AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1345490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1345490 MtrunA17_Chr3g0133011 88.710 496 29 3 1 469 1 496 0.0 897
Msa1345490 MtrunA17_Chr2g0285351 64.392 469 132 6 26 469 11 469 0.0 600
Msa1345490 MtrunA17_Chr2g0285371 63.956 455 132 6 40 469 22 469 0.0 583
Msa1345490 MtrunA17_Chr2g0285381 62.363 457 131 8 39 469 24 465 0.0 561
Msa1345490 MtrunA17_Chr4g0009701 60.722 443 138 6 51 469 40 470 0.0 547
Msa1345490 MtrunA17_Chr4g0009681 58.458 467 156 7 27 469 15 467 0.0 543
Msa1345490 MtrunA17_Chr4g0009711 55.624 489 166 8 5 469 9 470 0.0 533
Msa1345490 MtrunA17_Chr4g0009651 57.788 443 151 6 51 469 40 470 0.0 528
Msa1345490 MtrunA17_Chr4g0009661 57.788 443 151 6 51 469 40 470 0.0 527
Msa1345490 MtrunA17_Chr4g0009671 57.763 438 147 7 57 469 11 435 1.05e-180 512
Msa1345490 MtrunA17_Chr4g0009641 56.433 443 133 7 51 469 40 446 1.79e-173 494
Msa1345490 MtrunA17_Chr4g0009721 49.465 467 151 8 27 469 14 419 2.00e-152 440
Msa1345490 MtrunA17_Chr8g0338461 38.911 496 242 9 28 469 7 495 7.71e-114 344
Msa1345490 MtrunA17_Chr3g0093971 41.299 431 234 7 49 465 25 450 2.26e-112 339
Msa1345490 MtrunA17_Chr7g0249431 37.827 497 246 8 23 464 5 493 2.32e-109 332
Msa1345490 MtrunA17_Chr7g0234051 37.897 504 250 10 20 469 1 495 1.37e-108 330
Msa1345490 MtrunA17_Chr7g0234041 35.043 468 216 12 31 433 5 449 6.51e-82 261
Msa1345490 MtrunA17_Chr4g0038311 31.317 463 285 14 28 469 12 462 9.62e-57 195
Msa1345490 MtrunA17_Chr2g0309541 28.294 463 297 11 23 465 11 458 1.24e-53 187
Msa1345490 MtrunA17_Chr2g0318911 29.487 468 295 12 17 465 7 458 2.90e-53 186
Msa1345490 MtrunA17_Chr2g0281621 29.474 475 278 16 23 464 9 459 6.24e-52 182
Msa1345490 MtrunA17_Chr2g0309511 29.158 463 289 12 26 464 9 456 2.39e-51 181
Msa1345490 MtrunA17_Chr4g0068841 27.984 486 291 15 23 465 3 472 4.54e-51 180
Msa1345490 MtrunA17_Chr4g0047861 30.405 444 267 13 48 464 51 479 7.59e-50 177
Msa1345490 MtrunA17_Chr2g0309521 28.078 463 294 12 26 464 9 456 4.98e-49 174
Msa1345490 MtrunA17_Chr1g0199971 27.623 467 307 11 16 466 1 452 1.24e-48 173
Msa1345490 MtrunA17_Chr7g0219051 28.452 478 297 14 18 469 5 463 1.33e-48 173
Msa1345490 MtrunA17_Chr3g0131731 30.612 441 267 14 54 469 34 460 1.34e-48 173
Msa1345490 MtrunA17_Chr8g0385871 30.128 468 285 16 28 469 10 461 1.50e-48 173
Msa1345490 MtrunA17_Chr1g0199991 29.158 463 290 13 24 466 8 452 2.82e-48 172
Msa1345490 MtrunA17_Chr2g0279371 47.159 176 74 2 49 224 26 182 2.75e-47 161
Msa1345490 MtrunA17_Chr4g0068861 28.222 450 271 14 14 425 41 476 3.84e-46 166
Msa1345490 MtrunA17_Chr7g0221551 28.112 466 296 12 25 469 9 456 5.73e-46 166
Msa1345490 MtrunA17_Chr3g0118851 30.549 419 268 11 54 464 81 484 6.16e-46 166
Msa1345490 MtrunA17_Chr3g0118841 30.095 422 265 12 54 464 82 484 8.32e-45 163
Msa1345490 MtrunA17_Chr4g0020241 27.160 486 297 13 6 469 36 486 1.60e-44 162
Msa1345490 MtrunA17_Chr2g0304931 28.986 414 239 12 83 464 66 456 3.15e-44 161
Msa1345490 MtrunA17_Chr3g0090331 27.111 450 270 13 47 469 71 489 3.30e-43 159
Msa1345490 MtrunA17_Chr3g0094811 26.681 476 305 14 15 469 1 453 3.50e-43 158
Msa1345490 MtrunA17_Chr4g0028271 27.833 406 248 11 81 464 109 491 5.39e-43 159
Msa1345490 MtrunA17_Chr3g0126031 27.897 466 286 15 25 464 9 450 3.50e-42 155
Msa1345490 MtrunA17_Chr3g0126051 27.171 449 268 15 50 464 34 457 7.62e-42 155
Msa1345490 MtrunA17_Chr1g0153881 31.336 434 254 17 47 464 86 491 1.26e-41 155
Msa1345490 MtrunA17_Chr3g0118881 29.630 432 263 13 54 464 81 492 3.17e-41 154
Msa1345490 MtrunA17_Chr4g0028261 27.543 403 254 12 81 464 130 513 8.58e-41 152
Msa1345490 MtrunA17_Chr3g0118831 28.842 423 253 12 47 464 74 453 2.50e-40 150
Msa1345490 MtrunA17_Chr5g0431301 26.697 442 286 13 49 465 28 456 2.92e-40 150
Msa1345490 MtrunA17_Chr4g0028241 26.634 413 252 10 80 465 100 488 1.08e-38 146
Msa1345490 MtrunA17_Chr3g0118891 29.157 415 246 12 54 464 81 451 1.32e-38 145
Msa1345490 MtrunA17_Chr2g0281641 29.602 402 234 17 101 469 1 386 1.89e-37 141
Msa1345490 MtrunA17_Chr1g0153941 27.609 460 268 16 45 464 72 506 3.40e-37 142
Msa1345490 MtrunA17_Chr4g0028281 26.566 399 262 9 81 464 107 489 1.66e-36 140
Msa1345490 MtrunA17_Chr2g0327401 26.107 429 281 12 54 464 85 495 1.96e-36 140
Msa1345490 MtrunA17_Chr1g0199171 25.366 410 251 11 81 463 102 483 7.26e-36 139
Msa1345490 MtrunA17_Chr1g0204191 27.439 492 289 19 3 469 41 489 9.07e-36 138
Msa1345490 MtrunA17_Chr1g0171411 25.862 406 255 11 81 463 95 477 2.89e-35 137
Msa1345490 MtrunA17_Chr3g0118861 27.126 435 256 14 47 464 72 462 1.69e-33 132
Msa1345490 MtrunA17_Chr2g0327381 32.331 266 163 8 13 272 39 293 4.90e-33 131
Msa1345490 MtrunA17_Chr5g0447441 25.556 450 282 15 39 464 12 432 4.93e-32 127
Msa1345490 MtrunA17_Chr2g0285401 77.419 62 14 0 372 433 29 90 1.18e-30 114
Msa1345490 MtrunA17_Chr2g0327371 32.319 263 145 7 13 272 39 271 7.30e-30 122
Msa1345490 MtrunA17_Chr2g0279381 28.972 214 125 3 237 427 2 211 8.85e-27 107
Msa1345490 MtrunA17_Chr4g0044051 23.501 417 273 12 67 464 47 436 5.93e-24 104
Msa1345490 MtrunA17_Chr1g0165811 31.667 240 134 8 42 274 22 238 8.34e-24 100
Msa1345490 MtrunA17_Chr1g0153931 35.106 188 110 5 51 235 76 254 1.73e-23 99.8
Msa1345490 MtrunA17_Chr6g0457241 55.357 56 25 0 394 449 1 56 5.56e-16 72.0
Msa1345490 MtrunA17_Chr1g0165821 27.419 124 84 2 352 469 54 177 1.96e-13 68.6
Msa1345490 MtrunA17_Chr1g0153921 26.667 210 141 8 260 464 9 210 1.08e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1345490 AT1G33540.1 52.561 449 176 6 48 469 26 464 8.07e-162 466
Msa1345490 AT1G73300.1 55.687 422 177 4 48 469 30 441 2.61e-160 461
Msa1345490 AT1G73300.2 55.687 422 177 4 48 469 30 441 2.61e-160 461
Msa1345490 AT5G09640.1 51.380 471 190 8 27 469 6 465 5.48e-160 461
Msa1345490 AT2G22920.2 53.563 435 166 5 49 469 23 435 1.12e-159 459
Msa1345490 AT3G10450.1 54.353 425 184 4 45 469 23 437 1.88e-159 459
Msa1345490 AT2G23000.1 53.333 435 167 6 50 469 24 437 3.32e-159 458
Msa1345490 AT2G23000.2 53.333 435 167 6 50 469 24 437 3.32e-159 458
Msa1345490 AT3G12240.1 53.396 427 185 5 45 469 22 436 1.21e-158 456
Msa1345490 AT5G36180.1 55.450 422 178 4 48 469 30 441 1.22e-157 454
Msa1345490 AT3G12230.1 53.286 426 187 5 45 469 21 435 1.42e-157 454
Msa1345490 AT1G73290.1 53.456 434 166 5 48 469 29 438 1.46e-157 454
Msa1345490 AT3G12203.3 54.893 419 178 6 51 469 9 416 1.75e-157 453
Msa1345490 AT3G12203.1 53.846 429 187 6 41 469 20 437 1.81e-157 454
Msa1345490 AT1G73280.1 53.286 426 187 5 45 469 27 441 1.32e-156 451
Msa1345490 AT2G22990.1 53.756 426 187 5 45 469 17 433 3.64e-156 450
Msa1345490 AT2G22980.1 54.265 422 177 6 49 469 24 430 3.96e-156 450
Msa1345490 AT1G73310.1 54.374 423 181 5 48 469 30 441 2.13e-155 448
Msa1345490 AT1G73270.2 54.502 422 182 4 48 469 30 441 4.77e-155 447
Msa1345490 AT2G22970.1 52.535 434 170 6 49 469 23 433 5.26e-155 447
Msa1345490 AT1G73270.1 54.502 422 182 4 48 469 30 441 9.00e-155 447
Msa1345490 AT2G23010.1 51.333 450 203 6 23 469 1 437 4.34e-152 440
Msa1345490 AT1G33540.2 52.336 428 167 6 69 469 4 421 1.25e-151 438
Msa1345490 AT3G12220.1 53.919 421 184 4 45 465 21 431 3.07e-151 437
Msa1345490 AT2G23010.2 50.889 450 205 6 23 469 1 437 1.25e-150 436
Msa1345490 AT2G22990.5 51.878 426 186 6 45 469 17 424 6.16e-147 426
Msa1345490 AT3G10450.4 53.133 399 178 3 45 443 23 412 8.83e-147 426
Msa1345490 AT3G10450.2 53.367 401 177 4 69 469 4 394 1.32e-146 424
Msa1345490 AT2G22970.3 52.195 410 161 5 49 445 23 410 7.60e-146 424
Msa1345490 AT2G22970.4 52.206 408 160 5 49 443 23 408 1.04e-145 423
Msa1345490 AT2G22980.2 53.535 396 169 5 49 443 24 405 3.63e-145 421
Msa1345490 AT2G22980.4 53.535 396 169 5 49 443 24 405 8.90e-145 421
Msa1345490 AT2G22990.3 53.117 401 179 4 48 447 20 412 2.29e-144 421
Msa1345490 AT2G22990.4 53.000 400 179 4 45 443 17 408 2.54e-144 419
Msa1345490 AT3G12203.2 53.368 386 173 4 84 469 1 379 1.53e-140 408
Msa1345490 AT1G73310.2 53.627 386 168 4 48 432 30 405 1.16e-138 405
Msa1345490 AT2G22920.1 51.777 394 155 4 49 428 23 395 1.86e-138 404
Msa1345490 AT3G12220.2 53.149 397 176 4 69 465 15 401 3.13e-138 404
Msa1345490 AT1G73290.3 52.163 393 153 4 48 428 29 398 7.87e-138 402
Msa1345490 AT3G10450.3 52.000 375 171 3 69 443 4 369 9.60e-134 391
Msa1345490 AT3G12220.3 49.522 418 149 5 48 465 24 379 2.47e-130 382
Msa1345490 AT5G36180.5 52.174 345 159 3 125 469 1 339 3.83e-116 345
Msa1345490 AT5G36180.3 52.174 345 159 3 125 469 1 339 3.83e-116 345
Msa1345490 AT4G12910.1 38.323 501 241 9 19 464 5 492 3.64e-115 348
Msa1345490 AT1G73280.4 50.289 346 164 4 125 469 1 339 7.84e-115 341
Msa1345490 AT1G73280.2 49.855 345 162 4 45 388 27 361 6.13e-111 333
Msa1345490 AT2G22990.6 51.852 324 150 4 147 469 1 319 2.10e-107 322
Msa1345490 AT2G22980.3 49.854 343 155 6 49 388 24 352 3.23e-107 322
Msa1345490 AT2G22990.2 51.235 324 152 4 147 469 1 319 5.10e-106 318
Msa1345490 AT1G73280.3 50.467 321 151 4 150 469 1 314 1.44e-105 317
Msa1345490 AT5G36180.2 50.938 320 152 2 125 444 1 315 1.96e-105 317
Msa1345490 AT2G22920.4 55.926 270 115 1 49 318 23 288 3.54e-105 316
Msa1345490 AT3G25420.1 36.162 495 255 9 24 465 4 490 1.88e-102 315
Msa1345490 AT2G22970.2 54.815 270 117 2 49 318 23 287 3.17e-102 308
Msa1345490 AT1G73290.2 54.710 276 119 2 48 323 29 298 2.99e-101 305
Msa1345490 AT4G12910.2 37.069 464 224 9 19 427 5 455 5.63e-98 302
