AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0379590


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0379590 MtrunA17_Chr3g0132621 96.471 425 3 4 1 416 1 422 0.0 791
Msa0379590 MtrunA17_Chr0c02g0489751 59.810 316 123 2 96 408 106 420 1.83e-120 357
Msa0379590 MtrunA17_Chr5g0441721 56.615 325 136 3 92 413 106 428 2.50e-115 344
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0379590 AT4G24460.2 59.360 406 145 5 13 414 40 429 6.53e-150 432
Msa0379590 AT4G24460.1 59.360 406 145 5 13 414 40 429 6.53e-150 432
Msa0379590 AT4G24460.4 68.013 297 90 3 122 414 6 301 2.05e-126 367
Msa0379590 AT5G12170.2 50.278 360 173 3 62 416 85 443 1.65e-112 337
Msa0379590 AT5G19380.1 55.215 326 141 3 92 414 115 438 1.08e-108 327
Msa0379590 AT4G24460.3 57.196 271 101 2 13 283 40 295 5.07e-94 285
Msa0379590 AT5G19380.2 53.041 296 134 3 122 414 205 498 4.83e-89 279
Msa0379590 AT5G12170.3 50.000 224 110 1 62 283 85 308 1.46e-68 220

Find 103 sgRNAs with CRISPR-Local

Find 815 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGCTTTGGGATTGGTTTC+TGG 0.120703 3_1:+80766694 Msa0379590:CDS
CTCGCTCAGTTAAATACTTT+TGG 0.128168 3_1:+80766457 Msa0379590:CDS
TTCAAGTATTATTTATTTCT+TGG 0.188554 3_1:-80777850 None:intergenic
TGATTCTTCCACTCGATTAA+AGG 0.194465 3_1:+80774896 Msa0379590:CDS
AAGACATTGAATTTGAATTT+AGG 0.216001 3_1:-80766204 None:intergenic
CCTTTCAAGTTCGAGATTAA+AGG 0.220084 3_1:-80776299 None:intergenic
ATATTTGTGGTCAATTCTTT+TGG 0.244958 3_1:+80775061 Msa0379590:CDS
CCTAATTTGTTTGTTTCTTA+AGG 0.245903 3_1:+80777799 Msa0379590:three_prime_UTR
TAGAAACAGACGAATGTTAT+TGG 0.270530 3_1:+80777743 Msa0379590:three_prime_UTR
CCTTAAGAAACAAACAAATT+AGG 0.283394 3_1:-80777799 None:intergenic
GAAAGAACATAAACAGAAAT+TGG 0.285954 3_1:-80777408 None:intergenic
CTAGTAAACACCCAACAATT+TGG 0.286774 3_1:-80773646 None:intergenic
TGAGATTGGAAGAAGGTAAA+TGG 0.314610 3_1:-80766261 None:intergenic
GGATATGTTGAATGCCAAAT+TGG 0.318336 3_1:-80777186 None:intergenic
CCTTCTGCAGCAATACTTCC+TGG 0.340512 3_1:+80767231 Msa0379590:intron
GCTCTACGTAGTTACCAATT+TGG 0.341292 3_1:+80777172 Msa0379590:CDS
TTAAGATACCTGATTCAGTA+TGG 0.349360 3_1:-80767265 None:intergenic
TCTCTCATGTTAATGTTGTC+AGG 0.366358 3_1:+80777248 Msa0379590:CDS
TTGGTTTCTGGAATGTCTGC+TGG 0.367012 3_1:+80766706 Msa0379590:CDS
CTCAATGTTGTTCCTCCCTC+TGG 0.372128 3_1:-80777450 None:intergenic
AATAAATAGCTGCTGTGTTT+CGG 0.374482 3_1:-80777766 None:intergenic
GGTTGTGCAATTCTTGTATG+TGG 0.381956 3_1:+80777489 Msa0379590:CDS
GTTCCTCCCTCTGGAAGATA+TGG 0.395626 3_1:-80777441 None:intergenic
TACTCAATTAACCAAATTGT+TGG 0.413438 3_1:+80773635 Msa0379590:CDS
CTTCTTCCTCTTCTTCCGAT+TGG 0.414737 3_1:+80766317 Msa0379590:CDS
TTTCTTGTGCCTTTCAAGCC+GGG 0.416884 3_1:+80774762 Msa0379590:CDS
AAGAGGAAGAAGATGAAGAT+TGG 0.420245 3_1:-80766306 None:intergenic
GTTTCTATATATTATTCGTA+TGG 0.423546 3_1:-80777727 None:intergenic
AACTGTTCGATGTTTGAGAT+TGG 0.429811 3_1:-80766275 None:intergenic
GTTTCTTGTGCCTTTCAAGC+CGG 0.433816 3_1:+80774761 Msa0379590:CDS
TATGAAGGTAGTTGAACAAA+TGG 0.440286 3_1:-80776326 None:intergenic
TTGAGCCCATTCTTTCTGCT+TGG 0.441026 3_1:+80777468 Msa0379590:CDS
AGTCATACCCATACTGAATC+AGG 0.447602 3_1:+80767257 Msa0379590:CDS
CATTTGTAACAATTCCTAAC+CGG 0.463982 3_1:-80766624 None:intergenic
AGAAATAAATAATACTTGAA+TGG 0.468095 3_1:+80777853 Msa0379590:three_prime_UTR
TATTGAAGCCCCGGCTTGAA+AGG 0.470016 3_1:-80774771 None:intergenic
TTGTATATACGATACCGGTT+AGG 0.473327 3_1:+80766610 Msa0379590:CDS
TACGTAGAGCAGCGGAAGCA+AGG 0.473417 3_1:-80777159 None:intergenic
ACTCAATTAACCAAATTGTT+GGG 0.477654 3_1:+80773636 Msa0379590:CDS
TGCTTTCTAAACATTGGAGC+TGG 0.479516 3_1:+80776368 Msa0379590:CDS
GCACAACCAAGCAGAAAGAA+TGG 0.481261 3_1:-80777474 None:intergenic
GTAACTACAAAATACTTGAA+TGG 0.482500 3_1:+80777821 Msa0379590:three_prime_UTR
AGCCGGGGCTTCAATAATCA+AGG 0.484105 3_1:+80774778 Msa0379590:CDS
AGCTACTAGCGTGTGAGCTA+TGG 0.484263 3_1:+80766099 Msa0379590:exon
TCATATCTTAAAAGTGGTGC+TGG 0.489401 3_1:+80776344 Msa0379590:CDS
TTTCTATATATTATTCGTAT+GGG 0.494241 3_1:-80777726 None:intergenic
AGCAAGCCATACCTGAAATC+CGG 0.494536 3_1:-80775086 None:intergenic
TGAAGAAGAATTGAATAAGA+AGG 0.502709 3_1:-80766134 None:intergenic
GTTGTGCAATTCTTGTATGT+GGG 0.502963 3_1:+80777490 Msa0379590:CDS
AACCTTGATTATTGAAGCCC+CGG 0.504691 3_1:-80774780 None:intergenic
GCTGGTTGCTTTCTAAACAT+TGG 0.506289 3_1:+80776362 Msa0379590:CDS
CCTTTAATCTCGAACTTGAA+AGG 0.507439 3_1:+80776299 Msa0379590:CDS
TAGAGCACCAACTGCCAAGC+TGG 0.508641 3_1:-80777606 None:intergenic
CCGCTCTTATCCTGAGGAGA+AGG 0.510554 3_1:+80773612 Msa0379590:CDS
TGAACTATTCCTAGCAGGTC+GGG 0.512908 3_1:-80777532 None:intergenic
TAATTGAGTACCTTCTCCTC+AGG 0.515619 3_1:-80773622 None:intergenic
GGGTGTTTACTAGTAGCTGC+TGG 0.518256 3_1:+80773656 Msa0379590:CDS
CGATGTTTGAGATTGGAAGA+AGG 0.518593 3_1:-80766268 None:intergenic
CTACCTTCATATCTTAAAAG+TGG 0.521293 3_1:+80776338 Msa0379590:CDS
TTCCATGTCTCAGGTTGTGA+TGG 0.521911 3_1:+80777131 Msa0379590:intron
CCCTCTGGAAGATATGGTAA+TGG 0.526764 3_1:-80777435 None:intergenic
ACGTAGAGCAGCGGAAGCAA+GGG 0.527253 3_1:-80777158 None:intergenic
TGATTCAGTATGGGTATGAC+TGG 0.530872 3_1:-80767255 None:intergenic
CACAACCAAGCAGAAAGAAT+GGG 0.531963 3_1:-80777473 None:intergenic
AGATGCTTGCAATTCCCAAA+TGG 0.535984 3_1:+80766647 Msa0379590:CDS
AGTATGGGTATGACTGGTCC+AGG 0.541278 3_1:-80767249 None:intergenic
TTTAGTTGCAGTGGACCAAT+CGG 0.544800 3_1:-80766332 None:intergenic
CAAGAAACTATCATCAATGC+TGG 0.545221 3_1:-80774746 None:intergenic
AATTGCAGTGGCTCTAATGC+AGG 0.547753 3_1:+80774692 Msa0379590:intron
CTGAACTATTCCTAGCAGGT+CGG 0.555048 3_1:-80777533 None:intergenic
AAAGTCGTTGGATATATTTG+TGG 0.558378 3_1:+80775048 Msa0379590:CDS
TTGTGTGCAGCAAAAGTCGT+TGG 0.560938 3_1:+80775036 Msa0379590:intron
ACTTCTGAACTATTCCTAGC+AGG 0.562912 3_1:-80777537 None:intergenic
GGCAGTTGGTGCTCTAACCA+TGG 0.564831 3_1:+80777613 Msa0379590:three_prime_UTR
CTGGAAGATATGGTAATGGA+AGG 0.565937 3_1:-80777431 None:intergenic
TAAGATACCTGATTCAGTAT+GGG 0.575392 3_1:-80767264 None:intergenic
ACAACACAACCCGACCTGCT+AGG 0.576941 3_1:+80777523 Msa0379590:CDS
AAAGCATACCTTTAATCGAG+TGG 0.578667 3_1:-80774904 None:intergenic
TACAGCAGGACTATGGATTG+TGG 0.580233 3_1:+80766055 None:intergenic
AATGATCTGATGGCAAAATG+AGG 0.581582 3_1:-80777651 None:intergenic
CTGAGGAGAAAATACCAGCT+TGG 0.587012 3_1:+80777592 Msa0379590:three_prime_UTR
AGCTAAAGAAACGGTAGTTG+CGG 0.587528 3_1:-80766374 None:intergenic
TGCTTGCAATTCCCAAATGG+CGG 0.588861 3_1:+80766650 Msa0379590:CDS
GATAATTACTCATAGGAACA+AGG 0.590033 3_1:-80766426 None:intergenic
CAAAAGTATTTAACTGAGCG+AGG 0.592533 3_1:-80766456 None:intergenic
ATTGGAAGAAGGTAAATGGA+AGG 0.593145 3_1:-80766257 None:intergenic
GTGTTGTGATTGCTATCTCA+AGG 0.596579 3_1:+80773678 Msa0379590:CDS
TTCTTGTGCCTTTCAAGCCG+GGG 0.607320 3_1:+80774763 Msa0379590:CDS
ATTAGCAACAGCTAAAGAAA+CGG 0.609692 3_1:-80766383 None:intergenic
CCATTACCATATCTTCCAGA+GGG 0.609985 3_1:+80777435 Msa0379590:CDS
GAAAATACCAGCTTGGCAGT+TGG 0.613549 3_1:+80777599 Msa0379590:three_prime_UTR
AGTGGACCAATCGGAAGAAG+AGG 0.617572 3_1:-80766323 None:intergenic
TGGAAGATATGGTAATGGAA+GGG 0.620700 3_1:-80777430 None:intergenic
ATAATTACTCATAGGAACAA+GGG 0.620764 3_1:-80766425 None:intergenic
TTGGAAGAAGGTAAATGGAA+GGG 0.622390 3_1:-80766256 None:intergenic
TCCATTACCATATCTTCCAG+AGG 0.626250 3_1:+80777434 Msa0379590:CDS
TCTCTAAAGTTGATTTCGTG+TGG 0.626579 3_1:+80774723 Msa0379590:CDS
TAAAGAAACGGTAGTTGCGG+AGG 0.630160 3_1:-80766371 None:intergenic
GTTTCTGGAATGTCTGCTGG+AGG 0.660836 3_1:+80766709 Msa0379590:CDS
TATTTGTGTAACCAATGCTG+AGG 0.665590 3_1:+80777575 Msa0379590:three_prime_UTR
TTGGTAACTACGTAGAGCAG+CGG 0.681363 3_1:-80777167 None:intergenic
TTACCATATCTTCCAGAGGG+AGG 0.686655 3_1:+80777438 Msa0379590:CDS
CCTTCTCCTCAGGATAAGAG+CGG 0.688063 3_1:-80773612 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTAATTGTTTTTG+TGG + chr3_1:80766547-80766566 Msa0379590:intron 10.0%
!! CAATACAAAAATATAAAAAT+AGG - chr3_1:80766769-80766788 None:intergenic 10.0%
!! TTTATTAAATTATAATCTGT+TGG - chr3_1:80767130-80767149 None:intergenic 10.0%
!!! TTTTTTTTTCCTTAAAATTA+AGG + chr3_1:80773836-80773855 Msa0379590:intron 10.0%
!! TATAAACTAAAAAATTACTT+TGG - chr3_1:80775214-80775233 None:intergenic 10.0%
!! ATATTAAATTAAAAATTGTG+AGG + chr3_1:80776218-80776237 Msa0379590:intron 10.0%
!! AGTGAAAATAAAAGTAATTT+GGG + chr3_1:80766816-80766835 Msa0379590:intron 15.0%
!! TATAAACAAAGTATATTCTA+TGG - chr3_1:80771622-80771641 None:intergenic 15.0%
!!! AATATACTTTGTTTATAGAA+GGG + chr3_1:80771625-80771644 Msa0379590:intron 15.0%
!!! GTAACAATTTTACATAATTA+TGG - chr3_1:80772891-80772910 None:intergenic 15.0%
!! AAGTTGTAAATAATTAAAGA+GGG - chr3_1:80772913-80772932 None:intergenic 15.0%
!! AAAGTTGTAAATAATTAAAG+AGG - chr3_1:80772914-80772933 None:intergenic 15.0%
!! AAGAATGTTTATTAATTAAC+CGG + chr3_1:80773358-80773377 Msa0379590:intron 15.0%
!!! TTTATCTTTTTAATTGGAAA+GGG - chr3_1:80773930-80773949 None:intergenic 15.0%
!!! TTTTATCTTTTTAATTGGAA+AGG - chr3_1:80773931-80773950 None:intergenic 15.0%
!!! TAGCATTTTATCTTTTTAAT+TGG - chr3_1:80773936-80773955 None:intergenic 15.0%
!!! AATTAATGCATTTTTATGAA+CGG + chr3_1:80774856-80774875 Msa0379590:intron 15.0%
!!! TTTTTTTTAATGTTAGTGTT+AGG + chr3_1:80775405-80775424 Msa0379590:intron 15.0%
!! TTATTTACTTTCGTATATAA+TGG + chr3_1:80775756-80775775 Msa0379590:intron 15.0%
