr1_2:17668352-17668371 None:intergenic 35.0%
ACATAAAGTGACACTCACTT+TGG + chr1_2:17668360-17668379 None:intergenic 35.0%
TGCACCTTGTATCAAAAACA+AGG - chr1_2:17668861-17668880 Msa0060080:intron 35.0%
GCACCTTGTATCAAAAACAA+GGG - chr1_2:17668862-17668881 Msa0060080:intron 35.0%
TAGATGTTTATGGGCATATG+TGG + chr1_2:17669084-17669103 None:intergenic 35.0%
CAAACAAACTAGAGTAGACT+AGG - chr1_2:17669212-17669231 Msa0060080:intron 35.0%
!! GCATTGATTCAAATGCATGT+AGG + chr1_2:17669252-17669271 None:intergenic 35.0%
GCGTTCATTAATATCAAGGA+AGG + chr1_2:17669460-17669479 None:intergenic 35.0%
ATAGGGGTAAACAATATGCA+CGG + chr1_2:17669577-17669596 None:intergenic 35.0%
AATTCTAATCGAGCAGAATC+TGG + chr1_2:17669637-17669656 None:intergenic 35.0%
GCTTAAAGGGAAACATATTC+TGG + chr1_2:17669736-17669755 None:intergenic 35.0%
AAGCTATGCTAAGTTTGTCT+TGG - chr1_2:17669752-17669771 Msa0060080:intron 35.0%
!! AACTTGTTAACAGTTGGAAG+GGG + chr1_2:17669981-17670000 None:intergenic 35.0%
!! CAAACTTGTTAACAGTTGGA+AGG + chr1_2:17669983-17670002 None:intergenic 35.0%
!! TGGTCAAACTTGTTAACAGT+TGG + chr1_2:17669987-17670006 None:intergenic 35.0%
GTTAACAAGTTTGACCAAAC+AGG - chr1_2:17669990-17670009 Msa0060080:intron 35.0%
TTGGCTTCCATTGTAAAGAT+AGG - chr1_2:17670165-17670184 Msa0060080:CDS 35.0%
TGGCTTCCATTGTAAAGATA+GGG - chr1_2:17670166-17670185 Msa0060080:CDS 35.0%
GGTAGTTGAACTAACACCAA+TGG - chr1_2:17662480-17662499 Msa0060080:three_prime_UTR 40.0%
ATGTCGATACATGCTACCAT+TGG + chr1_2:17662499-17662518 None:intergenic 40.0%
! AATGGTAGCATGTATCGACA+TGG - chr1_2:17662498-17662517 Msa0060080:three_prime_UTR 40.0%
CAAGCCTAGGAATCTATTGT+TGG + chr1_2:17662590-17662609 None:intergenic 40.0%
CAACAATAGATTCCTAGGCT+TGG - chr1_2:17662588-17662607 Msa0060080:three_prime_UTR 40.0%
!! GGCTTTGAGTATCAAAGGAA+AGG - chr1_2:17662616-17662635 Msa0060080:three_prime_UTR 40.0%
GGAAAGGAAGAAGGATACTA+AGG - chr1_2:17662632-17662651 Msa0060080:exon 40.0%
CGAGAATCAAGTAAGCGTAA+CGG - chr1_2:17663169-17663188 Msa0060080:intron 40.0%
AGATGATAGAAACCAGGCTT+AGG - chr1_2:17663291-17663310 Msa0060080:intron 40.0%
ATTATCCCACTAAGTGGTGT+TGG + chr1_2:17663485-17663504 None:intergenic 40.0%
AACACCACTTAGTGGGATAA+TGG - chr1_2:17663484-17663503 Msa0060080:intron 40.0%
ACACCACTTAGTGGGATAAT+GGG - chr1_2:17663485-17663504 Msa0060080:intron 40.0%
!! AGTGGGATAATGGGTTGTTA+TGG - chr1_2:17663494-17663513 Msa0060080:intron 40.0%
ATTATCCCACTAAGTGGTGT+TGG + chr1_2:17663485-17663504 None:intergenic 40.0%
AACACCACTTAGTGGGATAA+TGG - chr1_2:17663484-17663503 Msa0060080:intron 40.0%
ACACCACTTAGTGGGATAAT+GGG - chr1_2:17663485-17663504 Msa0060080:intron 40.0%
CGGGTTAAGGATTGTAATGT+GGG + chr1_2:17663830-17663849 None:intergenic 40.0%
TCGGGTTAAGGATTGTAATG+TGG + chr1_2:17663831-17663850 None:intergenic 40.0%
ATGGTATTAGAGTCGGGTTA+AGG + chr1_2:17663843-17663862 None:intergenic 40.0%
!! GGTTTCTCAAGACTTGTTGT+TGG - chr1_2:17664017-17664036 Msa0060080:intron 40.0%
GGGTAACTCTCATTGTAGTA+TGG - chr1_2:17664038-17664057 Msa0060080:intron 40.0%
! GTTTTCTTCTCTGCGCATTT+TGG - chr1_2:17664096-17664115 Msa0060080:intron 40.0%
AAGCGCTTGTGACACTAATT+GGG + chr1_2:17664519-17664538 None:intergenic 40.0%
TAAGCGCTTGTGACACTAAT+TGG + chr1_2:17664520-17664539 None:intergenic 40.0%
GGAAATTCATTTAAAGGGCC+TGG + chr1_2:17664572-17664591 None:intergenic 40.0%
