AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0379890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0379890 MtrunA17_Chr3g0133011 91.451 503 33 3 1 500 1 496 0.0 950
Msa0379890 MtrunA17_Chr2g0285351 66.807 476 140 6 26 500 11 469 0.0 644
Msa0379890 MtrunA17_Chr2g0285371 66.450 462 140 6 40 500 22 469 0.0 626
Msa0379890 MtrunA17_Chr2g0285381 63.793 464 144 8 39 500 24 465 0.0 594
Msa0379890 MtrunA17_Chr4g0009701 62.222 450 151 6 51 500 40 470 0.0 581
Msa0379890 MtrunA17_Chr4g0009681 59.705 474 170 7 27 500 15 467 0.0 574
Msa0379890 MtrunA17_Chr4g0009711 56.452 496 182 8 5 500 9 470 0.0 561
Msa0379890 MtrunA17_Chr4g0009661 59.111 450 165 6 51 500 40 470 0.0 559
Msa0379890 MtrunA17_Chr4g0009651 58.889 450 166 6 51 500 40 470 0.0 557
Msa0379890 MtrunA17_Chr4g0009671 58.876 445 162 7 57 500 11 435 0.0 541
Msa0379890 MtrunA17_Chr4g0009641 57.778 450 147 7 51 500 40 446 0.0 523
Msa0379890 MtrunA17_Chr4g0009721 46.947 475 182 13 27 500 14 419 3.49e-136 399
Msa0379890 MtrunA17_Chr3g0093971 41.372 452 235 7 49 496 25 450 2.13e-121 363
Msa0379890 MtrunA17_Chr8g0338461 39.370 508 254 12 28 500 7 495 7.53e-118 355
Msa0379890 MtrunA17_Chr7g0249431 39.087 504 261 12 23 495 5 493 4.36e-114 346
Msa0379890 MtrunA17_Chr7g0234051 38.447 515 263 12 20 500 1 495 9.69e-113 342
Msa0379890 MtrunA17_Chr7g0234041 36.117 479 227 16 31 464 5 449 6.52e-85 270
Msa0379890 MtrunA17_Chr4g0038311 30.608 477 301 13 28 500 12 462 1.58e-57 197
Msa0379890 MtrunA17_Chr2g0281621 30.290 482 296 17 23 495 9 459 7.27e-56 193
Msa0379890 MtrunA17_Chr4g0068841 28.685 502 298 16 23 496 3 472 6.76e-53 186
Msa0379890 MtrunA17_Chr4g0047861 31.155 459 275 16 48 495 51 479 1.59e-52 185
Msa0379890 MtrunA17_Chr7g0219051 29.268 492 306 18 18 500 5 463 1.48e-51 182
Msa0379890 MtrunA17_Chr2g0309541 27.386 482 308 13 23 496 11 458 1.76e-51 182
Msa0379890 MtrunA17_Chr2g0318911 28.980 490 300 14 17 496 7 458 1.05e-50 179
Msa0379890 MtrunA17_Chr2g0309511 28.866 485 293 14 26 495 9 456 6.63e-50 177
Msa0379890 MtrunA17_Chr3g0131731 29.574 470 265 14 54 500 34 460 2.06e-49 176
Msa0379890 MtrunA17_Chr8g0385871 29.774 487 291 17 29 500 11 461 4.40e-49 175
Msa0379890 MtrunA17_Chr2g0309521 27.593 482 303 14 26 495 9 456 8.96e-49 174
Msa0379890 MtrunA17_Chr1g0199971 27.812 489 309 14 16 497 1 452 1.19e-48 174
Msa0379890 MtrunA17_Chr1g0199991 29.193 483 295 15 24 497 8 452 1.68e-48 173
Msa0379890 MtrunA17_Chr4g0068861 27.983 461 289 14 14 456 41 476 1.97e-47 171
Msa0379890 MtrunA17_Chr2g0279371 46.552 174 74 1 49 222 26 180 2.17e-46 160
Msa0379890 MtrunA17_Chr2g0304931 29.698 431 245 16 83 495 66 456 3.42e-46 167
Msa0379890 MtrunA17_Chr3g0118841 29.754 447 265 14 54 495 82 484 8.75e-46 167
Msa0379890 MtrunA17_Chr7g0221551 27.273 495 294 13 25 500 9 456 9.25e-46 166
Msa0379890 MtrunA17_Chr3g0094811 27.255 499 304 16 15 500 1 453 1.39e-44 162
Msa0379890 MtrunA17_Chr3g0118851 29.754 447 266 15 54 495 81 484 1.90e-44 163
Msa0379890 MtrunA17_Chr3g0126031 27.893 484 294 18 25 495 9 450 1.69e-43 160
Msa0379890 MtrunA17_Chr3g0126051 28.322 459 281 18 50 495 34 457 2.83e-43 159
Msa0379890 MtrunA17_Chr1g0153881 30.736 462 251 18 47 495 86 491 1.92e-42 157
Msa0379890 MtrunA17_Chr4g0020241 26.523 509 302 15 6 500 36 486 2.76e-42 157
Msa0379890 MtrunA17_Chr5g0431301 26.739 460 294 16 49 496 28 456 7.19e-42 155
Msa0379890 MtrunA17_Chr3g0090331 26.439 469 280 13 47 500 71 489 1.38e-41 155
Msa0379890 MtrunA17_Chr3g0118881 29.322 457 263 15 54 495 81 492 2.89e-41 154
Msa0379890 MtrunA17_Chr4g0028271 26.790 433 249 12 81 495 109 491 1.91e-39 149
Msa0379890 MtrunA17_Chr3g0118831 27.313 454 251 14 47 495 74 453 3.60e-39 148
Msa0379890 MtrunA17_Chr2g0281641 29.017 417 248 16 101 500 1 386 4.61e-39 146
Msa0379890 MtrunA17_Chr2g0279381 33.796 216 136 4 244 458 2 211 1.70e-38 139
Msa0379890 MtrunA17_Chr3g0118891 27.803 446 243 14 54 495 81 451 4.46e-38 145
Msa0379890 MtrunA17_Chr3g0118861 26.957 460 256 13 47 495 72 462 7.58e-37 142
Msa0379890 MtrunA17_Chr1g0153941 26.653 484 273 16 45 495 72 506 9.71e-37 142
Msa0379890 MtrunA17_Chr1g0204191 26.538 520 289 18 3 500 41 489 1.14e-36 141
Msa0379890 MtrunA17_Chr4g0028261 26.207 435 252 14 80 495 129 513 1.84e-36 141
Msa0379890 MtrunA17_Chr4g0028281 25.891 421 268 12 81 495 107 489 2.32e-33 132
Msa0379890 MtrunA17_Chr4g0028241 25.000 424 274 9 81 496 101 488 3.00e-33 132
Msa0379890 MtrunA17_Chr5g0447441 27.434 452 245 20 66 495 42 432 3.68e-32 128
Msa0379890 MtrunA17_Chr2g0327381 31.502 273 163 9 13 279 39 293 4.51e-31 126
Msa0379890 MtrunA17_Chr2g0327401 32.743 226 140 3 54 279 85 298 2.03e-30 124
Msa0379890 MtrunA17_Chr2g0285401 77.419 62 14 0 403 464 29 90 2.62e-30 113
Msa0379890 MtrunA17_Chr1g0199171 33.166 199 119 3 81 279 102 286 7.14e-30 122
Msa0379890 MtrunA17_Chr1g0171411 34.171 199 118 3 81 279 95 280 4.56e-29 120
Msa0379890 MtrunA17_Chr2g0327371 31.481 270 145 8 13 279 39 271 1.16e-27 115
Msa0379890 MtrunA17_Chr1g0153931 35.673 171 99 4 51 219 76 237 2.71e-23 99.4