!!! ACATTTTGAGTTTATTATTT+CGG + chr3_1:80776189-80776208 Msa0379590:intron 15.0%
!! TTTCTATTTAATATCCTATT+TGG - chr3_1:80776967-80776986 None:intergenic 15.0%
!! AAGAAAAGCTAATTAATAAT+TGG - chr3_1:80777075-80777094 None:intergenic 15.0%
!! TTTCTATATATTATTCGTAT+GGG - chr3_1:80777729-80777748 None:intergenic 15.0%
!!! TTCAAGTATTATTTATTTCT+TGG - chr3_1:80777853-80777872 None:intergenic 15.0%
!! AGAAATAAATAATACTTGAA+TGG + chr3_1:80777853-80777872 Msa0379590:three_prime_UTR 15.0%
!!! ATGGATTAAATACATTTTTT+TGG + chr3_1:80777872-80777891 Msa0379590:three_prime_UTR 15.0%
!! AAGACATTGAATTTGAATTT+AGG - chr3_1:80766207-80766226 None:intergenic 20.0%
!! AAAAAAGGATAATTACTCAT+AGG - chr3_1:80766436-80766455 None:intergenic 20.0%
!! ATTGAATTTATACTTAAGTG+AGG + chr3_1:80766791-80766810 Msa0379590:intron 20.0%
!! TTGAATTTATACTTAAGTGA+GGG + chr3_1:80766792-80766811 Msa0379590:intron 20.0%
!! GAGTGAAAATAAAAGTAATT+TGG + chr3_1:80766815-80766834 Msa0379590:intron 20.0%
!! GTGAAAATAAAAGTAATTTG+GGG + chr3_1:80766817-80766836 Msa0379590:intron 20.0%
!! ACTGAAAAACTGAAAATTAT+AGG - chr3_1:80767154-80767173 None:intergenic 20.0%
!!! AATAACATTTGTCTCTATTT+TGG + chr3_1:80767341-80767360 Msa0379590:intron 20.0%
!! ATTACACAATAGAAATGATA+AGG - chr3_1:80767851-80767870 None:intergenic 20.0%
!! GGTAAATTGAAATATTTCTT+GGG - chr3_1:80768726-80768745 None:intergenic 20.0%
!! TGGTAAATTGAAATATTTCT+TGG - chr3_1:80768727-80768746 None:intergenic 20.0%
!! AAATGGTATGAAAAATTAAC+TGG - chr3_1:80768933-80768952 None:intergenic 20.0%
!!! TGAGAAATGAAATTTGAAAT+AGG + chr3_1:80769473-80769492 Msa0379590:intron 20.0%
!! TTATTTGCAGAAGAAATATT+AGG + chr3_1:80769512-80769531 Msa0379590:intron 20.0%
!!! TGATTTTAGTAGATTCTTAT+GGG - chr3_1:80770401-80770420 None:intergenic 20.0%
!!! ATGATTTTAGTAGATTCTTA+TGG - chr3_1:80770402-80770421 None:intergenic 20.0%
!!! TTACTTCATTTTGATATTTG+GGG - chr3_1:80770478-80770497 None:intergenic 20.0%
!!! GTTACTTCATTTTGATATTT+GGG - chr3_1:80770479-80770498 None:intergenic 20.0%
!!! AGTTACTTCATTTTGATATT+TGG - chr3_1:80770480-80770499 None:intergenic 20.0%
!! TTTATTATCAACAGAAATAG+AGG + chr3_1:80770582-80770601 Msa0379590:intron 20.0%
!! TTATTATCAACAGAAATAGA+GGG + chr3_1:80770583-80770602 Msa0379590:intron 20.0%
!!! GAATATACTTTGTTTATAGA+AGG + chr3_1:80771624-80771643 Msa0379590:intron 20.0%
!! TTTCTACTACATTCTTAATA+TGG - chr3_1:80767647-80767666 None:intergenic 20.0%
!! ATATTAAGAATGTAGTAGAA+AGG + chr3_1:80772574-80772593 Msa0379590:intron 20.0%
!! ATTACACAATAGAAATGATA+AGG - chr3_1:80767851-80767870 None:intergenic 20.0%
!! TACATGCGAATTAATATAAT+GGG + chr3_1:80772827-80772846 Msa0379590:intron 20.0%
!! AAAGATAAAAGGAGAATATT+AGG - chr3_1:80773050-80773069 None:intergenic 20.0%
!! TTATAAATATGCCAATGAAA+TGG - chr3_1:80773192-80773211 None:intergenic 20.0%
!! TTCATTGGCATATTTATAAT+AGG + chr3_1:80773193-80773212 Msa0379590:intron 20.0%
!!! ATTTTTGTTTACCAGTTTAT+TGG + chr3_1:80773496-80773515 Msa0379590:intron 20.0%
!! CATTAAAATAACCAATAAAC+TGG - chr3_1:80773510-80773529 None:intergenic 20.0%
!!! CAGTTTATTGGTTATTTTAA+TGG + chr3_1:80773508-80773527 Msa0379590:intron 20.0%
!!! TTTTCTATCCCTATATATAA+GGG - chr3_1:80774452-80774471 None:intergenic 20.0%
!!! TTTAGTTAAACTTGTTTGTT+AGG + chr3_1:80774824-80774843 Msa0379590:intron 20.0%
!!! TTAGTTAAACTTGTTTGTTA+GGG + chr3_1:80774825-80774844 Msa0379590:intron 20.0%
!!! AATTTACAATTTTCAAAAGG+TGG - chr3_1:80775180-80775199 None:intergenic 20.0%
!!! CGTAATTTACAATTTTCAAA+AGG - chr3_1:80775183-80775202 None:intergenic 20.0%
!!! GCTTGTAAATTTTTTATGAA+AGG - chr3_1:80775687-80775706 None:intergenic 20.0%
!! ATTTGCTCATAATAACTAAT+TGG - chr3_1:80776509-80776528 None:intergenic 20.0%
!!! TTGTAATTTGTAACACATTA+AGG - chr3_1:80776549-80776568 None:intergenic 20.0%
!!! TGAAACTTTTCACAAAAAAA+TGG - chr3_1:80777026-80777045 None:intergenic 20.0%
!! GTTTCTATATATTATTCGTA+TGG - chr3_1:80777730-80777749 None:intergenic 20.0%
! TGAAGAAGAATTGAATAAGA+AGG - chr3_1:80766137-80766156 None:intergenic 25.0%
! ATAATTACTCATAGGAACAA+GGG - chr3_1:80766428-80766447 None:intergenic 25.0%
! TGAATTTATACTTAAGTGAG+GGG + chr3_1:80766793-80766812 Msa0379590:intron 25.0%
! ACTGATATTCAGTAATATAG+AGG + chr3_1:80767086-80767105 Msa0379590:intron 25.0%
! AATTCAATAAAACTGAACGT+TGG + chr3_1:80767205-80767224 Msa0379590:intron 25.0%
!!! GGTATCTTAAATATTTTGAG+TGG + chr3_1:80767278-80767297 Msa0379590:intron 25.0%
! TTGTTAAGTTCTCAAACAAA+AGG - chr3_1:80767457-80767476 None:intergenic 25.0%
! GTCACATTAGCAAAATAAAA+AGG + chr3_1:80767587-80767606 Msa0379590:intron 25.0%
!!! CATAAAACGACACTTATTTT+GGG - chr3_1:80767614-80767633 None:intergenic 25.0%
!! ACATAAAACGACACTTATTT+TGG - chr3_1:80767615-80767634 None:intergenic 25.0%
! CTATTAAGAATGTAGTAGAA+AGG + chr3_1:80767646-80767665 Msa0379590:intron 25.0%
!!! ATTCATTAACTTGTGAATGA+AGG + chr3_1:80767677-80767696 Msa0379590:intron 25.0%
!! AACATTTTACTTTCCAAGTT+GGG - chr3_1:80767913-80767932 None:intergenic 25.0%
! TTGGAAAGTAAAATGTTGAA+GGG + chr3_1:80767916-80767935 Msa0379590:intron 25.0%
! GCTTTCAAAATTAAAGATCT+TGG - chr3_1:80768747-80768766 None:intergenic 25.0%
! AAGGGATATAATCAAATTGA+AGG - chr3_1:80769194-80769213 None:intergenic 25.0%
! TTCAATTTGATTATATCCCT+TGG + chr3_1:80769193-80769212 Msa0379590:intron 25.0%
! TTCATGAAAAACAACATTTC+TGG + chr3_1:80769835-80769854 Msa0379590:intron 25.0%
!!! ATTCATTCCTTTAAGGTTTT+TGG - chr3_1:80770001-80770020 None:intergenic 25.0%
! AAATTCATTAGGTCAGATAA+TGG - chr3_1:80770292-80770311 None:intergenic 25.0%
! TTATCTGACCTAATGAATTT+AGG + chr3_1:80770292-80770311 Msa0379590:intron 25.0%
! TATCTGACCTAATGAATTTA+GGG + chr3_1:80770293-80770312 Msa0379590:intron 25.0%
! TAAAATCATCAACTATAGTG+AGG + chr3_1:80770413-80770432 Msa0379590:intron 25.0%
! ATAGAGTGACTTGAATTATA+AGG + chr3_1:80770517-80770536 Msa0379590:intron 25.0%
!! ATAAGGCAATTTTCTTTCTT+TGG + chr3_1:80770534-80770553 Msa0379590:intron 25.0%
! AATAGATGAAACAACTACAT+TGG + chr3_1:80770681-80770700 Msa0379590:intron 25.0%
! AAACAGAATTACAAACAGTT+TGG + chr3_1:80770707-80770726 Msa0379590:intron 25.0%
! AACAGAATTACAAACAGTTT+GGG + chr3_1:80770708-80770727 Msa0379590:intron 25.0%
!!! ATCAGATTGACTTTAAAATG+TGG + chr3_1:80770925-80770944 Msa0379590:intron 25.0%
!!! CTTTAAAATGTGGTGAATAA+AGG + chr3_1:80770935-80770954 Msa0379590:intron 25.0%
! ACAATTATAGTAGTACCATT+AGG + chr3_1:80771009-80771028 Msa0379590:intron 25.0%
!!! CATAGGTTTGATTTTATGAA+AGG + chr3_1:80771044-80771063 Msa0379590:intron 25.0%
! TATCTTGAATTGTTCTTAGA+TGG + chr3_1:80771465-80771484 Msa0379590:intron 25.0%
!! AAATAATCAAGGACAGATTT+TGG + chr3_1:80771846-80771865 Msa0379590:intron 25.0%
! GAAATTCAAAGAAAAAGAAG+AGG + chr3_1:80772458-80772477 Msa0379590:intron 25.0%
!!! ATTCATTAACTTGTGAATGA+AGG + chr3_1:80767677-80767696 Msa0379590:intron 25.0%
! CTACATGCGAATTAATATAA+TGG + chr3_1:80772826-80772845 Msa0379590:intron 25.0%
! TTCTTCTTACTACTAACTAT+AGG + chr3_1:80773014-80773033 Msa0379590:intron 25.0%
! TTAATTAACCGGAATTGTTA+TGG + chr3_1:80773369-80773388 Msa0379590:intron 25.0%
!!! TATTGCAGACTTTTTTAGTT+TGG + chr3_1:80773576-80773595 Msa0379590:intron 25.0%
! TACTCAATTAACCAAATTGT+TGG + chr3_1:80773635-80773654 Msa0379590:CDS 25.0%
! ACTCAATTAACCAAATTGTT+GGG + chr3_1:80773636-80773655 Msa0379590:CDS 25.0%
!!! GGTAGTTTAACTTTTTTATC+TGG + chr3_1:80773699-80773718 Msa0379590:intron 25.0%
!! TGAATTGCTTACTTTCTTTT+GGG + chr3_1:80773803-80773822 Msa0379590:intron 25.0%
! GATTTCAAATCAAACCAAAA+CGG + chr3_1:80774072-80774091 Msa0379590:intron 25.0%
! AATGTTTAACCGCAATAAAA+AGG + chr3_1:80774237-80774256 Msa0379590:intron 25.0%
!! CTTTTATGACTTCTGTTTAA+CGG - chr3_1:80774352-80774371 None:intergenic 25.0%
! TCAAGAAACCCTTATATATA+GGG + chr3_1:80774441-80774460 Msa0379590:intron 25.0%
!! GTTTTCTATCCCTATATATA+AGG - chr3_1:80774453-80774472 None:intergenic 25.0%
!! AGGATAGTTTTCATATTACT+TGG - chr3_1:80774525-80774544 None:intergenic 25.0%
!!! TTCTAATTTTGGAGTATCTT+AGG - chr3_1:80774557-80774576 None:intergenic 25.0%
!!! CTAGGATTAGTTTCTAATTT+TGG - chr3_1:80774568-80774587 None:intergenic 25.0%
! CACAATGTATAAAAATGTCT+CGG - chr3_1:80774627-80774646 None:intergenic 25.0%
! TAGGAAACAAATTATCAGAT+AGG - chr3_1:80774671-80774690 None:intergenic 25.0%
!! TGCTTTCTTTTACTCTTTTT+TGG + chr3_1:80774921-80774940 Msa0379590:intron 25.0%
!!! TTTCTTTTACTCTTTTTTGG+TGG + chr3_1:80774924-80774943 Msa0379590:intron 25.0%
!! ATATTTGTGGTCAATTCTTT+TGG + chr3_1:80775061-80775080 Msa0379590:CDS 25.0%
! TCTTGTGAGTTCAAATAATA+TGG + chr3_1:80775267-80775286 Msa0379590:intron 25.0%
!!! TTAGCATTTGCTATTTGTAA+CGG - chr3_1:80775343-80775362 None:intergenic 25.0%
!!! TATTTTAGGTCAGGTATATA+TGG - chr3_1:80775447-80775466 None:intergenic 25.0%
!! TGACTGGATACATATATTTT+AGG - chr3_1:80775461-80775480 None:intergenic 25.0%
! ACGTGATATAAAATATTGAC+TGG - chr3_1:80775477-80775496 None:intergenic 25.0%
! ATGCATATTTAGCTAATATG+TGG - chr3_1:80775502-80775521 None:intergenic 25.0%
! TAAATTTATAGGGTTTGGAT+GGG - chr3_1:80775536-80775555 None:intergenic 25.0%
! TTACCTAAATTTATAGGGTT+TGG - chr3_1:80775541-80775560 None:intergenic 25.0%
! CTCAGTTACCTAAATTTATA+GGG - chr3_1:80775546-80775565 None:intergenic 25.0%
!!! CTGAATTTACTATTGACTTA+TGG + chr3_1:80775636-80775655 Msa0379590:intron 25.0%
! AGTAAATAATTGCAACTTGA+TGG - chr3_1:80775745-80775764 None:intergenic 25.0%
! CATTAGATGAATACACATAA+AGG - chr3_1:80775798-80775817 None:intergenic 25.0%
! ATTCATCTAATGTCTAATTC+TGG + chr3_1:80775806-80775825 Msa0379590:intron 25.0%