Msa1345490 AT1G73310.3 49.675 308 148 3 126 432 2 303 2.62e-96 293
Msa1345490 AT5G36180.4 46.132 349 157 3 125 459 1 332 2.82e-95 291
Msa1345490 AT2G22980.5 50.000 298 138 4 147 443 1 288 2.85e-94 287
Msa1345490 AT2G22920.3 50.368 272 103 4 212 469 3 256 1.92e-84 260
Msa1345490 AT5G23210.1 31.130 469 265 13 42 469 43 494 8.76e-59 201
Msa1345490 AT3G52020.1 30.110 455 277 10 35 469 64 497 1.64e-57 198
Msa1345490 AT3G52000.1 29.515 454 283 10 31 469 47 478 2.85e-56 194
Msa1345490 AT4G30810.1 29.087 471 284 15 26 469 14 461 1.53e-54 189
Msa1345490 AT3G17180.1 30.805 435 254 15 67 469 55 474 3.00e-54 189
Msa1345490 AT1G61130.1 29.978 457 280 13 39 468 15 458 3.92e-53 185
Msa1345490 AT3G52010.1 28.062 449 281 11 42 469 56 483 8.51e-53 185
Msa1345490 AT2G05850.1 29.515 454 269 16 42 469 55 483 3.03e-52 184
Msa1345490 AT4G15100.1 30.172 464 267 15 43 469 37 480 4.54e-52 183
Msa1345490 AT5G08260.1 28.571 490 292 13 19 469 5 475 5.91e-52 182
Msa1345490 AT2G22960.1 66.942 121 39 1 349 469 65 184 6.67e-52 174
Msa1345490 AT4G30610.1 30.898 479 288 16 16 469 1 461 8.52e-52 182
Msa1345490 AT1G11080.1 29.243 489 298 14 15 468 12 487 3.16e-50 178
Msa1345490 AT1G11080.2 29.243 489 298 14 15 468 12 487 3.28e-50 178
Msa1345490 AT5G23210.3 30.588 425 238 12 42 425 43 451 1.12e-48 173
Msa1345490 AT2G24010.1 29.545 440 277 12 47 469 27 450 2.39e-47 170
Msa1345490 AT2G24000.1 28.924 446 274 12 47 465 27 456 3.60e-47 169
Msa1345490 AT3G07990.1 27.703 444 269 12 54 469 37 456 2.93e-46 167
Msa1345490 AT3G63470.1 27.556 450 268 13 47 469 78 496 5.31e-46 167
Msa1345490 AT1G28110.1 28.764 445 280 12 47 469 28 457 1.20e-45 165
Msa1345490 AT1G28110.2 28.764 445 280 12 47 469 28 457 1.20e-45 165
Msa1345490 AT2G35770.1 28.145 469 312 12 14 469 1 457 1.34e-45 165
Msa1345490 AT2G35780.1 30.664 437 263 15 54 469 33 450 3.25e-45 164
Msa1345490 AT2G33530.1 28.222 450 280 15 46 469 29 461 1.28e-44 162
Msa1345490 AT3G17180.2 29.798 396 231 15 67 430 55 435 2.41e-43 158
Msa1345490 AT1G43780.1 26.793 474 300 12 21 464 8 464 1.25e-42 157
Msa1345490 AT2G24010.2 28.352 455 278 13 47 469 27 465 2.52e-42 156
Msa1345490 AT5G23210.5 28.960 404 234 11 107 469 8 399 4.85e-42 154
Msa1345490 AT2G12480.1 27.982 436 274 13 41 465 20 426 5.85e-42 155
Msa1345490 AT2G12480.4 27.752 436 277 13 41 465 20 428 1.22e-41 154
Msa1345490 AT3G02110.1 28.352 455 278 16 46 469 33 470 1.63e-41 154
Msa1345490 AT5G23210.2 28.784 403 234 11 108 469 8 398 3.71e-41 152
Msa1345490 AT2G12480.3 27.111 450 286 13 41 465 20 452 2.43e-40 151
Msa1345490 AT2G12480.2 27.918 437 274 14 41 465 20 427 2.87e-40 150
Msa1345490 AT5G42240.1 27.640 445 282 13 47 465 29 459 4.40e-39 147
Msa1345490 AT3G45010.1 26.055 403 260 10 81 464 113 496 1.64e-38 147
Msa1345490 AT2G24010.3 27.766 479 269 17 50 469 1 461 4.11e-37 142
Msa1345490 AT5G22980.1 27.027 407 249 11 81 464 110 491 2.15e-36 140
Msa1345490 AT3G10410.1 26.161 409 254 12 81 466 111 494 8.17e-36 139
Msa1345490 AT5G42230.1 27.313 454 282 13 42 464 18 454 1.41e-35 138
Msa1345490 AT5G42230.2 27.313 454 282 13 42 464 18 454 1.41e-35 138
Msa1345490 AT5G23210.4 27.855 359 207 10 108 425 8 355 2.65e-31 124
Msa1345490 AT3G56540.1 36.872 179 102 4 32 209 61 229 4.02e-28 112
Msa1345490 AT2G24010.4 32.510 243 136 7 50 274 1 233 2.19e-25 107
Msa1345490 AT1G15000.1 23.990 396 268 11 81 464 47 421 3.12e-25 108
Msa1345490 AT5G22960.1 31.169 154 81 3 81 234 46 174 3.39e-21 91.7
Msa1345490 AT2G24000.2 24.113 282 184 6 208 465 118 393 1.74e-16 81.6

Find 139 sgRNAs with CRISPR-Local

Find 611 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTAGACAAAATACATTT+TGG 0.096140 tig0007210:+6689 Msa1345490:intergenic
GAAATTTCTTGAACGATAAT+TGG 0.114312 tig0007210:+9698 Msa1345490:intergenic
ACTTCATTTGAGATAAATTT+TGG 0.124987 tig0007210:+9758 Msa1345490:intergenic
CTGAGCAGCACTTTCTGTTT+TGG 0.144705 tig0007210:+9955 Msa1345490:intergenic
AGTTTCTGAAGTTCATATTT+TGG 0.182803 tig0007210:-5392 Msa1345490:CDS
AGCTGTCTTAATTCTCTTTA+TGG 0.196588 tig0007210:-1957 Msa1345490:three_prime_UTR
TTGTGTCCGCAGACTATTTC+AGG 0.208232 tig0007210:-5415 Msa1345490:intron
TCTGGCCTTGCCTTTGAAAT+AGG 0.222999 tig0007210:-11277 Msa1345490:intron
TTTATTCAGGGATACATATT+AGG 0.237635 tig0007210:-6989 Msa1345490:intron
CTTCCCTTTGTACTAGAAAC+TGG 0.261645 tig0007210:-11436 Msa1345490:CDS
CTCCAAGAGTATATATATAA+AGG 0.272621 tig0007210:-1863 Msa1345490:three_prime_UTR
TGTGGCCTCAAGATCAAATT+TGG 0.274400 tig0007210:+10738 Msa1345490:intergenic
ACAATGCTCATCAATTTCTT+AGG 0.313187 tig0007210:-9910 Msa1345490:CDS
AGGGAACCAGGGTGAGAAAA+AGG 0.314860 tig0007210:-1843 Msa1345490:three_prime_UTR
CGCAATTTCACACGACTTGT+AGG 0.316748 tig0007210:+1918 Msa1345490:intergenic
CCTCTCTTGCTTTGGTTAAC+CGG 0.319336 tig0007210:-11322 Msa1345490:CDS
GTAAGAGAAGAAGTAAAGAT+AGG 0.320146 tig0007210:+5292 Msa1345490:intergenic
TTCAGGGAAGTATAGGAAAA+TGG 0.324426 tig0007210:-2836 Msa1345490:intron
TAATTCTCTTTATGGCATAT+TGG 0.332579 tig0007210:-1949 Msa1345490:three_prime_UTR
GAAAACAAGAAACTCTAAAA+TGG 0.340331 tig0007210:-11635 Msa1345490:exon
CATAAGGCTTACCTCTTGAT+AGG 0.346287 tig0007210:+6657 Msa1345490:intergenic
CTCCTACCATTGGCTTCCAT+TGG 0.356938 tig0007210:+5340 Msa1345490:intergenic
GGCAAACCAAACTCGCATTT+CGG 0.357922 tig0007210:+5367 Msa1345490:intergenic
ACTATTCCATCGTTGATGAT+TGG 0.363016 tig0007210:-2514 Msa1345490:CDS
CCTGGTTGCTCTGCTTTCTC+TGG 0.363794 tig0007210:-11295 Msa1345490:CDS
AACAAGATCCTCTCTTGCTT+TGG 0.366863 tig0007210:-11330 Msa1345490:CDS
AATATTGTAAAATTCCTTCC+TGG 0.368687 tig0007210:-11472 Msa1345490:CDS
TTGGAACCGAAATGCGAGTT+TGG 0.377727 tig0007210:-5373 Msa1345490:CDS
AGCAAGAGAGGATCTTGTTT+AGG 0.379525 tig0007210:+11334 Msa1345490:intergenic
AATATAGGAGCAAGTTCATT+TGG 0.380072 tig0007210:-2076 Msa1345490:three_prime_UTR
ATCATAATTAGTAATAATAT+AGG 0.381562 tig0007210:-2091 Msa1345490:three_prime_UTR
TGATCTTGAGGCCACATTCA+TGG 0.386096 tig0007210:-10731 Msa1345490:CDS
TCCCTTTATATATATACTCT+TGG 0.390301 tig0007210:+1861 Msa1345490:intergenic
GTTATCGTTCATTAATATAC+AGG 0.393033 tig0007210:-2734 Msa1345490:intron
TTGGATTTGCCTGTGGGTAC+TGG 0.395039 tig0007210:-9989 Msa1345490:CDS
TCGTGAGCTGGCCAAGTTAC+GGG 0.395449 tig0007210:+6962 Msa1345490:intergenic
TAGTAGAAGTGTAGAACTTT+TGG 0.398021 tig0007210:-1989 Msa1345490:three_prime_UTR
CCATTGGCTTCCATTGGATT+AGG 0.401839 tig0007210:+5346 Msa1345490:intergenic
AAATTTCTTGAACGATAATT+GGG 0.406294 tig0007210:+9699 Msa1345490:intergenic
AGAAACTGGGTACGTGGGAG+TGG 0.416081 tig0007210:-11422 Msa1345490:CDS
ATCGTTCAAGAAATTTCATA+TGG 0.418324 tig0007210:-9692 Msa1345490:intron
TCCTTTCTTGCAGGAAATGA+AGG 0.430756 tig0007210:-9383 Msa1345490:intron
GCTAGTTTGCAGATAAGAAC+AGG 0.436196 tig0007210:-11751 Msa1345490:five_prime_UTR
CTTTGGTTAACCGGTGGTCC+TGG 0.437882 tig0007210:-11313 Msa1345490:CDS
TCCAAGAGTATATATATAAA+GGG 0.437908 tig0007210:-1862 Msa1345490:three_prime_UTR
AAATCACATATACAATGGTA+TGG 0.445331 tig0007210:+1770 Msa1345490:intergenic
TTTGCAATTCAGGGAAGTAT+AGG 0.446212 tig0007210:-2843 Msa1345490:intron
CATGTAAATCTTAGCAGAAA+AGG 0.457089 tig0007210:-2756 Msa1345490:CDS
ACACAAGGACTTACTCAAAT+CGG 0.472972 tig0007210:-2367 Msa1345490:CDS
TAAGAGAAGAAGTAAAGATA+GGG 0.473636 tig0007210:+5293 Msa1345490:intergenic
TAGTGTCATAGGCTAGGAAT+AGG 0.477878 tig0007210:+2010 Msa1345490:intergenic
CATTGCCACCTTTATACTGT+CGG 0.480704 tig0007210:-5270 Msa1345490:CDS
GCATTCTTCACGTTTGTACT+CGG 0.481386 tig0007210:+2205 Msa1345490:intergenic
GGCTTACCTCTTGATAGGAC+TGG 0.482837 tig0007210:+6662 Msa1345490:intergenic
TATTCTAATTCTCAAGTAGC+AGG 0.482956 tig0007210:-2482 Msa1345490:CDS
TACAGAATAGCATTTAATCA+TGG 0.484071 tig0007210:-6932 Msa1345490:CDS
TCAAATGAAGTGTACATTGC+TGG 0.486070 tig0007210:-9746 Msa1345490:CDS
ATTGCCACCTTTATACTGTC+GGG 0.488453 tig0007210:-5269 Msa1345490:intron
ATTGCTGGTGACTCATACTC+AGG 0.491300 tig0007210:-9731 Msa1345490:CDS
GAAGTTACCCGACAGTATAA+AGG 0.492788 tig0007210:+5262 Msa1345490:intergenic
TATTAGGAAATCCCGTAACT+TGG 0.496027 tig0007210:-6973 Msa1345490:CDS
CATTCTTCACGTTTGTACTC+GGG 0.496306 tig0007210:+2206 Msa1345490:intergenic
ATCGTGAGCTGGCCAAGTTA+CGG 0.497789 tig0007210:+6961 Msa1345490:intergenic
ATAGTTCTTACCTATTTCAA+AGG 0.504314 tig0007210:+11267 Msa1345490:intergenic
TGCTCATCAATTTCTTAGGA+AGG 0.511515 tig0007210:-9906 Msa1345490:intron
TACCCAGTTTCTAGTACAAA+GGG 0.514651 tig0007210:+11433 Msa1345490:intergenic
GTGCTGCTCAGCAAAGCACT+TGG 0.520133 tig0007210:-9943 Msa1345490:CDS
ATTCCATCGTTGATGATTGG+AGG 0.525726 tig0007210:-2511 Msa1345490:CDS
ACTCTAAAATGGCAATGCTT+AGG 0.528452 tig0007210:-11624 Msa1345490:exon
ATGAAGGTGGTCTTCAACCG+TGG 0.533420 tig0007210:-9367 Msa1345490:CDS
GTTTGGTTTGCCTAATCCAA+TGG 0.534905 tig0007210:-5356 Msa1345490:CDS
CTACAAGTCGTGTGAAATTG+CGG 0.534935 tig0007210:-1917 Msa1345490:three_prime_UTR
TAAATGTATATAGTGGCTCA+TGG 0.536212 tig0007210:-9786 Msa1345490:intron
TACACTTCTACTAGTGTCAT+AGG 0.536966 tig0007210:+1999 Msa1345490:intergenic
AAGAAGTCTCCTCCTACCAT+TGG 0.539846 tig0007210:+5330 Msa1345490:intergenic
TCATCATGTTGAACTCAGCT+TGG 0.541098 tig0007210:+2125 Msa1345490:intergenic
GCTTACCAAATTTGATCTTG+AGG 0.543670 tig0007210:-10743 Msa1345490:CDS
TCTTACCTATTTCAAAGGCA+AGG 0.544344 tig0007210:+11272 Msa1345490:intergenic
TCAACCGTGGATAAACCTCC+AGG 0.544639 tig0007210:-9354 Msa1345490:intron