Msa0379890 MtrunA17_Chr4g0044051 23.714 447 266 14 67 495 47 436 1.44e-22 100
Msa0379890 MtrunA17_Chr1g0165811 30.769 247 134 9 42 281 22 238 1.59e-22 97.1
Msa0379890 MtrunA17_Chr6g0457241 55.357 56 25 0 425 480 1 56 5.43e-16 72.0
Msa0379890 MtrunA17_Chr1g0165821 27.660 141 94 3 366 500 39 177 6.14e-15 73.2
Msa0379890 MtrunA17_Chr1g0153921 25.764 229 143 8 267 495 9 210 2.75e-13 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0379890 AT5G09640.1 53.445 479 199 9 27 500 6 465 9.47e-173 495
Msa0379890 AT1G33540.1 53.728 456 191 6 48 500 26 464 1.51e-172 494
Msa0379890 AT3G10450.1 52.632 456 175 4 45 500 23 437 6.92e-169 484
Msa0379890 AT1G73300.1 54.084 453 167 4 48 500 30 441 1.56e-168 483
Msa0379890 AT1G73300.2 54.084 453 167 4 48 500 30 441 1.56e-168 483
Msa0379890 AT2G22920.2 53.084 454 170 5 49 500 23 435 3.69e-168 482
Msa0379890 AT5G36180.1 53.863 453 168 4 48 500 30 441 9.08e-166 476
Msa0379890 AT1G73280.1 51.535 456 180 4 45 500 27 441 4.32e-165 474
Msa0379890 AT1G73290.1 52.980 453 170 5 48 500 29 438 7.90e-165 474
Msa0379890 AT2G23000.1 52.993 451 175 7 50 500 24 437 1.73e-164 473
Msa0379890 AT2G23000.2 52.993 451 175 7 50 500 24 437 1.73e-164 473
Msa0379890 AT2G22970.1 51.876 453 175 6 49 500 23 433 7.63e-164 471
Msa0379890 AT3G12240.1 51.214 453 180 4 48 500 25 436 1.84e-163 470
Msa0379890 AT2G22990.1 51.974 456 180 6 45 500 17 433 6.39e-163 469
Msa0379890 AT1G33540.2 53.563 435 182 6 69 500 4 421 6.80e-162 466
Msa0379890 AT1G73310.1 52.318 453 175 4 48 500 30 441 1.20e-161 466
Msa0379890 AT3G12230.1 50.658 456 184 4 45 500 21 435 1.23e-161 465
Msa0379890 AT3G12203.3 51.441 451 175 5 51 500 9 416 1.59e-161 464
Msa0379890 AT1G73270.1 52.539 453 174 4 48 500 30 441 1.93e-161 466
Msa0379890 AT1G73270.2 52.539 453 174 4 48 500 30 441 2.16e-161 465
Msa0379890 AT3G12203.1 50.542 461 184 5 41 500 20 437 3.15e-161 464
Msa0379890 AT2G22980.1 51.656 453 172 5 49 500 24 430 3.78e-161 464
Msa0379890 AT2G23010.1 50.209 478 197 8 23 500 1 437 4.47e-159 459
Msa0379890 AT2G23010.2 49.791 478 199 8 23 500 1 437 2.28e-157 454
Msa0379890 AT3G10450.4 51.628 430 168 3 45 474 23 412 4.90e-156 450
Msa0379890 AT3G10450.2 51.620 432 168 4 69 500 4 394 1.03e-155 449
Msa0379890 AT3G12220.1 51.002 449 179 4 48 496 24 431 1.95e-155 449
Msa0379890 AT2G22970.4 51.522 427 165 5 49 474 23 408 2.44e-154 446
Msa0379890 AT2G22970.3 51.515 429 166 5 49 476 23 410 2.55e-154 447
Msa0379890 AT2G22990.5 50.219 456 179 7 45 500 17 424 1.22e-153 444
Msa0379890 AT2G22990.3 50.922 434 175 5 45 478 17 412 3.89e-151 439
Msa0379890 AT2G22990.4 51.163 430 172 5 45 474 17 408 5.45e-151 437
Msa0379890 AT2G22980.2 50.820 427 164 4 49 474 24 405 1.77e-150 436
Msa0379890 AT2G22980.4 50.820 427 164 4 49 474 24 405 4.77e-150 436
Msa0379890 AT2G22920.1 51.332 413 159 4 49 459 23 395 4.87e-147 427
Msa0379890 AT1G73310.2 51.442 416 162 3 48 463 30 405 2.60e-145 424
Msa0379890 AT1G73290.3 51.699 412 157 4 48 459 29 398 6.61e-145 421
Msa0379890 AT3G12203.2 50.239 418 168 4 84 500 1 379 2.43e-144 419
Msa0379890 AT3G10450.3 50.493 406 161 3 69 474 4 369 7.65e-143 415
Msa0379890 AT3G12220.2 49.766 428 174 4 69 496 15 401 4.95e-142 414
Msa0379890 AT5G36180.5 50.532 376 149 3 125 500 1 339 1.37e-123 365
Msa0379890 AT5G36180.3 50.532 376 149 3 125 500 1 339 1.37e-123 365
Msa0379890 AT1G73280.4 48.404 376 157 3 125 500 1 339 1.96e-122 362
Msa0379890 AT4G12910.1 38.791 513 253 11 19 495 5 492 5.26e-120 361
Msa0379890 AT1G73280.2 48.000 375 155 3 45 419 27 361 2.25e-119 355
Msa0379890 AT2G22990.6 50.000 354 142 5 147 500 1 319 8.43e-115 342
Msa0379890 AT2G22990.2 49.435 354 144 5 147 500 1 319 4.67e-113 337
Msa0379890 AT1G73280.3 48.433 351 144 3 150 500 1 314 5.34e-113 337
Msa0379890 AT5G36180.2 49.288 351 142 2 125 475 1 315 6.34e-113 337
Msa0379890 AT2G22980.3 47.059 374 150 5 49 419 24 352 1.18e-112 337
Msa0379890 AT2G22920.4 48.795 332 130 3 49 380 23 314 3.46e-108 325
Msa0379890 AT3G25420.1 36.905 504 270 12 24 496 4 490 1.68e-107 329
Msa0379890 AT2G22970.2 47.590 332 133 4 49 380 23 313 7.67e-105 316
Msa0379890 AT4G12910.2 37.605 476 236 11 19 458 5 455 4.49e-103 317
Msa0379890 AT5G36180.4 46.196 368 160 3 125 490 1 332 8.94e-103 311
Msa0379890 AT1G73310.3 47.337 338 142 2 126 463 2 303 3.83e-102 310
Msa0379890 AT1G73290.2 53.357 283 119 3 48 330 29 298 6.52e-99 300
Msa0379890 AT2G22980.5 46.809 329 133 4 147 474 1 288 1.54e-98 299
Msa0379890 AT2G22920.3 49.828 291 107 4 212 500 3 256 3.74e-92 281
Msa0379890 AT3G12220.3 57.576 231 87 2 48 278 24 243 5.63e-83 262
Msa0379890 AT3G12220.3 53.191 141 65 1 356 496 240 379 3.17e-44 160
Msa0379890 AT5G23210.1 31.579 475 286 13 42 500 43 494 3.67e-62 211
Msa0379890 AT2G22960.1 63.087 149 54 1 352 500 37 184 1.47e-60 197
Msa0379890 AT3G52020.1 30.526 475 280 13 35 500 64 497 1.97e-58 201
Msa0379890 AT3G52000.1 29.412 476 286 12 31 500 47 478 5.04e-58 200
Msa0379890 AT3G17180.1 30.377 451 266 16 67 500 55 474 5.55e-56 194