! TTCATCTAATGTCTAATTCT+GGG + chr3_1:80775807-80775826 Msa0379590:intron 25.0%
!!! TCAAGATCAATTCTTTGTTT+TGG - chr3_1:80775891-80775910 None:intergenic 25.0%
!!! TTTTTTCTCTCTCTTTGTAA+TGG + chr3_1:80775965-80775984 Msa0379590:intron 25.0%
! TAATTGAATACAACTCATGT+GGG + chr3_1:80776088-80776107 Msa0379590:intron 25.0%
! AATAAACTCAAAATGTCAAG+AGG - chr3_1:80776185-80776204 None:intergenic 25.0%
! AAAATTGTGAGGCATATTTA+TGG + chr3_1:80776229-80776248 Msa0379590:intron 25.0%
! GTAAGAGCAAAAGAATTAAA+AGG - chr3_1:80776473-80776492 None:intergenic 25.0%
! TTTCACAAAAAAATGGAGAA+AGG - chr3_1:80777019-80777038 None:intergenic 25.0%
! ACAGGTTCAAAATTATTATG+GGG - chr3_1:80777098-80777117 None:intergenic 25.0%
! GACAGGTTCAAAATTATTAT+GGG - chr3_1:80777099-80777118 None:intergenic 25.0%
! TGACAGGTTCAAAATTATTA+TGG - chr3_1:80777100-80777119 None:intergenic 25.0%
! GAAAGAACATAAACAGAAAT+TGG - chr3_1:80777411-80777430 None:intergenic 25.0%
!! AAACATTTTCAATGATCTGA+TGG - chr3_1:80777664-80777683 None:intergenic 25.0%
! CCTTAAGAAACAAACAAATT+AGG - chr3_1:80777802-80777821 None:intergenic 25.0%
!!! CCTAATTTGTTTGTTTCTTA+AGG + chr3_1:80777799-80777818 Msa0379590:three_prime_UTR 25.0%
! GTAACTACAAAATACTTGAA+TGG + chr3_1:80777821-80777840 Msa0379590:three_prime_UTR 25.0%
! AAATGGAAGGGTGATTTTAT+TGG - chr3_1:80766247-80766266 None:intergenic 30.0%
!!! AACAGTTTTTTTAGTTGCAG+TGG - chr3_1:80766344-80766363 None:intergenic 30.0%
ATTAGCAACAGCTAAAGAAA+CGG - chr3_1:80766386-80766405 None:intergenic 30.0%
GATAATTACTCATAGGAACA+AGG - chr3_1:80766429-80766448 None:intergenic 30.0%
! TCGCTCAGTTAAATACTTTT+GGG + chr3_1:80766458-80766477 Msa0379590:CDS 30.0%
!! TCAGTTAAATACTTTTGGGT+GGG + chr3_1:80766462-80766481 Msa0379590:intron 30.0%
! GCATTTTGTATATACGATAC+CGG + chr3_1:80766605-80766624 Msa0379590:CDS 30.0%
CATTTGTAACAATTCCTAAC+CGG - chr3_1:80766627-80766646 None:intergenic 30.0%
ATAACAAAAAACCGCCATTT+GGG - chr3_1:80766664-80766683 None:intergenic 30.0%
!!! AAATGGCGGTTTTTTGTTAT+CGG + chr3_1:80766664-80766683 Msa0379590:CDS 30.0%
!!! GTTTTTTGTTATCGGGTTTT+TGG + chr3_1:80766672-80766691 Msa0379590:CDS 30.0%
ATAAGTGGTGTAAGATTGTA+CGG + chr3_1:80766890-80766909 Msa0379590:intron 30.0%
ATGATATGTCTGTAAGTTGT+TGG + chr3_1:80766934-80766953 Msa0379590:intron 30.0%
ATGAAATCACCATAAGTTGT+TGG + chr3_1:80766983-80767002 Msa0379590:intron 30.0%
TAAGATACCTGATTCAGTAT+GGG - chr3_1:80767267-80767286 None:intergenic 30.0%
TTAAGATACCTGATTCAGTA+TGG - chr3_1:80767268-80767287 None:intergenic 30.0%
TAAGTTCTCAAACAAAAGGT+AGG - chr3_1:80767453-80767472 None:intergenic 30.0%
GAACTTAACAAGAAATGATG+TGG + chr3_1:80767466-80767485 Msa0379590:intron 30.0%
AACTAAACTAAACCCAATCA+AGG - chr3_1:80767492-80767511 None:intergenic 30.0%
! CTTTGTAGATCTGATAGTTT+TGG + chr3_1:80767533-80767552 Msa0379590:intron 30.0%
! CAACATTTTACTTTCCAAGT+TGG - chr3_1:80767914-80767933 None:intergenic 30.0%
CTTGGAAAGTAAAATGTTGA+AGG + chr3_1:80767915-80767934 Msa0379590:intron 30.0%
TGATTGTCACAATACAATAC+AGG + chr3_1:80768108-80768127 Msa0379590:intron 30.0%
! TCAGGACAATGTTTCTTTTT+GGG - chr3_1:80768285-80768304 None:intergenic 30.0%
ATAGTGACATTTCTGCTTAT+AGG - chr3_1:80768551-80768570 None:intergenic 30.0%
GTGTCAAAGAAAATATTGTC+TGG - chr3_1:80768667-80768686 None:intergenic 30.0%
GAAGTTGTTCATTCTCAAAA+TGG - chr3_1:80768699-80768718 None:intergenic 30.0%
GCTTCTTTATTCACTAAGAA+GGG - chr3_1:80768870-80768889 None:intergenic 30.0%
TGCTTCTTTATTCACTAAGA+AGG - chr3_1:80768871-80768890 None:intergenic 30.0%
! TTTTTCATACCATTTCCTAC+TGG + chr3_1:80768938-80768957 Msa0379590:intron 30.0%
GAAAGCTTACAAACTTGATT+AGG + chr3_1:80768987-80769006 Msa0379590:intron 30.0%
ATATTTGATTGCCTCAGAAT+AGG + chr3_1:80769385-80769404 Msa0379590:intron 30.0%
AACAAGAGACATAGCAAATA+TGG + chr3_1:80769427-80769446 Msa0379590:intron 30.0%
AGACATAGCAAATATGGAAT+GGG + chr3_1:80769433-80769452 Msa0379590:intron 30.0%
ATCAGGAAAATATTGCCAAT+TGG + chr3_1:80769772-80769791 Msa0379590:intron 30.0%
AAGACAACCAAAAACCTTAA+AGG + chr3_1:80769991-80770010 Msa0379590:intron 30.0%
ACCTTAAAGGAATGAATATC+AGG + chr3_1:80770004-80770023 Msa0379590:intron 30.0%
ACCTGATATTCATTCCTTTA+AGG - chr3_1:80770008-80770027 None:intergenic 30.0%
AGCATAACTCCAGAAAATAT+TGG + chr3_1:80770114-80770133 Msa0379590:intron 30.0%
GCATAACTCCAGAAAATATT+GGG + chr3_1:80770115-80770134 Msa0379590:intron 30.0%
ATCTGACCTAATGAATTTAG+GGG + chr3_1:80770294-80770313 Msa0379590:intron 30.0%
ATATCACCCCTAAATTCATT+AGG - chr3_1:80770303-80770322 None:intergenic 30.0%
TAATGAATTTAGGGGTGATA+TGG + chr3_1:80770302-80770321 Msa0379590:intron 30.0%
TCCTGTATAACACATTTATC+AGG + chr3_1:80770853-80770872 Msa0379590:intron 30.0%
! AGGCAAGAAATTAACTTGAT+AGG + chr3_1:80770873-80770892 Msa0379590:intron 30.0%
ACTATAATTGTTCACTATGC+TGG - chr3_1:80771000-80771019 None:intergenic 30.0%
!! AACTATTGGCTTATTGATTC+TGG - chr3_1:80771111-80771130 None:intergenic 30.0%
AGAATCAATAAGCCAATAGT+TGG + chr3_1:80771110-80771129 Msa0379590:intron 30.0%
TACATGTTCAATCCAACTAT+TGG - chr3_1:80771125-80771144 None:intergenic 30.0%
! ATAACTGATTCTCAATCAGT+TGG - chr3_1:80771333-80771352 None:intergenic 30.0%
AGCATGAGGTTTATTGTTAT+TGG + chr3_1:80771380-80771399 Msa0379590:intron 30.0%
! GCATGAGGTTTATTGTTATT+GGG + chr3_1:80771381-80771400 Msa0379590:intron 30.0%
! GATTTTTGTTACATGAAGCA+TGG - chr3_1:80771411-80771430 None:intergenic 30.0%
TGTAACAAAAATCCACAGTA+TGG + chr3_1:80771418-80771437 Msa0379590:intron 30.0%
AAGTATCATTTAATCCAGTG+AGG + chr3_1:80771688-80771707 Msa0379590:intron 30.0%
TCATCTCTGTGAAATAATCA+AGG + chr3_1:80771835-80771854 Msa0379590:intron 30.0%
! ACATTCTTGGATTTTGAACT+CGG - chr3_1:80772012-80772031 None:intergenic 30.0%
GTAATCATCTCATACATTCT+TGG - chr3_1:80772025-80772044 None:intergenic 30.0%
CTACGATTCAAATCATCAAA+AGG + chr3_1:80772059-80772078 Msa0379590:intron 30.0%
AAATCATCAAAAGGAGGAAT+AGG + chr3_1:80772068-80772087 Msa0379590:intron 30.0%
GAAATGCAGAAAAAGATGAA+AGG + chr3_1:80772295-80772314 Msa0379590:intron 30.0%
ACGTGATTAAAGAGAAAAGA+AGG + chr3_1:80772373-80772392 Msa0379590:intron 30.0%
!!! CAATTTAGGTTTTTTCACAC+AGG - chr3_1:80772943-80772962 None:intergenic 30.0%
CTGTGTGAAAAAACCTAAAT+TGG + chr3_1:80772941-80772960 Msa0379590:intron 30.0%
ACCTAAATTGGCACTTAATA+TGG + chr3_1:80772953-80772972 Msa0379590:intron 30.0%
TCCATATTAAGTGCCAATTT+AGG - chr3_1:80772957-80772976 None:intergenic 30.0%
CAGTACTTTCGAAAGATAAA+AGG - chr3_1:80773061-80773080 None:intergenic 30.0%
TCATCCAACATATTTCTTCA+AGG + chr3_1:80773097-80773116 Msa0379590:intron 30.0%
TCATACGTAATCCATTTCAT+TGG + chr3_1:80773178-80773197 Msa0379590:intron 30.0%
TAATAGGAGAGGCTAATAAT+GGG - chr3_1:80773286-80773305 None:intergenic 30.0%
ATAATAGGAGAGGCTAATAA+TGG - chr3_1:80773287-80773306 None:intergenic 30.0%
CCATTATACCATAACAATTC+CGG - chr3_1:80773380-80773399 None:intergenic 30.0%
AAAGTAAGCAATTCACACAT+AGG - chr3_1:80773798-80773817 None:intergenic 30.0%
! GTGAATTGCTTACTTTCTTT+TGG + chr3_1:80773802-80773821 Msa0379590:intron 30.0%
! CTTGTGTGACCTTAATTTTA+AGG - chr3_1:80773848-80773867 None:intergenic 30.0%
!! ATCTTTTTAATTGGAAAGGG+AGG - chr3_1:80773927-80773946 None:intergenic 30.0%
!! GACATCTTCCAGTTTATTTT+AGG - chr3_1:80774050-80774069 None:intergenic 30.0%
AATCAAACCAAAACGGATAT+TGG + chr3_1:80774079-80774098 Msa0379590:intron 30.0%
! TTTCGAGGTTTTACAAGTTA+GGG - chr3_1:80774128-80774147 None:intergenic 30.0%
! TAGCTTCTTCCTTTTTATTG+CGG - chr3_1:80774249-80774268 None:intergenic 30.0%
GTCAAGAAACCCTTATATAT+AGG + chr3_1:80774440-80774459 Msa0379590:intron 30.0%
!!! TTCCCTGTTTATTTTGGATT+GGG - chr3_1:80774477-80774496 None:intergenic 30.0%
!!! TTTCCCTGTTTATTTTGGAT+TGG - chr3_1:80774478-80774497 None:intergenic 30.0%
! CTTGATTTCCCTGTTTATTT+TGG - chr3_1:80774483-80774502 None:intergenic 30.0%
AGTATCTTAGGTTATCTCTT+AGG - chr3_1:80774545-80774564 None:intergenic 30.0%
! AGTATCTTTGTTTGTCTTCT+AGG - chr3_1:80774586-80774605 None:intergenic 30.0%
! CGAGACATTTTTATACATTG+TGG + chr3_1:80774625-80774644 Msa0379590:intron 30.0%
TTTGTTTCCTATAATTGCAG+TGG + chr3_1:80774680-80774699 Msa0379590:intron 30.0%
!!! TTTTACTCTTTTTTGGTGGA+AGG + chr3_1:80774928-80774947 Msa0379590:intron 30.0%
!!! TTTACTCTTTTTTGGTGGAA+GGG + chr3_1:80774929-80774948 Msa0379590:intron 30.0%
! TTCCATTGGCATATTTTTCA+TGG + chr3_1:80774987-80775006 Msa0379590:intron 30.0%
! TCCATTGGCATATTTTTCAT+GGG + chr3_1:80774988-80775007 Msa0379590:intron 30.0%
AAAGTCGTTGGATATATTTG+TGG + chr3_1:80775048-80775067 Msa0379590:CDS 30.0%
GTAATAACGTGAATTGCAAA+TGG + chr3_1:80775109-80775128 Msa0379590:intron 30.0%
TTTGAACTCACAAGATAAAG+CGG - chr3_1:80775262-80775281 None:intergenic 30.0%
! GGATTTTGAGCTTATCTAAA+AGG - chr3_1:80775304-80775323 None:intergenic 30.0%
!! TAGCATTTGCTATTTGTAAC+GGG - chr3_1:80775342-80775361 None:intergenic 30.0%
AAATAGCAAATGCTAACTGT+TGG + chr3_1:80775347-80775366 Msa0379590:intron 30.0%
!! GGATACATATATTTTAGGTC+AGG - chr3_1:80775456-80775475 None:intergenic 30.0%
CTAAATTTATAGGGTTTGGA+TGG - chr3_1:80775537-80775556 None:intergenic 30.0%
CATCCAAACCCTATAAATTT+AGG + chr3_1:80775535-80775554 Msa0379590:intron 30.0%
GCTCAGTTACCTAAATTTAT+AGG - chr3_1:80775547-80775566 None:intergenic 30.0%
! AAATTTTCTCTGTATCCCAA+GGG + chr3_1:80775585-80775604 Msa0379590:intron 30.0%
! CGTATATAATGGAATAGACT+TGG + chr3_1:80775767-80775786 Msa0379590:intron 30.0%
GTCAGGAAAATAGAAGAAAA+AGG - chr3_1:80775848-80775867 None:intergenic 30.0%