AATAGCATTTAATCATGGCA+TGG 0.545622 tig0007210:-6927 Msa1345490:CDS
TTCTTGAACGATAATTGGGA+CGG 0.547761 tig0007210:+9703 Msa1345490:intergenic
CCAGAGAAAGCAGAGCAACC+AGG 0.549843 tig0007210:+11295 Msa1345490:intergenic
TATATAAAATTACAGGGAGG+AGG 0.552360 tig0007210:-2239 Msa1345490:intron
GCATTAATTAATTCCTAGAG+TGG 0.553204 tig0007210:+2149 Msa1345490:intergenic
GTACCCAGTTTCTAGTACAA+AGG 0.554863 tig0007210:+11432 Msa1345490:intergenic
AATCACATATACAATGGTAT+GGG 0.557537 tig0007210:+1771 Msa1345490:intergenic
GATATCTAATTACCCACTCT+AGG 0.558407 tig0007210:-2162 Msa1345490:exon
GTATATATATAAAGGGAACC+AGG 0.560088 tig0007210:-1855 Msa1345490:three_prime_UTR
GTTATATCGTGAGAAGAAAG+TGG 0.561064 tig0007210:+2035 Msa1345490:intergenic
TCTTGAACGATAATTGGGAC+GGG 0.561378 tig0007210:+9704 Msa1345490:intergenic
AGCAGAGCAACCAGGACCAC+CGG 0.561403 tig0007210:+11303 Msa1345490:intergenic
GGAAGGGGTCCTTGAAAACC+AGG 0.563915 tig0007210:+11454 Msa1345490:intergenic
AGTTTCTAGTACAAAGGGAA+GGG 0.571335 tig0007210:+11438 Msa1345490:intergenic
ATAGCATTTAATCATGGCAT+GGG 0.578505 tig0007210:-6926 Msa1345490:CDS
TCAACCTTTGTCCATGAATG+TGG 0.581164 tig0007210:+10720 Msa1345490:intergenic
TTCCCTTTGTACTAGAAACT+GGG 0.581465 tig0007210:-11435 Msa1345490:CDS
CTCTTGCTTTGGTTAACCGG+TGG 0.584289 tig0007210:-11319 Msa1345490:CDS
TATTATAATCATCTTAAACA+AGG 0.586583 tig0007210:+11561 Msa1345490:intergenic
TCGTTGATGATTGGAGGCAG+TGG 0.586723 tig0007210:-2505 Msa1345490:CDS
CTGTAATTATCATCGTGAGC+TGG 0.588096 tig0007210:+6950 Msa1345490:intergenic
TTTCTTGCAGGAAATGAAGG+TGG 0.589166 tig0007210:-9380 Msa1345490:intron
ATTACAGGGAGGAGGACATA+CGG 0.590098 tig0007210:-2231 Msa1345490:intron
AGAAGAAGTAAAGATAGGGT+TGG 0.591023 tig0007210:+5297 Msa1345490:intergenic
TGTACTAGAAACTGGGTACG+TGG 0.593846 tig0007210:-11428 Msa1345490:CDS
TTCTACTAGTGTCATAGGCT+AGG 0.596512 tig0007210:+2004 Msa1345490:intergenic
CCGGTTAACCAAAGCAAGAG+AGG 0.598944 tig0007210:+11322 Msa1345490:intergenic
CAATGGAAGCCAATGGTAGG+AGG 0.599561 tig0007210:-5339 Msa1345490:CDS
AATGCTTAGCCATGTTCAGT+AGG 0.600787 tig0007210:-2187 Msa1345490:CDS
GTTTCTAGTACAAAGGGAAG+GGG 0.605701 tig0007210:+11439 Msa1345490:intergenic
GATGACATTTGCAACTGTGA+AGG 0.605807 tig0007210:-2345 Msa1345490:intron
CAGTTTCTAGTACAAAGGGA+AGG 0.613885 tig0007210:+11437 Msa1345490:intergenic
GCTTAGCCATGTTCAGTAGG+TGG 0.616283 tig0007210:-2184 Msa1345490:CDS
AGATATCCACCTACTGAACA+TGG 0.617483 tig0007210:+2178 Msa1345490:intergenic
TCAAAATTAATAATAGCACT+AGG 0.619335 tig0007210:-11698 Msa1345490:five_prime_UTR
AGACATCCAGTCCTATCAAG+AGG 0.620187 tig0007210:-6668 Msa1345490:intron
ATAAGAACAGGGAAGAGAAG+TGG 0.620377 tig0007210:-11668 Msa1345490:five_prime_UTR
CATTAATTAATTCCTAGAGT+GGG 0.623797 tig0007210:+2150 Msa1345490:intergenic
GAAACTGGGTACGTGGGAGT+GGG 0.629484 tig0007210:-11421 Msa1345490:CDS
GAGGCCACATTCATGGACAA+AGG 0.632336 tig0007210:-10724 Msa1345490:intron
TATATATATAAAGGGAACCA+GGG 0.632460 tig0007210:-1854 Msa1345490:three_prime_UTR
TAAGAGAATCCAGTACCCAC+AGG 0.632578 tig0007210:+9980 Msa1345490:intergenic
CCTAATCCAATGGAAGCCAA+TGG 0.635822 tig0007210:-5346 Msa1345490:CDS
ATTCTAATTCTCAAGTAGCA+GGG 0.636518 tig0007210:-2481 Msa1345490:intron
CGAACCTGGAGGTTTATCCA+CGG 0.642252 tig0007210:+9350 Msa1345490:intergenic
GTACTAGAAACTGGGTACGT+GGG 0.647701 tig0007210:-11427 Msa1345490:CDS
CTGCCTCCAATCATCAACGA+TGG 0.650091 tig0007210:+2508 Msa1345490:intergenic
TCATTGCAAAAGAACTGTAG+AGG 0.651663 tig0007210:-6733 Msa1345490:CDS
GAGGAGACTTCTTATTCACA+AGG 0.651795 tig0007210:-5320 Msa1345490:CDS
ATCCAATGGAAGCCAATGGT+AGG 0.665646 tig0007210:-5342 Msa1345490:CDS
AACAGGGAAGAGAAGTGGTG+TGG 0.668685 tig0007210:-11663 Msa1345490:five_prime_UTR
TGTTCTTATCTGCAAACTAG+CGG 0.669143 tig0007210:+11753 Msa1345490:intergenic
CTAGTTTGCAGATAAGAACA+GGG 0.671324 tig0007210:-11750 Msa1345490:five_prime_UTR
GTTACCCGACAGTATAAAGG+TGG 0.678423 tig0007210:+5265 Msa1345490:intergenic
TGAAACAGATGAAATTGCCG+CGG 0.678942 tig0007210:-11392 Msa1345490:CDS
GGGGTCCTTGAAAACCAGGA+AGG 0.688533 tig0007210:+11458 Msa1345490:intergenic
ATATTCTTGATAGATACACA+AGG 0.707905 tig0007210:-2382 Msa1345490:intron
AAAATAGTAGAACAATTCCG+CGG 0.712968 tig0007210:+11375 Msa1345490:intergenic
TATTTCTAATGAACTCTACG+AGG 0.724262 tig0007210:-6900 Msa1345490:intron
AGGCATAGTTCACATCACAG+TGG 0.792537 tig0007210:-11604 Msa1345490:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAAAAAAAATAAAAATT+TGG + tig0007210:7987-8006 Msa1345490:intergenic 0.0%
!!! AAAAACACTTTTTAAATTTT+TGG + tig0007210:2425-2444 Msa1345490:intergenic 10.0%
!! AATAATACTTATTAAACTAA+AGG + tig0007210:2514-2533 Msa1345490:intergenic 10.0%
!! TACCTTAATTATTAAATTTA+TGG - tig0007210:3435-3454 Msa1345490:intron 10.0%
!! GATAAAAAATATGAAAAATT+AGG - tig0007210:4241-4260 Msa1345490:intron 10.0%
!!! ATATGATTTTGATATATATT+CGG + tig0007210:4806-4825 Msa1345490:intergenic 10.0%
!!! ATATTTTCTTCAAAAAAAAA+AGG - tig0007210:5063-5082 Msa1345490:intron 10.0%
!!! TCTATTTTATACTTTTTTTT+CGG + tig0007210:5294-5313 Msa1345490:intergenic 10.0%
!!! AAAAAAAAGTATAAAATAGA+AGG - tig0007210:5294-5313 Msa1345490:CDS 10.0%
!!! TATTTTCTTCAAAATAAAAA+AGG - tig0007210:5347-5366 Msa1345490:CDS 10.0%
!! TATAAAAAATTATCTAACTT+GGG + tig0007210:5694-5713 Msa1345490:intergenic 10.0%
!! TTATAAAAAATTATCTAACT+TGG + tig0007210:5695-5714 Msa1345490:intergenic 10.0%
!!! AGATTATTTTTATGTAAAAA+CGG - tig0007210:7033-7052 Msa1345490:intron 10.0%
!! TTAAAATGTTATTATAAAGT+TGG - tig0007210:7243-7262 Msa1345490:intron 10.0%
!!! TATTTTAAATTTCACAATTT+TGG + tig0007210:7604-7623 Msa1345490:intergenic 10.0%
!!! AAAATTGTGAAATTTAAAAT+AGG - tig0007210:7603-7622 Msa1345490:intron 10.0%
!! AATTTATTATTAGAGTTTAA+TGG - tig0007210:8241-8260 Msa1345490:intron 10.0%
!! AAATTTGAGAAATTAATTAT+AGG + tig0007210:9070-9089 Msa1345490:intergenic 10.0%
!! TAAAATTAAATGATCAAAAT+TGG - tig0007210:9793-9812 Msa1345490:intron 10.0%
!!! GTTTTTTTTTTTTTTTTTCA+TGG - tig0007210:9904-9923 Msa1345490:intron 10.0%
!!! TTATTAATTTATGATTTTCT+TGG - tig0007210:10329-10348 Msa1345490:intron 10.0%
!!! TATTAATTTATGATTTTCTT+GGG - tig0007210:10330-10349 Msa1345490:intron 10.0%
!!! TAATAAGATAATAATTTTTC+GGG + tig0007210:10378-10397 Msa1345490:intergenic 10.0%
!!! TTTTTGTTTTTAATATAATC+TGG - tig0007210:10824-10843 Msa1345490:intron 10.0%
!! ATCATAATTAGTAATAATAT+AGG - tig0007210:11381-11400 Msa1345490:CDS 10.0%
!! TATTATAATCATCTTAAACA+AGG + tig0007210:1914-1933 Msa1345490:intergenic 15.0%
!! CACCATAAATTTAATAATTA+AGG + tig0007210:3440-3459 Msa1345490:intergenic 15.0%
!! CTTAATTATTAAATTTATGG+TGG - tig0007210:3438-3457 Msa1345490:intron 15.0%
!!! GGTAAGTAATATTATATTTT+TGG - tig0007210:3464-3483 Msa1345490:intron 15.0%
!!! TTACCGTTTTTTTTAATATA+TGG - tig0007210:3910-3929 Msa1345490:intron 15.0%
!! AGTCCATATATTAAAAAAAA+CGG + tig0007210:3916-3935 Msa1345490:intergenic 15.0%
!!! ATTTTTCATATTTTTTATCC+CGG + tig0007210:4240-4259 Msa1345490:intergenic 15.0%
!!! TTTTTTTTTTTGTTAAAGTG+TGG + tig0007210:4427-4446 Msa1345490:intergenic 15.0%
!!! TTAAATCCTTTTTATTTTGT+TGG + tig0007210:4550-4569 Msa1345490:intergenic 15.0%
!!! TGTGAGATATTATTTTTTTT+AGG - tig0007210:4882-4901 Msa1345490:intron 15.0%
!! CGTAACAAAATTAATAAATA+AGG - tig0007210:5207-5226 Msa1345490:intron 15.0%
!! AAATAAGGATGTAAAAAAAA+AGG - tig0007210:5222-5241 Msa1345490:intron 15.0%
!!! AATTTTACACTCTTTTTTTT+TGG + tig0007210:5266-5285 Msa1345490:intergenic 15.0%
!!! TTTTTTAAATGGAATTTGTT+AGG - tig0007210:5405-5424 Msa1345490:CDS 15.0%
!! CGTAACAAAATTAATAAATA+AGG - tig0007210:5207-5226 Msa1345490:intron 15.0%
!! TTAAATATATATAGTTCAGA+TGG - tig0007210:5586-5605 Msa1345490:intron 15.0%
!!! TAAAATAATCATTTAGAATC+CGG - tig0007210:5712-5731 Msa1345490:intron 15.0%
!! TAGATCAATAACATTAAATA+TGG + tig0007210:6257-6276 Msa1345490:intergenic 15.0%
!!! ATTAAAATCCTTTTTATTCA+GGG - tig0007210:6471-6490 Msa1345490:intron 15.0%
!!! AAAGAAAAGCTATATTTTTA+TGG + tig0007210:6973-6992 Msa1345490:intergenic 15.0%
!! ATTTATGAATCAACTTAAAA+AGG - tig0007210:7127-7146 Msa1345490:intron 15.0%
!!! GATTGTTTAAAATTTAAAAG+CGG + tig0007210:8595-8614 Msa1345490:intergenic 15.0%
!! ATGTATTAAAGATATTGTTT+CGG - tig0007210:9091-9110 Msa1345490:intron 15.0%
!!! TTTTTTTTTGTTGGTAATAT+CGG + tig0007210:9534-9553 Msa1345490:intergenic 15.0%
!!! CTCTATATTTTTTTTTTTGT+TGG + tig0007210:9543-9562 Msa1345490:intergenic 15.0%
!!! TCTCTATATTTAATTTTTGT+TGG + tig0007210:9632-9651 Msa1345490:intergenic 15.0%
!!! TCGATTAATTTTTTTTTTGA+GGG + tig0007210:9877-9896 Msa1345490:intergenic 15.0%
!!! ATCGATTAATTTTTTTTTTG+AGG + tig0007210:9878-9897 Msa1345490:intergenic 15.0%
!!! AGTTTTTCAATTTTTTACAT+TGG - tig0007210:10406-10425 Msa1345490:intron 15.0%
!!! TCTAAAATAATAAATTTGTC+CGG + tig0007210:10444-10463 Msa1345490:intergenic 15.0%
!!! CTAAATATACCTTTTTTTTA+AGG + tig0007210:10547-10566 Msa1345490:intergenic 15.0%
!! ATATATAGATATACATAAAC+AGG + tig0007210:11192-11211 Msa1345490:intergenic 15.0%
!! GTAATGTATATAAAATTACA+GGG - tig0007210:11227-11246 Msa1345490:intron 15.0%
!! TCAAAATTAATAATAGCACT+AGG - tig0007210:1774-1793 Msa1345490:three_prime_UTR 20.0%
!! TTATAACAAAAAAGAGTTTG+AGG - tig0007210:2291-2310 Msa1345490:intron 20.0%
!!! TTAAATTTTTGGTGCATTAA+CGG + tig0007210:2414-2433 Msa1345490:intergenic 20.0%
!!! TTGGTTATATTTGCTATTTT+AGG - tig0007210:2570-2589 Msa1345490:CDS 20.0%
!! TCCAATAACATTTAAAAATG+AGG - tig0007210:2694-2713 Msa1345490:intron 20.0%