Msa0379890 AT4G15100.1 31.210 471 284 16 43 500 37 480 7.46e-56 194
Msa0379890 AT2G05850.1 29.832 476 270 18 42 500 55 483 2.02e-55 193
Msa0379890 AT4G30810.1 29.835 486 292 16 26 500 14 461 3.98e-55 192
Msa0379890 AT1G61130.1 30.271 479 281 16 39 499 15 458 6.26e-54 188
Msa0379890 AT1G11080.1 29.980 497 315 16 15 499 12 487 6.64e-54 189
Msa0379890 AT1G11080.2 29.980 497 315 16 15 499 12 487 6.98e-54 189
Msa0379890 AT3G52010.1 29.299 471 278 14 42 500 56 483 9.15e-54 188
Msa0379890 AT5G23210.3 31.090 431 259 12 42 456 43 451 1.61e-52 184
Msa0379890 AT5G08260.1 28.800 500 309 16 19 500 5 475 2.11e-52 185
Msa0379890 AT4G30610.1 30.488 492 290 17 25 500 6 461 2.31e-51 181
Msa0379890 AT2G35770.1 28.138 494 311 13 14 500 1 457 1.90e-48 174
Msa0379890 AT3G63470.1 28.078 463 280 15 47 500 78 496 3.93e-48 174
Msa0379890 AT2G24010.1 29.565 460 282 14 47 500 27 450 9.73e-48 171
Msa0379890 AT2G24000.1 29.258 458 288 14 47 496 27 456 1.79e-46 168
Msa0379890 AT1G28110.1 28.326 466 284 13 48 500 29 457 1.90e-46 168
Msa0379890 AT1G28110.2 28.326 466 284 13 48 500 29 457 1.90e-46 168
Msa0379890 AT2G35780.1 30.131 458 269 16 54 500 33 450 2.25e-46 168
Msa0379890 AT3G07990.1 28.105 459 279 16 54 500 37 456 4.57e-46 167
Msa0379890 AT5G23210.5 29.512 410 255 11 107 500 8 399 1.91e-45 164
Msa0379890 AT2G33530.1 28.450 471 283 16 46 500 29 461 3.01e-45 165
Msa0379890 AT3G17180.2 29.369 412 243 16 67 461 55 435 6.29e-45 163
Msa0379890 AT5G23210.2 29.340 409 255 11 108 500 8 398 1.75e-44 161
Msa0379890 AT2G12480.3 27.564 468 292 16 41 496 20 452 3.06e-44 162
Msa0379890 AT1G43780.1 26.598 485 318 12 21 495 8 464 8.10e-44 161
Msa0379890 AT3G02110.1 28.541 466 294 16 46 500 33 470 2.45e-43 160
Msa0379890 AT2G24010.2 28.421 475 283 15 47 500 27 465 8.95e-43 158
Msa0379890 AT5G42240.1 27.862 463 289 16 47 496 29 459 2.11e-42 157
Msa0379890 AT2G12480.4 26.496 468 273 15 41 496 20 428 1.60e-39 149
Msa0379890 AT2G12480.1 26.552 467 272 15 41 496 20 426 3.15e-39 148
Msa0379890 AT5G42230.1 28.145 469 290 18 42 495 18 454 8.52e-39 147
Msa0379890 AT5G42230.2 28.145 469 290 18 42 495 18 454 8.52e-39 147
Msa0379890 AT2G24010.3 28.056 499 273 19 50 500 1 461 1.11e-37 144
Msa0379890 AT2G12480.2 26.496 468 272 16 41 496 20 427 1.48e-37 143
Msa0379890 AT5G23210.4 28.219 365 229 10 108 456 8 355 9.77e-35 134
Msa0379890 AT3G45010.1 25.404 433 256 13 81 495 113 496 1.05e-34 136
Msa0379890 AT5G22980.1 25.835 449 270 12 62 495 91 491 1.06e-33 134
Msa0379890 AT3G10410.1 34.171 199 117 4 81 279 111 295 7.77e-29 120
Msa0379890 AT3G56540.1 36.313 179 103 4 32 209 61 229 2.15e-27 111
Msa0379890 AT2G24010.4 28.099 363 207 13 50 393 1 328 1.71e-24 105
Msa0379890 AT1G15000.1 23.364 428 262 15 81 495 47 421 7.69e-23 101
Msa0379890 AT5G22960.1 29.577 142 75 3 81 222 46 162 2.09e-18 83.6
Msa0379890 AT2G24000.2 25.000 272 188 7 230 496 133 393 5.69e-16 80.1

Find 148 sgRNAs with CRISPR-Local

Find 589 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTAGACAAAATACATTT+TGG 0.096140 3_1:+81332986 None:intergenic
GAAATTTCTTGAACGATAAT+TGG 0.114312 3_1:+81335980 None:intergenic
ACTTCATTTGAGATAAATTT+TGG 0.124987 3_1:+81336040 None:intergenic
CTGAGCAGCACTTTCTGTTT+TGG 0.144705 3_1:+81336237 None:intergenic
AGTTTCTGAAGTTCATATTT+TGG 0.182803 3_1:-81331672 Msa0379890:CDS
AGCTGTCTTAATTCTCTTTA+TGG 0.196588 3_1:-81328714 Msa0379890:three_prime_UTR
TTGTGTCCGCAGACTATTTC+AGG 0.208232 3_1:-81331695 Msa0379890:intron
TCTGGCCTTGCCTTTGAAAT+AGG 0.222999 3_1:-81337562 Msa0379890:intron
TTTATTCAGGGATACATATT+AGG 0.237635 3_1:-81333285 Msa0379890:intron
CTTCCCTTTGTACTAGAAAC+TGG 0.261645 3_1:-81337721 Msa0379890:CDS
CATATTTCCTCGGTGCCTAT+TGG 0.263879 3_1:-81329792 Msa0379890:CDS
CTCCAAGAGTATATATATAA+AGG 0.272621 3_1:-81328620 Msa0379890:three_prime_UTR
TGTGGCCTCAAGATCAAATT+TGG 0.274400 3_1:+81337023 None:intergenic
ACAATGCTCATCAATTTCTT+AGG 0.313187 3_1:-81336192 Msa0379890:CDS
AGGGAACCAGGGTGAGAAAA+AGG 0.314860 3_1:-81328600 Msa0379890:three_prime_UTR
CGCAATTTCACACGACTTGT+AGG 0.316748 3_1:+81328675 None:intergenic
CCTCTCTTGCTTTGGTTAAC+CGG 0.319336 3_1:-81337607 Msa0379890:CDS
GTAAGAGAAGAAGTAAAGAT+AGG 0.320146 3_1:+81331572 None:intergenic
TTCAGGGAAGTATAGGAAAA+TGG 0.324426 3_1:-81329593 Msa0379890:intron
TAATTCTCTTTATGGCATAT+TGG 0.332579 3_1:-81328706 Msa0379890:three_prime_UTR
GAAAACAAGAAACTCTAAAA+TGG 0.340331 3_1:-81337920 Msa0379890:exon
CATAAGGCTTACCTCTTGAT+AGG 0.346287 3_1:+81332954 None:intergenic
CTCCTACCATTGGCTTCCAT+TGG 0.356938 3_1:+81331620 None:intergenic
GGCAAACCAAACTCGCATTT+CGG 0.357922 3_1:+81331647 None:intergenic
ACTATTCCATCGTTGATGAT+TGG 0.363016 3_1:-81329271 Msa0379890:CDS
CCTGGTTGCTCTGCTTTCTC+TGG 0.363794 3_1:-81337580 Msa0379890:CDS
AACAAGATCCTCTCTTGCTT+TGG 0.366863 3_1:-81337615 Msa0379890:CDS
AATATTGTAAAATTCCTTCC+TGG 0.368687 3_1:-81337757 Msa0379890:CDS
TTGGAACCGAAATGCGAGTT+TGG 0.377727 3_1:-81331653 Msa0379890:CDS
AGCAAGAGAGGATCTTGTTT+AGG 0.379525 3_1:+81337619 None:intergenic
AATATAGGAGCAAGTTCATT+TGG 0.380072 3_1:-81328833 Msa0379890:three_prime_UTR