! TCTTCTATTTTCCTGACATT+AGG + chr3_1:80775851-80775870 Msa0379590:intron 30.0%
AGTAGACTACTTTCACTTAT+GGG + chr3_1:80776020-80776039 Msa0379590:intron 30.0%
GTAATTGAATACAACTCATG+TGG + chr3_1:80776087-80776106 Msa0379590:intron 30.0%
TATGAAGGTAGTTGAACAAA+TGG - chr3_1:80776329-80776348 None:intergenic 30.0%
CTACCTTCATATCTTAAAAG+TGG + chr3_1:80776338-80776357 Msa0379590:CDS 30.0%
AAATGTAGACAATAACAGGA+AGG - chr3_1:80776450-80776469 None:intergenic 30.0%
AAGGAAATGTAGACAATAAC+AGG - chr3_1:80776454-80776473 None:intergenic 30.0%
ACAATCCAATTGCAAGATAT+TGG + chr3_1:80776565-80776584 Msa0379590:intron 30.0%
!! TGATCATATACTTTTGCTGT+GGG - chr3_1:80776599-80776618 None:intergenic 30.0%
! ATGATCATATACTTTTGCTG+TGG - chr3_1:80776600-80776619 None:intergenic 30.0%
! ACAGCAAAAGTATATGATCA+TGG + chr3_1:80776599-80776618 Msa0379590:intron 30.0%
TTAGTAGTGTGATTCTCATA+AGG + chr3_1:80776646-80776665 Msa0379590:intron 30.0%
TAGTAGTGTGATTCTCATAA+GGG + chr3_1:80776647-80776666 Msa0379590:intron 30.0%
AGGGCTTATATCAATTAGTA+TGG + chr3_1:80776666-80776685 Msa0379590:intron 30.0%
GGGCTTATATCAATTAGTAT+GGG + chr3_1:80776667-80776686 Msa0379590:intron 30.0%
! TATACCTTATCTGAAGTACT+AGG + chr3_1:80776880-80776899 Msa0379590:intron 30.0%
!! TGGAAATGAATGTTTTTGAC+AGG - chr3_1:80777116-80777135 None:intergenic 30.0%
!! ACTTTTTAGTACGTTAAGCA+GGG - chr3_1:80777210-80777229 None:intergenic 30.0%
!! AACTTTTTAGTACGTTAAGC+AGG - chr3_1:80777211-80777230 None:intergenic 30.0%
GGAGAAAAAATATTTCTCCA+TGG - chr3_1:80777633-80777652 None:intergenic 30.0%
TAGAAACAGACGAATGTTAT+TGG + chr3_1:80777743-80777762 Msa0379590:three_prime_UTR 30.0%
AATAAATAGCTGCTGTGTTT+CGG - chr3_1:80777769-80777788 None:intergenic 30.0%
TTGGAAGAAGGTAAATGGAA+GGG - chr3_1:80766259-80766278 None:intergenic 35.0%
ATTGGAAGAAGGTAAATGGA+AGG - chr3_1:80766260-80766279 None:intergenic 35.0%
TGAGATTGGAAGAAGGTAAA+TGG - chr3_1:80766264-80766283 None:intergenic 35.0%
! AACTGTTCGATGTTTGAGAT+TGG - chr3_1:80766278-80766297 None:intergenic 35.0%
AAGAGGAAGAAGATGAAGAT+TGG - chr3_1:80766309-80766328 None:intergenic 35.0%
TTTAACTGAGCGAGGAAAAA+AGG - chr3_1:80766451-80766470 None:intergenic 35.0%
!! CAAAAGTATTTAACTGAGCG+AGG - chr3_1:80766459-80766478 None:intergenic 35.0%
! CTCGCTCAGTTAAATACTTT+TGG + chr3_1:80766457-80766476 Msa0379590:CDS 35.0%
! CTCAGTTAAATACTTTTGGG+TGG + chr3_1:80766461-80766480 Msa0379590:intron 35.0%
!!! ATTGTTTTTGTGGTGTGATG+TGG + chr3_1:80766557-80766576 Msa0379590:intron 35.0%
! TTGTATATACGATACCGGTT+AGG + chr3_1:80766610-80766629 Msa0379590:CDS 35.0%
GATAACAAAAAACCGCCATT+TGG - chr3_1:80766665-80766684 None:intergenic 35.0%
!!! AATGGCGGTTTTTTGTTATC+GGG + chr3_1:80766665-80766684 Msa0379590:CDS 35.0%
CACTTATGTCAGTAGATACA+AGG - chr3_1:80766877-80766896 None:intergenic 35.0%
CTTGTATCTACTGACATAAG+TGG + chr3_1:80766875-80766894 Msa0379590:intron 35.0%
TAAGTGGTGTAAGATTGTAC+GGG + chr3_1:80766891-80766910 Msa0379590:intron 35.0%
ATCATCTCACCAACAACTTA+TGG - chr3_1:80766995-80767014 None:intergenic 35.0%
TTGGTGAGATGATAGAATGT+AGG + chr3_1:80767002-80767021 Msa0379590:intron 35.0%
GAGATGATAGAATGTAGGAT+TGG + chr3_1:80767007-80767026 Msa0379590:intron 35.0%
! TTCTAGTCAGTTAGCTTAGT+TGG + chr3_1:80767055-80767074 Msa0379590:intron 35.0%
TGTCATATGACAAGACAACA+AGG - chr3_1:80767305-80767324 None:intergenic 35.0%
GTTAATGATATCTGACCTGA+TGG + chr3_1:80767509-80767528 Msa0379590:intron 35.0%
TTGTCACAATACAATACAGG+AGG + chr3_1:80768111-80768130 Msa0379590:intron 35.0%
AGAAACAACCTACTGTATCT+AGG - chr3_1:80768236-80768255 None:intergenic 35.0%
TGGGTCAATCTCTTATATCT+TGG - chr3_1:80768266-80768285 None:intergenic 35.0%
! CTCAGGACAATGTTTCTTTT+TGG - chr3_1:80768286-80768305 None:intergenic 35.0%
AAAGAAACATTGTCCTGAGA+TGG + chr3_1:80768287-80768306 Msa0379590:intron 35.0%
AGGGTTCTTAGATACCTTAA+AGG - chr3_1:80768411-80768430 None:intergenic 35.0%
CATTTCTGCTTATAGGAGAT+TGG - chr3_1:80768544-80768563 None:intergenic 35.0%
GCAGAAATGTCACTATAAAG+AGG + chr3_1:80768555-80768574 Msa0379590:intron 35.0%
AATGTCACTATAAAGAGGAG+AGG + chr3_1:80768560-80768579 Msa0379590:intron 35.0%
GGTATCATTATGTAGCTTGA+TGG + chr3_1:80768581-80768600 Msa0379590:intron 35.0%
TCATTATGTAGCTTGATGGA+AGG + chr3_1:80768585-80768604 Msa0379590:intron 35.0%
! TTAACTGACTCAGGTTTACT+TGG - chr3_1:80768639-80768658 None:intergenic 35.0%
TGATAAAACTGATCTCAGCA+AGG + chr3_1:80768784-80768803 Msa0379590:intron 35.0%
GATAAAACTGATCTCAGCAA+GGG + chr3_1:80768785-80768804 Msa0379590:intron 35.0%
AAGCTTTCTAAATCCCTCTA+TGG - chr3_1:80768975-80768994 None:intergenic 35.0%
! GTCAACAATGCTTTTCTTCA+TGG - chr3_1:80769068-80769087 None:intergenic 35.0%
! AAGCATTGTTGACATCAAGT+TGG + chr3_1:80769075-80769094 Msa0379590:intron 35.0%
! TGTGAGATTGGTTATAGCTT+TGG - chr3_1:80769126-80769145 None:intergenic 35.0%
!!! TACTTTTTCACCTGTTGCAA+AGG - chr3_1:80769156-80769175 None:intergenic 35.0%
CTTCATCAGTCAAACCTATA+GGG - chr3_1:80769289-80769308 None:intergenic 35.0%
! AGGAAGATCCACAATTTTAC+AGG + chr3_1:80769307-80769326 Msa0379590:intron 35.0%
AACTGGAACCTGTAAAATTG+TGG - chr3_1:80769318-80769337 None:intergenic 35.0%
CTTAATGCTCTTGATCAAAC+TGG - chr3_1:80769335-80769354 None:intergenic 35.0%
AGGCAATCAAATATGACTGT+TGG - chr3_1:80769379-80769398 None:intergenic 35.0%
! ATTGCCTCAGAATAGGATTT+TGG + chr3_1:80769392-80769411 Msa0379590:intron 35.0%
TGAACCAAAATCCTATTCTG+AGG - chr3_1:80769399-80769418 None:intergenic 35.0%
GAGACATAGCAAATATGGAA+TGG + chr3_1:80769432-80769451 Msa0379590:intron 35.0%
AGATAATCATGCAAGTATGC+AGG + chr3_1:80769545-80769564 Msa0379590:intron 35.0%
!! AGGAGTAGTCTTATTTCTAG+TGG + chr3_1:80769565-80769584 Msa0379590:intron 35.0%
AGAAGATTCAGATGAAGTTG+AGG + chr3_1:80769643-80769662 Msa0379590:intron 35.0%
GAAGGTGAAGTATGAATAAC+AGG + chr3_1:80769671-80769690 Msa0379590:intron 35.0%
GAAGTATGAATAACAGGAGT+TGG + chr3_1:80769677-80769696 Msa0379590:intron 35.0%
GATAGGGAAGAAGGATTTAA+AGG + chr3_1:80769710-80769729 Msa0379590:intron 35.0%
GGAAGAAGGATTTAAAGGAA+TGG + chr3_1:80769715-80769734 Msa0379590:intron 35.0%
TCAAATATTGATGCAGAAGC+TGG + chr3_1:80769746-80769765 Msa0379590:intron 35.0%
CAAATATTGATGCAGAAGCT+GGG + chr3_1:80769747-80769766 Msa0379590:intron 35.0%
AAATATTGATGCAGAAGCTG+GGG + chr3_1:80769748-80769767 Msa0379590:intron 35.0%
AGGAAAATATTGCCAATTGG+TGG + chr3_1:80769775-80769794 Msa0379590:intron 35.0%
!! CAAAGATTTCTCTGGAATCT+AGG + chr3_1:80769861-80769880 Msa0379590:intron 35.0%
!! GGATACAAGTCAGGTTTTAA+AGG - chr3_1:80769902-80769921 None:intergenic 35.0%
! GTTTTCTTAGGATACAAGTC+AGG - chr3_1:80769911-80769930 None:intergenic 35.0%
!! GCTAGAAAGTGTGTTTTCTT+AGG - chr3_1:80769923-80769942 None:intergenic 35.0%
!! AAAACACACTTTCTAGCTCT+AGG + chr3_1:80769926-80769945 Msa0379590:intron 35.0%
TATCAGGTAAAGAGTCATGT+AGG + chr3_1:80770020-80770039 Msa0379590:intron 35.0%
TCAATATAGGTCACCTTATC+AGG - chr3_1:80770047-80770066 None:intergenic 35.0%
GATAAGGTGACCTATATTGA+AGG + chr3_1:80770047-80770066 Msa0379590:intron 35.0%
! CCAAACTTCCCAATATTTTC+TGG - chr3_1:80770126-80770145 None:intergenic 35.0%
CCAGAAAATATTGGGAAGTT+TGG + chr3_1:80770123-80770142 Msa0379590:intron 35.0%
!! AACAAAACTCTAGAGTTGAG+AGG - chr3_1:80770195-80770214 None:intergenic 35.0%
!!! TCAACTCTAGAGTTTTGTTC+AGG + chr3_1:80770196-80770215 Msa0379590:intron 35.0%
TCTTTGGTGAATAATGCCTT+TGG + chr3_1:80770234-80770253 Msa0379590:intron 35.0%
! TCTGACTTTTATGCTTCCAA+AGG - chr3_1:80770253-80770272 None:intergenic 35.0%
AAGTCAGACAAGAGAAATTC+AGG + chr3_1:80770265-80770284 Msa0379590:intron 35.0%
! GAAGTATTTGTGTCCATGAA+TGG + chr3_1:80770435-80770454 Msa0379590:intron 35.0%
CTATTCCTTCTAATGCAATC+TGG - chr3_1:80770666-80770685 None:intergenic 35.0%
CTTGTAGAAGAAGAAACAGA+TGG + chr3_1:80770748-80770767 Msa0379590:intron 35.0%
AACAGATGGCTCTTTATTAC+AGG + chr3_1:80770762-80770781 Msa0379590:intron 35.0%
ATGAAATCTCAGAGGATGAT+TGG - chr3_1:80770832-80770851 None:intergenic 35.0%
GCCTGATAAATGTGTTATAC+AGG - chr3_1:80770857-80770876 None:intergenic 35.0%
ATGCATGTTACTCTTCCTAA+TGG - chr3_1:80771027-80771046 None:intergenic 35.0%
TTAGGAAGAGTAACATGCAT+AGG + chr3_1:80771027-80771046 Msa0379590:intron 35.0%
ATTGCTTCAACAGTCATCTT+TGG - chr3_1:80771247-80771266 None:intergenic 35.0%
TCTAATGCTGTAACTTCTGA+AGG - chr3_1:80771357-80771376 None:intergenic 35.0%
CTTGAATTGTTCTTAGATGG+AGG + chr3_1:80771468-80771487 Msa0379590:intron 35.0%
! ACTTTGTTTATAGAAGGGAG+TGG + chr3_1:80771630-80771649 Msa0379590:intron 35.0%
GAAGACTCAAGTTCTTCTTA+TGG - chr3_1:80771658-80771677 None:intergenic 35.0%
AGATTCACATCTACAAGGAA+AGG + chr3_1:80771758-80771777 Msa0379590:intron 35.0%
GATTCACATCTACAAGGAAA+GGG + chr3_1:80771759-80771778 Msa0379590:intron 35.0%
!! ACCTTGCTTCAAGTTGTTAA+TGG + chr3_1:80771869-80771888 Msa0379590:intron 35.0%
AAGCTCAATCCAAACATCAA+TGG + chr3_1:80771944-80771963 Msa0379590:intron 35.0%
ATGAATACGCCATTGATGTT+TGG - chr3_1:80771956-80771975 None:intergenic 35.0%
GGCGTATTCATGAAATACAA+TGG + chr3_1:80771965-80771984 Msa0379590:intron 35.0%
TGATTTGAATCGTAGTGCAT+GGG - chr3_1:80772054-80772073 None:intergenic 35.0%
ATGATTTGAATCGTAGTGCA+TGG - chr3_1:80772055-80772074 None:intergenic 35.0%
CGATTCAAATCATCAAAAGG+AGG + chr3_1:80772062-80772081 Msa0379590:intron 35.0%
ATCAAAAGGAGGAATAGGAA+TGG + chr3_1:80772073-80772092 Msa0379590:intron 35.0%
TAGTTAGAACAGTTGAGAAG+AGG + chr3_1:80772164-80772183 Msa0379590:intron 35.0%