TGATAGATCATGGGATTGGA+AGG + chr1_2:17664717-17664736 None:intergenic 40.0%
CTATCAAAATTGTCGTGGAG+GGG - chr1_2:17664731-17664750 Msa0060080:intron 40.0%
! CATTATGCAATCCGTTGACT+GGG - chr1_2:17664840-17664859 Msa0060080:intron 40.0%
! ATTATGCAATCCGTTGACTG+GGG - chr1_2:17664841-17664860 Msa0060080:intron 40.0%
AGTTTCTGTTCTTGGATGCA+TGG - chr1_2:17664922-17664941 Msa0060080:intron 40.0%
TAATCTCTGCGTCAAGAAAG+GGG + chr1_2:17665006-17665025 None:intergenic 40.0%
CTAATCTCTGCGTCAAGAAA+GGG + chr1_2:17665007-17665026 None:intergenic 40.0%
AAGGGCAACATGTAAACTCT+CGG + chr1_2:17665089-17665108 None:intergenic 40.0%
TTTAAGCTCCGATCATCATC+AGG + chr1_2:17665127-17665146 None:intergenic 40.0%
ATCGGAGCTTAAATGTATGG+AGG - chr1_2:17665134-17665153 Msa0060080:intron 40.0%
!!! TATGATTCTGGTTTTCCTCG+TGG - chr1_2:17665184-17665203 Msa0060080:intron 40.0%
! TTAGAAACGGCTTTTTGGAC+TGG - chr1_2:17665292-17665311 Msa0060080:intron 40.0%
TAACAGAAGAAGGACTAACG+TGG - chr1_2:17665323-17665342 Msa0060080:intron 40.0%
!! GTGAACGATGCTATTTCATC+TGG - chr1_2:17665421-17665440 Msa0060080:intron 40.0%
GTGCAGTCATAACTTCAACT+GGG + chr1_2:17665468-17665487 None:intergenic 40.0%
AGTTATGACTGCACCAACAA+TGG - chr1_2:17665474-17665493 Msa0060080:intron 40.0%
GCCTATCTATCTTCATAGCA+AGG - chr1_2:17665543-17665562 Msa0060080:CDS 40.0%
TTCATAGCAAGGAAGGAGTT+TGG - chr1_2:17665554-17665573 Msa0060080:CDS 40.0%
AGTTTGGAGATCATCTGCTA+TGG - chr1_2:17665570-17665589 Msa0060080:CDS 40.0%
AACATGTTAGAGGGGGTAAT+TGG + chr1_2:17665652-17665671 None:intergenic 40.0%
! AAATAGCTCTGCAAAACTGC+AGG - chr1_2:17665684-17665703 Msa0060080:intron 40.0%
AGAAAGATCCTCCCTCAAAA+AGG - chr1_2:17665723-17665742 Msa0060080:CDS 40.0%
GATGCAACATGCAGTTCTAT+TGG - chr1_2:17665772-17665791 Msa0060080:CDS 40.0%
! CTTTTCAGAGACACTTCTGT+CGG + chr1_2:17665803-17665822 None:intergenic 40.0%
CAAGGTAATGCAGCCTTAAA+TGG - chr1_2:17665841-17665860 Msa0060080:intron 40.0%
GGAATTTCTCCTGATAAGGA+AGG - chr1_2:17665862-17665881 Msa0060080:intron 40.0%
GGAAAAGATCCTTCCTTATC+AGG + chr1_2:17665874-17665893 None:intergenic 40.0%
! GAGGAACCTGAGCTTTTAAA+GGG + chr1_2:17665918-17665937 None:intergenic 40.0%
CTTACCGCAATTTAAGGACA+TGG - chr1_2:17666038-17666057 Msa0060080:intron 40.0%
GTGGGTCCTGATAGTTTAAA+TGG - chr1_2:17666108-17666127 Msa0060080:CDS 40.0%
TTGTCATCGACCGTAATTTC+GGG + chr1_2:17666165-17666184 None:intergenic 40.0%
!! GGAATGCTTCTAGTTCTAGT+AGG - chr1_2:17666202-17666221 Msa0060080:CDS 40.0%
ACAGTAAACGGATCAAGTCA+AGG - chr1_2:17666228-17666247 Msa0060080:CDS 40.0%
CAGTAAACGGATCAAGTCAA+GGG - chr1_2:17666229-17666248 Msa0060080:CDS 40.0%
AGTAAACGGATCAAGTCAAG+GGG - chr1_2:17666230-17666249 Msa0060080:CDS 40.0%
!! ACTGTTCCATTTTCAAGCCT+TGG + chr1_2:17666327-17666346 None:intergenic 40.0%
GCTTGAAAATGGAACAGTCA+AGG - chr1_2:17666329-17666348 Msa0060080:CDS 40.0%
AAGCTGAGATGTTCTTGGTT+CGG - chr1_2:17666445-17666464 Msa0060080:CDS 40.0%
AAAGGTCACGGAATCTTCTT+TGG - chr1_2:17666494-17666513 Msa0060080:CDS 40.0%
!! TCATTCTCTCTTGGTGATGA+AGG + chr1_2:17666901-17666920 None:intergenic 40.0%
! AGTAGATTTTGTGGCATGCT+TGG - chr1_2:17667112-17667131 Msa0060080:CDS 40.0%
! GTAGATTTTGTGGCATGCTT+GGG - chr1_2:17667113-17667132 Msa0060080:CDS 40.0%
! TAGATTTTGTGGCATGCTTG+GGG - chr1_2:17667114-17667133 Msa0060080:CDS 40.0%