ATCATAATTAGTAATAATAT+AGG 0.381562 3_1:-81328848 Msa0379890:three_prime_UTR
TGATCTTGAGGCCACATTCA+TGG 0.386096 3_1:-81337016 Msa0379890:CDS
ATTAGCGTCGTTGGCCCAAT+AGG 0.389162 3_1:+81329777 None:intergenic
TCCCTTTATATATATACTCT+TGG 0.390301 3_1:+81328618 None:intergenic
GTTATCGTTCATTAATATAC+AGG 0.393033 3_1:-81329491 Msa0379890:intron
TTGGATTTGCCTGTGGGTAC+TGG 0.395039 3_1:-81336271 Msa0379890:CDS
TCGTGAGCTGGCCAAGTTAC+GGG 0.395449 3_1:+81333258 None:intergenic
TAGTAGAAGTGTAGAACTTT+TGG 0.398021 3_1:-81328746 Msa0379890:three_prime_UTR
CCATTGGCTTCCATTGGATT+AGG 0.401839 3_1:+81331626 None:intergenic
AAATTTCTTGAACGATAATT+GGG 0.406294 3_1:+81335981 None:intergenic
ATCGTTCAAGAAATTTCATA+TGG 0.418324 3_1:-81335974 Msa0379890:CDS
TCCTTTCTTGCAGGAAATGA+AGG 0.430756 3_1:-81335665 Msa0379890:intron
ATATTTCCTCGGTGCCTATT+GGG 0.431289 3_1:-81329791 Msa0379890:CDS
GCTAGTTTGCAGATAAGAAC+AGG 0.436196 3_1:-81338036 Msa0379890:five_prime_UTR
CTTTGGTTAACCGGTGGTCC+TGG 0.437882 3_1:-81337598 Msa0379890:CDS
TCCAAGAGTATATATATAAA+GGG 0.437908 3_1:-81328619 Msa0379890:three_prime_UTR
AAATCACATATACAATGGTA+TGG 0.445331 3_1:+81328541 None:intergenic
TTTGCAATTCAGGGAAGTAT+AGG 0.446212 3_1:-81329600 Msa0379890:intron
CATGTAAATCTTAGCAGAAA+AGG 0.457089 3_1:-81329513 Msa0379890:CDS
TAAGAGAAGAAGTAAAGATA+GGG 0.473636 3_1:+81331573 None:intergenic
TAGTGTCATAGGCTAGGAAT+AGG 0.477878 3_1:+81328767 None:intergenic
TACCCAGTTTCTAGTACAAA+GGG 0.479463 3_1:+81337718 None:intergenic
CATTGCCACCTTTATACTGT+CGG 0.480704 3_1:-81331550 Msa0379890:CDS
GCATTCTTCACGTTTGTACT+CGG 0.481386 3_1:+81328962 None:intergenic
GGCTTACCTCTTGATAGGAC+TGG 0.482837 3_1:+81332959 None:intergenic
TATTCTAATTCTCAAGTAGC+AGG 0.482956 3_1:-81329239 Msa0379890:CDS
TACAGAATAGCATTTAATCA+TGG 0.484071 3_1:-81333228 Msa0379890:CDS
TCAAATGAAGTGTACATTGC+TGG 0.486070 3_1:-81336028 Msa0379890:CDS
ATTGCCACCTTTATACTGTC+GGG 0.488453 3_1:-81331549 Msa0379890:intron
ATTGCTGGTGACTCATACTC+AGG 0.491300 3_1:-81336013 Msa0379890:CDS
GAAGTTACCCGACAGTATAA+AGG 0.492788 3_1:+81331542 None:intergenic
ACACAAGGACTTACTCGAAT+CGG 0.495879 3_1:-81329124 Msa0379890:CDS
TATTAGGAAATCCCGTAACT+TGG 0.496027 3_1:-81333269 Msa0379890:CDS
CATTCTTCACGTTTGTACTC+GGG 0.496306 3_1:+81328963 None:intergenic
ATCGTGAGCTGGCCAAGTTA+CGG 0.497789 3_1:+81333257 None:intergenic
ATAGTTCTTACCTATTTCAA+AGG 0.504314 3_1:+81337552 None:intergenic
AGAAACTGGGTACGTAGGAG+TGG 0.511170 3_1:-81337707 Msa0379890:CDS
TGCTCATCAATTTCTTAGGA+AGG 0.511515 3_1:-81336188 Msa0379890:intron
GGTACCATGCTCACAATGAC+TGG 0.518843 3_1:-81335953 Msa0379890:intron
GTGCTGCTCAGCAAAGCACT+TGG 0.520133 3_1:-81336225 Msa0379890:CDS
ATTCCATCGTTGATGATTGG+AGG 0.525726 3_1:-81329268 Msa0379890:CDS
ACTCTAAAATGGCAATGCTT+AGG 0.528452 3_1:-81337909 Msa0379890:exon
GTACCCAGTTTCTAGTACAA+AGG 0.533261 3_1:+81337717 None:intergenic
ATGAAGGTGGTCTTCAACCG+TGG 0.533420 3_1:-81335649 Msa0379890:CDS
GTTTGGTTTGCCTAATCCAA+TGG 0.534905 3_1:-81331636 Msa0379890:CDS
CTACAAGTCGTGTGAAATTG+CGG 0.534935 3_1:-81328674 Msa0379890:three_prime_UTR
TAAATGTATATAGTGGCTCA+TGG 0.536212 3_1:-81336068 Msa0379890:intron
TACACTTCTACTAGTGTCAT+AGG 0.536966 3_1:+81328756 None:intergenic
AAGAAGTCTCCTCCTACCAT+TGG 0.539846 3_1:+81331610 None:intergenic
TCATCATGTTGAACTCAGCT+TGG 0.541098 3_1:+81328882 None:intergenic
GCTTACCAAATTTGATCTTG+AGG 0.543670 3_1:-81337028 Msa0379890:CDS
TCTTACCTATTTCAAAGGCA+AGG 0.544344 3_1:+81337557 None:intergenic
TCAACCGTGGATAAACCTCC+AGG 0.544639 3_1:-81335636 Msa0379890:intron
AATAGCATTTAATCATGGCA+TGG 0.545622 3_1:-81333223 Msa0379890:CDS
TTCTTGAACGATAATTGGGA+CGG 0.547761 3_1:+81335985 None:intergenic
CCAGAGAAAGCAGAGCAACC+AGG 0.549843 3_1:+81337580 None:intergenic
TATATAAAATTACAGGGAGG+AGG 0.552360 3_1:-81328996 Msa0379890:intron
GCATTAATTAATTCCTAGAG+TGG 0.553204 3_1:+81328906 None:intergenic
ATGGTGAACATTAGCGTCGT+TGG 0.556529 3_1:+81329768 None:intergenic
AATCACATATACAATGGTAT+GGG 0.557537 3_1:+81328542 None:intergenic
GATATCTAATTACCCACTCT+AGG 0.558407 3_1:-81328919 Msa0379890:exon
GTATATATATAAAGGGAACC+AGG 0.560088 3_1:-81328612 Msa0379890:three_prime_UTR
GTTATATCGTGAGAAGAAAG+TGG 0.561064 3_1:+81328792 None:intergenic
TCTTGAACGATAATTGGGAC+GGG 0.561378 3_1:+81335986 None:intergenic
AGCAGAGCAACCAGGACCAC+CGG 0.561403 3_1:+81337588 None:intergenic
GGAAGGGGTCCTTGAAAACC+AGG 0.563915 3_1:+81337739 None:intergenic
AGTTTCTAGTACAAAGGGAA+GGG 0.571335 3_1:+81337723 None:intergenic
TTGACCAGTCATTGTGAGCA+TGG 0.576453 3_1:+81335949 None:intergenic
ATAGCATTTAATCATGGCAT+GGG 0.578505 3_1:-81333222 Msa0379890:CDS
TCAACCTTTGTCCATGAATG+TGG 0.581164 3_1:+81337005 None:intergenic
TTCCCTTTGTACTAGAAACT+GGG 0.581465 3_1:-81337720 Msa0379890:CDS
CTCTTGCTTTGGTTAACCGG+TGG 0.584289 3_1:-81337604 Msa0379890:CDS
TATTATAATCATCTTAAACA+AGG 0.586583 3_1:+81337846 None:intergenic
TCGTTGATGATTGGAGGCAG+TGG 0.586723 3_1:-81329262 Msa0379890:CDS
CTGTAATTATCATCGTGAGC+TGG 0.588096 3_1:+81333246 None:intergenic
TTTCTTGCAGGAAATGAAGG+TGG 0.589166 3_1:-81335662 Msa0379890:intron