!! TCAGCTTGTTGAACAACAAT+CGG + chr3_1:80772245-80772264 Msa0379590:intron 35.0%
CTGTCCTTGAAGAAATATGT+TGG - chr3_1:80773104-80773123 None:intergenic 35.0%
GAGTCAACATGTGAACAAAA+TGG - chr3_1:80773133-80773152 None:intergenic 35.0%
TGTAGCATCACTCAAAGTAT+AGG + chr3_1:80773225-80773244 Msa0379590:intron 35.0%
!!! CCTCTCCTATTATTTTGAAC+CGG + chr3_1:80773294-80773313 Msa0379590:intron 35.0%
CCATTCCGGTTCAAAATAAT+AGG - chr3_1:80773302-80773321 None:intergenic 35.0%
!!! CCTATTATTTTGAACCGGAA+TGG + chr3_1:80773299-80773318 Msa0379590:intron 35.0%
!!! ATTATTTTGAACCGGAATGG+AGG + chr3_1:80773302-80773321 Msa0379590:intron 35.0%
GAATATTGCCACAAAATCTG+TGG + chr3_1:80773334-80773353 Msa0379590:intron 35.0%
CCGGAATTGTTATGGTATAA+TGG + chr3_1:80773377-80773396 Msa0379590:intron 35.0%
GTTATGGTATAATGGTGAGA+TGG + chr3_1:80773385-80773404 Msa0379590:intron 35.0%
ACAGGTCTTCTAAATCATGT+GGG + chr3_1:80773419-80773438 Msa0379590:intron 35.0%
GGATCCAACTGAATAAAGAA+TGG - chr3_1:80773447-80773466 None:intergenic 35.0%
AAGTGCTAACAGTTTGGAAA+TGG - chr3_1:80773468-80773487 None:intergenic 35.0%
CTAGTAAACACCCAACAATT+TGG - chr3_1:80773649-80773668 None:intergenic 35.0%
TCAGCACGGGAAATTAAATA+TGG - chr3_1:80773754-80773773 None:intergenic 35.0%
CATAGGTAGTCAAATTGGTT+AGG - chr3_1:80773781-80773800 None:intergenic 35.0%
TCACACATAGGTAGTCAAAT+TGG - chr3_1:80773786-80773805 None:intergenic 35.0%
GATTGATCGGTGAACTTTAA+GGG - chr3_1:80773962-80773981 None:intergenic 35.0%
TGATTGATCGGTGAACTTTA+AGG - chr3_1:80773963-80773982 None:intergenic 35.0%
! GTTTCGAGGTTTTACAAGTT+AGG - chr3_1:80774129-80774148 None:intergenic 35.0%
! ATTGTTTCAGTTTGGTTTCG+AGG - chr3_1:80774143-80774162 None:intergenic 35.0%
GGCTCAATATTGTTTCAGTT+TGG - chr3_1:80774151-80774170 None:intergenic 35.0%
TTGCGGTTAAACATTTCTCA+TGG - chr3_1:80774232-80774251 None:intergenic 35.0%
ACCAAAGATTAACCATCAAG+AGG + chr3_1:80774268-80774287 Msa0379590:intron 35.0%
! TCCTCTTGATGGTTAATCTT+TGG - chr3_1:80774272-80774291 None:intergenic 35.0%
! CTTTTATCTCATCCTCTTGA+TGG - chr3_1:80774283-80774302 None:intergenic 35.0%
! TTTTACCATGTGCCTTTGAT+AGG - chr3_1:80774391-80774410 None:intergenic 35.0%
ACTCCCAATCCAAAATAAAC+AGG + chr3_1:80774471-80774490 Msa0379590:intron 35.0%
CTCCCAATCCAAAATAAACA+GGG + chr3_1:80774472-80774491 Msa0379590:intron 35.0%
TGGCACATGTTAAATGAAGT+GGG + chr3_1:80774645-80774664 Msa0379590:intron 35.0%
ATTAGAGCCACTGCAATTAT+AGG - chr3_1:80774690-80774709 None:intergenic 35.0%
!! TCTCTAAAGTTGATTTCGTG+TGG + chr3_1:80774723-80774742 Msa0379590:CDS 35.0%
CAAGAAACTATCATCAATGC+TGG - chr3_1:80774749-80774768 None:intergenic 35.0%
! AATGCATTTTTATGAACGGC+AGG + chr3_1:80774860-80774879 Msa0379590:intron 35.0%
TGATTCTTCCACTCGATTAA+AGG + chr3_1:80774896-80774915 Msa0379590:CDS 35.0%
AAAGCATACCTTTAATCGAG+TGG - chr3_1:80774907-80774926 None:intergenic 35.0%
!!! TTACTCTTTTTTGGTGGAAG+GGG + chr3_1:80774930-80774949 Msa0379590:intron 35.0%
! TAAGGTCACTTTCTCAAATG+TGG + chr3_1:80774956-80774975 Msa0379590:intron 35.0%
! AAGGTCACTTTCTCAAATGT+GGG + chr3_1:80774957-80774976 Msa0379590:intron 35.0%
!! CAATTTTCAAAAGGTGGACT+CGG - chr3_1:80775174-80775193 None:intergenic 35.0%
AACGGGACAAACAAAAGTAA+TGG - chr3_1:80775325-80775344 None:intergenic 35.0%
! GAAATTTTCTCTGTATCCCA+AGG + chr3_1:80775584-80775603 Msa0379590:intron 35.0%
! AATTTTCTCTGTATCCCAAG+GGG + chr3_1:80775586-80775605 Msa0379590:intron 35.0%
TCAGTAAAATTTCTCCCCTT+GGG - chr3_1:80775603-80775622 None:intergenic 35.0%
ATCAGTAAAATTTCTCCCCT+TGG - chr3_1:80775604-80775623 None:intergenic 35.0%
TTACATTCCCAATGCTAACA+AGG + chr3_1:80775707-80775726 Msa0379590:intron 35.0%
GAAGAAAAAGGCAAGTAAAG+TGG - chr3_1:80775836-80775855 None:intergenic 35.0%
! TTTTCCTGACATTAGGTGTA+TGG + chr3_1:80775858-80775877 Msa0379590:intron 35.0%
TAAGTGAAAGTAGTCTACTC+TGG - chr3_1:80776019-80776038 None:intergenic 35.0%
GAGTAGACTACTTTCACTTA+TGG + chr3_1:80776019-80776038 Msa0379590:intron 35.0%
TGGGTCATAGTAAATCATGT+GGG + chr3_1:80776107-80776126 Msa0379590:intron 35.0%
! TGTGGGTCTCATTTTCTTTT+TGG + chr3_1:80776124-80776143 Msa0379590:intron 35.0%
! TGCCTTTTGATGTGTATTGT+AGG + chr3_1:80776253-80776272 Msa0379590:intron 35.0%
AGCCTACAATACACATCAAA+AGG - chr3_1:80776258-80776277 None:intergenic 35.0%
!! CCTTTCAAGTTCGAGATTAA+AGG - chr3_1:80776302-80776321 None:intergenic 35.0%
CCTTTAATCTCGAACTTGAA+AGG + chr3_1:80776299-80776318 Msa0379590:CDS 35.0%
!!! GCACCACTTTTAAGATATGA+AGG - chr3_1:80776344-80776363 None:intergenic 35.0%
TCATATCTTAAAAGTGGTGC+TGG + chr3_1:80776344-80776363 Msa0379590:CDS 35.0%
CATGTCCAATATCTTGCAAT+TGG - chr3_1:80776573-80776592 None:intergenic 35.0%
CTAAATCTAGCTACTGTTGT+GGG - chr3_1:80776630-80776649 None:intergenic 35.0%
ACTAAATCTAGCTACTGTTG+TGG - chr3_1:80776631-80776650 None:intergenic 35.0%
GAACTGATGCTATTGCATAT+CGG + chr3_1:80776750-80776769 Msa0379590:intron 35.0%
AACTGATGCTATTGCATATC+GGG + chr3_1:80776751-80776770 Msa0379590:intron 35.0%
ACTGATGGTTTATATGTTCC+TGG + chr3_1:80776803-80776822 Msa0379590:intron 35.0%
CTGATGGTTTATATGTTCCT+GGG + chr3_1:80776804-80776823 Msa0379590:intron 35.0%
TCTTCCTAGTACTTCAGATA+AGG - chr3_1:80776887-80776906 None:intergenic 35.0%
TGTACACCCATTCTTATGTT+TGG - chr3_1:80776942-80776961 None:intergenic 35.0%
AATGGGTGTACAATCCAAAT+AGG + chr3_1:80776950-80776969 Msa0379590:intron 35.0%
AACATTCATTTCCATGTCTC+AGG + chr3_1:80777122-80777141 Msa0379590:intron 35.0%
GGATATGTTGAATGCCAAAT+TGG - chr3_1:80777189-80777208 None:intergenic 35.0%
TCTCTCATGTTAATGTTGTC+AGG + chr3_1:80777248-80777267 Msa0379590:CDS 35.0%
!! TTTTAGCTAATGCGTGCTTA+TGG + chr3_1:80777374-80777393 Msa0379590:intron 35.0%
!! TGGAAGATATGGTAATGGAA+GGG - chr3_1:80777433-80777452 None:intergenic 35.0%
GTTGTGCAATTCTTGTATGT+GGG + chr3_1:80777490-80777509 Msa0379590:CDS 35.0%
TATTTGTGTAACCAATGCTG+AGG + chr3_1:80777575-80777594 Msa0379590:three_prime_UTR 35.0%
AATGATCTGATGGCAAAATG+AGG - chr3_1:80777654-80777673 None:intergenic 35.0%
! CGATGTTTGAGATTGGAAGA+AGG - chr3_1:80766271-80766290 None:intergenic 40.0%
TTTAGTTGCAGTGGACCAAT+CGG - chr3_1:80766335-80766354 None:intergenic 40.0%
AGCTAAAGAAACGGTAGTTG+CGG - chr3_1:80766377-80766396 None:intergenic 40.0%
TTTGTGGTGTGATGTGGTTT+AGG + chr3_1:80766563-80766582 Msa0379590:intron 40.0%
AGATGCTTGCAATTCCCAAA+TGG + chr3_1:80766647-80766666 Msa0379590:CDS 40.0%
!! TATCGGGTTTTTGGAAGCTT+TGG + chr3_1:80766681-80766700 Msa0379590:CDS 40.0%
!! ATCGGGTTTTTGGAAGCTTT+GGG + chr3_1:80766682-80766701 Msa0379590:CDS 40.0%
!!! GTTTTTGGAAGCTTTGGGAT+TGG + chr3_1:80766687-80766706 Msa0379590:CDS 40.0%
TGATTCAGTATGGGTATGAC+TGG - chr3_1:80767258-80767277 None:intergenic 40.0%
AGTCATACCCATACTGAATC+AGG + chr3_1:80767257-80767276 Msa0379590:CDS 40.0%
! TGCGAAAGGTATGACAAAAG+AGG - chr3_1:80767413-80767432 None:intergenic 40.0%
! CTTTTGTCATACCTTTCGCA+AGG + chr3_1:80767413-80767432 Msa0379590:intron 40.0%
CTTGAATAAGACCTTGCGAA+AGG - chr3_1:80767427-80767446 None:intergenic 40.0%
! AGAAATGATGTGGCCTTGAT+TGG + chr3_1:80767476-80767495 Msa0379590:intron 40.0%
! GAAATGATGTGGCCTTGATT+GGG + chr3_1:80767477-80767496 Msa0379590:intron 40.0%
TCAGATCTACAAAGACCATC+AGG - chr3_1:80767527-80767546 None:intergenic 40.0%
TCTACCAATCTCCATCTTGT+GGG - chr3_1:80767879-80767898 None:intergenic 40.0%
ATCTACCAATCTCCATCTTG+TGG - chr3_1:80767880-80767899 None:intergenic 40.0%
GATGTCTAACAATCCCAACT+TGG + chr3_1:80767897-80767916 Msa0379590:intron 40.0%
AGTAAAATGTTGAAGGGCTG+TGG + chr3_1:80767922-80767941 Msa0379590:intron 40.0%
CAGCTGATCATGTGTAGTTA+CGG + chr3_1:80767972-80767991 Msa0379590:intron 40.0%
AGCTGATCATGTGTAGTTAC+GGG + chr3_1:80767973-80767992 Msa0379590:intron 40.0%
! CAAGATGTTTTGTGCGTTCA+TGG + chr3_1:80768052-80768071 Msa0379590:intron 40.0%
TTTGTGCGTTCATGGAAAAC+AGG + chr3_1:80768060-80768079 Msa0379590:intron 40.0%
CTGCAACATGTGAACTTCAA+TGG - chr3_1:80768179-80768198 None:intergenic 40.0%
TGTATCTAGGTCTTCTTCAG+AGG - chr3_1:80768223-80768242 None:intergenic 40.0%
GAAGAAGACCTAGATACAGT+AGG + chr3_1:80768225-80768244 Msa0379590:intron 40.0%
AGATACCTTAAAGGTTCTCC+AGG - chr3_1:80768402-80768421 None:intergenic 40.0%
! CCATTACAATGCAGCTTTGA+GGG - chr3_1:80768430-80768449 None:intergenic 40.0%
CCTCAAAGCTGCATTGTAAT+GGG + chr3_1:80768428-80768447 Msa0379590:intron 40.0%
!! GCATTGTAATGGGTTTGTGT+AGG + chr3_1:80768438-80768457 Msa0379590:intron 40.0%
TGAGTGATGAAAGTGATGTC+TGG + chr3_1:80768486-80768505 Msa0379590:intron 40.0%
TCTGCTTATAGGAGATTGGT+GGG - chr3_1:80768540-80768559 None:intergenic 40.0%
TTCTGCTTATAGGAGATTGG+TGG - chr3_1:80768541-80768560 None:intergenic 40.0%
! AGAAGGTGTGTTAACTGGTT+TGG + chr3_1:80768611-80768630 Msa0379590:intron 40.0%
!! CTGGATTTGTTAACTGACTC+AGG - chr3_1:80768648-80768667 None:intergenic 40.0%
!! GTTGATGATATCATCCTTGC+TGG - chr3_1:80768816-80768835 None:intergenic 40.0%
TATCAGCAATGGCTACAAAC+AGG - chr3_1:80768904-80768923 None:intergenic 40.0%
!! ACTGGTCTTCTTATCAGCAA+TGG - chr3_1:80768915-80768934 None:intergenic 40.0%
TCAAACAAGCCAGTAGGAAA+TGG - chr3_1:80768950-80768969 None:intergenic 40.0%
!!! GGTTTTGAAGTAGTAACACC+TGG + chr3_1:80769008-80769027 Msa0379590:intron 40.0%
! TTTGAAGTAGTAACACCTGG+TGG + chr3_1:80769011-80769030 Msa0379590:intron 40.0%
GTATACATGACTATACCACC+AGG - chr3_1:80769029-80769048 None:intergenic 40.0%
GTGCAAAAACCAGTGATTGA+TGG + chr3_1:80769097-80769116 Msa0379590:intron 40.0%
AAAGGTCACAACTGTGAGAT+TGG - chr3_1:80769138-80769157 None:intergenic 40.0%