!!! TCCTCATTTTTAAATGTTAT+TGG + tig0007210:2698-2717 Msa1345490:intergenic 20.0%
!! TTTAAAAATGAGGAATACAA+CGG - tig0007210:2704-2723 Msa1345490:intron 20.0%
!!! TGGTTTTTTTGTTTGATAAA+TGG - tig0007210:2814-2833 Msa1345490:CDS 20.0%
!!! ATGATTTTATCTCATTTCAA+TGG + tig0007210:2874-2893 Msa1345490:intergenic 20.0%
!!! TGAAAAGAATATTATGGTTT+TGG + tig0007210:2961-2980 Msa1345490:intergenic 20.0%
!! ACAACATGAAAAGAATATTA+TGG + tig0007210:2967-2986 Msa1345490:intergenic 20.0%
!!! AGAAACAATATTCTTTTTAG+CGG + tig0007210:3019-3038 Msa1345490:intergenic 20.0%
!! TTGTCTTTAAATGTATATAG+TGG - tig0007210:3679-3698 Msa1345490:intron 20.0%
!!! ACTTCATTTGAGATAAATTT+TGG + tig0007210:3717-3736 Msa1345490:intergenic 20.0%
!! AAATTTCTTGAACGATAATT+GGG + tig0007210:3776-3795 Msa1345490:intergenic 20.0%
!! ATACAGTAAAAAATAAAAGC+AGG - tig0007210:3986-4005 Msa1345490:intron 20.0%
!! TTTGTCAACAAAAAAAAAGA+TGG + tig0007210:4176-4195 Msa1345490:intergenic 20.0%
!! TGAAAAATTAGGAATGAAAA+TGG - tig0007210:4252-4271 Msa1345490:intron 20.0%
!! ATTTAGCCAACAAAATAAAA+AGG - tig0007210:4541-4560 Msa1345490:intron 20.0%
!!! GACTTTTTTTTATAAAGACT+GGG + tig0007210:4701-4720 Msa1345490:intergenic 20.0%
!!! TGACTTTTTTTTATAAAGAC+TGG + tig0007210:4702-4721 Msa1345490:intergenic 20.0%
!! CATTAACAAGAAAAACTAAA+TGG - tig0007210:4829-4848 Msa1345490:intron 20.0%
!! TGTTGAAAAATTAATGTATG+TGG - tig0007210:6340-6359 Msa1345490:intron 20.0%
!! ACAAAAATGTTAGTTAAAAG+TGG + tig0007210:6378-6397 Msa1345490:intergenic 20.0%
!!! GATTAAAATCCTTTTTATTC+AGG - tig0007210:6470-6489 Msa1345490:intron 20.0%
!!! TTTATTTGTTGAATTCTGAA+TGG - tig0007210:6680-6699 Msa1345490:CDS 20.0%
!!! TTCTAGACAAAATACATTTT+GGG + tig0007210:6785-6804 Msa1345490:intergenic 20.0%
!! TGTATTTGATATGATTTGAT+TGG + tig0007210:7089-7108 Msa1345490:intergenic 20.0%
!! AAATTAAATCCTATAGCAAA+TGG - tig0007210:7212-7231 Msa1345490:intron 20.0%
!!! GCAATTTTGATATCTTATTT+TGG - tig0007210:7273-7292 Msa1345490:intron 20.0%
!!! TTTGGTCTCATATTTTTTTT+TGG - tig0007210:7308-7327 Msa1345490:intron 20.0%
!!! ATATTTTTTTTTGGCACAAA+AGG - tig0007210:7317-7336 Msa1345490:intron 20.0%
!!! GATCAATTTCTTTGAAATTA+TGG + tig0007210:7372-7391 Msa1345490:intergenic 20.0%
!! ATACAAACTCAAAATAAGAT+CGG - tig0007210:7517-7536 Msa1345490:intron 20.0%
!! TTTATTGATGAAATTGATTG+AGG - tig0007210:7754-7773 Msa1345490:intron 20.0%
!!! TTTAAAAAGTGCTTTTCAAT+AGG + tig0007210:7807-7826 Msa1345490:intergenic 20.0%
!!! AAATGATTTTTTAGACACAA+TGG - tig0007210:7873-7892 Msa1345490:intron 20.0%
!!! TATATTGAATTTTTCCTAAG+TGG - tig0007210:8020-8039 Msa1345490:intron 20.0%
!!! ATATTGAATTTTTCCTAAGT+GGG - tig0007210:8021-8040 Msa1345490:intron 20.0%
!!! TAATACTGAAATGGATTTAT+AGG + tig0007210:8411-8430 Msa1345490:intergenic 20.0%
!! ATAAATCCATTTCAGTATTA+TGG - tig0007210:8411-8430 Msa1345490:intron 20.0%
!! AATATTCCATAGACTAAAAT+GGG + tig0007210:8444-8463 Msa1345490:intergenic 20.0%
!! AAAAAAATGAGGGAAAATTA+TGG + tig0007210:8522-8541 Msa1345490:intergenic 20.0%
!!! TTTTAAACAATCACAATGAT+TGG - tig0007210:8603-8622 Msa1345490:intron 20.0%
!!! ATTTTTTGTCCTTTGTAAAA+AGG + tig0007210:9192-9211 Msa1345490:intergenic 20.0%
!!! GTTTTAAAATATTACACAAG+CGG + tig0007210:9508-9527 Msa1345490:intergenic 20.0%
!!! CGATTAATTTTTTTTTTGAG+GGG + tig0007210:9876-9895 Msa1345490:intergenic 20.0%
!! CTCTATAAATTAATAATGTC+AGG - tig0007210:10018-10037 Msa1345490:intron 20.0%
!! TAAATTAATAATGTCAGGAT+CGG - tig0007210:10023-10042 Msa1345490:intron 20.0%
!! GGTATATTTCCTTAAAAAAA+AGG - tig0007210:10535-10554 Msa1345490:intron 20.0%
!! CGTAATGTATATAAAATTAC+AGG - tig0007210:11226-11245 Msa1345490:intron 20.0%
!!! TCCAAGAGTATATATATAAA+GGG - tig0007210:11610-11629 Msa1345490:CDS 20.0%
!! ATGAAAAATCACATATACAA+TGG + tig0007210:11710-11729 Msa1345490:intergenic 20.0%
!!! GTGCTATTATTAATTTTGAG+TGG + tig0007210:1773-1792 Msa1345490:intergenic 25.0%
!! GAAAACAAGAAACTCTAAAA+TGG - tig0007210:1837-1856 Msa1345490:three_prime_UTR 25.0%
!! TGGATGAATTTTGTAACAAT+AGG + tig0007210:1951-1970 Msa1345490:intergenic 25.0%
!! AGGAAGGAATTTTACAATAT+TGG + tig0007210:2001-2020 Msa1345490:intergenic 25.0%
! AATATTGTAAAATTCCTTCC+TGG - tig0007210:2000-2019 Msa1345490:three_prime_UTR 25.0%
! ATAGTTCTTACCTATTTCAA+AGG + tig0007210:2208-2227 Msa1345490:intergenic 25.0%
!!! GGTTTGTTAGAATTAGTTTA+AGG - tig0007210:2312-2331 Msa1345490:intron 25.0%
!! TTAAAGATAAGTATTGTTGC+AGG - tig0007210:2671-2690 Msa1345490:intron 25.0%
! TTAAAAATGAGGAATACAAC+GGG - tig0007210:2705-2724 Msa1345490:intron 25.0%
! TGTTGAATCTATACTTTATG+TGG - tig0007210:2794-2813 Msa1345490:CDS 25.0%
!! AGCTTATTGATTAGAGTATA+AGG - tig0007210:2837-2856 Msa1345490:intron 25.0%
!! GCTTATTGATTAGAGTATAA+GGG - tig0007210:2838-2857 Msa1345490:intron 25.0%
! GAGACAATACATAATATGTA+AGG - tig0007210:3080-3099 Msa1345490:intron 25.0%
! TACATAATATGTAAGGTATG+AGG - tig0007210:3087-3106 Msa1345490:intron 25.0%
!!! ACTTTTTTTTTTTGTGGCTA+AGG + tig0007210:3119-3138 Msa1345490:intergenic 25.0%
!!! TGTCTCACTTTTTTTTTTTG+TGG + tig0007210:3125-3144 Msa1345490:intergenic 25.0%
!!! TTTAGGTTTTTTCCTTTCAT+TGG - tig0007210:3151-3170 Msa1345490:intron 25.0%
! ATTTGGAAGGATATTTATCA+TGG + tig0007210:3237-3256 Msa1345490:intergenic 25.0%
! TAAAGTTAAGGAAATTTGGA+AGG + tig0007210:3250-3269 Msa1345490:intergenic 25.0%
!! TAATGACGTTACTTTATCAA+AGG - tig0007210:3347-3366 Msa1345490:intron 25.0%
!!! TTATTAAATTTATGGTGGAC+AGG - tig0007210:3443-3462 Msa1345490:intron 25.0%
! TCTTTAATTCCAAACTCAAA+TGG + tig0007210:3648-3667 Msa1345490:intergenic 25.0%
! GAAATTTCTTGAACGATAAT+TGG + tig0007210:3777-3796 Msa1345490:intergenic 25.0%
! ATCGTTCAAGAAATTTCATA+TGG - tig0007210:3780-3799 Msa1345490:intron 25.0%
! AATGAAAATGGATATCCTTT+AGG - tig0007210:4264-4283 Msa1345490:intron 25.0%
!! TTTTTATTAACGTGGACTTA+AGG + tig0007210:4310-4329 Msa1345490:intergenic 25.0%
!! TTTTGTTAAAGTGTGGAAAA+TGG + tig0007210:4420-4439 Msa1345490:intergenic 25.0%
!!! ACTATCAATGTTTTAAAACC+CGG - tig0007210:4590-4609 Msa1345490:intron 25.0%
! CTTCAAAAAAAAAAGGCAAA+CGG - tig0007210:5070-5089 Msa1345490:intron 25.0%
!! TTTCTTAGATGGAATTTGTT+AGG - tig0007210:5121-5140 Msa1345490:intron 25.0%
! TTCAAAATAAAAAAGGCAAG+CGG - tig0007210:5354-5373 Msa1345490:CDS 25.0%
!!! GTGCAATGCATTTTTTTAAA+TGG - tig0007210:5394-5413 Msa1345490:CDS 25.0%
! TGTTGCTCAAAATAATTCTA+GGG + tig0007210:6181-6200 Msa1345490:intergenic 25.0%
! ATGTTGCTCAAAATAATTCT+AGG + tig0007210:6182-6201 Msa1345490:intergenic 25.0%
! AAATTTATCTACTCTCTCTA+AGG + tig0007210:6406-6425 Msa1345490:intergenic 25.0%
! AGAGAGTAGATAAATTTAAG+AGG - tig0007210:6409-6428 Msa1345490:intron 25.0%
! GAGAGTAGATAAATTTAAGA+GGG - tig0007210:6410-6429 Msa1345490:intron 25.0%
! ATATGTATCCCTGAATAAAA+AGG + tig0007210:6482-6501 Msa1345490:intergenic 25.0%
! TTTATTCAGGGATACATATT+AGG - tig0007210:6483-6502 Msa1345490:intron 25.0%
! TACAGAATAGCATTTAATCA+TGG - tig0007210:6540-6559 Msa1345490:intron 25.0%
!! TCTAGACAAAATACATTTTG+GGG + tig0007210:6784-6803 Msa1345490:intergenic 25.0%
!! CTTCTAGACAAAATACATTT+TGG + tig0007210:6786-6805 Msa1345490:intergenic 25.0%
! AATTGTGCAATTAGACATAT+GGG + tig0007210:7344-7363 Msa1345490:intergenic 25.0%
! AAATTGTGCAATTAGACATA+TGG + tig0007210:7345-7364 Msa1345490:intergenic 25.0%
!! TATGTCTAATTGCACAATTT+TGG - tig0007210:7345-7364 Msa1345490:intron 25.0%
! AATAGGATGATCAAAATCAA+GGG + tig0007210:7397-7416 Msa1345490:intergenic 25.0%
! AAATAGGATGATCAAAATCA+AGG + tig0007210:7398-7417 Msa1345490:intergenic 25.0%
! TTATTGTCACACTATCAAAT+AGG + tig0007210:7414-7433 Msa1345490:intergenic 25.0%
!!! AGTTTCTGAAGTTCATATTT+TGG - tig0007210:8080-8099 Msa1345490:intron 25.0%
! TAAGAGAAGAAGTAAAGATA+GGG + tig0007210:8182-8201 Msa1345490:intergenic 25.0%
! TTTAAGCCATAATACTGAAA+TGG + tig0007210:8420-8439 Msa1345490:intergenic 25.0%
!!! TTAAATCCCATTTTAGTCTA+TGG - tig0007210:8435-8454 Msa1345490:intron 25.0%
! CAATATTCCATAGACTAAAA+TGG + tig0007210:8445-8464 Msa1345490:intergenic 25.0%
! ACGATATTTGAGGAAATTAA+TGG + tig0007210:8551-8570 Msa1345490:intergenic 25.0%
!! TGTTTAAAATTTAAAAGCGG+AGG + tig0007210:8592-8611 Msa1345490:intergenic 25.0%
! TTACTTCTATCAATTAACCA+TGG - tig0007210:8805-8824 Msa1345490:intron 25.0%
!!! CACAACATTTTAAGATTCAA+AGG - tig0007210:8919-8938 Msa1345490:intron 25.0%
!!! ACATTTTAAGATTCAAAGGT+AGG - tig0007210:8923-8942 Msa1345490:intron 25.0%
!!! CATTTTAAGATTCAAAGGTA+GGG - tig0007210:8924-8943 Msa1345490:intron 25.0%
!!! ATTTTAAGATTCAAAGGTAG+GGG - tig0007210:8925-8944 Msa1345490:intron 25.0%
! TACAAAGGACAAAAAATGTA+AGG - tig0007210:9195-9214 Msa1345490:intron 25.0%
! ACAAAGGACAAAAAATGTAA+GGG - tig0007210:9196-9215 Msa1345490:intron 25.0%
!! TTTAAAATATTACACAAGCG+CGG + tig0007210:9506-9525 Msa1345490:intergenic 25.0%
! TGAAGTAAGTACTACTATAA+AGG - tig0007210:9676-9695 Msa1345490:intron 25.0%
! TTTGCATAAATTATAGTCGT+TGG + tig0007210:9820-9839 Msa1345490:intergenic 25.0%
! TTTGTACATACCAAACAAAA+AGG - tig0007210:10125-10144 Msa1345490:intron 25.0%
! GTTATCGTTCATTAATATAC+AGG - tig0007210:10738-10757 Msa1345490:CDS 25.0%
! AAATCGCACAACTAATTATT+TGG + tig0007210:10850-10869 Msa1345490:intergenic 25.0%
!! AAGACAATTTTTGTTAACAG+TGG - tig0007210:10879-10898 Msa1345490:intron 25.0%
!! AGACAATTTTTGTTAACAGT+GGG - tig0007210:10880-10899 Msa1345490:intron 25.0%
! ATATTCTTGATAGATACACA+AGG - tig0007210:11090-11109 Msa1345490:intron 25.0%