TCATTTAACCTTGGTTCCCT+TGG - chr1_2:17667197-17667216 Msa0060080:CDS 40.0%
CTTCAAAAATGTTCACACCG+TGG + chr1_2:17667953-17667972 None:intergenic 40.0%
TAGTCGTCAAACTACATACG+CGG + chr1_2:17668128-17668147 None:intergenic 40.0%
GTATGTAGTTTGACGACTAC+AGG - chr1_2:17668129-17668148 Msa0060080:intron 40.0%
CGTAAAGGTAAAGCAATTCC+AGG - chr1_2:17668239-17668258 Msa0060080:intron 40.0%
TCAATGAGGTGGTTGTTGAT+CGG - chr1_2:17668279-17668298 Msa0060080:intron 40.0%
GACAGATGTTCATGTCTTTC+AGG - chr1_2:17668497-17668516 Msa0060080:intron 40.0%
! GTTCATGTCTTTCAGGTACA+AGG - chr1_2:17668504-17668523 Msa0060080:intron 40.0%
AGTCATTGTTGGAACTCCTA+CGG - chr1_2:17668533-17668552 Msa0060080:intron 40.0%
!! GGGAAGTACTGCATATTCTA+CGG - chr1_2:17668554-17668573 Msa0060080:intron 40.0%
AAACTCCTACAAGCTTACCA+TGG + chr1_2:17668592-17668611 None:intergenic 40.0%
TATTTCAAGGCATGGATACC+AGG + chr1_2:17668648-17668667 None:intergenic 40.0%
! TGTTTGGGATGACATGGAAT+TGG + chr1_2:17668970-17668989 None:intergenic 40.0%
TAGTCGTCAAATTGATGTGC+TGG + chr1_2:17669006-17669025 None:intergenic 40.0%
AACTAGAGTAGACTAGGGTT+TGG - chr1_2:17669218-17669237 Msa0060080:intron 40.0%
!! CTGGTATTGATGCAAATGAC+TGG - chr1_2:17669314-17669333 Msa0060080:intron 40.0%
AACAATATGCACGGAACGTT+TGG + chr1_2:17669568-17669587 None:intergenic 40.0%
ACAGTGAATGTGGACAGATA+GGG + chr1_2:17669594-17669613 None:intergenic 40.0%
GGTCTAAATGACAGTGAATG+TGG + chr1_2:17669604-17669623 None:intergenic 40.0%
GATGCTCACTCATATGTATC+CGG + chr1_2:17669959-17669978 None:intergenic 40.0%
AGTTTGACCAAACAGGTGAT+TGG - chr1_2:17669997-17670016 Msa0060080:intron 40.0%
GGCAAACCCTATCTTTACAA+TGG + chr1_2:17670175-17670194 None:intergenic 40.0%
GTAAAGATAGGGTTTGCCAA+TGG - chr1_2:17670177-17670196 Msa0060080:CDS 40.0%
TCCTTTGATACTCAAAGCCC+AGG + chr1_2:17662615-17662634 None:intergenic 45.0%
CGCTTACTTGATTCTCGTGT+TGG + chr1_2:17663166-17663185 None:intergenic 45.0%
! AAGTAAGCGTAACGGAGATG+AGG - chr1_2:17663177-17663196 Msa0060080:intron 45.0%
TGATAGAAACCAGGCTTAGG+TGG - chr1_2:17663294-17663313 Msa0060080:intron 45.0%
AGTACGAAGAGCAGATCAGA+TGG - chr1_2:17663351-17663370 Msa0060080:intron 45.0%
GTCAGACCAAAAGAGGTAGA+TGG - chr1_2:17663380-17663399 Msa0060080:intron 45.0%
TTGTAGCCAACACCACTTAG+TGG - chr1_2:17663476-17663495 Msa0060080:intron 45.0%
TGTAGCCAACACCACTTAGT+GGG - chr1_2:17663477-17663496 Msa0060080:intron 45.0%
CAACCCATTATCCCACTAAG+TGG + chr1_2:17663491-17663510 None:intergenic 45.0%
ATGTAGCCAACACCACTTAG+TGG - chr1_2:17663530-17663549 Msa0060080:intron 45.0%
TGTAGCCAACACCACTTAGT+GGG - chr1_2:17663477-17663496 Msa0060080:intron 45.0%
CAACCCATTATCCCACTAAG+TGG + chr1_2:17663491-17663510 None:intergenic 45.0%
ACCCATACTCACATCTATCC+TGG - chr1_2:17663621-17663640 Msa0060080:intron 45.0%
CCCAGGATAGATGTGAGTAT+GGG + chr1_2:17663625-17663644 None:intergenic 45.0%
CCCATACTCACATCTATCCT+GGG - chr1_2:17663622-17663641 Msa0060080:intron 45.0%
TCCCAGGATAGATGTGAGTA+TGG + chr1_2:17663626-17663645 None:intergenic 45.0%
AACTCGGGAACTGAACAATG+TGG - chr1_2:17663736-17663755 Msa0060080:intron 45.0%
ACTCGGGAACTGAACAATGT+GGG - chr1_2:17663737-17663756 Msa0060080:intron 45.0%
ACCAAAAAACCTGGGAACCT+GGG - chr1_2:17663931-17663950 Msa0060080:intron 45.0%
ATTGAAGTCTCACATTGCCC+AGG + chr1_2:17663951-17663970 None:intergenic 45.0%
TCGACTTCAGCAATATCACC+CGG + chr1_2:17664764-17664783 None:intergenic 45.0%