TGAGAGATACAAAGCACGTT+TGG - chr3_1:80769222-80769241 None:intergenic 40.0%
AAGGTGAAGCATAATGCTGA+TGG - chr3_1:80769251-80769270 None:intergenic 40.0%
AGGGTGCAGATGAGTTTATA+AGG - chr3_1:80769270-80769289 None:intergenic 40.0%
TAAACTCATCTGCACCCTAT+AGG + chr3_1:80769272-80769291 Msa0379590:intron 40.0%
CCTTCATCAGTCAAACCTAT+AGG - chr3_1:80769290-80769309 None:intergenic 40.0%
CCTATAGGTTTGACTGATGA+AGG + chr3_1:80769287-80769306 Msa0379590:intron 40.0%
! TTTCTAGTGGAAACCCTAAG+AGG + chr3_1:80769578-80769597 Msa0379590:intron 40.0%
ACCTATTCCTGTTCCTCTTA+GGG - chr3_1:80769594-80769613 None:intergenic 40.0%
TGTTGAGGAAGGAGAATCAA+TGG + chr3_1:80769619-80769638 Msa0379590:intron 40.0%
GTTGAGGAAGGAGAATCAAT+GGG + chr3_1:80769620-80769639 Msa0379590:intron 40.0%
GATTCAGATGAAGTTGAGGA+TGG + chr3_1:80769647-80769666 Msa0379590:intron 40.0%
!! ATGAATAACAGGAGTTGGTG+AGG + chr3_1:80769682-80769701 Msa0379590:intron 40.0%
!! AGTTGGTGAGGATGAAGATA+GGG + chr3_1:80769694-80769713 Msa0379590:intron 40.0%
GAAGGATTTAAAGGAATGGC+TGG + chr3_1:80769719-80769738 Msa0379590:intron 40.0%
! ATATTGCCAATTGGTGGTAG+AGG + chr3_1:80769781-80769800 Msa0379590:intron 40.0%
GAAGGAGAGGATGAAATGTA+GGG + chr3_1:80769803-80769822 Msa0379590:intron 40.0%
TCTGGAGACAAAGATTTCTC+TGG + chr3_1:80769853-80769872 Msa0379590:intron 40.0%
!! CTCTGGAATCTAGGTCAAAA+AGG + chr3_1:80769870-80769889 Msa0379590:intron 40.0%
AGGTGACCTATATTGAAGGA+TGG + chr3_1:80770051-80770070 Msa0379590:intron 40.0%
GGTGACCTATATTGAAGGAT+GGG + chr3_1:80770052-80770071 Msa0379590:intron 40.0%
GAGTGGAGACTCTATTAATG+AGG + chr3_1:80770074-80770093 Msa0379590:intron 40.0%
GAGTTTCAACACAAGCTCTT+TGG + chr3_1:80770218-80770237 Msa0379590:intron 40.0%
TTGGCTCAAACTTCCATTCA+TGG - chr3_1:80770451-80770470 None:intergenic 40.0%
TGAATGGAAGTTTGAGCCAA+AGG + chr3_1:80770451-80770470 Msa0379590:intron 40.0%
GAATGGAAGTTTGAGCCAAA+GGG + chr3_1:80770452-80770471 Msa0379590:intron 40.0%
!! TTTTGATATTTGGGGCCCTT+TGG - chr3_1:80770470-80770489 None:intergenic 40.0%
GGGATACAATTGATGCATCT+TGG + chr3_1:80770603-80770622 Msa0379590:intron 40.0%
GCAATCTGGCACTTTAGATT+AGG - chr3_1:80770652-80770671 None:intergenic 40.0%
AAGTGCCAGATTGCATTAGA+AGG + chr3_1:80770658-80770677 Msa0379590:intron 40.0%
GGCTCTTTATTACAGGAATC+AGG + chr3_1:80770769-80770788 Msa0379590:intron 40.0%
!! TCTCAGAGGATGATTGGTTT+GGG - chr3_1:80770826-80770845 None:intergenic 40.0%
! ATCTCAGAGGATGATTGGTT+TGG - chr3_1:80770827-80770846 None:intergenic 40.0%
TACAGGACATGAAATCTCAG+AGG - chr3_1:80770840-80770859 None:intergenic 40.0%
ACATCTGCGATGTGAAAATG+AGG + chr3_1:80770958-80770977 Msa0379590:intron 40.0%
GATCACAGTGTTTATACCTG+AGG + chr3_1:80771155-80771174 Msa0379590:intron 40.0%
AGTGTTTATACCTGAGGTGA+AGG + chr3_1:80771161-80771180 Msa0379590:intron 40.0%
CAGGAATGGAAGAAGTAATG+TGG + chr3_1:80771184-80771203 Msa0379590:intron 40.0%
! TAATGTGGTTTGTGCTAGCA+GGG + chr3_1:80771199-80771218 Msa0379590:intron 40.0%
!! GATTCTCAATCAGTTGGTGA+AGG - chr3_1:80771327-80771346 None:intergenic 40.0%
! ACAGCATTAGAAGAAGCATG+AGG + chr3_1:80771366-80771385 Msa0379590:intron 40.0%
TCAATGCTTCAGATGCAAGA+AGG - chr3_1:80771527-80771546 None:intergenic 40.0%
CGCATAGATTCACATCTACA+AGG + chr3_1:80771753-80771772 Msa0379590:intron 40.0%
CACAGAGATGAAATCTCTGT+GGG - chr3_1:80771826-80771845 None:intergenic 40.0%
TCACAGAGATGAAATCTCTG+TGG - chr3_1:80771827-80771846 None:intergenic 40.0%
GCCATTAACAACTTGAAGCA+AGG - chr3_1:80771873-80771892 None:intergenic 40.0%
TGATGTTTGGATTGAGCTTC+AGG - chr3_1:80771943-80771962 None:intergenic 40.0%
! ACAATGGTTTGCGCAATTTG+CGG + chr3_1:80771981-80772000 Msa0379590:intron 40.0%
ACAGTTGAGAAGAGGAGTAA+CGG + chr3_1:80772172-80772191 Msa0379590:intron 40.0%
GGAGTAACGGTAACTGAATT+TGG + chr3_1:80772185-80772204 Msa0379590:intron 40.0%
GCTTAAAGCTCAAGCTTCAA+TGG + chr3_1:80772489-80772508 Msa0379590:intron 40.0%
TAAAGCTCAAGCTTCAATGG+CGG + chr3_1:80772492-80772511 Msa0379590:intron 40.0%
TCGTAACAAACTCTCTCAAG+AGG + chr3_1:80772530-80772549 Msa0379590:intron 40.0%
TTGGCACTTAATATGGAGAG+AGG + chr3_1:80772960-80772979 Msa0379590:intron 40.0%
TGGCACTTAATATGGAGAGA+GGG + chr3_1:80772961-80772980 Msa0379590:intron 40.0%
! CTCTGTTCTGTGTCTCATTT+TGG + chr3_1:80773150-80773169 Msa0379590:intron 40.0%
! TGTTCTGTGTCTCATTTTGG+AGG + chr3_1:80773153-80773172 Msa0379590:intron 40.0%
AGCATCACTCAAAGTATAGG+AGG + chr3_1:80773228-80773247 Msa0379590:intron 40.0%
CCGGTTCAAAATAATAGGAG+AGG - chr3_1:80773297-80773316 None:intergenic 40.0%
! CATTCTTGCCACAGATTTTG+TGG - chr3_1:80773345-80773364 None:intergenic 40.0%
GAGATGGTACTCTAAATCAC+AGG + chr3_1:80773401-80773420 Msa0379590:intron 40.0%
CACAGGTCTTCTAAATCATG+TGG + chr3_1:80773418-80773437 Msa0379590:intron 40.0%
CAGGTCTTCTAAATCATGTG+GGG + chr3_1:80773420-80773439 Msa0379590:intron 40.0%
AGGTCTTCTAAATCATGTGG+GGG + chr3_1:80773421-80773440 Msa0379590:intron 40.0%
!! CAAGAGAAGTGCTAACAGTT+TGG - chr3_1:80773474-80773493 None:intergenic 40.0%
TAATTGAGTACCTTCTCCTC+AGG - chr3_1:80773625-80773644 None:intergenic 40.0%
GTGTTGTGATTGCTATCTCA+AGG + chr3_1:80773678-80773697 Msa0379590:CDS 40.0%
ATTGGTTAGGAATCTCAGCA+CGG - chr3_1:80773768-80773787 None:intergenic 40.0%
AGTGAATGAGCATTTGTGAG+TGG + chr3_1:80773875-80773894 Msa0379590:intron 40.0%
ATGTTGTTCGTGAGAGTCAA+CGG - chr3_1:80773986-80774005 None:intergenic 40.0%
AGCTGAGGCCTAAAATAAAC+TGG + chr3_1:80774039-80774058 Msa0379590:intron 40.0%
! CGTTAGTCCAATATCCGTTT+TGG - chr3_1:80774089-80774108 None:intergenic 40.0%
AACTGAAGCCCCAATTAGAA+AGG + chr3_1:80774191-80774210 Msa0379590:intron 40.0%
ACTGAAGCCCCAATTAGAAA+GGG + chr3_1:80774192-80774211 Msa0379590:intron 40.0%
TTCTCATGGATTTGAAGACG+CGG - chr3_1:80774218-80774237 None:intergenic 40.0%
CAATTTCCTCTTGTCTTTCG+TGG - chr3_1:80774317-80774336 None:intergenic 40.0%
GTGGCACATGTTAAATGAAG+TGG + chr3_1:80774644-80774663 Msa0379590:intron 40.0%
AACCTTGATTATTGAAGCCC+CGG - chr3_1:80774783-80774802 None:intergenic 40.0%
!!! TACTCTTTTTTGGTGGAAGG+GGG + chr3_1:80774931-80774950 Msa0379590:intron 40.0%
! ATGTGGGCTAAAGTTTCCAT+TGG + chr3_1:80774973-80774992 Msa0379590:intron 40.0%
GCCCATGAAAAATATGCCAA+TGG - chr3_1:80774992-80775011 None:intergenic 40.0%
! GTGGTCAATTCTTTTGGATC+CGG + chr3_1:80775067-80775086 Msa0379590:CDS 40.0%
! TTCTTTTGGATCCGGATTTC+AGG + chr3_1:80775075-80775094 Msa0379590:CDS 40.0%
GTGCTTGGATTGTTAGTGTT+AGG + chr3_1:80775371-80775390 Msa0379590:intron 40.0%
TAGTCCATACACCTAATGTC+AGG - chr3_1:80775865-80775884 None:intergenic 40.0%
GTGGGTCATAGTAAATCATG+TGG + chr3_1:80776106-80776125 Msa0379590:intron 40.0%
! GCTGGTTGCTTTCTAAACAT+TGG + chr3_1:80776362-80776381 Msa0379590:CDS 40.0%
TGCTTTCTAAACATTGGAGC+TGG + chr3_1:80776368-80776387 Msa0379590:CDS 40.0%
AACATTGGAGCTGGTAAAAC+AGG + chr3_1:80776377-80776396 Msa0379590:intron 40.0%
ACAATAACAGGAAGGCAAGT+AGG - chr3_1:80776442-80776461 None:intergenic 40.0%
ATACAAAACCTGTAGGGACA+TGG - chr3_1:80776702-80776721 None:intergenic 40.0%
CACCACATACAAAACCTGTA+GGG - chr3_1:80776708-80776727 None:intergenic 40.0%
TCACCACATACAAAACCTGT+AGG - chr3_1:80776709-80776728 None:intergenic 40.0%
ACTGATGCTATTGCATATCG+GGG + chr3_1:80776752-80776771 Msa0379590:intron 40.0%
GCAACGTCTTAAAAAATCCC+AGG - chr3_1:80776824-80776843 None:intergenic 40.0%
GCTGTGTTATGATTCACTCA+AGG + chr3_1:80776842-80776861 Msa0379590:intron 40.0%
AAGCCAGCCAAACATAAGAA+TGG + chr3_1:80776932-80776951 Msa0379590:intron 40.0%
AGCCAGCCAAACATAAGAAT+GGG + chr3_1:80776933-80776952 Msa0379590:intron 40.0%
GCTCTACGTAGTTACCAATT+TGG + chr3_1:80777172-80777191 Msa0379590:CDS 40.0%
!! CTGGAAGATATGGTAATGGA+AGG - chr3_1:80777434-80777453 None:intergenic 40.0%
TCCATTACCATATCTTCCAG+AGG + chr3_1:80777434-80777453 Msa0379590:CDS 40.0%
CCATTACCATATCTTCCAGA+GGG + chr3_1:80777435-80777454 Msa0379590:CDS 40.0%
CACAACCAAGCAGAAAGAAT+GGG - chr3_1:80777476-80777495 None:intergenic 40.0%
GGTTGTGCAATTCTTGTATG+TGG + chr3_1:80777489-80777508 Msa0379590:CDS 40.0%
ACTTCTGAACTATTCCTAGC+AGG - chr3_1:80777540-80777559 None:intergenic 40.0%
! TGGTATTTTCTCCTCAGCAT+TGG - chr3_1:80777589-80777608 None:intergenic 40.0%
CTTCTTCCTCTTCTTCCGAT+TGG + chr3_1:80766317-80766336 Msa0379590:CDS 45.0%
TAAAGAAACGGTAGTTGCGG+AGG - chr3_1:80766374-80766393 None:intergenic 45.0%
TGCTTGCAATTCCCAAATGG+CGG + chr3_1:80766650-80766669 Msa0379590:CDS 45.0%
!! GAAGCTTTGGGATTGGTTTC+TGG + chr3_1:80766694-80766713 Msa0379590:CDS 45.0%
!! TTGGTTTCTGGAATGTCTGC+TGG + chr3_1:80766706-80766725 Msa0379590:CDS 45.0%
AGATTGTACGGGAGAGCTTA+TGG + chr3_1:80766902-80766921 Msa0379590:intron 45.0%
! AGCTTGTAACTTGCACTGCA+AGG + chr3_1:80767801-80767820 Msa0379590:intron 45.0%
TACCAATCTCCATCTTGTGG+GGG - chr3_1:80767877-80767896 None:intergenic 45.0%
CTACCAATCTCCATCTTGTG+GGG - chr3_1:80767878-80767897 None:intergenic 45.0%
GTTGAAGGGCTGTGGAAATA+AGG + chr3_1:80767930-80767949 Msa0379590:intron 45.0%
CGTAACTACACATGATCAGC+TGG - chr3_1:80767974-80767993 None:intergenic 45.0%
! GAAGCTTTTCCCTCACAATG+TGG + chr3_1:80768019-80768038 Msa0379590:intron 45.0%
GATTGACTGCCACATTGTGA+GGG - chr3_1:80768031-80768050 None:intergenic 45.0%
AGATTGACTGCCACATTGTG+AGG - chr3_1:80768032-80768051 None:intergenic 45.0%
GCGTTCATGGAAAACAGGAT+TGG + chr3_1:80768065-80768084 Msa0379590:intron 45.0%
!! AGGATTGGCTGCAATGTGTA+TGG + chr3_1:80768080-80768099 Msa0379590:intron 45.0%
AGAGGCAGAGTATAGAGCAA+TGG - chr3_1:80768205-80768224 None:intergenic 45.0%
TCCTCAGGCTTACACATTCA+GGG - chr3_1:80768357-80768376 None:intergenic 45.0%