ATTACAGGGAGGAGGACATA+CGG 0.590098 3_1:-81328988 Msa0379890:intron
AGAAGAAGTAAAGATAGGGT+TGG 0.591023 3_1:+81331577 None:intergenic
CAGACTCATGCATATTTCCT+CGG 0.595461 3_1:-81329802 Msa0379890:CDS
TTCTACTAGTGTCATAGGCT+AGG 0.596512 3_1:+81328761 None:intergenic
CCGGTTAACCAAAGCAAGAG+AGG 0.598944 3_1:+81337607 None:intergenic
CAATGGAAGCCAATGGTAGG+AGG 0.599561 3_1:-81331619 Msa0379890:CDS
AATGCTTAGCCATGTTCAGT+AGG 0.600787 3_1:-81328944 Msa0379890:CDS
GTTTCTAGTACAAAGGGAAG+GGG 0.605701 3_1:+81337724 None:intergenic
GATGACATTTGCAACTGTGA+AGG 0.605807 3_1:-81329102 Msa0379890:intron
CCATGCACTGCACATTCGAA+AGG 0.610749 3_1:-81329749 Msa0379890:intron
CAGTTTCTAGTACAAAGGGA+AGG 0.613885 3_1:+81337722 None:intergenic
GCTTAGCCATGTTCAGTAGG+TGG 0.616283 3_1:-81328941 Msa0379890:CDS
AGATATCCACCTACTGAACA+TGG 0.617483 3_1:+81328935 None:intergenic
TCAAAATTAATAATAGCACT+AGG 0.619335 3_1:-81337983 Msa0379890:five_prime_UTR
AGACATCCAGTCCTATCAAG+AGG 0.620187 3_1:-81332965 Msa0379890:intron
ATAAGAACAGGGAAGAGAAG+TGG 0.620377 3_1:-81337953 Msa0379890:five_prime_UTR
CATTAATTAATTCCTAGAGT+GGG 0.623797 3_1:+81328907 None:intergenic
GAGGCCACATTCATGGACAA+AGG 0.632336 3_1:-81337009 Msa0379890:intron
TATATATATAAAGGGAACCA+GGG 0.632460 3_1:-81328611 Msa0379890:three_prime_UTR
TAAGAGAATCCAGTACCCAC+AGG 0.632578 3_1:+81336262 None:intergenic
CCTAATCCAATGGAAGCCAA+TGG 0.635822 3_1:-81331626 Msa0379890:CDS
ATTCTAATTCTCAAGTAGCA+GGG 0.636518 3_1:-81329238 Msa0379890:intron
CGAACCTGGAGGTTTATCCA+CGG 0.642252 3_1:+81335632 None:intergenic
GTACTAGAAACTGGGTACGT+AGG 0.643362 3_1:-81337712 Msa0379890:CDS
GAAACTGGGTACGTAGGAGT+GGG 0.646265 3_1:-81337706 Msa0379890:CDS
CTGCCTCCAATCATCAACGA+TGG 0.650091 3_1:+81329265 None:intergenic
TCATTGCAAAAGAACTGTAG+AGG 0.651663 3_1:-81333030 Msa0379890:CDS
GAGGAGACTTCTTATTCACA+AGG 0.651795 3_1:-81331600 Msa0379890:CDS
CCTTTCGAATGTGCAGTGCA+TGG 0.658367 3_1:+81329749 None:intergenic
ATCCAATGGAAGCCAATGGT+AGG 0.665646 3_1:-81331622 Msa0379890:CDS
AACAGGGAAGAGAAGTGGTG+TGG 0.668685 3_1:-81337948 Msa0379890:five_prime_UTR
TGTTCTTATCTGCAAACTAG+CGG 0.669143 3_1:+81338038 None:intergenic
CTAGTTTGCAGATAAGAACA+GGG 0.671324 3_1:-81338035 Msa0379890:five_prime_UTR
TGAAACAGATGAAACTGCCG+CGG 0.677338 3_1:-81337677 Msa0379890:CDS
GTTACCCGACAGTATAAAGG+TGG 0.678423 3_1:+81331545 None:intergenic
GGGGTCCTTGAAAACCAGGA+AGG 0.688533 3_1:+81337743 None:intergenic
ATATTCTTGATAGATACACA+AGG 0.707905 3_1:-81329139 Msa0379890:intron
AAAATAGTAGAACAATTCCG+CGG 0.712968 3_1:+81337660 None:intergenic
TATTTCTAATGAACTCTACG+AGG 0.724262 3_1:-81333196 Msa0379890:intron
CGTTGGCCCAATAGGCACCG+AGG 0.737081 3_1:+81329785 None:intergenic
AGGCATAGTTCACATCACAG+TGG 0.792537 3_1:-81337889 Msa0379890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAAAAAAAATAAAAATT+TGG + chr3_1:81334763-81334782 None:intergenic 0.0%
!!! AAAAACACTTTTTAAATTTT+TGG + chr3_1:81329196-81329215 None:intergenic 10.0%
!! AATAATACTTATTAAACTAA+AGG + chr3_1:81329285-81329304 None:intergenic 10.0%
!! TACCTTAATTATTAAATTTA+TGG - chr3_1:81330209-81330228 Msa0379890:intron 10.0%
!! GATAAAAAATATGAAAAATT+AGG - chr3_1:81330998-81331017 Msa0379890:intron 10.0%
!!! ATATGATTTTGATATATATT+CGG + chr3_1:81331563-81331582 None:intergenic 10.0%
!!! ATATTTTCTTCAAAAAAAAA+AGG - chr3_1:81331819-81331838 Msa0379890:intron 10.0%
!!! TCTATTTTATACTTTTTTTT+CGG + chr3_1:81332052-81332071 None:intergenic 10.0%
!!! AAAAAAAAGTATAAAATAGA+AGG - chr3_1:81332052-81332071 Msa0379890:intron 10.0%
!!! TATTTTCTTCAAAATAAAAA+AGG - chr3_1:81332105-81332124 Msa0379890:intron 10.0%
!! TATAAAAAATTATCAAACTT+GGG + chr3_1:81332454-81332473 None:intergenic 10.0%
!! TTATAAAAAATTATCAAACT+TGG + chr3_1:81332455-81332474 None:intergenic 10.0%
!!! AGATTATTTTTATGTAAAAA+CGG - chr3_1:81333792-81333811 Msa0379890:intron 10.0%
!! TTAAAATGTTATTATAAAGT+TGG - chr3_1:81334002-81334021 Msa0379890:intron 10.0%
!! AATTTATTATTAGAGTTTAA+TGG - chr3_1:81335017-81335036 Msa0379890:intron 10.0%
!! AAATTTGAGAAATTAATTAT+AGG + chr3_1:81335843-81335862 None:intergenic 10.0%
!! TAAAATTAAATGATCAAAAT+TGG - chr3_1:81336594-81336613 Msa0379890:intron 10.0%
!!! TTGTTTTTTTTTTTTTTTCA+TGG - chr3_1:81336703-81336722 Msa0379890:intron 10.0%
!!! TTTTTGTTTTTAATATAATC+TGG - chr3_1:81337123-81337142 Msa0379890:intron 10.0%
!! ATCATAATTAGTAATAATAT+AGG - chr3_1:81337680-81337699 Msa0379890:CDS 10.0%
!! TATTATAATCATCTTAAACA+AGG + chr3_1:81328685-81328704 None:intergenic 15.0%
!! CACCATAAATTTAATAATTA+AGG + chr3_1:81330214-81330233 None:intergenic 15.0%
!! CTTAATTATTAAATTTATGG+TGG - chr3_1:81330212-81330231 Msa0379890:intron 15.0%
!!! GGTAAGTAATATTATATTTT+TGG - chr3_1:81330238-81330257 Msa0379890:intron 15.0%
!!! TTACCGTTTTTTTTAATATA+TGG - chr3_1:81330684-81330703 Msa0379890:intron 15.0%
!! AGTCCATATATTAAAAAAAA+CGG + chr3_1:81330690-81330709 None:intergenic 15.0%
!!! ATTTTTCATATTTTTTATCC+CGG + chr3_1:81330997-81331016 None:intergenic 15.0%
!!! TTTTTTTTTTTGTTAAAGTG+TGG + chr3_1:81331184-81331203 None:intergenic 15.0%