CTGAAGTCGAGGCATATTGT+AGG - chr1_2:17664774-17664793 Msa0060080:intron 45.0%
! GGATCTTTAGGAACTCCGAA+AGG - chr1_2:17664795-17664814 Msa0060080:intron 45.0%
GCATTATGCAATCCGTTGAC+TGG - chr1_2:17664839-17664858 Msa0060080:intron 45.0%
ATGGTATCCCTCGTGAACAA+AGG - chr1_2:17664941-17664960 Msa0060080:intron 45.0%
GCTAATCTCTGCGTCAAGAA+AGG + chr1_2:17665008-17665027 None:intergenic 45.0%
! TTCTGAAAACGGCAAGTGGA+GGG + chr1_2:17665048-17665067 None:intergenic 45.0%
GGTGCAGTCATAACTTCAAC+TGG + chr1_2:17665469-17665488 None:intergenic 45.0%
CATCTGCTATGGTGTCTAGA+TGG - chr1_2:17665581-17665600 Msa0060080:CDS 45.0%
ATGTTAGAGGGGGTAATTGG+TGG + chr1_2:17665649-17665668 None:intergenic 45.0%
! GGAGGAACCTGAGCTTTTAA+AGG + chr1_2:17665919-17665938 None:intergenic 45.0%
TTGGAAAAGATATCCGGAGG+AGG + chr1_2:17665937-17665956 None:intergenic 45.0%
!!! TGTCCACATTTTTGGGTAGC+AGG - chr1_2:17665965-17665984 Msa0060080:intron 45.0%
CTTCCTGCTACCCAAAAATG+TGG + chr1_2:17665971-17665990 None:intergenic 45.0%
ATGGCTATTGGAAGACGTGA+AGG - chr1_2:17666057-17666076 Msa0060080:intron 45.0%
! GGAGATGTGGTTGTTTCCAA+TGG - chr1_2:17666078-17666097 Msa0060080:intron 45.0%
AGGACCCACAATAGTACCAT+TGG + chr1_2:17666097-17666116 None:intergenic 45.0%
GCTCATGTTGATCATCCATC+TGG - chr1_2:17666135-17666154 Msa0060080:CDS 45.0%
ATCTGGAGAGCCCGAAATTA+CGG - chr1_2:17666152-17666171 Msa0060080:CDS 45.0%
GAAAATGGAACAGTCAAGGC+CGG - chr1_2:17666333-17666352 Msa0060080:CDS 45.0%
AAAATGGAACAGTCAAGGCC+GGG - chr1_2:17666334-17666353 Msa0060080:CDS 45.0%
TTCATCGCGTAAAGCTAACC+CGG + chr1_2:17666355-17666374 None:intergenic 45.0%
AGCTTTACGCGATGAAGAGT+TGG - chr1_2:17666359-17666378 Msa0060080:CDS 45.0%
GCTTTACGCGATGAAGAGTT+GGG - chr1_2:17666360-17666379 Msa0060080:CDS 45.0%
!! ATGTTCTTGGTTCGGACAGA+TGG - chr1_2:17666453-17666472 Msa0060080:CDS 45.0%
CTCAGCAACAGATGCTTATG+TGG - chr1_2:17666535-17666554 Msa0060080:CDS 45.0%
AAAGCTTGGGGACGAACTAT+TGG - chr1_2:17666590-17666609 Msa0060080:CDS 45.0%
GCAAGTACATCATGCACATC+AGG + chr1_2:17666938-17666957 None:intergenic 45.0%
GATGTACTTGCCAGAATTCC+AGG - chr1_2:17666947-17666966 Msa0060080:CDS 45.0%
! CTTGCCAGAATTCCAGGTTT+TGG - chr1_2:17666953-17666972 Msa0060080:CDS 45.0%
GTCTGCACAAATCCAAAACC+TGG + chr1_2:17666968-17666987 None:intergenic 45.0%
! AGATTTTGTGGCATGCTTGG+GGG - chr1_2:17667115-17667134 Msa0060080:CDS 45.0%
TCAGAAAACCAAGGGAACCA+AGG + chr1_2:17667208-17667227 None:intergenic 45.0%
CACGGAAATACTTCACGAGA+TGG - chr1_2:17668173-17668192 Msa0060080:intron 45.0%
GATCAACAACCACCTCATTG+AGG + chr1_2:17668280-17668299 None:intergenic 45.0%
CAATGAGGTGGTTGTTGATC+GGG - chr1_2:17668280-17668299 Msa0060080:intron 45.0%
AATGAGGTGGTTGTTGATCG+GGG - chr1_2:17668281-17668300 Msa0060080:intron 45.0%
! GTCTTTCAGGTACAAGGTGA+TGG - chr1_2:17668510-17668529 Msa0060080:intron 45.0%
!! CAAGGTGATGGAGTCATTGT+TGG - chr1_2:17668522-17668541 Msa0060080:intron 45.0%
GTCATTGTTGGAACTCCTAC+GGG - chr1_2:17668534-17668553 Msa0060080:intron 45.0%
GAATATGCAGTACTTCCCGT+AGG + chr1_2:17668552-17668571 None:intergenic 45.0%
AGGTTCCATGGTAAGCTTGT+AGG - chr1_2:17668584-17668603 Msa0060080:intron 45.0%
GGCGCTATGAATAAGACTCA+TGG - chr1_2:17668741-17668760 Msa0060080:intron 45.0%
AGACTCATGGTCAATCGTGA+AGG - chr1_2:17668754-17668773 Msa0060080:intron 45.0%