CCCTCAAAGCTGCATTGTAA+TGG + chr3_1:80768427-80768446 Msa0379590:intron 45.0%
CCCATTACAATGCAGCTTTG+AGG - chr3_1:80768431-80768450 None:intergenic 45.0%
GATGAAAGTGATGTCTGGTC+TGG + chr3_1:80768491-80768510 Msa0379590:intron 45.0%
AGCTTGATGGAAGGATCAGA+AGG + chr3_1:80768594-80768613 Msa0379590:intron 45.0%
! GGATCAGAAGGTGTGTTAAC+TGG + chr3_1:80768606-80768625 Msa0379590:intron 45.0%
ATGGACTCAAACAAGCCAGT+AGG - chr3_1:80768956-80768975 None:intergenic 45.0%
!! TGGCTTGTTTGAGTCCATAG+AGG + chr3_1:80768958-80768977 Msa0379590:intron 45.0%
! GGCTTGTTTGAGTCCATAGA+GGG + chr3_1:80768959-80768978 Msa0379590:intron 45.0%
CTTTGGCATCCATCAATCAC+TGG - chr3_1:80769109-80769128 None:intergenic 45.0%
ACAGTTGTGACCTTTGCAAC+AGG + chr3_1:80769143-80769162 Msa0379590:intron 45.0%
! AAAGCACGTTTGGTAGCCAA+GGG - chr3_1:80769212-80769231 None:intergenic 45.0%
ACCCTAAGAGGAACAGGAAT+AGG + chr3_1:80769590-80769609 Msa0379590:intron 45.0%
CACCTATTCCTGTTCCTCTT+AGG - chr3_1:80769595-80769614 None:intergenic 45.0%
CTAAGAGGAACAGGAATAGG+TGG + chr3_1:80769593-80769612 Msa0379590:intron 45.0%
GATGAAGTTGAGGATGGTGA+AGG + chr3_1:80769653-80769672 Msa0379590:intron 45.0%
!! GAGTTGGTGAGGATGAAGAT+AGG + chr3_1:80769693-80769712 Msa0379590:intron 45.0%
GAGGATGAAGATAGGGAAGA+AGG + chr3_1:80769701-80769720 Msa0379590:intron 45.0%
GGAAGGAGAGGATGAAATGT+AGG + chr3_1:80769802-80769821 Msa0379590:intron 45.0%
GAGTCATGTAGGACCTGATA+AGG + chr3_1:80770031-80770050 Msa0379590:intron 45.0%
CCACTCCCATCCTTCAATAT+AGG - chr3_1:80770060-80770079 None:intergenic 45.0%
CCTATATTGAAGGATGGGAG+TGG + chr3_1:80770057-80770076 Msa0379590:intron 45.0%
CAGCACATTCTCAATGTTGC+TGG - chr3_1:80770166-80770185 None:intergenic 45.0%
GGCAAAGTGACAAATGTCAC+AGG + chr3_1:80770555-80770574 Msa0379590:intron 45.0%
GGTTTGGGTAGTGTTTGTGA+TGG - chr3_1:80770811-80770830 None:intergenic 45.0%
TTTATACCTGAGGTGAAGGC+AGG + chr3_1:80771165-80771184 Msa0379590:intron 45.0%
! GTAATGTGGTTTGTGCTAGC+AGG + chr3_1:80771198-80771217 Msa0379590:intron 45.0%
!! TTCTCAGACTGGTTTGACTC+AGG - chr3_1:80771292-80771311 None:intergenic 45.0%
CAAACCAGTCTGAGAAACCA+TGG + chr3_1:80771296-80771315 Msa0379590:intron 45.0%
TCTTCCATGGTTTCTCAGAC+TGG - chr3_1:80771303-80771322 None:intergenic 45.0%
!! AGTTGGTGAAGGATCTTCCA+TGG - chr3_1:80771316-80771335 None:intergenic 45.0%
CCACAGAAACAACCATACTG+TGG - chr3_1:80771433-80771452 None:intergenic 45.0%
!! CCACAGTATGGTTGTTTCTG+TGG + chr3_1:80771430-80771449 Msa0379590:intron 45.0%
GCTCGTGGAAAATCATCTTC+TGG - chr3_1:80771498-80771517 None:intergenic 45.0%
CAAGTGATTCAGTTCCTCAC+TGG - chr3_1:80771705-80771724 None:intergenic 45.0%
CAGTGAGGAACTGAATCACT+TGG + chr3_1:80771703-80771722 Msa0379590:intron 45.0%
TGCTAGAGAATTTCGCATGG+AGG - chr3_1:80771730-80771749 None:intergenic 45.0%
TGCTGCTAGAGAATTTCGCA+TGG - chr3_1:80771733-80771752 None:intergenic 45.0%
AGAGATGAAATCTCTGTGGG+AGG - chr3_1:80771823-80771842 None:intergenic 45.0%
GCTTCAGGAACGATTCTCTA+AGG - chr3_1:80771928-80771947 None:intergenic 45.0%
AGGAATGGATCCATCCACAA+AGG + chr3_1:80772088-80772107 Msa0379590:intron 45.0%
AACAAGCTTGCCTTTGTGGA+TGG - chr3_1:80772101-80772120 None:intergenic 45.0%
GAAGAACAAGCTTGCCTTTG+TGG - chr3_1:80772105-80772124 None:intergenic 45.0%
ACTGTTCTAACTACCTCGCA+TGG - chr3_1:80772157-80772176 None:intergenic 45.0%
ACTGAATTTGGTCCTTCGCT+TGG + chr3_1:80772197-80772216 Msa0379590:intron 45.0%
TTCTACGTTCATCCAAGCGA+AGG - chr3_1:80772212-80772231 None:intergenic 45.0%
! AGCTTGTAACTTGCACTGCA+AGG + chr3_1:80767801-80767820 Msa0379590:intron 45.0%
GGCACTTAATATGGAGAGAG+GGG + chr3_1:80772962-80772981 Msa0379590:intron 45.0%
GCACTTAATATGGAGAGAGG+GGG + chr3_1:80772963-80772982 Msa0379590:intron 45.0%
TCTGTCATGTTCCTCCATTC+CGG - chr3_1:80773316-80773335 None:intergenic 45.0%
GGGGCCATTCTTTATTCAGT+TGG + chr3_1:80773440-80773459 Msa0379590:intron 45.0%
! TGTTTTCCGCTCTTATCCTG+AGG + chr3_1:80773606-80773625 Msa0379590:CDS 45.0%
TTGGTTAGGAATCTCAGCAC+GGG - chr3_1:80773767-80773786 None:intergenic 45.0%
GAGAGTCAACGGTGATTGAT+CGG - chr3_1:80773975-80773994 None:intergenic 45.0%
! TGGCGCTAGCTTATTCACTT+TGG - chr3_1:80774014-80774033 None:intergenic 45.0%
! TTTTAGGCCTCAGCTACTGT+TGG - chr3_1:80774034-80774053 None:intergenic 45.0%
ATTGGGGCTTCAGTTGTAGT+TGG - chr3_1:80774186-80774205 None:intergenic 45.0%
CCTCTTGTCTTTCGTGGTTA+AGG - chr3_1:80774311-80774330 None:intergenic 45.0%
CCTTAACCACGAAAGACAAG+AGG + chr3_1:80774308-80774327 Msa0379590:intron 45.0%
ACCATGTGCCTTTGATAGGT+GGG - chr3_1:80774387-80774406 None:intergenic 45.0%
TACCATGTGCCTTTGATAGG+TGG - chr3_1:80774388-80774407 None:intergenic 45.0%
!! AATTGCAGTGGCTCTAATGC+AGG + chr3_1:80774692-80774711 Msa0379590:intron 45.0%
GTTTCTTGTGCCTTTCAAGC+CGG + chr3_1:80774761-80774780 Msa0379590:CDS 45.0%
TTTCTTGTGCCTTTCAAGCC+GGG + chr3_1:80774762-80774781 Msa0379590:CDS 45.0%
! TTTTGGTGGAAGGGGGTTTA+AGG + chr3_1:80774938-80774957 Msa0379590:intron 45.0%
TTGTGTGCAGCAAAAGTCGT+TGG + chr3_1:80775036-80775055 Msa0379590:intron 45.0%
! TTGGATCCGGATTTCAGGTA+TGG + chr3_1:80775080-80775099 Msa0379590:intron 45.0%
AGCAAGCCATACCTGAAATC+CGG - chr3_1:80775089-80775108 None:intergenic 45.0%
! ATGCTAACTGTTGGAGTGCT+TGG + chr3_1:80775356-80775375 Msa0379590:intron 45.0%
AGGGTTTGGATGGGAAAAGA+GGG - chr3_1:80775527-80775546 None:intergenic 45.0%
TAGGGTTTGGATGGGAAAAG+AGG - chr3_1:80775528-80775547 None:intergenic 45.0%
! GATGGTGCCTTGTTAGCATT+GGG - chr3_1:80775717-80775736 None:intergenic 45.0%
! CAATGCTAACAAGGCACCAT+CGG + chr3_1:80775716-80775735 Msa0379590:intron 45.0%
! TGCAACTTGATGGTAACCGA+TGG - chr3_1:80775735-80775754 None:intergenic 45.0%
ATCTAGCTACTGTTGTGGGA+GGG - chr3_1:80776626-80776645 None:intergenic 45.0%
AATCTAGCTACTGTTGTGGG+AGG - chr3_1:80776627-80776646 None:intergenic 45.0%
!! GTCCCTACAGGTTTTGTATG+TGG + chr3_1:80776703-80776722 Msa0379590:intron 45.0%
! TGTCCTGTGGCAGAAGTATA+GGG + chr3_1:80776779-80776798 Msa0379590:intron 45.0%
GCTTCTCATCTGAGGACTAA+GGG - chr3_1:80776916-80776935 None:intergenic 45.0%
CACCCATTCTTATGTTTGGC+TGG - chr3_1:80776938-80776957 None:intergenic 45.0%
! TTCCATGTCTCAGGTTGTGA+TGG + chr3_1:80777131-80777150 Msa0379590:intron 45.0%
! TTGGTAACTACGTAGAGCAG+CGG - chr3_1:80777170-80777189 None:intergenic 45.0%
! CCCTCTGGAAGATATGGTAA+TGG - chr3_1:80777438-80777457 None:intergenic 45.0%
TTACCATATCTTCCAGAGGG+AGG + chr3_1:80777438-80777457 Msa0379590:CDS 45.0%
TTGAGCCCATTCTTTCTGCT+TGG + chr3_1:80777468-80777487 Msa0379590:CDS 45.0%
GCACAACCAAGCAGAAAGAA+TGG - chr3_1:80777477-80777496 None:intergenic 45.0%
TGAACTATTCCTAGCAGGTC+GGG - chr3_1:80777535-80777554 None:intergenic 45.0%
CTGAACTATTCCTAGCAGGT+CGG - chr3_1:80777536-80777555 None:intergenic 45.0%
CTGAGGAGAAAATACCAGCT+TGG + chr3_1:80777592-80777611 Msa0379590:three_prime_UTR 45.0%
GAAAATACCAGCTTGGCAGT+TGG + chr3_1:80777599-80777618 Msa0379590:three_prime_UTR 45.0%
!! TAAATTAAACTTAAAATAAA+GGG - chr3_1:80767381-80767400 None:intergenic 5.0%
!! ATAAATTAAACTTAAAATAA+AGG - chr3_1:80767382-80767401 None:intergenic 5.0%
AGCTACTAGCGTGTGAGCTA+TGG + chr3_1:80766099-80766118 Msa0379590:exon 50.0%
AGTGGACCAATCGGAAGAAG+AGG - chr3_1:80766326-80766345 None:intergenic 50.0%
!! GTTTCTGGAATGTCTGCTGG+AGG + chr3_1:80766709-80766728 Msa0379590:CDS 50.0%
ACGGGAGAGCTTATGGAAAC+TGG + chr3_1:80766909-80766928 Msa0379590:intron 50.0%
!! CCAGGAAGTATTGCTGCAGA+AGG - chr3_1:80767234-80767253 None:intergenic 50.0%
CCTTCTGCAGCAATACTTCC+TGG + chr3_1:80767231-80767250 Msa0379590:intron 50.0%
! AGTATGGGTATGACTGGTCC+AGG - chr3_1:80767252-80767271 None:intergenic 50.0%
TGTAATAGCCCCCCACAAGA+TGG + chr3_1:80767865-80767884 Msa0379590:intron 50.0%
ACCAATCTCCATCTTGTGGG+GGG - chr3_1:80767876-80767895 None:intergenic 50.0%
GTGAGGGAAAAGCTTCATGC+TGG - chr3_1:80768015-80768034 None:intergenic 50.0%
TTGTCCTGAGATGGAACGTC+TGG + chr3_1:80768296-80768315 Msa0379590:intron 50.0%
GATACCAGACGTTCCATCTC+AGG - chr3_1:80768303-80768322 None:intergenic 50.0%
CCTCAGGCTTACACATTCAG+GGG - chr3_1:80768356-80768375 None:intergenic 50.0%
GTCCTCAGGCTTACACATTC+AGG - chr3_1:80768358-80768377 None:intergenic 50.0%
AATGTGTAAGCCTGAGGACC+TGG + chr3_1:80768359-80768378 Msa0379590:intron 50.0%
ATGTGTAAGCCTGAGGACCT+GGG + chr3_1:80768360-80768379 Msa0379590:intron 50.0%
CTTAAAGGTTCTCCAGGTCG+TGG - chr3_1:80768396-80768415 None:intergenic 50.0%
CACGACCTGGAGAACCTTTA+AGG + chr3_1:80768394-80768413 Msa0379590:intron 50.0%
! CAAAGCACGTTTGGTAGCCA+AGG - chr3_1:80769213-80769232 None:intergenic 50.0%
GTGGAAACCCTAAGAGGAAC+AGG + chr3_1:80769584-80769603 Msa0379590:intron 50.0%
AGAGGAACAGGAATAGGTGG+AGG + chr3_1:80769596-80769615 Msa0379590:intron 50.0%
!! AGGAATAGGTGGAGGTGTTG+AGG + chr3_1:80769604-80769623 Msa0379590:intron 50.0%
!! ATAGGTGGAGGTGTTGAGGA+AGG + chr3_1:80769608-80769627 Msa0379590:intron 50.0%
! TGCCAATTGGTGGTAGAGGA+AGG + chr3_1:80769785-80769804 Msa0379590:intron 50.0%
CTCCTTCCTCTACCACCAAT+TGG - chr3_1:80769790-80769809 None:intergenic 50.0%
! ATTGGTGGTAGAGGAAGGAG+AGG + chr3_1:80769790-80769809 Msa0379590:intron 50.0%
! TGGTTTGTGCTAGCAGGGTT+AGG + chr3_1:80771204-80771223 Msa0379590:intron 50.0%
GGTTTGACTCAGGAGCAGTA+TGG - chr3_1:80771282-80771301 None:intergenic 50.0%
GCAAGAAGGACAAATGCTCG+TGG - chr3_1:80771513-80771532 None:intergenic 50.0%
GGAAAGGGACAAGTGCAAAC+AGG + chr3_1:80771774-80771793 Msa0379590:intron 50.0%
GGACAAGTGCAAACAGGCAT+GGG + chr3_1:80771780-80771799 Msa0379590:intron 50.0%