! ATGTATATAAAATTACAGGG+AGG - tig0007210:11230-11249 Msa1345490:intron 25.0%
! CATTAATTAATTCCTAGAGT+GGG + tig0007210:11325-11344 Msa1345490:intergenic 25.0%
! TAATTCTCTTTATGGCATAT+TGG - tig0007210:11523-11542 Msa1345490:CDS 25.0%
!! CTCCAAGAGTATATATATAA+AGG - tig0007210:11609-11628 Msa1345490:CDS 25.0%
! TCCCTTTATATATATACTCT+TGG + tig0007210:11614-11633 Msa1345490:intergenic 25.0%
! TATATATATAAAGGGAACCA+GGG - tig0007210:11618-11637 Msa1345490:CDS 25.0%
! AATCACATATACAATGGTAT+GGG + tig0007210:11704-11723 Msa1345490:intergenic 25.0%
! AAATCACATATACAATGGTA+TGG + tig0007210:11705-11724 Msa1345490:intergenic 25.0%
! TAGGTTTTCAGATAAGAACA+GGG - tig0007210:1793-1812 Msa1345490:three_prime_UTR 30.0%
ATTGAGATGTTGCAAAAACA+AGG + tig0007210:1978-1997 Msa1345490:intergenic 30.0%
AAAATAGTAGAACAATTCCG+CGG + tig0007210:2100-2119 Msa1345490:intergenic 30.0%
ACATTCGATGGAAAAACATT+GGG + tig0007210:2248-2267 Msa1345490:intergenic 30.0%
!! TATTCTTTTTAGCGGAAAAG+TGG + tig0007210:3011-3030 Msa1345490:intergenic 30.0%
AACTTCTTGGAATATTTGGT+TGG + tig0007210:3044-3063 Msa1345490:intergenic 30.0%
CAGTAACTTCTTGGAATATT+TGG + tig0007210:3048-3067 Msa1345490:intergenic 30.0%
CAAATATTCCAAGAAGTTAC+TGG - tig0007210:3046-3065 Msa1345490:intron 30.0%
AAATATGACCAGTAACTTCT+TGG + tig0007210:3057-3076 Msa1345490:intergenic 30.0%
! AAAGTGAGACACATTCTTTT+AGG - tig0007210:3134-3153 Msa1345490:intron 30.0%
GATATTTATCATGGCTCAAT+TGG + tig0007210:3228-3247 Msa1345490:intergenic 30.0%
GTGCTAAAGTTAAGGAAATT+TGG + tig0007210:3254-3273 Msa1345490:intergenic 30.0%
TTTCACTTGTGCTAAAGTTA+AGG + tig0007210:3262-3281 Msa1345490:intergenic 30.0%
TAGCACAAGTGAAAAACATA+AGG - tig0007210:3268-3287 Msa1345490:intron 30.0%
! GTTTTGTGTGTTATGTTTTG+CGG + tig0007210:3310-3329 Msa1345490:intergenic 30.0%
AAAGGTTCACTCATTTGTTT+CGG - tig0007210:3365-3384 Msa1345490:intron 30.0%
!!! TATATTTTTGGATTTGCCTG+TGG - tig0007210:3476-3495 Msa1345490:intron 30.0%
!!! ATATTTTTGGATTTGCCTGT+GGG - tig0007210:3477-3496 Msa1345490:intron 30.0%
ACAATGCTCATCAATTTCTT+AGG - tig0007210:3562-3581 Msa1345490:intron 30.0%
!! TTGATTTTGCCATTTGAGTT+TGG - tig0007210:3636-3655 Msa1345490:intron 30.0%
TAAATGTATATAGTGGCTCA+TGG - tig0007210:3686-3705 Msa1345490:intron 30.0%
CTGGTCAACAAAAATGTATT+AGG - tig0007210:3820-3839 Msa1345490:intron 30.0%
GATTATCCTCAATTTCAAGA+TGG + tig0007210:4207-4226 Msa1345490:intergenic 30.0%
AGGATAATCTTGAAATTGAC+CGG - tig0007210:4218-4237 Msa1345490:intron 30.0%
AAAATGGATATCCTTTAGGT+TGG - tig0007210:4268-4287 Msa1345490:intron 30.0%
! AAATGGATATCCTTTAGGTT+GGG - tig0007210:4269-4288 Msa1345490:intron 30.0%
! TACGGAACTTTTTATTAACG+TGG + tig0007210:4318-4337 Msa1345490:intergenic 30.0%
CAAAATTATGGACTCAGATA+CGG + tig0007210:4336-4355 Msa1345490:intergenic 30.0%
! TATCTGAGTCCATAATTTTG+TGG - tig0007210:4336-4355 Msa1345490:intron 30.0%
! ATCTGAGTCCATAATTTTGT+GGG - tig0007210:4337-4356 Msa1345490:intron 30.0%
AACTTATGCCCACAAAATTA+TGG + tig0007210:4348-4367 Msa1345490:intergenic 30.0%
ACTTAGATGTTCGTAGTATA+CGG + tig0007210:4383-4402 Msa1345490:intergenic 30.0%
TAGCATATCAATGATCTTAC+GGG + tig0007210:5039-5058 Msa1345490:intergenic 30.0%
CTAGCATATCAATGATCTTA+CGG + tig0007210:5040-5059 Msa1345490:intergenic 30.0%
AAAAAAAAAGGCAAACGGAT+AGG - tig0007210:5075-5094 Msa1345490:intron 30.0%
! GTGCAATGAATTTTCTTAGA+TGG - tig0007210:5110-5129 Msa1345490:intron 30.0%
AACCTAATAAAGCAAATGAG+CGG - tig0007210:5157-5176 Msa1345490:intron 30.0%
ATCATACGTGATCATTGATA+TGG - tig0007210:5317-5336 Msa1345490:CDS 30.0%
AACCTAATAAAGCAAATGAG+CGG - tig0007210:5157-5176 Msa1345490:intron 30.0%
! ACTGAAACGTTTATTTCTCA+CGG + tig0007210:5567-5586 Msa1345490:intergenic 30.0%
ATTATCTAACTTGGGTAAGT+GGG + tig0007210:5686-5705 Msa1345490:intergenic 30.0%
AATTATCTAACTTGGGTAAG+TGG + tig0007210:5687-5706 Msa1345490:intergenic 30.0%
!!! ATATGCAGCGTTTTAAAATC+CGG + tig0007210:5899-5918 Msa1345490:intergenic 30.0%
CTACAAAAAAATACCTACGA+TGG + tig0007210:6116-6135 Msa1345490:intergenic 30.0%
!!! CATCGTAGGTATTTTTTTGT+AGG - tig0007210:6114-6133 Msa1345490:intron 30.0%
!!! ATTTTTTTGTAGGTATCCAG+TGG - tig0007210:6124-6143 Msa1345490:intron 30.0%
!! TAATTCTAGGGTAGGAAATA+GGG + tig0007210:6169-6188 Msa1345490:intergenic 30.0%
!! ATAATTCTAGGGTAGGAAAT+AGG + tig0007210:6170-6189 Msa1345490:intergenic 30.0%
! TCAACACCTGTGTTATTAAA+GGG + tig0007210:6326-6345 Msa1345490:intergenic 30.0%
! TTCAACACCTGTGTTATTAA+AGG + tig0007210:6327-6346 Msa1345490:intergenic 30.0%
AATAGCATTTAATCATGGCA+TGG - tig0007210:6545-6564 Msa1345490:intron 30.0%
ATAGCATTTAATCATGGCAT+GGG - tig0007210:6546-6565 Msa1345490:intron 30.0%
! TATTTCTAATGAACTCTACG+AGG - tig0007210:6572-6591 Msa1345490:intron 30.0%
GAGACACAATGTTATTCATA+AGG + tig0007210:6834-6853 Msa1345490:intergenic 30.0%
! TGCTTTTGTCATTCGATTTT+CGG - tig0007210:6865-6884 Msa1345490:intron 30.0%
!! ACTATGAATCCATTTGCTAT+AGG + tig0007210:7224-7243 Msa1345490:intergenic 30.0%
AAAATATGAGACCAAAATCG+CGG + tig0007210:7304-7323 Msa1345490:intergenic 30.0%
! AGACTCTTCATTTTCATGTT+AGG + tig0007210:7446-7465 Msa1345490:intergenic 30.0%
GCTTAGAGTCTTAAAAAATG+AGG - tig0007210:7470-7489 Msa1345490:intron 30.0%
TTACGAGTGAAATCATAGAT+TGG - tig0007210:7558-7577 Msa1345490:intron 30.0%
GTAAGAGAAGAAGTAAAGAT+AGG + tig0007210:8183-8202 Msa1345490:intergenic 30.0%
TATTAGAGTTTAATGGTCGT+AGG - tig0007210:8248-8267 Msa1345490:intron 30.0%
TACAGTAATGAGACAACAAA+TGG - tig0007210:8358-8377 Msa1345490:intron 30.0%
ACAGTAATGAGACAACAAAT+GGG - tig0007210:8359-8378 Msa1345490:intron 30.0%
! TTAGCAAAAAGTGCAAAAAG+AGG + tig0007210:8491-8510 Msa1345490:intergenic 30.0%
!! TCTTTTTGCACTTTTTGCTA+AGG - tig0007210:8490-8509 Msa1345490:intron 30.0%
!! CTTTTTGCACTTTTTGCTAA+GGG - tig0007210:8491-8510 Msa1345490:intron 30.0%
!! TTTTTGCACTTTTTGCTAAG+GGG - tig0007210:8492-8511 Msa1345490:intron 30.0%
AAAATGAGGGAAAATTATGG+AGG + tig0007210:8519-8538 Msa1345490:intergenic 30.0%
ATGGTGTGGAAAAAAAATGA+GGG + tig0007210:8532-8551 Msa1345490:intergenic 30.0%
AATGGTGTGGAAAAAAAATG+AGG + tig0007210:8533-8552 Msa1345490:intergenic 30.0%
ATTTGAGGAAATTAATGGTG+TGG + tig0007210:8546-8565 Msa1345490:intergenic 30.0%
AATTACGATCACGATATTTG+AGG + tig0007210:8561-8580 Msa1345490:intergenic 30.0%
CAATCACAATGATTGGAATT+TGG - tig0007210:8610-8629 Msa1345490:intron 30.0%
ACAATTAGTTGTTAGTTAGG+AGG + tig0007210:8783-8802 Msa1345490:intergenic 30.0%
TCCTAACTAACAACTAATTG+TGG - tig0007210:8782-8801 Msa1345490:intron 30.0%
ACCACAATTAGTTGTTAGTT+AGG + tig0007210:8786-8805 Msa1345490:intergenic 30.0%
AAGTTAACGTCAAGTTAACT+AGG + tig0007210:8859-8878 Msa1345490:intergenic 30.0%
CCTAAATTCTCAAGTAATGT+GGG + tig0007210:9394-9413 Msa1345490:intergenic 30.0%
ACCTAAATTCTCAAGTAATG+TGG + tig0007210:9395-9414 Msa1345490:intergenic 30.0%
!! GCGCTTGTGTAATATTTTAA+AGG - tig0007210:9591-9610 Msa1345490:intron 30.0%
AGTACTACTATAAAGGACAT+TGG - tig0007210:9683-9702 Msa1345490:intron 30.0%
ACTATCAAGTAGTAGAATGA+AGG - tig0007210:9747-9766 Msa1345490:CDS 30.0%
GGGGAACGATTAAATATTAT+TGG + tig0007210:9857-9876 Msa1345490:intergenic 30.0%
CATTCGAAAGGTAATTACAT+TGG - tig0007210:9992-10011 Msa1345490:CDS 30.0%
!! GACTAATTTGCCTTTTTGTT+TGG + tig0007210:10138-10157 Msa1345490:intergenic 30.0%
CTAATTTACGTTGAGTTACA+AGG + tig0007210:10190-10209 Msa1345490:intergenic 30.0%
GTACAACAAATGTAAACAAG+AGG - tig0007210:10256-10275 Msa1345490:intron 30.0%
TTGGGACCGAAAATTATAAA+GGG - tig0007210:10348-10367 Msa1345490:intron 30.0%
! GGAGATCCCTTTATAATTTT+CGG + tig0007210:10357-10376 Msa1345490:intergenic 30.0%
!!! TTTTTTACATTGGCCCAAAT+CGG - tig0007210:10416-10435 Msa1345490:intron 30.0%
TACTACTGTATTTGCAATTC+AGG - tig0007210:10619-10638 Msa1345490:intron 30.0%
ACTACTGTATTTGCAATTCA+GGG - tig0007210:10620-10639 Msa1345490:intron 30.0%
CATGTAAATCTTAGCAGAAA+AGG - tig0007210:10716-10735 Msa1345490:intron 30.0%
! GACAATTTTTGTTAACAGTG+GGG - tig0007210:10881-10900 Msa1345490:intron 30.0%
! TGACATGAAAGTTCCATTTT+TGG - tig0007210:10908-10927 Msa1345490:intron 30.0%
TATTCTAATTCTCAAGTAGC+AGG - tig0007210:10990-11009 Msa1345490:intron 30.0%
ATTCTAATTCTCAAGTAGCA+GGG - tig0007210:10991-11010 Msa1345490:intron 30.0%
TATATAAAATTACAGGGAGG+AGG - tig0007210:11233-11252 Msa1345490:intron 30.0%
GCATTAATTAATTCCTAGAG+TGG + tig0007210:11326-11345 Msa1345490:intergenic 30.0%
AATATAGGAGCAAGTTCATT+TGG - tig0007210:11396-11415 Msa1345490:CDS 30.0%
!! TAGTAGAAGTGTAGAACTTT+TGG - tig0007210:11483-11502 Msa1345490:CDS 30.0%
AGCTGTCTTAATTCTCTTTA+TGG - tig0007210:11515-11534 Msa1345490:CDS 30.0%
GTATATATATAAAGGGAACC+AGG - tig0007210:11617-11636 Msa1345490:CDS 30.0%
TGTTCTTATCTGCAAACTAG+CGG + tig0007210:1722-1741 None:intergenic 35.0%
! CTAGTTTGCAGATAAGAACA+GGG - tig0007210:1722-1741 Msa1345490:three_prime_UTR 35.0%
! CTAGGTTTTCAGATAAGAAC+AGG - tig0007210:1792-1811 Msa1345490:three_prime_UTR 35.0%
!! ACTCTAAAATGGCAATGCTT+AGG - tig0007210:1848-1867 Msa1345490:three_prime_UTR 35.0%
AGATGTTGCAAAAACAAGGT+TGG + tig0007210:1974-1993 Msa1345490:intergenic 35.0%
!! AAATTCCTTCCTGGTTTTCA+AGG - tig0007210:2009-2028 Msa1345490:three_prime_UTR 35.0%
!! AGTTTCTAGTACAAAGGGAA+GGG + tig0007210:2037-2056 Msa1345490:intergenic 35.0%
TTCCCTTTGTACTAGAAACT+GGG - tig0007210:2037-2056 Msa1345490:three_prime_UTR 35.0%
!! TACCCAGTTTCTAGTACAAA+GGG + tig0007210:2042-2061 Msa1345490:intergenic 35.0%