CTCAAAGACCTCTACTTAGC+TGG - chr1_2:17669149-17669168 Msa0060080:intron 45.0%
ATATGCACGGAACGTTTGGA+TGG + chr1_2:17669564-17669583 None:intergenic 45.0%
CAGTGAATGTGGACAGATAG+GGG + chr1_2:17669593-17669612 None:intergenic 45.0%
GACAGTGAATGTGGACAGAT+AGG + chr1_2:17669595-17669614 None:intergenic 45.0%
! GCAGAATCTGGAAGTATGAC+AGG + chr1_2:17669625-17669644 None:intergenic 45.0%
GCGTTACTTCTAGCATCTTC+TGG + chr1_2:17669882-17669901 None:intergenic 45.0%
AAGATGCTAGAAGTAACGCG+TGG - chr1_2:17669883-17669902 Msa0060080:intron 45.0%
AGATGCTAGAAGTAACGCGT+GGG - chr1_2:17669884-17669903 Msa0060080:intron 45.0%
AGAAGACAACAGCTCTCAAG+AGG - chr1_2:17669924-17669943 Msa0060080:intron 45.0%
! GCTTGATTCGCTGCCTAAAT+TGG - chr1_2:17670027-17670046 Msa0060080:CDS 45.0%
CAAGCCTCTCGTTCCAATTT+AGG + chr1_2:17670043-17670062 None:intergenic 45.0%
GAACGAGAGGCTTGATCAAA+AGG - chr1_2:17670049-17670068 Msa0060080:CDS 45.0%
!! AAAAAAAAATTAAAAAAATG+CGG + chr1_2:17664593-17664612 None:intergenic 5.0%
!!! TATAAGTAAATTTTTTTTAT+AGG - chr1_2:17667705-17667724 Msa0060080:CDS 5.0%
!!! ATAAGTAAATTTTTTTTATA+GGG - chr1_2:17667706-17667725 Msa0060080:CDS 5.0%
!! GCCTGGGCTTTGAGTATCAA+AGG - chr1_2:17662611-17662630 Msa0060080:three_prime_UTR 50.0%
CGGAGATGAGGACATTGCAT+TGG - chr1_2:17663189-17663208 Msa0060080:intron 50.0%
CATGTCAAACCACCTAAGCC+TGG + chr1_2:17663306-17663325 None:intergenic 50.0%
ACGAAGAGCAGATCAGATGG+AGG - chr1_2:17663354-17663373 Msa0060080:intron 50.0%
GAGGAGAGTCAGACCAAAAG+AGG - chr1_2:17663373-17663392 Msa0060080:intron 50.0%
! AGGTCGCCATCTACCTCTTT+TGG + chr1_2:17663389-17663408 None:intergenic 50.0%
GTGTGAATTAGACTCGTCCC+AGG + chr1_2:17663642-17663661 None:intergenic 50.0%
CACCAAAAAACCTGGGAACC+TGG - chr1_2:17663930-17663949 Msa0060080:intron 50.0%
TCAGCAATATCACCCGGAAC+TGG + chr1_2:17664758-17664777 None:intergenic 50.0%
GGGTGATATTGCTGAAGTCG+AGG - chr1_2:17664763-17664782 Msa0060080:intron 50.0%
ACGCTACATTCCCCAGTCAA+CGG + chr1_2:17664854-17664873 None:intergenic 50.0%
GGAATGTAGCGTCTCGTATG+AGG - chr1_2:17664862-17664881 Msa0060080:intron 50.0%
TATCCCTCGTGAACAAAGGC+AGG - chr1_2:17664945-17664964 Msa0060080:intron 50.0%
ATCCCTCGTGAACAAAGGCA+GGG - chr1_2:17664946-17664965 Msa0060080:intron 50.0%
GGGACGATGTTCTTACTGGA+AGG - chr1_2:17664966-17664985 Msa0060080:intron 50.0%
CGCAGAGATTAGCGAGATTG+AGG - chr1_2:17665015-17665034 Msa0060080:intron 50.0%
! CTTCTGAAAACGGCAAGTGG+AGG + chr1_2:17665049-17665068 None:intergenic 50.0%
! TCGCTTCTGAAAACGGCAAG+TGG + chr1_2:17665052-17665071 None:intergenic 50.0%
!!! TTCTGGTTTTCCTCGTGGTG+AGG - chr1_2:17665189-17665208 Msa0060080:intron 50.0%
!!! TCTGGTTTTCCTCGTGGTGA+GGG - chr1_2:17665190-17665209 Msa0060080:intron 50.0%
!! GAAACGGCTTTTTGGACTGG+TGG - chr1_2:17665295-17665314 Msa0060080:intron 50.0%
GGTGGTCAGGTAACAGAAGA+AGG - chr1_2:17665313-17665332 Msa0060080:intron 50.0%
GACTGCACCAACAATGGAAC+AGG - chr1_2:17665480-17665499 Msa0060080:intron 50.0%
CTCGCAACCTGTTCCATTGT+TGG + chr1_2:17665490-17665509 None:intergenic 50.0%
CAACAATGGAACAGGTTGCG+AGG - chr1_2:17665488-17665507 Msa0060080:intron 50.0%
CTGCTATGGTGTCTAGATGG+AGG - chr1_2:17665584-17665603 Msa0060080:CDS 50.0%
AAAAGCTCAGGTTCCTCCTC+CGG - chr1_2:17665921-17665940 Msa0060080:intron 50.0%
TGGAAGACGTGAAGGAGATG+TGG - chr1_2:17666065-17666084 Msa0060080:intron 50.0%