CGTTCTATGCAACGTGCTCT+TGG - chr3_1:80772131-80772150 None:intergenic 50.0%
! AAGCTTCAATGGCGGAAGCT+AGG + chr3_1:80772500-80772519 Msa0379590:intron 50.0%
! AGCTTCAATGGCGGAAGCTA+GGG + chr3_1:80772501-80772520 Msa0379590:intron 50.0%
CCTTCTCCTCAGGATAAGAG+CGG - chr3_1:80773615-80773634 None:intergenic 50.0%
GGGTGTTTACTAGTAGCTGC+TGG + chr3_1:80773656-80773675 Msa0379590:CDS 50.0%
AGACGCGGCCCTTTCTAATT+GGG - chr3_1:80774203-80774222 None:intergenic 50.0%
AAGACGCGGCCCTTTCTAAT+TGG - chr3_1:80774204-80774223 None:intergenic 50.0%
CATGCTAGCCCACCTATCAA+AGG + chr3_1:80774376-80774395 Msa0379590:intron 50.0%
TTCTTGTGCCTTTCAAGCCG+GGG + chr3_1:80774763-80774782 Msa0379590:CDS 50.0%
! TATTGAAGCCCCGGCTTGAA+AGG - chr3_1:80774774-80774793 None:intergenic 50.0%
AGCCGGGGCTTCAATAATCA+AGG + chr3_1:80774778-80774797 Msa0379590:CDS 50.0%
! CGATGGTGCCTTGTTAGCAT+TGG - chr3_1:80775718-80775737 None:intergenic 50.0%
GGAAGGCAAGTAGGAAGATG+TGG - chr3_1:80776433-80776452 None:intergenic 50.0%
CAAAACCTGTAGGGACATGG+TGG - chr3_1:80776699-80776718 None:intergenic 50.0%
!! GGTTTTGTATGTGGTGACGC+TGG + chr3_1:80776712-80776731 Msa0379590:intron 50.0%
! GTGTCCTGTGGCAGAAGTAT+AGG + chr3_1:80776778-80776797 Msa0379590:intron 50.0%
! GTCCTGTGGCAGAAGTATAG+GGG + chr3_1:80776780-80776799 Msa0379590:intron 50.0%
! GCAGAAGTATAGGGGACTGA+TGG + chr3_1:80776788-80776807 Msa0379590:intron 50.0%
GGCTTCTCATCTGAGGACTA+AGG - chr3_1:80776917-80776936 None:intergenic 50.0%
!! TTTGGCTGGCTTCTCATCTG+AGG - chr3_1:80776924-80776943 None:intergenic 50.0%
CACCATCACAACCTGAGACA+TGG - chr3_1:80777136-80777155 None:intergenic 50.0%
CACACACGTGCACACATAGA+GGG - chr3_1:80777300-80777319 None:intergenic 50.0%
TCACACACGTGCACACATAG+AGG - chr3_1:80777301-80777320 None:intergenic 50.0%
! GTTCCTCCCTCTGGAAGATA+TGG - chr3_1:80777444-80777463 None:intergenic 50.0%
CTCAATGTTGTTCCTCCCTC+TGG - chr3_1:80777453-80777472 None:intergenic 50.0%
! TACACTGATGCTGACTGGGC+AGG - chr3_1:80768333-80768352 None:intergenic 55.0%
! GGGGTACACTGATGCTGACT+GGG - chr3_1:80768337-80768356 None:intergenic 55.0%
! AGGGGTACACTGATGCTGAC+TGG - chr3_1:80768338-80768357 None:intergenic 55.0%
CCCCTGAATGTGTAAGCCTG+AGG + chr3_1:80768353-80768372 Msa0379590:intron 55.0%
TGTGTAAGCCTGAGGACCTG+GGG + chr3_1:80768361-80768380 Msa0379590:intron 55.0%
! CTTTTCTTCCCCAGGTCCTC+AGG - chr3_1:80768372-80768391 None:intergenic 55.0%
CTGAGGACCTGGGGAAGAAA+AGG + chr3_1:80768370-80768389 Msa0379590:intron 55.0%
CAGCAAGGGAATCACCAGCA+AGG + chr3_1:80768799-80768818 Msa0379590:intron 55.0%
GATGCAGAAGCTGGGGAATC+AGG + chr3_1:80769755-80769774 Msa0379590:intron 55.0%
ACCTGAGGTGAAGGCAGGAA+TGG + chr3_1:80771170-80771189 Msa0379590:intron 55.0%
TCCATTCCTGCCTTCACCTC+AGG - chr3_1:80771174-80771193 None:intergenic 55.0%
TGTGCTAGCAGGGTTAGGAC+TGG + chr3_1:80771209-80771228 Msa0379590:intron 55.0%
! GGGTTAGGACTGGTGGTTTG+AGG + chr3_1:80771219-80771238 Msa0379590:intron 55.0%
TCAGGAGCAGTATGGTCGTC+TGG - chr3_1:80771274-80771293 None:intergenic 55.0%
GGGACAAGTGCAAACAGGCA+TGG + chr3_1:80771779-80771798 Msa0379590:intron 55.0%
GCATAGAACGACTCCATGCG+AGG + chr3_1:80772141-80772160 Msa0379590:intron 55.0%
ACAACAATCGGAGCTCGACG+AGG + chr3_1:80772257-80772276 Msa0379590:intron 55.0%
! CAATGGCGGAAGCTAGGGTT+TGG + chr3_1:80772506-80772525 Msa0379590:intron 55.0%
CCGCTCTTATCCTGAGGAGA+AGG + chr3_1:80773612-80773631 Msa0379590:CDS 55.0%
GCTTCAGTTGTAGTTGGCGC+TGG - chr3_1:80774180-80774199 None:intergenic 55.0%
GACGCGGCCCTTTCTAATTG+GGG - chr3_1:80774202-80774221 None:intergenic 55.0%
! GCCCACCTATCAAAGGCACA+TGG + chr3_1:80774383-80774402 Msa0379590:intron 55.0%
GCGCGTAGTTCAGACTCACT+TGG - chr3_1:80774419-80774438 None:intergenic 55.0%
! ACCTGTAGGGACATGGTGGA+AGG - chr3_1:80776695-80776714 None:intergenic 55.0%
ATATCGGGGCTTGTGTCCTG+TGG + chr3_1:80776766-80776785 Msa0379590:intron 55.0%
GTCCCCTATACTTCTGCCAC+AGG - chr3_1:80776785-80776804 None:intergenic 55.0%
ACGTAGAGCAGCGGAAGCAA+GGG - chr3_1:80777161-80777180 None:intergenic 55.0%
TACGTAGAGCAGCGGAAGCA+AGG - chr3_1:80777162-80777181 None:intergenic 55.0%
ACACATAGAGGGAGAGGGAG+AGG - chr3_1:80777289-80777308 None:intergenic 55.0%
CGTGCACACATAGAGGGAGA+GGG - chr3_1:80777294-80777313 None:intergenic 55.0%
ACGTGCACACATAGAGGGAG+AGG - chr3_1:80777295-80777314 None:intergenic 55.0%
ACAACACAACCCGACCTGCT+AGG + chr3_1:80777523-80777542 Msa0379590:CDS 55.0%
! TAGAGCACCAACTGCCAAGC+TGG - chr3_1:80777609-80777628 None:intergenic 55.0%
! GGCAGTTGGTGCTCTAACCA+TGG + chr3_1:80777613-80777632 Msa0379590:three_prime_UTR 55.0%
GCCCCCCACAAGATGGAGAT+TGG + chr3_1:80767872-80767891 Msa0379590:intron 60.0%
! GTCGTGGCCTTTTCTTCCCC+AGG - chr3_1:80768380-80768399 None:intergenic 60.0%
GGGAAGAAAAGGCCACGACC+TGG + chr3_1:80768381-80768400 Msa0379590:intron 60.0%
GCTAGCAGGGTTAGGACTGG+TGG + chr3_1:80771212-80771231 Msa0379590:intron 60.0%
GCTAGCGCCAACAGTAGCTG+AGG + chr3_1:80774024-80774043 Msa0379590:intron 60.0%
!! TGTAGTTGGCGCTGGCTGAC+TGG - chr3_1:80774172-80774191 None:intergenic 60.0%
GCCTTCCACCATGTCCCTAC+AGG + chr3_1:80776691-80776710 Msa0379590:intron 60.0%
! GTGACGCTGGCTACTGAGCA+TGG + chr3_1:80776725-80776744 Msa0379590:intron 60.0%
! ACGCTGGCTACTGAGCATGG+TGG + chr3_1:80776728-80776747 Msa0379590:intron 60.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 80766069 80777895 80766069 ID=Msa0379590;Name=Msa0379590
chr3_1 mRNA 80766069 80777895 80766069 ID=Msa0379590-mRNA-1;Parent=Msa0379590;Name=Msa0379590-mRNA-1;_AED=0.06;_eAED=0.06;_QI=49|1|1|1|1|1|10|329|416
chr3_1 exon 80766069 80766479 80766069 ID=Msa0379590-mRNA-1:exon:20193;Parent=Msa0379590-mRNA-1
chr3_1 exon 80766585 80766730 80766585 ID=Msa0379590-mRNA-1:exon:20194;Parent=Msa0379590-mRNA-1
chr3_1 exon 80767241 80767278 80767241 ID=Msa0379590-mRNA-1:exon:20195;Parent=Msa0379590-mRNA-1
chr3_1 exon 80773584 80773699 80773584 ID=Msa0379590-mRNA-1:exon:20196;Parent=Msa0379590-mRNA-1
chr3_1 exon 80774700 80774799 80774700 ID=Msa0379590-mRNA-1:exon:20197;Parent=Msa0379590-mRNA-1
chr3_1 exon 80774882 80774917 80774882 ID=Msa0379590-mRNA-1:exon:20198;Parent=Msa0379590-mRNA-1
chr3_1 exon 80775046 80775096 80775046 ID=Msa0379590-mRNA-1:exon:20199;Parent=Msa0379590-mRNA-1
chr3_1 exon 80776275 80776389 80776275 ID=Msa0379590-mRNA-1:exon:20200;Parent=Msa0379590-mRNA-1
chr3_1 exon 80777144 80777269 80777144 ID=Msa0379590-mRNA-1:exon:20201;Parent=Msa0379590-mRNA-1
chr3_1 exon 80777406 80777895 80777406 ID=Msa0379590-mRNA-1:exon:20202;Parent=Msa0379590-mRNA-1
chr3_1 five_prime_UTR 80766069 80766117 80766069 ID=Msa0379590-mRNA-1:five_prime_utr;Parent=Msa0379590-mRNA-1
chr3_1 CDS 80766118 80766479 80766118 ID=Msa0379590-mRNA-1:cds;Parent=Msa0379590-mRNA-1
chr3_1 CDS 80766585 80766730 80766585 ID=Msa0379590-mRNA-1:cds;Parent=Msa0379590-mRNA-1
chr3_1 CDS 80767241 80767278 80767241 ID=Msa0379590-mRNA-1:cds;Parent=Msa0379590-mRNA-1
chr3_1 CDS 80773584 80773699 80773584 ID=Msa0379590-mRNA-1:cds;Parent=Msa0379590-mRNA-1
chr3_1 CDS 80774700 80774799 80774700 ID=Msa0379590-mRNA-1:cds;Parent=Msa0379590-mRNA-1
chr3_1 CDS 80774882 80774917 80774882 ID=Msa0379590-mRNA-1:cds;Parent=Msa0379590-mRNA-1
chr3_1 CDS 80775046 80775096 80775046 ID=Msa0379590-mRNA-1:cds;Parent=Msa0379590-mRNA-1
chr3_1 CDS 80776275 80776389 80776275 ID=Msa0379590-mRNA-1:cds;Parent=Msa0379590-mRNA-1
chr3_1 CDS 80777144 80777269 80777144 ID=Msa0379590-mRNA-1:cds;Parent=Msa0379590-mRNA-1
chr3_1 CDS 80777406 80777566 80777406 ID=Msa0379590-mRNA-1:cds;Parent=Msa0379590-mRNA-1
chr3_1 three_prime_UTR 80777567 80777895 80777567 ID=Msa0379590-mRNA-1:three_prime_utr;Parent=Msa0379590-mRNA-1
Gene Sequence

>Msa0379590

ATGGCAGTTTATTCAACCTTCTTATTCAATTCTTCTTCATTCTCTTCTCATTCTCATTTCAATTTTCACAATCTCAAACTCAAAAACCTAAATTCAAATTCAATGTCTTCTTCTTCTTCTTCACTTCCAATAAAATCACCCTTCCATTTACCTTCTTCCAATCTCAAACATCGAACAGTTTTCAAATTCCAATCTTCATCTTCTTCCTCTTCTTCCGATTGGTCCACTGCAACTAAAAAAACTGTTTTATTAACCTCCGCAACTACCGTTTCTTTAGCTGTTGCTAATCGCGTTCTTTATAAATTAGCCCTTGTTCCTATGAGTAATTATCCTTTTTTCCTCGCTCAGTTAAATACTTTTGGGTATGTTGTTATATACTTTAGCATTTTGTATATACGATACCGGTTAGGAATTGTTACAAATGAGATGCTTGCAATTCCCAAATGGCGGTTTTTTGTTATCGGGTTTTTGGAAGCTTTGGGATTGGTTTCTGGAATGTCTGCTGGAGCAATACTTCCTGGACCAGTCATACCCATACTGAATCAGACTTTTTTAGTTTGGCAGTTGATGTTTTCCGCTCTTATCCTGAGGAGAAGGTACTCAATTAACCAAATTGTTGGGTGTTTACTAGTAGCTGCTGGTGTTGTGATTGCTATCTCAAGTGGCTCTAATGCAGGTCAAATGCTCTCTAAAGTTGATTTCGTGTGGCCAGCATTGATGATAGTTTCTTGTGCCTTTCAAGCCGGGGCTTCAATAATCAAGGAATTTGTTTTTCTTGATTCTTCCACTCGATTAAAGCAAAAGTCGTTGGATATATTTGTGGTCAATTCTTTTGGATCCGGATTTCAGGCTCTTTTCGTGCTTCTCTTTCTACCTTTAATCTCGAACTTGAAAGGAATACCATTTGTTCAACTACCTTCATATCTTAAAAGTGGTGCTGGTTGCTTTCTAAACATTGGAGCTGGTTGTGATGGTGCTCCCTTGCTTCCGCTGCTCTACGTAGTTACCAATTTGGCATTCAACATATCCCTGCTTAACGTACTAAAAAGTTCTTCTGCAGTTGTTGCTTCTCTCATGTTAATGTTGTCAGTGCCAATTTCTGTTTATGTTCTTTCCCTTCCATTACCATATCTTCCAGAGGGAGGAACAACATTGAGCCCATTCTTTCTGCTTGGTTGTGCAATTCTTGTATGTGGGCTTTATACATACAACACAACCCGACCTGCTAGGAATAGTTCAGAAGTTGACTGA

Protein sequence

>Msa0379590

MAVYSTFLFNSSSFSSHSHFNFHNLKLKNLNSNSMSSSSSSLPIKSPFHLPSSNLKHRTVFKFQSSSSSSSSDWSTATKKTVLLTSATTVSLAVANRVLYKLALVPMSNYPFFLAQLNTFGYVVIYFSILYIRYRLGIVTNEMLAIPKWRFFVIGFLEALGLVSGMSAGAILPGPVIPILNQTFLVWQLMFSALILRRRYSINQIVGCLLVAAGVVIAISSGSNAGQMLSKVDFVWPALMIVSCAFQAGASIIKEFVFLDSSTRLKQKSLDIFVVNSFGSGFQALFVLLFLPLISNLKGIPFVQLPSYLKSGAGCFLNIGAGCDGAPLLPLLYVVTNLAFNISLLNVLKSSSAVVASLMLMLSVPISVYVLSLPLPYLPEGGTTLSPFFLLGCAILVCGLYTYNTTRPARNSSEVD*