TCTTACCTATTTCAAAGGCA+AGG + tig0007210:2203-2222 Msa1345490:intergenic 35.0%
CACATTCGATGGAAAAACAT+TGG + tig0007210:2249-2268 Msa1345490:intergenic 35.0%
!!! CTTTTGACTTTCTTAACCAG+TGG - tig0007210:2466-2485 Msa1345490:intron 35.0%
AAACTAAAGGACATGCTAAC+CGG + tig0007210:2501-2520 Msa1345490:intergenic 35.0%
!! CGTTCTGACTTGTTAATAGT+TGG - tig0007210:2551-2570 Msa1345490:CDS 35.0%
AAACAAAGATAAGCACTCAC+AGG - tig0007210:2631-2650 Msa1345490:intron 35.0%
GCTTACCAAATTTGATCTTG+AGG - tig0007210:2729-2748 Msa1345490:intron 35.0%
TACATTTGACGACATTGCAA+TGG - tig0007210:2893-2912 Msa1345490:intron 35.0%
AAAAGTGGTGAATTTGAAGG+AGG + tig0007210:2996-3015 Msa1345490:intergenic 35.0%
AATTGGTATCCAACATGTTG+GGG + tig0007210:3211-3230 Msa1345490:intergenic 35.0%
CAATTGGTATCCAACATGTT+GGG + tig0007210:3212-3231 Msa1345490:intergenic 35.0%
TCAATTGGTATCCAACATGT+TGG + tig0007210:3213-3232 Msa1345490:intergenic 35.0%
! TGTGTTATGTTTTGCGGAAA+TGG + tig0007210:3304-3323 Msa1345490:intergenic 35.0%
TGCTCATCAATTTCTTAGGA+AGG - tig0007210:3566-3585 Msa1345490:intron 35.0%
TCAAATGAAGTGTACATTGC+TGG - tig0007210:3726-3745 Msa1345490:intron 35.0%
TTCTTGAACGATAATTGGGA+CGG + tig0007210:3772-3791 Msa1345490:intergenic 35.0%
CCTGCAAGAAAGGAAATTTA+TGG + tig0007210:4083-4102 Msa1345490:intergenic 35.0%
CCATAAATTTCCTTTCTTGC+AGG - tig0007210:4080-4099 Msa1345490:intron 35.0%
!!! TTGTTTTAAATGTGCGAACC+TGG + tig0007210:4139-4158 Msa1345490:intergenic 35.0%
TCTTTGCCATCTTGAAATTG+AGG - tig0007210:4198-4217 Msa1345490:intron 35.0%
GGATAATCTTGAAATTGACC+GGG - tig0007210:4219-4238 Msa1345490:intron 35.0%
TTAGATGTTCGTAGTATACG+GGG + tig0007210:4381-4400 Msa1345490:intergenic 35.0%
CTTAGATGTTCGTAGTATAC+GGG + tig0007210:4382-4401 Msa1345490:intergenic 35.0%
! TAAAGTGTGGAAAATGGACT+CGG + tig0007210:4414-4433 Msa1345490:intergenic 35.0%
CAAACGGATAGGAATGAAAT+TGG - tig0007210:5086-5105 Msa1345490:intron 35.0%
ACCTAATAAAGCAAATGAGC+GGG - tig0007210:5158-5177 Msa1345490:intron 35.0%
CAAATGAGCGGGAAAAAATT+AGG - tig0007210:5169-5188 Msa1345490:intron 35.0%
AATAAAAAAGGCAAGCGGAT+AGG - tig0007210:5359-5378 Msa1345490:CDS 35.0%
ACCTAATAAAGCAAATGAGC+GGG - tig0007210:5158-5177 Msa1345490:intron 35.0%
CAAATGAGCGGGAAAAAATT+AGG - tig0007210:5169-5188 Msa1345490:intron 35.0%
! TGAAACGTTTATTTCTCACG+GGG + tig0007210:5565-5584 Msa1345490:intergenic 35.0%
! CTGAAACGTTTATTTCTCAC+GGG + tig0007210:5566-5585 Msa1345490:intergenic 35.0%
! TAATCATTTAGAATCCGGTC+CGG - tig0007210:5717-5736 Msa1345490:intron 35.0%
!! TAATTACCCGCCATTTTGAA+CGG + tig0007210:6051-6070 Msa1345490:intergenic 35.0%
ACATTGTTGGGTATGAGATT+GGG + tig0007210:6080-6099 Msa1345490:intergenic 35.0%
AAAAAATACCTACGATGGAC+AGG + tig0007210:6111-6130 Msa1345490:intergenic 35.0%
TAGGAAATAGGGATGTCAAT+TGG + tig0007210:6158-6177 Msa1345490:intergenic 35.0%
!! GCTCAAAATAATTCTAGGGT+AGG + tig0007210:6177-6196 Msa1345490:intergenic 35.0%
TTGTTGCCCTTTAATAACAC+AGG - tig0007210:6317-6336 Msa1345490:intron 35.0%
TATTAGGAAATCCCGTAACT+TGG - tig0007210:6499-6518 Msa1345490:intron 35.0%
TCATTGCAAAAGAACTGTAG+AGG - tig0007210:6739-6758 Msa1345490:intron 35.0%
! TTTGTCATTCGATTTTCGGA+CGG - tig0007210:6869-6888 Msa1345490:intron 35.0%
! GTAATGCTGTTTGCTGAAAT+TGG - tig0007210:7702-7721 Msa1345490:intron 35.0%
AGGTAACTCATCAAAACTGT+TGG - tig0007210:7774-7793 Msa1345490:intron 35.0%
AGAAGAAGTAAAGATAGGGT+TGG + tig0007210:8178-8197 Msa1345490:intergenic 35.0%
TAGAGCTTAAACTCCATTGA+TGG - tig0007210:8654-8673 Msa1345490:intron 35.0%
! AAGTTTTCTTCCTCCATCAA+TGG + tig0007210:8670-8689 Msa1345490:intergenic 35.0%
GTTGTTAGTTAGGAGGATAT+AGG + tig0007210:8776-8795 Msa1345490:intergenic 35.0%
TTTCTCCCATTTGCAATGAA+GGG + tig0007210:8967-8986 Msa1345490:intergenic 35.0%
! TTTTCTCCCATTTGCAATGA+AGG + tig0007210:8968-8987 Msa1345490:intergenic 35.0%
TAAAAAGGATCTCGTTGGAT+TGG + tig0007210:9177-9196 Msa1345490:intergenic 35.0%
CTTTGTAAAAAGGATCTCGT+TGG + tig0007210:9182-9201 Msa1345490:intergenic 35.0%
! CAACGAGATCCTTTTTACAA+AGG - tig0007210:9180-9199 Msa1345490:intron 35.0%
TCTCAGAAACGTAATAGATG+CGG - tig0007210:9246-9265 Msa1345490:intron 35.0%
CCCACATTACTTGAGAATTT+AGG - tig0007210:9391-9410 Msa1345490:intron 35.0%
AGAACTTTGTGCGTAACAAA+TGG - tig0007210:9649-9668 Msa1345490:intron 35.0%
TGTATCATTCCACTATCAAG+TGG - tig0007210:9708-9727 Msa1345490:CDS 35.0%
TCAAGTAGTAGAATGAAGGA+TGG - tig0007210:9751-9770 Msa1345490:CDS 35.0%
CAAGTAGTAGAATGAAGGAT+GGG - tig0007210:9752-9771 Msa1345490:CDS 35.0%
CTTGGGACCGAAAATTATAA+AGG - tig0007210:10347-10366 Msa1345490:intron 35.0%
! TTTTTACATTGGCCCAAATC+GGG - tig0007210:10417-10436 Msa1345490:intron 35.0%
! TTTGCAATTCAGGGAAGTAT+AGG - tig0007210:10629-10648 Msa1345490:intron 35.0%
! TTCAGGGAAGTATAGGAAAA+TGG - tig0007210:10636-10655 Msa1345490:intron 35.0%
!! ACTATTCCATCGTTGATGAT+TGG - tig0007210:10958-10977 Msa1345490:intron 35.0%
ACACAAGGACTTACTCAAAT+CGG - tig0007210:11105-11124 Msa1345490:intron 35.0%
GATATCTAATTACCCACTCT+AGG - tig0007210:11310-11329 Msa1345490:CDS 35.0%
GTTATATCGTGAGAAGAAAG+TGG + tig0007210:11440-11459 Msa1345490:intergenic 35.0%
TACACTTCTACTAGTGTCAT+AGG + tig0007210:11476-11495 Msa1345490:intergenic 35.0%
!! TAGAAGTGTAGAACTTTTGG+TGG - tig0007210:11486-11505 Msa1345490:CDS 35.0%
! GCTAGTTTGCAGATAAGAAC+AGG - tig0007210:1721-1740 Msa1345490:three_prime_UTR 40.0%
ATAAGAACAGGGAAGAGAAG+TGG - tig0007210:1804-1823 Msa1345490:three_prime_UTR 40.0%
TGTTGCAAAAACAAGGTTGG+TGG + tig0007210:1971-1990 Msa1345490:intergenic 40.0%
!! GTTTCTAGTACAAAGGGAAG+GGG + tig0007210:2036-2055 Msa1345490:intergenic 40.0%
!! CAGTTTCTAGTACAAAGGGA+AGG + tig0007210:2038-2057 Msa1345490:intergenic 40.0%
CTTCCCTTTGTACTAGAAAC+TGG - tig0007210:2036-2055 Msa1345490:three_prime_UTR 40.0%
!! GTACCCAGTTTCTAGTACAA+AGG + tig0007210:2043-2062 Msa1345490:intergenic 40.0%
TGAAACAGATGAAATTGCCG+CGG - tig0007210:2080-2099 Msa1345490:three_prime_UTR 40.0%
! AGCAAGAGAGGATCTTGTTT+AGG + tig0007210:2141-2160 Msa1345490:intergenic 40.0%
AACAAGATCCTCTCTTGCTT+TGG - tig0007210:2142-2161 Msa1345490:three_prime_UTR 40.0%
TATCTCTAGCACACATTCGA+TGG + tig0007210:2260-2279 Msa1345490:intergenic 40.0%
!! GTCTCTCAAGCTTTAGATAC+TGG - tig0007210:2350-2369 Msa1345490:CDS 40.0%
TGTGGCCTCAAGATCAAATT+TGG + tig0007210:2737-2756 Msa1345490:intergenic 40.0%
TCAACCTTTGTCCATGAATG+TGG + tig0007210:2755-2774 Msa1345490:intergenic 40.0%
CGGAAAAGTGGTGAATTTGA+AGG + tig0007210:2999-3018 Msa1345490:intergenic 40.0%
! AGGTTTGCTCTTCCAATGAA+AGG + tig0007210:3166-3185 Msa1345490:intergenic 40.0%
! TGAGCAGCACTTTCTGTTTT+GGG + tig0007210:3519-3538 Msa1345490:intergenic 40.0%
TCTTGAACGATAATTGGGAC+GGG + tig0007210:3771-3790 Msa1345490:intergenic 40.0%
TCCTTTCTTGCAGGAAATGA+AGG - tig0007210:4089-4108 Msa1345490:intron 40.0%
ACCTTCATTTCCTGCAAGAA+AGG + tig0007210:4093-4112 Msa1345490:intergenic 40.0%
TTTCTTGCAGGAAATGAAGG+TGG - tig0007210:4092-4111 Msa1345490:intron 40.0%
! TTTTAAATGTGCGAACCTGG+AGG + tig0007210:4136-4155 Msa1345490:intergenic 40.0%
!!! CAATGTTTTAAAACCCGGAC+CGG - tig0007210:4595-4614 Msa1345490:intron 40.0%
! TCCCGCTCATTTGCTTTATT+AGG + tig0007210:5162-5181 Msa1345490:intergenic 40.0%
CAAGCGGATAGGAATGAAAT+TGG - tig0007210:5370-5389 Msa1345490:CDS 40.0%
! TCCCGCTCATTTGCTTTATT+AGG + tig0007210:5162-5181 Msa1345490:intergenic 40.0%
! GAAACGTTTATTTCTCACGG+GGG + tig0007210:5564-5583 Msa1345490:intergenic 40.0%
AGCAAGTTCACAAAGTCAAG+TGG - tig0007210:5619-5638 Msa1345490:intron 40.0%
AATATTGTGCTGCATGTACC+CGG - tig0007210:5653-5672 Msa1345490:intron 40.0%
!! AATTACCCGCCATTTTGAAC+GGG + tig0007210:6050-6069 Msa1345490:intergenic 40.0%
CACATTGTTGGGTATGAGAT+TGG + tig0007210:6081-6100 Msa1345490:intergenic 40.0%
CAATCTCATACCCAACAATG+TGG - tig0007210:6079-6098 Msa1345490:intron 40.0%
CAGGCAAATACCACATTGTT+GGG + tig0007210:6092-6111 Msa1345490:intergenic 40.0%
ACAGGCAAATACCACATTGT+TGG + tig0007210:6093-6112 Msa1345490:intergenic 40.0%
TCAATTGGACTCAAATCCAC+TGG + tig0007210:6143-6162 Msa1345490:intergenic 40.0%
CTGTAATTATCATCGTGAGC+TGG + tig0007210:6525-6544 Msa1345490:intergenic 40.0%
CATAAGGCTTACCTCTTGAT+AGG + tig0007210:6818-6837 Msa1345490:intergenic 40.0%
! TTTTGGTCAAACCGCGATTT+TGG - tig0007210:7290-7309 Msa1345490:intron 40.0%
GAAACTCCTGAAATAGTCTG+CGG + tig0007210:8066-8085 Msa1345490:intergenic 40.0%
!! GTTTGGTTTGCCTAATCCAA+TGG - tig0007210:8116-8135 Msa1345490:intron 40.0%
GAGGAGACTTCTTATTCACA+AGG - tig0007210:8152-8171 Msa1345490:intron 40.0%
CATTGCCACCTTTATACTGT+CGG - tig0007210:8202-8221 Msa1345490:intron 40.0%
ATTGCCACCTTTATACTGTC+GGG - tig0007210:8203-8222 Msa1345490:intron 40.0%
GAAGTTACCCGACAGTATAA+AGG + tig0007210:8213-8232 Msa1345490:intergenic 40.0%
AGCTTAAACTCCATTGATGG+AGG - tig0007210:8657-8676 Msa1345490:intron 40.0%
GATGGAGGAAGAAAACTTGA+AGG - tig0007210:8672-8691 Msa1345490:intron 40.0%
TCAAAGGTAGGGGAAAATCA+TGG - tig0007210:8935-8954 Msa1345490:intron 40.0%
ATACGTCCCTTCATTGCAAA+TGG - tig0007210:8958-8977 Msa1345490:intron 40.0%
TACGTCCCTTCATTGCAAAT+GGG - tig0007210:8959-8978 Msa1345490:intron 40.0%
!! TTCTGAGATATTACCCGCTT+TGG + tig0007210:9234-9253 Msa1345490:intergenic 40.0%
GAACATTGGATCACTAGGTA+GGG - tig0007210:9280-9299 Msa1345490:intron 40.0%
AACATTGGATCACTAGGTAG+GGG - tig0007210:9281-9300 Msa1345490:intron 40.0%
TCCTCGAAAATACAGTGTTG+TGG - tig0007210:9433-9452 Msa1345490:intron 40.0%