GTAATTTCGGGCTCTCCAGA+TGG + chr1_2:17666153-17666172 None:intergenic 50.0%
ATTCACAACGGCAGAGACGT+CGG + chr1_2:17666277-17666296 None:intergenic 50.0%
GAAGAGTTGGGATCCCTTGA+AGG - chr1_2:17666372-17666391 Msa0060080:CDS 50.0%
CGCACACATATCGCCTTCAA+GGG + chr1_2:17666388-17666407 None:intergenic 50.0%
ACGCACACATATCGCCTTCA+AGG + chr1_2:17666389-17666408 None:intergenic 50.0%
CGATATGTGTGCGTCGTCAA+CGG - chr1_2:17666395-17666414 Msa0060080:CDS 50.0%
GATATGTGTGCGTCGTCAAC+GGG - chr1_2:17666396-17666415 Msa0060080:CDS 50.0%
GTCGTCAACGGGAGTTGTAA+GGG - chr1_2:17666407-17666426 Msa0060080:CDS 50.0%
AGCATCTGTTGCTGAGTGCT+AGG + chr1_2:17666531-17666550 None:intergenic 50.0%
! GATTTTGTGGCATGCTTGGG+GGG - chr1_2:17667116-17667135 Msa0060080:CDS 50.0%
ACTGCATATTCTACGGCTGC+TGG - chr1_2:17668561-17668580 Msa0060080:intron 50.0%
! GTCACTTGGTGAGTGACAGT+GGG + chr1_2:17668717-17668736 None:intergenic 50.0%
! AGTCACTTGGTGAGTGACAG+TGG + chr1_2:17668718-17668737 None:intergenic 50.0%
TGTCACTCACCAAGTGACTG+CGG - chr1_2:17668719-17668738 Msa0060080:intron 50.0%
CTTGCACTCCAGCTAAGTAG+AGG + chr1_2:17669160-17669179 None:intergenic 50.0%
TCTCAAGAGGAGACTCAGTC+CGG - chr1_2:17669937-17669956 Msa0060080:intron 50.0%
TGCGGAACCAATCACCTGTT+TGG + chr1_2:17670007-17670026 None:intergenic 50.0%
TTAGGCAGCGAATCAAGCTG+CGG + chr1_2:17670025-17670044 None:intergenic 50.0%
GCTGCCTAAATTGGAACGAG+AGG - chr1_2:17670036-17670055 Msa0060080:CDS 50.0%
TAGATTCCTAGGCTTGGGCC+TGG - chr1_2:17662594-17662613 Msa0060080:three_prime_UTR 55.0%
AGATTCCTAGGCTTGGGCCT+GGG - chr1_2:17662595-17662614 Msa0060080:three_prime_UTR 55.0%
!!! GCCCAGGTTCCCAGGTTTTT+TGG + chr1_2:17663935-17663954 None:intergenic 55.0%
GTCCCTGCCTTTGTTCACGA+GGG + chr1_2:17664951-17664970 None:intergenic 55.0%
GGCAGGGACGATGTTCTTAC+TGG - chr1_2:17664962-17664981 Msa0060080:intron 55.0%
!!! GGCTTTTTGGACTGGTGGTC+AGG - chr1_2:17665300-17665319 Msa0060080:intron 55.0%
CGTCGTCAACGGGAGTTGTA+AGG - chr1_2:17666406-17666425 Msa0060080:CDS 55.0%
GCATATTCTACGGCTGCTGG+AGG - chr1_2:17668564-17668583 Msa0060080:intron 55.0%
! ACTTGGTGAGTGACAGTGGG+TGG + chr1_2:17668714-17668733 None:intergenic 55.0%
GTCACTCACCAAGTGACTGC+GGG - chr1_2:17668720-17668739 Msa0060080:intron 55.0%
CACCTTCGGGCTTGACTCTC+CGG - chr1_2:17662705-17662724 Msa0060080:CDS 60.0%
TACCGGAGAGTCAAGCCCGA+AGG + chr1_2:17662710-17662729 None:intergenic 60.0%
ATCCACCCTCACGCCTAGCA+CGG - chr1_2:17663789-17663808 Msa0060080:intron 60.0%
TTGGACACATGCCCCGTGCT+AGG + chr1_2:17663805-17663824 None:intergenic 60.0%
CTCACATTGCCCAGGTTCCC+AGG + chr1_2:17663943-17663962 None:intergenic 60.0%
CGTCCCTGCCTTTGTTCACG+AGG + chr1_2:17664952-17664971 None:intergenic 60.0%
CAGGGATAACCCTCACCACG+AGG + chr1_2:17665202-17665221 None:intergenic 60.0%
TACGGCTGCTGGAGGTTCCA+TGG - chr1_2:17668572-17668591 Msa0060080:intron 60.0%
TCATAGCGCCCGCAGTCACT+TGG + chr1_2:17668731-17668750 None:intergenic 60.0%
AACGCGTGGGTCTCGTTCGA+TGG - chr1_2:17669897-17669916 Msa0060080:intron 60.0%
CAAAGCCCAGGCCCAAGCCT+AGG + chr1_2:17662603-17662622 None:intergenic 65.0%
TCCACCCTCACGCCTAGCAC+GGG - chr1_2:17663790-17663809 Msa0060080:intron 65.0%
ATGCCCCGTGCTAGGCGTGA+GGG + chr1_2:17663797-17663816 None:intergenic 65.0%
GTCGTGGAGGGGACCAGTTC+CGG - chr1_2:17664742-17664761 Msa0060080:intron 65.0%