!!! TTAAATCCTTTTTATTTTGT+TGG + chr3_1:81331307-81331326 None:intergenic 15.0%
!!! ATGTGAGATATTATTTTTTT+AGG - chr3_1:81331638-81331657 Msa0379890:CDS 15.0%
!! CGTAACAAAATTAATAAATA+AGG - chr3_1:81331963-81331982 Msa0379890:intron 15.0%
!! AAATAAGGATGTAAAAAAAA+AGG - chr3_1:81331978-81331997 Msa0379890:intron 15.0%
!!! TTTTACACTCTTTTTTTTTT+TGG + chr3_1:81332022-81332041 None:intergenic 15.0%
!!! TTTTTTAAATGGAATTTGTT+AGG - chr3_1:81332163-81332182 Msa0379890:intron 15.0%
!! CGTAACAAAATTAATAAATA+AGG - chr3_1:81331963-81331982 Msa0379890:intron 15.0%
!! TTAAATATATATAGTTCAGA+TGG - chr3_1:81332346-81332365 Msa0379890:intron 15.0%
!!! TAAAATAATCATTTAGAATC+CGG - chr3_1:81332472-81332491 Msa0379890:intron 15.0%
!! TAGATCAATAACATTAAATA+TGG + chr3_1:81333017-81333036 None:intergenic 15.0%
!!! ATTAAAATCCTTTTTATTCA+GGG - chr3_1:81333231-81333250 Msa0379890:CDS 15.0%
!!! AAAGAAAAGCTATATTTTTA+TGG + chr3_1:81333732-81333751 None:intergenic 15.0%
!! ATTTATGAATCAACTTAAAA+AGG - chr3_1:81333886-81333905 Msa0379890:intron 15.0%
!!! TATTTTAAATTGCACAATTT+TGG + chr3_1:81334363-81334382 None:intergenic 15.0%
!!! AAAATTGTGCAATTTAAAAT+AGG - chr3_1:81334362-81334381 Msa0379890:intron 15.0%
!!! GATTGTTTAAAATTTAAAAG+CGG + chr3_1:81335374-81335393 None:intergenic 15.0%
!! ATGTATTAAAGATATTGTTT+CGG - chr3_1:81335864-81335883 Msa0379890:intron 15.0%
!!! TTTTTTTTTGTTGGTAATAT+CGG + chr3_1:81336307-81336326 None:intergenic 15.0%
!!! CTCTATATTTTTTTTTTTGT+TGG + chr3_1:81336316-81336335 None:intergenic 15.0%
!!! TCTCTATATTTAATTTTTGT+TGG + chr3_1:81336433-81336452 None:intergenic 15.0%
!!! TCGATTAATTTTTTTTTTGA+GGG + chr3_1:81336678-81336697 None:intergenic 15.0%
!!! ATCGATTAATTTTTTTTTTG+AGG + chr3_1:81336679-81336698 None:intergenic 15.0%
!!! ACTAAATATACCTTTTTTTA+AGG + chr3_1:81336847-81336866 None:intergenic 15.0%
!! ATATATAGATATACATAAAC+AGG + chr3_1:81337491-81337510 None:intergenic 15.0%
!! GTAATGTATATAAAATTACA+GGG - chr3_1:81337526-81337545 Msa0379890:intron 15.0%
!! TCAAAATTAATAATAGCACT+AGG - chr3_1:81328545-81328564 Msa0379890:three_prime_UTR 20.0%
!! TTATAACAAAAAAGAGTTTG+AGG - chr3_1:81329062-81329081 Msa0379890:intron 20.0%
!!! TTAAATTTTTGGTGCATTAA+CGG + chr3_1:81329185-81329204 None:intergenic 20.0%
!!! TTGGTTATATTTGCTATTTT+AGG - chr3_1:81329341-81329360 Msa0379890:intron 20.0%
!! TCCAATAACATTTAAAAATG+AGG - chr3_1:81329465-81329484 Msa0379890:intron 20.0%
!!! TCCTCATTTTTAAATGTTAT+TGG + chr3_1:81329469-81329488 None:intergenic 20.0%
!! TTTAAAAATGAGGAATACAA+CGG - chr3_1:81329475-81329494 Msa0379890:intron 20.0%
!!! TGGTTTTTTTGTTTGATAAA+TGG - chr3_1:81329585-81329604 Msa0379890:CDS 20.0%
!!! ATGATTTTATCTCATTTCAA+TGG + chr3_1:81329645-81329664 None:intergenic 20.0%
!!! TGAAAAGAATATTATGGTTT+TGG + chr3_1:81329732-81329751 None:intergenic 20.0%
!! ACAACATGAAAAGAATATTA+TGG + chr3_1:81329738-81329757 None:intergenic 20.0%
!!! AGAAACAATATTCTTTTTAG+CGG + chr3_1:81329790-81329809 None:intergenic 20.0%
!! GACAATACATAATATATGTA+AGG - chr3_1:81329853-81329872 Msa0379890:intron 20.0%
!! TTGTCTTTAAATGTATATAG+TGG - chr3_1:81330453-81330472 Msa0379890:intron 20.0%
!!! ACTTCATTTGAGATAAATTT+TGG + chr3_1:81330491-81330510 None:intergenic 20.0%
!! AAATTTCTTGAACGATAATT+GGG + chr3_1:81330550-81330569 None:intergenic 20.0%
!! ATACAGTAAAAAATAAAAGC+AGG - chr3_1:81330760-81330779 Msa0379890:intron 20.0%
!! TTGTCAACAAAAAAAAAAGA+TGG + chr3_1:81330950-81330969 None:intergenic 20.0%
!! TGAAAAATTAGGAATGAAAA+TGG - chr3_1:81331009-81331028 Msa0379890:intron 20.0%
!! ATTTAGCCAACAAAATAAAA+AGG - chr3_1:81331298-81331317 Msa0379890:intron 20.0%
!!! GACTTTTTTTTATAAAGACT+GGG + chr3_1:81331458-81331477 None:intergenic 20.0%
!!! TGACTTTTTTTTATAAAGAC+TGG + chr3_1:81331459-81331478 None:intergenic 20.0%
!! CATTAACAAGAAAAACTAAA+TGG - chr3_1:81331586-81331605 Msa0379890:CDS 20.0%
!! TGTTGAAAAATTAATGTATG+TGG - chr3_1:81333100-81333119 Msa0379890:intron 20.0%
!! ACAAAAATGTTAGTTAAAAG+TGG + chr3_1:81333138-81333157 None:intergenic 20.0%
!!! GATTAAAATCCTTTTTATTC+AGG - chr3_1:81333230-81333249 Msa0379890:CDS 20.0%
!!! TTTATTTGTTGAATTCTGAA+TGG - chr3_1:81333439-81333458 Msa0379890:intron 20.0%
!!! TTCTAGACAAAATACATTTT+GGG + chr3_1:81333544-81333563 None:intergenic 20.0%
!! TGTATTTGATATGATTTGAT+TGG + chr3_1:81333848-81333867 None:intergenic 20.0%
!! AAATTAAATCCTATAGCAAA+TGG - chr3_1:81333971-81333990 Msa0379890:intron 20.0%
!!! GCAATTTTGATATCTTATTT+TGG - chr3_1:81334032-81334051 Msa0379890:intron 20.0%
!!! TTTGGTCTCATATTTTTTTT+TGG - chr3_1:81334067-81334086 Msa0379890:intron 20.0%
!!! ATATTTTTTTTTGGCACAAA+AGG - chr3_1:81334076-81334095 Msa0379890:intron 20.0%
!!! GATCAATTTCTTTGAAATTA+TGG + chr3_1:81334131-81334150 None:intergenic 20.0%
!! ATACAAACTCAAAATAAGAT+CGG - chr3_1:81334276-81334295 Msa0379890:intron 20.0%
!! TTTATTGATGAAATTGATTG+AGG - chr3_1:81334513-81334532 Msa0379890:intron 20.0%
!!! TTTAATAAGTGCTTTTCAAT+AGG + chr3_1:81334566-81334585 None:intergenic 20.0%
!!! AAATGATTTTTTAGACACAA+TGG - chr3_1:81334632-81334651 Msa0379890:intron 20.0%