CCTCGAAAATACAGTGTTGT+GGG - tig0007210:9434-9453 Msa1345490:intron 40.0%
CAGACTCATGCATATTTCCT+CGG - tig0007210:9927-9946 Msa1345490:CDS 40.0%
!! ATATTTCCTCGGTGCCTATT+GGG - tig0007210:9938-9957 Msa1345490:CDS 40.0%
!! ATTCCATCGTTGATGATTGG+AGG - tig0007210:10961-10980 Msa1345490:intron 40.0%
GATGACATTTGCAACTGTGA+AGG - tig0007210:11127-11146 Msa1345490:intron 40.0%
CATTCTTCACGTTTGTACTC+GGG + tig0007210:11269-11288 Msa1345490:intergenic 40.0%
GCATTCTTCACGTTTGTACT+CGG + tig0007210:11270-11289 Msa1345490:intergenic 40.0%
AATGCTTAGCCATGTTCAGT+AGG - tig0007210:11285-11304 Msa1345490:CDS 40.0%
AGATATCCACCTACTGAACA+TGG + tig0007210:11297-11316 Msa1345490:intergenic 40.0%
TCATCATGTTGAACTCAGCT+TGG + tig0007210:11350-11369 Msa1345490:intergenic 40.0%
TAGTGTCATAGGCTAGGAAT+AGG + tig0007210:11465-11484 Msa1345490:intergenic 40.0%
TTCTACTAGTGTCATAGGCT+AGG + tig0007210:11471-11490 Msa1345490:intergenic 40.0%
CTACAAGTCGTGTGAAATTG+CGG - tig0007210:11555-11574 Msa1345490:CDS 40.0%
AGGCATAGTTCACATCACAG+TGG - tig0007210:1868-1887 Msa1345490:three_prime_UTR 45.0%
TGTACTAGAAACTGGGTACG+TGG - tig0007210:2044-2063 Msa1345490:three_prime_UTR 45.0%
GTACTAGAAACTGGGTACGT+GGG - tig0007210:2045-2064 Msa1345490:three_prime_UTR 45.0%
CCTCTCTTGCTTTGGTTAAC+CGG - tig0007210:2150-2169 Msa1345490:exon 45.0%
!! TCTGGCCTTGCCTTTGAAAT+AGG - tig0007210:2195-2214 Msa1345490:CDS 45.0%
TGATCTTGAGGCCACATTCA+TGG - tig0007210:2741-2760 Msa1345490:CDS 45.0%
AGGAAGGGGGAAAGTTCTTA+AGG + tig0007210:3186-3205 Msa1345490:intergenic 45.0%
TAAGAGAATCCAGTACCCAC+AGG + tig0007210:3495-3514 Msa1345490:intergenic 45.0%
! CTGAGCAGCACTTTCTGTTT+TGG + tig0007210:3520-3539 Msa1345490:intergenic 45.0%
ATTGCTGGTGACTCATACTC+AGG - tig0007210:3741-3760 Msa1345490:intron 45.0%
TTGACCAGTCATTGTGAGCA+TGG + tig0007210:3808-3827 Msa1345490:intergenic 45.0%
CGCTATAGTACCCAACCTAA+AGG + tig0007210:4282-4301 Msa1345490:intergenic 45.0%
AGACTGGGTCAATAGTCATG+CGG + tig0007210:4686-4705 Msa1345490:intergenic 45.0%
GGTTGTTCAGCTAAGCAGAT+CGG + tig0007210:5826-5845 Msa1345490:intergenic 45.0%
!!! TTTTAAAATCCGGACCGACC+CGG + tig0007210:5889-5908 Msa1345490:intergenic 45.0%
! ATTTTGAACGGGTATGTGCG+CGG + tig0007210:6039-6058 Msa1345490:intergenic 45.0%
CACATACCCGTTCAAAATGG+CGG - tig0007210:6041-6060 Msa1345490:intron 45.0%
ACATACCCGTTCAAAATGGC+GGG - tig0007210:6042-6061 Msa1345490:intron 45.0%
AGACATCCAGTCCTATCAAG+AGG - tig0007210:6804-6823 Msa1345490:intron 45.0%
CAATAGGCAATAGCCCACTT+AGG + tig0007210:8037-8056 Msa1345490:intergenic 45.0%
TAGTCTGCGGACACAACAAT+AGG + tig0007210:8053-8072 Msa1345490:intergenic 45.0%
TTGTGTCCGCAGACTATTTC+AGG - tig0007210:8057-8076 Msa1345490:intron 45.0%
TTGGAACCGAAATGCGAGTT+TGG - tig0007210:8099-8118 Msa1345490:intron 45.0%
GGCAAACCAAACTCGCATTT+CGG + tig0007210:8108-8127 Msa1345490:intergenic 45.0%
!! CCATTGGCTTCCATTGGATT+AGG + tig0007210:8129-8148 Msa1345490:intergenic 45.0%
CCTAATCCAATGGAAGCCAA+TGG - tig0007210:8126-8145 Msa1345490:intron 45.0%
ATCCAATGGAAGCCAATGGT+AGG - tig0007210:8130-8149 Msa1345490:intron 45.0%
AAGAAGTCTCCTCCTACCAT+TGG + tig0007210:8145-8164 Msa1345490:intergenic 45.0%
GTTACCCGACAGTATAAAGG+TGG + tig0007210:8210-8229 Msa1345490:intergenic 45.0%
! TTGTAACTGCTGGCTAACCA+TGG + tig0007210:8825-8844 Msa1345490:intergenic 45.0%
CCTTAACCACTTGTAACTGC+TGG + tig0007210:8835-8854 Msa1345490:intergenic 45.0%
CCAGCAGTTACAAGTGGTTA+AGG - tig0007210:8832-8851 Msa1345490:intron 45.0%
ACGTAATAGATGCGGACTTG+AGG - tig0007210:9254-9273 Msa1345490:intron 45.0%
AATAGATGCGGACTTGAGGT+TGG - tig0007210:9258-9277 Msa1345490:intron 45.0%
GGTTGGAACATTGGATCACT+AGG - tig0007210:9275-9294 Msa1345490:intron 45.0%
GGAACATTGGATCACTAGGT+AGG - tig0007210:9279-9298 Msa1345490:intron 45.0%
TCAAACTCATGCCATGCTTG+AGG - tig0007210:9304-9323 Msa1345490:intron 45.0%
CAAACTCATGCCATGCTTGA+GGG - tig0007210:9305-9324 Msa1345490:intron 45.0%
GTCGAGACTAAGCTGCTAAA+AGG + tig0007210:9339-9358 Msa1345490:intergenic 45.0%
TTTAGCAGCTTAGTCTCGAC+CGG - tig0007210:9339-9358 Msa1345490:intron 45.0%
TGTACTGTAGTAGTAGCCAC+CGG + tig0007210:9361-9380 Msa1345490:intergenic 45.0%
! CCCACAACACTGTATTTTCG+AGG + tig0007210:9437-9456 Msa1345490:intergenic 45.0%
AATACAGTGTTGTGGGCTTG+AGG - tig0007210:9441-9460 Msa1345490:intron 45.0%
ACAGTTCGACCACTTGATAG+TGG + tig0007210:9720-9739 Msa1345490:intergenic 45.0%
!! CATATTTCCTCGGTGCCTAT+TGG - tig0007210:9937-9956 Msa1345490:CDS 45.0%
ATGGTGAACATTAGCGTCGT+TGG + tig0007210:9964-9983 Msa1345490:intergenic 45.0%
AATTTGTCCGGTCCCGATTT+GGG + tig0007210:10432-10451 Msa1345490:intergenic 45.0%
AAATTTGTCCGGTCCCGATT+TGG + tig0007210:10433-10452 Msa1345490:intergenic 45.0%
CCACTCCAGCACAAAGATTA+GGG + tig0007210:10585-10604 Msa1345490:intergenic 45.0%
ACCACTCCAGCACAAAGATT+AGG + tig0007210:10586-10605 Msa1345490:intergenic 45.0%
! CACGCTTGAGTTGCCAAAAA+TGG + tig0007210:10924-10943 Msa1345490:intergenic 45.0%
!!! CATTTTTGGCAACTCAAGCG+TGG - tig0007210:10922-10941 Msa1345490:intron 45.0%
ATTACAGGGAGGAGGACATA+CGG - tig0007210:11241-11260 Msa1345490:intron 45.0%
CGCAATTTCACACGACTTGT+AGG + tig0007210:11557-11576 Msa1345490:intergenic 45.0%
! CACATTCCTTTTTCTCACCC+TGG + tig0007210:11638-11657 Msa1345490:intergenic 45.0%
!! ACTTAAATAAAATAAAAAAT+TGG + tig0007210:2932-2951 Msa1345490:intergenic 5.0%
!!! TTTTTTATTTTATTTAAGTT+TGG - tig0007210:2933-2952 Msa1345490:intron 5.0%
!!! TAATTATTTTGAATTAATTT+TGG + tig0007210:6217-6236 Msa1345490:intergenic 5.0%
!!! ATAATAAGATAATAATTTTT+CGG + tig0007210:10379-10398 Msa1345490:intergenic 5.0%
!! TTATTTATACAAATAATAAA+AGG - tig0007210:10514-10533 Msa1345490:intron 5.0%
AACAGGGAAGAGAAGTGGTG+TGG - tig0007210:1809-1828 Msa1345490:three_prime_UTR 50.0%
CCGGTTAACCAAAGCAAGAG+AGG + tig0007210:2153-2172 Msa1345490:intergenic 50.0%
CTCTTGCTTTGGTTAACCGG+TGG - tig0007210:2153-2172 Msa1345490:exon 50.0%
TAACCAGTGGTCCGAAGTAC+CGG - tig0007210:2479-2498 Msa1345490:intron 50.0%
GGACATGCTAACCGGTACTT+CGG + tig0007210:2493-2512 Msa1345490:intergenic 50.0%
GAGGCCACATTCATGGACAA+AGG - tig0007210:2748-2767 Msa1345490:CDS 50.0%
AACATGTTGGGGTGAGGAAG+GGG + tig0007210:3200-3219 Msa1345490:intergenic 50.0%
CAACATGTTGGGGTGAGGAA+GGG + tig0007210:3201-3220 Msa1345490:intergenic 50.0%
GTATCCAACATGTTGGGGTG+AGG + tig0007210:3206-3225 Msa1345490:intergenic 50.0%
TTGGATTTGCCTGTGGGTAC+TGG - tig0007210:3483-3502 Msa1345490:intron 50.0%
GGTACCATGCTCACAATGAC+TGG - tig0007210:3801-3820 Msa1345490:intron 50.0%
ATGAAGGTGGTCTTCAACCG+TGG - tig0007210:4105-4124 Msa1345490:intron 50.0%
TCAACCGTGGATAAACCTCC+AGG - tig0007210:4118-4137 Msa1345490:intron 50.0%
CGAACCTGGAGGTTTATCCA+CGG + tig0007210:4125-4144 Msa1345490:intergenic 50.0%
TGGGTAAGTGGGAGTTGAAC+CGG + tig0007210:5675-5694 Msa1345490:intergenic 50.0%
GTTATGACCCACCAACGAAC+CGG + tig0007210:5739-5758 Msa1345490:intergenic 50.0%
! GGTTCGTTGGTGGGTCATAA+CGG - tig0007210:5738-5757 Msa1345490:intron 50.0%
TCGGATATGCAAGCAACCCA+GGG + tig0007210:5807-5826 Msa1345490:intergenic 50.0%
ATCGGATATGCAAGCAACCC+AGG + tig0007210:5808-5827 Msa1345490:intergenic 50.0%
TGTGCGTGCATAAGACACGT+TGG - tig0007210:5999-6018 Msa1345490:intron 50.0%
! TTTTGAACGGGTATGTGCGC+GGG + tig0007210:6038-6057 Msa1345490:intergenic 50.0%
GCGCACATACCCGTTCAAAA+TGG - tig0007210:6038-6057 Msa1345490:intron 50.0%
GGTATTTGCCTGTCCATCGT+AGG - tig0007210:6100-6119 Msa1345490:intron 50.0%
ATCGTGAGCTGGCCAAGTTA+CGG + tig0007210:6514-6533 Msa1345490:intergenic 50.0%
GGCTTACCTCTTGATAGGAC+TGG + tig0007210:6813-6832 Msa1345490:intergenic 50.0%
!! CTCCTACCATTGGCTTCCAT+TGG + tig0007210:8135-8154 Msa1345490:intergenic 50.0%
CAATGGAAGCCAATGGTAGG+AGG - tig0007210:8133-8152 Msa1345490:intron 50.0%
! GGTTAGCCAGCAGTTACAAG+TGG - tig0007210:8826-8845 Msa1345490:intron 50.0%
! TCTCGTTGGATTGGAGAGAG+TGG + tig0007210:9168-9187 Msa1345490:intergenic 50.0%
GGCTCACACAAGATCCAAAG+CGG - tig0007210:9217-9236 Msa1345490:intron 50.0%
GCTCACACAAGATCCAAAGC+GGG - tig0007210:9218-9237 Msa1345490:intron 50.0%
CGGACTTGAGGTTGGAACAT+TGG - tig0007210:9266-9285 Msa1345490:intron 50.0%
GGTCTATCAACCCTCAAGCA+TGG + tig0007210:9318-9337 Msa1345490:intergenic 50.0%
ATTAGCGTCGTTGGCCCAAT+AGG + tig0007210:9955-9974 Msa1345490:intergenic 50.0%
CCTTTCGAATGTGCAGTGCA+TGG + tig0007210:9983-10002 Msa1345490:intergenic 50.0%
CCATGCACTGCACATTCGAA+AGG - tig0007210:9980-9999 Msa1345490:CDS 50.0%
GTGCACCCTAATCTTTGTGC+TGG - tig0007210:10577-10596 Msa1345490:intron 50.0%
CCCTAATCTTTGTGCTGGAG+TGG - tig0007210:10582-10601 Msa1345490:intron 50.0%
CTGCCTCCAATCATCAACGA+TGG + tig0007210:10967-10986 Msa1345490:intergenic 50.0%
!! TCGTTGATGATTGGAGGCAG+TGG - tig0007210:10967-10986 Msa1345490:intron 50.0%
GCTTAGCCATGTTCAGTAGG+TGG - tig0007210:11288-11307 Msa1345490:CDS 50.0%
AGGGAACCAGGGTGAGAAAA+AGG - tig0007210:11629-11648 Msa1345490:exon 50.0%
GGGGTCCTTGAAAACCAGGA+AGG + tig0007210:2017-2036 Msa1345490:intergenic 55.0%
GGAAGGGGTCCTTGAAAACC+AGG + tig0007210:2021-2040 Msa1345490:intergenic 55.0%
AGAAACTGGGTACGTGGGAG+TGG - tig0007210:2050-2069 Msa1345490:three_prime_UTR 55.0%
GAAACTGGGTACGTGGGAGT+GGG - tig0007210:2051-2070 Msa1345490:three_prime_UTR 55.0%
CTTTGGTTAACCGGTGGTCC+TGG - tig0007210:2159-2178 Msa1345490:exon 55.0%
CCAGAGAAAGCAGAGCAACC+AGG + tig0007210:2180-2199 Msa1345490:intergenic 55.0%
CCTGGTTGCTCTGCTTTCTC+TGG - tig0007210:2177-2196 Msa1345490:CDS 55.0%
TAACCGGTACTTCGGACCAC+TGG + tig0007210:2485-2504 Msa1345490:intergenic 55.0%