TCGTGGAGGGGACCAGTTCC+GGG - chr1_2:17664743-17664762 Msa0060080:intron 65.0%
GTGGCATGCTTGGGGGGTGA+CGG - chr1_2:17667122-17667141 Msa0060080:CDS 65.0%
CCACCCTCACGCCTAGCACG+GGG - chr1_2:17663791-17663810 Msa0060080:intron 70.0%
CATGCCCCGTGCTAGGCGTG+AGG + chr1_2:17663798-17663817 None:intergenic 70.0%
CCCCGTGCTAGGCGTGAGGG+TGG + chr1_2:17663794-17663813 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 17662321 17670404 17662321 ID=Msa0060080;Name=Msa0060080
chr1_2 mRNA 17662321 17670404 17662321 ID=Msa0060080-mRNA-1;Parent=Msa0060080;Name=Msa0060080-mRNA-1;_AED=0.05;_eAED=0.05;_QI=158|0.87|0.88|1|0.87|0.77|9|325|991
chr1_2 exon 17662321 17662849 17662321 ID=Msa0060080-mRNA-1:exon:6821;Parent=Msa0060080-mRNA-1
chr1_2 exon 17663065 17663166 17663065 ID=Msa0060080-mRNA-1:exon:6820;Parent=Msa0060080-mRNA-1
chr1_2 exon 17664132 17664206 17664132 ID=Msa0060080-mRNA-1:exon:6819;Parent=Msa0060080-mRNA-1
chr1_2 exon 17664364 17664588 17664364 ID=Msa0060080-mRNA-1:exon:6818;Parent=Msa0060080-mRNA-1
chr1_2 exon 17665532 17665628 17665532 ID=Msa0060080-mRNA-1:exon:6817;Parent=Msa0060080-mRNA-1
chr1_2 exon 17665717 17665838 17665717 ID=Msa0060080-mRNA-1:exon:6816;Parent=Msa0060080-mRNA-1
chr1_2 exon 17666099 17668021 17666099 ID=Msa0060080-mRNA-1:exon:6815;Parent=Msa0060080-mRNA-1
chr1_2 exon 17669999 17670244 17669999 ID=Msa0060080-mRNA-1:exon:6814;Parent=Msa0060080-mRNA-1
chr1_2 exon 17670265 17670404 17670265 ID=Msa0060080-mRNA-1:exon:6813;Parent=Msa0060080-mRNA-1
chr1_2 five_prime_UTR 17670265 17670404 17670265 ID=Msa0060080-mRNA-1:five_prime_utr;Parent=Msa0060080-mRNA-1
chr1_2 five_prime_UTR 17670227 17670244 17670227 ID=Msa0060080-mRNA-1:five_prime_utr;Parent=Msa0060080-mRNA-1
chr1_2 CDS 17669999 17670226 17669999 ID=Msa0060080-mRNA-1:cds;Parent=Msa0060080-mRNA-1
chr1_2 CDS 17666099 17668021 17666099 ID=Msa0060080-mRNA-1:cds;Parent=Msa0060080-mRNA-1
chr1_2 CDS 17665717 17665838 17665717 ID=Msa0060080-mRNA-1:cds;Parent=Msa0060080-mRNA-1
chr1_2 CDS 17665532 17665628 17665532 ID=Msa0060080-mRNA-1:cds;Parent=Msa0060080-mRNA-1
chr1_2 CDS 17664364 17664588 17664364 ID=Msa0060080-mRNA-1:cds;Parent=Msa0060080-mRNA-1
chr1_2 CDS 17664132 17664206 17664132 ID=Msa0060080-mRNA-1:cds;Parent=Msa0060080-mRNA-1
chr1_2 CDS 17663065 17663166 17663065 ID=Msa0060080-mRNA-1:cds;Parent=Msa0060080-mRNA-1
chr1_2 CDS 17662646 17662849 17662646 ID=Msa0060080-mRNA-1:cds;Parent=Msa0060080-mRNA-1
chr1_2 three_prime_UTR 17662321 17662645 17662321 ID=Msa0060080-mRNA-1:three_prime_utr;Parent=Msa0060080-mRNA-1
Gene Sequence

>Msa0060080

ATGGTAGCATGTATCGACATGGCATTCTCCGTAGTTCATTCAACTTCTTCTTATCCATGTTTGTTCTCAAACTCTTCTCCATTCTTCACCAACAATAGATTCCTAGGCTTGGGCCTGGGCTTTGAGTATCAAAGGAAAGGAAGAAGGATACTAAGGAGACATGTCAAGTTTGTTATCAGTGCACAGCTTTCCAAGTCATTTTCATTCACCTTCGGGCTTGACTCTCCGAATTTGAATTCCTTCCAATCCCATGATCTATCAAAATTGTCGTGGAGGGGACCAGTTCCGGGTGATATTGCTGAAGTCGAGGCATATTGTAGGATCTTTAGGAACTCCGAAAGGCTTCATTCTGCATTAATGGATGCATTATGCAATCCGTTGACTGGGGAATGTAGCGTCTCGTATGAGGTTTCATCAGATGAGAAACCTCAACTTGAAGATAAAATAGTTTCTGTTCTTGGATGCATGGTATCCCTCGTGAACAAAGGCAGGGACGATGTTCTTACTGGAAGGTCCTCAATTATGAACCCCTTTCTTGACGCAGAGATTAGCGAGATTGAGGATAAGCTCCCTCCACTTGCCGTTTTCAGAAGCGAGATGAAAAGGTGTTCCGAGAGTTTACATGTTGCCCTTCAGAATTATTTAATGCCTGATGATGATCGGAGCTTAAATGTATGGAGGAAACTTCAGAAACTGAAGAATGTCTGCTATGATTCTGGTTTTCCTCGTGGTGAGGGTTATCCCTGTCCTACACTATTTGCTAATTGGTGTCCTGTATATTTTTCTTCTTCTAAAGAAGACACGGAGTCTGAAGAATTAGAAACGGCTTTTTGGACTGGTGGTCAGGTAACAGAAGAAGGACTAACGTGGTTACTAGATAAAGGATATAAAACAATTATAGATATCAGAGCCGAGACTGTAAGAGACAATTTCTATCAAGCGGCCGTGAACGATGCTATTTCATCTGGCAAAATTAATTTAGTAAAAATCCCAGTTGAAGTTATGACTGCACCAACAATGGAACAGGTTGCGAGGTTTGCATCTTATGTTACAGATAGCAGCAAAAGGCCTATCTATCTTCATAGCAAGGAAGGAGTTTGGAGATCATCTGCTATGGTGTCTAGATGGAGGCAGTATATGACTCGCTCTTCGTCACAGAATGTTTCTAGTCCACCAATTACCCCCTCTAACATGTTATCACATTCTACAAATAGCTCTGCAAAACTGCAGGATTCTTCAGCGACTGCAGAAAGATCCTCCCTCAAAAAGGATATTACTTCTGTGCAAGACAACTTCGATGCAACATGCAGTTCTATTGGAACATCCGACAGAAGTGTCTCTGAAAAGAAGTATGATGAGAAAACACAAGGTAATGCAGCCTTAAATGGAATTTCTCCTGATAAGGAAGGATCTTTTCCAAGTTTTTCCAGCAAGATTAACCCTTTAAAAGCTCAGGTTCCTCCTCCGGATATCTTTTCCAAAAAAGCGATGTCCACATTTTTGGGTAGCAGGAAGATCTCACCTCCCGATTATGTCAATTATCAAATCAAAAGGGCGAAATTCTTACCGCAATTTAAGGACATGGCTATTGGAAGACGTGAAGGAGATGTGGTTGTTTCCAATGGTACTATTGTGGGTCCTGATAGTTTAAATGGATCAGCTCATGTTGATCATCCATCTGGAGAGCCCGAAATTACGGTCGATGACAATCAAAAGTCTGTGAATGGGAATGCTTCTAGTTCTAGTAGGACAACAGTAAACGGATCAAGTCAAGGGGAATTACATTACATGGCTAATGCCGACGTCTCTGCCGTTGTGAATAATAATAATAATGTAACAACAAAATCTCCAAGGCTTGAAAATGGAACAGTCAAGGCCGGGTTAGCTTTACGCGATGAAGAGTTGGGATCCCTTGAAGGCGATATGTGTGCGTCGTCAACGGGAGTTGTAAGGGTGCAGTCAAGAAAGAAAGCTGAGATGTTCTTGGTTCGGACAGATGGATTTTCTTGTACTAGAGAAAAGGTCACGGAATCTTCTTTGGCTTTCACTCATCCTAGCACTCAGCAACAGATGCTTATGTGGAAGTCTACACCAAAGAATGTGCTGTTGTTAAAAAAGCTTGGGGACGAACTATTGGAAGAAGCAAAAATGGTTGCTAATTTCCTTCATCACCAAGAGAGAATGAATGTTATTGTGGAACCTGATGTGCATGATGTACTTGCCAGAATTCCAGGTTTTGGATTTGTGCAGACCTTTTACAGTCATGATACAAGTGATCTCCATGAGAAAGTAGATTTTGTGGCATGCTTGGGGGGTGACGGCGTTATACTGCATGCATCAAATCTATTCAGAGATGCTGTTCCCCCTATTTTTGACGACTACAGGCAAGACTTAAGACAAGTCATTCACGGAAATACTTCACGAGATGGTGTCTACATTACTCTTAGGATGCGTCTCCGATGTGAAATTTTTCGTAAAGGTAAAGCAATTCCAGGGAAAGTATTTGATATCCTCAATGAGGTGGTTGTTGATCGGGGTTCTAATCCATACCTTTCAAAGATTGAATGCTATGAACATGATCACCTTATAACCAAAGTACAAGGTGATGGAGTCATTGTTGGAACTCCTACGGGAAGTACTGCATATTCTACGGCTGCTGGAGGTTCCATGGTCCATCCAAACGTTCCGTGCATATTGTTTACCCCTATCTGTCCACATTCACTGTCATTTAGACCTGTCATACTTCCAGATTCTGCTCGATTAGAATTAAAGATTCCAGAAGATGCTAGAAGTAACGCGTGGGTCTCGTTCGATGGAAAAAGAAGACAACAGCTCTCAAGAGGAGACTCAGTCCGGATACATATGAGTGAGCATCCCCTTCCAACTGTTAACAAGTTTGACCAAACAGGTGATTGGTTCCGCAGCTTGATTCGCTGCCTAAATTGGAACGAGAGGCTTGATCAAAAGGCTCTATAA
Protein sequence

>Msa0060080

MVACIDMAFSVVHSTSSYPCLFSNSSPFFTNNRFLGLGLGFEYQRKGRRILRRHVKFVISAQLSKSFSFTFGLDSPNLNSFQSHDLSKLSWRGPVPGDIAEVEAYCRIFRNSERLHSALMDALCNPLTGECSVSYEVSSDEKPQLEDKIVSVLGCMVSLVNKGRDDVLTGRSSIMNPFLDAEISEIEDKLPPLAVFRSEMKRCSESLHVALQNYLMPDDDRSLNVWRKLQKLKNVCYDSGFPRGEGYPCPTLFANWCPVYFSSSKEDTESEELETAFWTGGQVTEEGLTWLLDKGYKTIIDIRAETVRDNFYQAAVNDAISSGKINLVKIPVEVMTAPTMEQVARFASYVTDSSKRPIYLHSKEGVWRSSAMVSRWRQYMTRSSSQNVSSPPITPSNMLSHSTNSSAKLQDSSATAERSSLKKDITSVQDNFDATCSSIGTSDRSVSEKKYDEKTQGNAALNGISPDKEGSFPSFSSKINPLKAQVPPPDIFSKKAMSTFLGSRKISPPDYVNYQIKRAKFLPQFKDMAIGRREGDVVVSNGTIVGPDSLNGSAHVDHPSGEPEITVDDNQKSVNGNASSSSRTTVNGSSQGELHYMANADVSAVVNNNNNVTTKSPRLENGTVKAGLALRDEELGSLEGDMCASSTGVVRVQSRKKAEMFLVRTDGFSCTREKVTESSLAFTHPSTQQQMLMWKSTPKNVLLLKKLGDELLEEAKMVANFLHHQERMNVIVEPDVHDVLARIPGFGFVQTFYSHDTSDLHEKVDFVACLGGDGVILHASNLFRDAVPPIFDDYRQDLRQVIHGNTSRDGVYITLRMRLRCEIFRKGKAIPGKVFDILNEVVVDRGSNPYLSKIECYEHDHLITKVQGDGVIVGTPTGSTAYSTAAGGSMVHPNVPCILFTPICPHSLSFRPVILPDSARLELKIPEDARSNAWVSFDGKRRQQLSRGDSVRIHMSEHPLPTVNKFDQTGDWFRSLIRCLNWNERLDQKAL*