!!! TATATTGAATTTTTCCTAAG+TGG - chr3_1:81334796-81334815 Msa0379890:intron 20.0%
!!! ATATTGAATTTTTCCTAAGT+GGG - chr3_1:81334797-81334816 Msa0379890:intron 20.0%
!!! TAATACTGAAATGGATTTAT+AGG + chr3_1:81335190-81335209 None:intergenic 20.0%
!! ATAAATCCATTTCAGTATTA+TGG - chr3_1:81335190-81335209 Msa0379890:intron 20.0%
!! AATATTCCATAGACTAAAAT+GGG + chr3_1:81335223-81335242 None:intergenic 20.0%
!! AAAAAAATGAGGGAAAATTA+TGG + chr3_1:81335301-81335320 None:intergenic 20.0%
!!! TTTTAAACAATCACAATGAT+TGG - chr3_1:81335382-81335401 Msa0379890:intron 20.0%
!!! ATTTTTTGTCCTTTGTAAAA+AGG + chr3_1:81335965-81335984 None:intergenic 20.0%
!!! GTTTTAAAATATTACACAAG+CGG + chr3_1:81336281-81336300 None:intergenic 20.0%
!!! CGATTAATTTTTTTTTTGAG+GGG + chr3_1:81336677-81336696 None:intergenic 20.0%
!! AGGTATATTTCCTTAAAAAA+AGG - chr3_1:81336834-81336853 Msa0379890:intron 20.0%
!! CGTAATGTATATAAAATTAC+AGG - chr3_1:81337525-81337544 Msa0379890:intron 20.0%
!!! TCCAAGAGTATATATATAAA+GGG - chr3_1:81337909-81337928 Msa0379890:exon 20.0%
!! ATGAAAAATCACATATACAA+TGG + chr3_1:81337995-81338014 None:intergenic 20.0%
!!! GTGCTATTATTAATTTTGAG+TGG + chr3_1:81328544-81328563 None:intergenic 25.0%
!! GAAAACAAGAAACTCTAAAA+TGG - chr3_1:81328608-81328627 Msa0379890:three_prime_UTR 25.0%
!! TGGATGAATTTTGTAACAAT+AGG + chr3_1:81328722-81328741 None:intergenic 25.0%
!! AGGAAGGAATTTTACAATAT+TGG + chr3_1:81328772-81328791 None:intergenic 25.0%
! AATATTGTAAAATTCCTTCC+TGG - chr3_1:81328771-81328790 Msa0379890:three_prime_UTR 25.0%
! ATAGTTCTTACCTATTTCAA+AGG + chr3_1:81328979-81328998 None:intergenic 25.0%
!!! GGTTTGTTAGAATTAGTTTA+AGG - chr3_1:81329083-81329102 Msa0379890:intron 25.0%
!! TTAAAGATAAGTATTGTTGC+AGG - chr3_1:81329442-81329461 Msa0379890:intron 25.0%
! TTAAAAATGAGGAATACAAC+GGG - chr3_1:81329476-81329495 Msa0379890:intron 25.0%
! TGTTGAATCTATACTTTATG+TGG - chr3_1:81329565-81329584 Msa0379890:CDS 25.0%
!! AGCTTATTGATTAGAGTATA+AGG - chr3_1:81329608-81329627 Msa0379890:intron 25.0%
!! GCTTATTGATTAGAGTATAA+GGG - chr3_1:81329609-81329628 Msa0379890:intron 25.0%
! CATAATATATGTAAGGTATG+AGG - chr3_1:81329860-81329879 Msa0379890:intron 25.0%
!!! CTTTTTTTTTTTTGTGGCTA+AGG + chr3_1:81329892-81329911 None:intergenic 25.0%
!!! GTCTCACTTTTTTTTTTTTG+TGG + chr3_1:81329898-81329917 None:intergenic 25.0%
!!! TTTAGGTTTTTTCCTTTCAT+TGG - chr3_1:81329925-81329944 Msa0379890:intron 25.0%
! ATTTGGAAGGATATTTATCA+TGG + chr3_1:81330011-81330030 None:intergenic 25.0%
! TAAAGTTAAGGAAATTTGGA+AGG + chr3_1:81330024-81330043 None:intergenic 25.0%
!! TAATGACGTTACTTTATCAA+AGG - chr3_1:81330121-81330140 Msa0379890:intron 25.0%
!!! TTATTAAATTTATGGTGGAC+AGG - chr3_1:81330217-81330236 Msa0379890:intron 25.0%
! TCTTTAATTCCAAACTCAAA+TGG + chr3_1:81330422-81330441 None:intergenic 25.0%
! GAAATTTCTTGAACGATAAT+TGG + chr3_1:81330551-81330570 None:intergenic 25.0%
! ATCGTTCAAGAAATTTCATA+TGG - chr3_1:81330554-81330573 Msa0379890:intron 25.0%
! AATGAAAATGGATATCCTTT+AGG - chr3_1:81331021-81331040 Msa0379890:intron 25.0%
!! TTTTTATTAACGTGGACTTA+AGG + chr3_1:81331067-81331086 None:intergenic 25.0%
!! TTTTGTTAAAGTGTGGAAAA+TGG + chr3_1:81331177-81331196 None:intergenic 25.0%
!!! ACTATCAATGTTTTAAAACC+CGG - chr3_1:81331347-81331366 Msa0379890:intron 25.0%
! CTTCAAAAAAAAAAGGCAAA+CGG - chr3_1:81331826-81331845 Msa0379890:intron 25.0%
!! TTTCTTAGATGGAATTTGTT+AGG - chr3_1:81331877-81331896 Msa0379890:intron 25.0%
! TTCAAAATAAAAAAGGCAAG+CGG - chr3_1:81332112-81332131 Msa0379890:intron 25.0%
!!! GTGCAATGCATTTTTTTAAA+TGG - chr3_1:81332152-81332171 Msa0379890:intron 25.0%
!!! ATATGCAGTGTTTTAAAATC+CGG + chr3_1:81332659-81332678 None:intergenic 25.0%
! TGTTGCTCAAAATAATTCTA+GGG + chr3_1:81332941-81332960 None:intergenic 25.0%
! ATGTTGCTCAAAATAATTCT+AGG + chr3_1:81332942-81332961 None:intergenic 25.0%
! AAATTTATCTACTCTCTCTA+AGG + chr3_1:81333166-81333185 None:intergenic 25.0%
! AGAGAGTAGATAAATTTAAG+AGG - chr3_1:81333169-81333188 Msa0379890:intron 25.0%
! GAGAGTAGATAAATTTAAGA+GGG - chr3_1:81333170-81333189 Msa0379890:intron 25.0%
! ATATGTATCCCTGAATAAAA+AGG + chr3_1:81333242-81333261 None:intergenic 25.0%
! TTTATTCAGGGATACATATT+AGG - chr3_1:81333243-81333262 Msa0379890:CDS 25.0%
! TACAGAATAGCATTTAATCA+TGG - chr3_1:81333300-81333319 Msa0379890:intron 25.0%
!! TCTAGACAAAATACATTTTG+GGG + chr3_1:81333543-81333562 None:intergenic 25.0%
!! CTTCTAGACAAAATACATTT+TGG + chr3_1:81333545-81333564 None:intergenic 25.0%
! AATTGTGCAATTAGACATAT+GGG + chr3_1:81334103-81334122 None:intergenic 25.0%
! AAATTGTGCAATTAGACATA+TGG + chr3_1:81334104-81334123 None:intergenic 25.0%
!! TATGTCTAATTGCACAATTT+TGG - chr3_1:81334104-81334123 Msa0379890:intron 25.0%
! AATAGGATGATCAAAATCAA+GGG + chr3_1:81334156-81334175 None:intergenic 25.0%
! AAATAGGATGATCAAAATCA+AGG + chr3_1:81334157-81334176 None:intergenic 25.0%
! TTATTGTCACACTATCAAAT+AGG + chr3_1:81334173-81334192 None:intergenic 25.0%
!!! AGTTTCTGAAGTTCATATTT+TGG - chr3_1:81334856-81334875 Msa0379890:intron 25.0%