ACATGTTGGGGTGAGGAAGG+GGG + tig0007210:3199-3218 Msa1345490:intergenic 55.0%
CCAACATGTTGGGGTGAGGA+AGG + tig0007210:3202-3221 Msa1345490:intergenic 55.0%
CCTTCCTCACCCCAACATGT+TGG - tig0007210:3199-3218 Msa1345490:intron 55.0%
! GTGCTGCTCAGCAAAGCACT+TGG - tig0007210:3529-3548 Msa1345490:intron 55.0%
AGTGACCCAGTACCTTGACC+GGG + tig0007210:4628-4647 Msa1345490:intergenic 55.0%
CAGTGACCCAGTACCTTGAC+CGG + tig0007210:4629-4648 Msa1345490:intergenic 55.0%
!! GGTCAAGGTACTGGGTCACT+GGG - tig0007210:4628-4647 Msa1345490:intron 55.0%
!! TGGTCGGACCAATGGGTTAC+TGG - tig0007210:4655-4674 Msa1345490:intron 55.0%
!! CGGACCAATGGGTTACTGGT+CGG - tig0007210:4659-4678 Msa1345490:intron 55.0%
AGAAAACCTGTGCGACGCAC+GGG + tig0007210:4983-5002 Msa1345490:intergenic 55.0%
GAGAAAACCTGTGCGACGCA+CGG + tig0007210:4984-5003 Msa1345490:intergenic 55.0%
GGGTAAGTGGGAGTTGAACC+GGG + tig0007210:5674-5693 Msa1345490:intergenic 55.0%
! TAGAATCCGGTCCGGTTCGT+TGG - tig0007210:5725-5744 Msa1345490:intron 55.0%
GGTGGGTCATAACGGTTCAC+TGG - tig0007210:5746-5765 Msa1345490:intron 55.0%
TGCAAGCAACCCAGGGAACT+CGG + tig0007210:5800-5819 Msa1345490:intergenic 55.0%
TCGTGAGCTGGCCAAGTTAC+GGG + tig0007210:6513-6532 Msa1345490:intergenic 55.0%
ACATTGGCCCAAATCGGGAC+CGG - tig0007210:10422-10441 Msa1345490:intron 55.0%
AGCAGAGCAACCAGGACCAC+CGG + tig0007210:2172-2191 Msa1345490:intergenic 60.0%
ACCTTGACCGGGTCGACTAC+CGG + tig0007210:4617-4636 Msa1345490:intergenic 60.0%
AGTCGACCCGGTCAAGGTAC+TGG - tig0007210:4619-4638 Msa1345490:intron 60.0%
! GTCGACCCGGTCAAGGTACT+GGG - tig0007210:4620-4639 Msa1345490:intron 60.0%
!! CGGTCAAGGTACTGGGTCAC+TGG - tig0007210:4627-4646 Msa1345490:intron 60.0%
GTACTGGGTCACTGGGTCAG+TGG - tig0007210:4635-4654 Msa1345490:intron 60.0%
TGGGTCACTGGGTCAGTGGT+CGG - tig0007210:4639-4658 Msa1345490:intron 60.0%
TGGGTCAGTGGTCGGACCAA+TGG - tig0007210:4647-4666 Msa1345490:intron 60.0%
GGGTCAGTGGTCGGACCAAT+GGG - tig0007210:4648-4667 Msa1345490:intron 60.0%
CGGTCCGACCAGTAACCCAT+TGG + tig0007210:4666-4685 Msa1345490:intergenic 60.0%
! TTTTGACCCGTGCGTCGCAC+AGG - tig0007210:4974-4993 Msa1345490:intron 60.0%
! AATCCGGTCCGGTTCGTTGG+TGG - tig0007210:5728-5747 Msa1345490:intron 60.0%
! ATCCGGTCCGGTTCGTTGGT+GGG - tig0007210:5729-5748 Msa1345490:intron 60.0%
!! GAACTCGGTGTGACTCGTGC+GGG + tig0007210:5785-5804 Msa1345490:intergenic 60.0%
!! GGAACTCGGTGTGACTCGTG+CGG + tig0007210:5786-5805 Msa1345490:intergenic 60.0%
ACGAGTCACACCGAGTTCCC+TGG - tig0007210:5787-5806 Msa1345490:intron 60.0%
CGAGTCACACCGAGTTCCCT+GGG - tig0007210:5788-5807 Msa1345490:intron 60.0%
GACTCAGGAACCAGAGGGGT+GGG + tig0007210:5851-5870 Msa1345490:intergenic 60.0%
! GGTCGACTCAGGAACCAGAG+GGG + tig0007210:5855-5874 Msa1345490:intergenic 60.0%
! CGGTCGACTCAGGAACCAGA+GGG + tig0007210:5856-5875 Msa1345490:intergenic 60.0%
! CCTCTGGTTCCTGAGTCGAC+CGG - tig0007210:5854-5873 Msa1345490:intron 60.0%
TGGTTCCTGAGTCGACCGGT+TGG - tig0007210:5858-5877 Msa1345490:intron 60.0%
AAAATCCGGACCGACCCGGT+CGG + tig0007210:5885-5904 Msa1345490:intergenic 60.0%
AGCAGCTTAGTCTCGACCGG+TGG - tig0007210:9342-9361 Msa1345490:intron 60.0%
ACCGGTAGTCGACCCGGTCA+AGG - tig0007210:4613-4632 Msa1345490:intron 65.0%
GACCCACCAACGAACCGGAC+CGG + tig0007210:5734-5753 Msa1345490:intergenic 65.0%
TCGGTGTGACTCGTGCGGGT+CGG + tig0007210:5781-5800 Msa1345490:intergenic 65.0%
TCAGGAACCAGAGGGGTGGG+CGG + tig0007210:5848-5867 Msa1345490:intergenic 65.0%
CGACTCAGGAACCAGAGGGG+TGG + tig0007210:5852-5871 Msa1345490:intergenic 65.0%
! CCGGTCGACTCAGGAACCAG+AGG + tig0007210:5857-5876 Msa1345490:intergenic 65.0%
! TCGGTCCAACCGGTCGACTC+AGG + tig0007210:5866-5885 Msa1345490:intergenic 65.0%
AGTCGACCGGTTGGACCGAC+CGG - tig0007210:5867-5886 Msa1345490:intron 65.0%
AACGGGTATGTGCGCGGGTG+CGG + tig0007210:6033-6052 Msa1345490:intergenic 65.0%
! CGTTGGCCCAATAGGCACCG+AGG + tig0007210:9947-9966 Msa1345490:intergenic 65.0%
ACCCGGACCGGTAGTCGACC+CGG - tig0007210:4607-4626 Msa1345490:intron 70.0%
ACCGGGTCGACTACCGGTCC+GGG + tig0007210:4611-4630 Msa1345490:intergenic 70.0%
GACCGGGTCGACTACCGGTC+CGG + tig0007210:4612-4631 Msa1345490:intergenic 70.0%
GTGACTCGTGCGGGTCGGGT+GGG + tig0007210:5776-5795 Msa1345490:intergenic 70.0%
TGTGACTCGTGCGGGTCGGG+TGG + tig0007210:5777-5796 Msa1345490:intergenic 70.0%
CGGTGTGACTCGTGCGGGTC+GGG + tig0007210:5780-5799 Msa1345490:intergenic 70.0%
GAACAACCCGCCCACCCCTC+TGG - tig0007210:5838-5857 Msa1345490:intron 70.0%
CAGGAACCAGAGGGGTGGGC+GGG + tig0007210:5847-5866 Msa1345490:intergenic 70.0%
GTCGACCGGTTGGACCGACC+GGG - tig0007210:5868-5887 Msa1345490:intron 70.0%
ACCGGTTGGACCGACCGGGT+CGG - tig0007210:5872-5891 Msa1345490:intron 70.0%
ACCGACCCGGTCGGTCCAAC+CGG + tig0007210:5876-5895 Msa1345490:intergenic 70.0%
TTGGACCGACCGGGTCGGTC+CGG - tig0007210:5877-5896 Msa1345490:intron 70.0%
Chromosome Type Strat End Strand Name
tig0007210 gene 1711 11783 1711 ID=Msa1345490;Name=Msa1345490
tig0007210 mRNA 1711 11783 1711 ID=Msa1345490-mRNA-1;Parent=Msa1345490;Name=Msa1345490-mRNA-1;_AED=0.33;_eAED=0.33;_QI=145|0.90|1|1|0.90|0.91|12|452|469
tig0007210 exon 1711 2246 1711 ID=Msa1345490-mRNA-1:exon:5016;Parent=Msa1345490-mRNA-1
tig0007210 exon 2346 2391 2346 ID=Msa1345490-mRNA-1:exon:5015;Parent=Msa1345490-mRNA-1
tig0007210 exon 2482 2595 2482 ID=Msa1345490-mRNA-1:exon:5014;Parent=Msa1345490-mRNA-1
tig0007210 exon 2735 2853 2735 ID=Msa1345490-mRNA-1:exon:5013;Parent=Msa1345490-mRNA-1
tig0007210 exon 5270 5425 5270 ID=Msa1345490-mRNA-1:exon:5012;Parent=Msa1345490-mRNA-1
tig0007210 exon 6669 6755 6669 ID=Msa1345490-mRNA-1:exon:5011;Parent=Msa1345490-mRNA-1
tig0007210 exon 6901 7002 6901 ID=Msa1345490-mRNA-1:exon:5010;Parent=Msa1345490-mRNA-1
tig0007210 exon 9355 9392 9355 ID=Msa1345490-mRNA-1:exon:5009;Parent=Msa1345490-mRNA-1
tig0007210 exon 9693 9795 9693 ID=Msa1345490-mRNA-1:exon:5008;Parent=Msa1345490-mRNA-1
tig0007210 exon 9907 10029 9907 ID=Msa1345490-mRNA-1:exon:5007;Parent=Msa1345490-mRNA-1
tig0007210 exon 10725 10801 10725 ID=Msa1345490-mRNA-1:exon:5006;Parent=Msa1345490-mRNA-1
tig0007210 exon 11278 11783 11278 ID=Msa1345490-mRNA-1:exon:5005;Parent=Msa1345490-mRNA-1
tig0007210 five_prime_UTR 11639 11783 11639 ID=Msa1345490-mRNA-1:five_prime_utr;Parent=Msa1345490-mRNA-1
tig0007210 CDS 11278 11638 11278 ID=Msa1345490-mRNA-1:cds;Parent=Msa1345490-mRNA-1
tig0007210 CDS 10725 10801 10725 ID=Msa1345490-mRNA-1:cds;Parent=Msa1345490-mRNA-1
tig0007210 CDS 9907 10029 9907 ID=Msa1345490-mRNA-1:cds;Parent=Msa1345490-mRNA-1
tig0007210 CDS 9693 9795 9693 ID=Msa1345490-mRNA-1:cds;Parent=Msa1345490-mRNA-1
tig0007210 CDS 9355 9392 9355 ID=Msa1345490-mRNA-1:cds;Parent=Msa1345490-mRNA-1
tig0007210 CDS 6901 7002 6901 ID=Msa1345490-mRNA-1:cds;Parent=Msa1345490-mRNA-1
tig0007210 CDS 6669 6755 6669 ID=Msa1345490-mRNA-1:cds;Parent=Msa1345490-mRNA-1
tig0007210 CDS 5270 5425 5270 ID=Msa1345490-mRNA-1:cds;Parent=Msa1345490-mRNA-1
tig0007210 CDS 2735 2853 2735 ID=Msa1345490-mRNA-1:cds;Parent=Msa1345490-mRNA-1
tig0007210 CDS 2482 2595 2482 ID=Msa1345490-mRNA-1:cds;Parent=Msa1345490-mRNA-1
tig0007210 CDS 2346 2391 2346 ID=Msa1345490-mRNA-1:cds;Parent=Msa1345490-mRNA-1
tig0007210 CDS 2163 2246 2163 ID=Msa1345490-mRNA-1:cds;Parent=Msa1345490-mRNA-1
tig0007210 three_prime_UTR 1711 2162 1711 ID=Msa1345490-mRNA-1:three_prime_utr;Parent=Msa1345490-mRNA-1
Gene Sequence

>Msa1345490

ATGGCAATGCTTAGGCATAGTTCACATCACAGTGGTGACATTATTATTACTAGAACCTTGTTTAAGATGATTATAATATTTGTTATAGCATTCCTATTGTTACAAAATTCATCCACCAACCTTGTTTTTGCAACATCTCAATCCAATATTGTAAAATTCCTTCCTGGTTTTCAAGGACCCCTTCCCTTTGTACTAGAAACTGGGTACGTGGGAGTGGGTGAAACTGAAACAGATGAAATTGCCGCGGAATTGTTCTACTATTTTATAGAATCTGAGAATAATCCTAAACAAGATCCTCTCTTGCTTTGGTTAACCGGTGGTCCTGGTTGCTCTGCTTTCTCTGGCCTTGCCTTTGAAATAGGTCCAATAACATTTAAAAATGAGGAATACAACGGGAGCTTACCAAATTTGATCTTGAGGCCACATTCATGGACAAAGGTAAGTAATATTATATTTTTGGATTTGCCTGTGGGTACTGGATTCTCTTATCCCAAAACAGAAAGTGCTGCTCAGCAAAGCACTTGGAAGCTAGTTCACAATGCTCATCAATTTCTTAGGAAGTGGCTCATGGATCATCCAAAATTTATCTCAAATGAAGTGTACATTGCTGGTGACTCATACTCAGGCATTCCCGTCCCAATTATCGTTCAAGAAATTTCATATGGAAATGAAGGTGGTCTTCAACCGTGGATAAACCTCCAGGGATACATATTAGGAAATCCCGTAACTTGGCCAGCTCACGATGATAATTACAGAATAGCATTTAATCATGGCATGGGACTTATTTCTAATGAACTCTACGAGTCATTGCAAAAGAACTGTAGAGGTGAGTATAAAAATATAGATCCCCAAAATGTATTTTGTCTAGAAGACATCCAGTCCTATCAAGAGACTATTTCAGGAGTTTCTGAAGTTCATATTTTGGAACCGAAATGCGAGTTTGGTTTGCCTAATCCAATGGAAGCCAATGGTAGGAGGAGACTTCTTATTCACAAGGCCAACCCTATCTTTACTTCTTCTCTTACATTGCCACCTTTATACTGTCGGGGAAGTATAGGAAAATGGAAGCGTTGTAACTTTGACATAACTTTCAAGCACGAAATAGTTAACAGCTTTGAGTATCATGTAAATCTTAGCAGAAAAGGTTATCGTTCATTAATATACAGTGGGGATCATGACATGAAAGTTCCATTTTTGGCAACTCAAGCGTGGATAAGATCTTTAAACTATTCCATCGTTGATGATTGGAGGCAGTGGTATTCTAATTCTCAAGTAGCAGGATACACAAGGACTTACTCAAATCGGATGACATTTGCAACTGTGAAGGGAGGAGGACATACGGCTCCCGAGTACAAACGTGAAGAATGCTTAGCCATGTTCAGTAGGTGGATATCTAATTACCCACTCTAG
Protein sequence

>Msa1345490

MAMLRHSSHHSGDIIITRTLFKMIIIFVIAFLLLQNSSTNLVFATSQSNIVKFLPGFQGPLPFVLETGYVGVGETETDEIAAELFYYFIESENNPKQDPLLLWLTGGPGCSAFSGLAFEIGPITFKNEEYNGSLPNLILRPHSWTKVSNIIFLDLPVGTGFSYPKTESAAQQSTWKLVHNAHQFLRKWLMDHPKFISNEVYIAGDSYSGIPVPIIVQEISYGNEGGLQPWINLQGYILGNPVTWPAHDDNYRIAFNHGMGLISNELYESLQKNCRGEYKNIDPQNVFCLEDIQSYQETISGVSEVHILEPKCEFGLPNPMEANGRRRLLIHKANPIFTSSLTLPPLYCRGSIGKWKRCNFDITFKHEIVNSFEYHVNLSRKGYRSLIYSGDHDMKVPFLATQAWIRSLNYSIVDDWRQWYSNSQVAGYTRTYSNRMTFATVKGGGHTAPEYKREECLAMFSRWISNYPL*