! TAAGAGAAGAAGTAAAGATA+GGG + chr3_1:81334958-81334977 None:intergenic 25.0%
! TTTAAGCCATAATACTGAAA+TGG + chr3_1:81335199-81335218 None:intergenic 25.0%
!!! TTAAATCCCATTTTAGTCTA+TGG - chr3_1:81335214-81335233 Msa0379890:intron 25.0%
! CAATATTCCATAGACTAAAA+TGG + chr3_1:81335224-81335243 None:intergenic 25.0%
! ACGATATTTGAGGAAATTAA+TGG + chr3_1:81335330-81335349 None:intergenic 25.0%
!! TGTTTAAAATTTAAAAGCGG+AGG + chr3_1:81335371-81335390 None:intergenic 25.0%
! TTACTTCTATCAATTAACCA+TGG - chr3_1:81335584-81335603 Msa0379890:intron 25.0%
! TACAATCACAACATATTCAA+AGG - chr3_1:81335692-81335711 Msa0379890:intron 25.0%
! TACAAAGGACAAAAAATGTA+AGG - chr3_1:81335968-81335987 Msa0379890:CDS 25.0%
! ACAAAGGACAAAAAATGTAA+GGG - chr3_1:81335969-81335988 Msa0379890:CDS 25.0%
!! TTTAAAATATTACACAAGCG+CGG + chr3_1:81336279-81336298 None:intergenic 25.0%
! TGAAGTAAGTACTACTATAA+AGG - chr3_1:81336477-81336496 Msa0379890:intron 25.0%
! TTTGCATAAATTATAGTCGT+TGG + chr3_1:81336621-81336640 None:intergenic 25.0%
! GTTATCGTTCATTAATATAC+AGG - chr3_1:81337037-81337056 Msa0379890:CDS 25.0%
! AAATCGCACAACTAATTATT+TGG + chr3_1:81337149-81337168 None:intergenic 25.0%
!! AAGACAATTTTTGTTAACAG+TGG - chr3_1:81337178-81337197 Msa0379890:intron 25.0%
!! AGACAATTTTTGTTAACAGT+GGG - chr3_1:81337179-81337198 Msa0379890:intron 25.0%
! ATATTCTTGATAGATACACA+AGG - chr3_1:81337389-81337408 Msa0379890:intron 25.0%
! ATGTATATAAAATTACAGGG+AGG - chr3_1:81337529-81337548 Msa0379890:intron 25.0%
! CATTAATTAATTCCTAGAGT+GGG + chr3_1:81337624-81337643 None:intergenic 25.0%
! TAATTCTCTTTATGGCATAT+TGG - chr3_1:81337822-81337841 Msa0379890:CDS 25.0%
!! CTCCAAGAGTATATATATAA+AGG - chr3_1:81337908-81337927 Msa0379890:exon 25.0%
! TCCCTTTATATATATACTCT+TGG + chr3_1:81337913-81337932 None:intergenic 25.0%
! TATATATATAAAGGGAACCA+GGG - chr3_1:81337917-81337936 Msa0379890:exon 25.0%
! AATCACATATACAATGGTAT+GGG + chr3_1:81337989-81338008 None:intergenic 25.0%
! AAATCACATATACAATGGTA+TGG + chr3_1:81337990-81338009 None:intergenic 25.0%
! TAGGTTTTCAGATAAGAACA+GGG - chr3_1:81328564-81328583 Msa0379890:three_prime_UTR 30.0%
ATTGAGATGTTGCAAAAACA+AGG + chr3_1:81328749-81328768 None:intergenic 30.0%
AAAATAGTAGAACAATTCCG+CGG + chr3_1:81328871-81328890 None:intergenic 30.0%
ACATTCGATGGAAAAACATT+GGG + chr3_1:81329019-81329038 None:intergenic 30.0%
!! TATTCTTTTTAGCGGAAAAG+TGG + chr3_1:81329782-81329801 None:intergenic 30.0%
AACTTCTTGGAATATTTGGT+TGG + chr3_1:81329815-81329834 None:intergenic 30.0%
CAGTAACTTCTTGGAATATT+TGG + chr3_1:81329819-81329838 None:intergenic 30.0%
CAAATATTCCAAGAAGTTAC+TGG - chr3_1:81329817-81329836 Msa0379890:intron 30.0%
AAATATGACCAGTAACTTCT+TGG + chr3_1:81329828-81329847 None:intergenic 30.0%
! AAAGTGAGACACATTCTTTT+AGG - chr3_1:81329908-81329927 Msa0379890:intron 30.0%
GATATTTATCATGGCTCAAT+TGG + chr3_1:81330002-81330021 None:intergenic 30.0%
GTGCTAAAGTTAAGGAAATT+TGG + chr3_1:81330028-81330047 None:intergenic 30.0%
TTTCACTTGTGCTAAAGTTA+AGG + chr3_1:81330036-81330055 None:intergenic 30.0%
TAGCACAAGTGAAAAACATA+AGG - chr3_1:81330042-81330061 Msa0379890:intron 30.0%
! GTTTTGTGTGTTATGTTTTG+CGG + chr3_1:81330084-81330103 None:intergenic 30.0%
AAAGGTTCACTCATTTGTTT+CGG - chr3_1:81330139-81330158 Msa0379890:intron 30.0%
!!! TATATTTTTGGATTTGCCTG+TGG - chr3_1:81330250-81330269 Msa0379890:intron 30.0%
!!! ATATTTTTGGATTTGCCTGT+GGG - chr3_1:81330251-81330270 Msa0379890:intron 30.0%
ACAATGCTCATCAATTTCTT+AGG - chr3_1:81330336-81330355 Msa0379890:intron 30.0%
!! TTGATTTTGCCATTTGAGTT+TGG - chr3_1:81330410-81330429 Msa0379890:intron 30.0%
TAAATGTATATAGTGGCTCA+TGG - chr3_1:81330460-81330479 Msa0379890:intron 30.0%
CTGGTCAACAAAAATGTATT+AGG - chr3_1:81330594-81330613 Msa0379890:intron 30.0%
AAAATGGATATCCTTTAGGT+TGG - chr3_1:81331025-81331044 Msa0379890:intron 30.0%
! AAATGGATATCCTTTAGGTT+GGG - chr3_1:81331026-81331045 Msa0379890:intron 30.0%
! TACGGAACTTTTTATTAACG+TGG + chr3_1:81331075-81331094 None:intergenic 30.0%
CAAAATTATGGACTCAGATA+CGG + chr3_1:81331093-81331112 None:intergenic 30.0%
! TATCTGAGTCCATAATTTTG+TGG - chr3_1:81331093-81331112 Msa0379890:intron 30.0%
! ATCTGAGTCCATAATTTTGT+GGG - chr3_1:81331094-81331113 Msa0379890:intron 30.0%
AACTTATGCCCACAAAATTA+TGG + chr3_1:81331105-81331124 None:intergenic 30.0%
ACTTAGATGTTCGTAGTATA+CGG + chr3_1:81331140-81331159 None:intergenic 30.0%
TAGCATATCAATGATCTTAC+GGG + chr3_1:81331795-81331814 None:intergenic 30.0%
CTAGCATATCAATGATCTTA+CGG + chr3_1:81331796-81331815 None:intergenic 30.0%
AAAAAAAAAGGCAAACGGAT+AGG - chr3_1:81331831-81331850 Msa0379890:intron 30.0%
! GTGCAATGAATTTTCTTAGA+TGG - chr3_1:81331866-81331885 Msa0379890:intron 30.0%
AACCTAATAAAGCAAATGAG+CGG - chr3_1:81331913-81331932 Msa0379890:intron 30.0%
ATCATACGTGATCATTGATA+TGG - chr3_1:81332075-81332094 Msa0379890:intron 30.0%
AACCTAATAAAGCAAATGAG+CGG - chr3_1:81331913-81331932 Msa0379890:intron 30.0%
! ACTGAAACGTTTATTTCTCA+CGG + chr3_1:81332327-81332346 None:intergenic 30.0%
ATTATCAAACTTGGGTAAGT+GGG + chr3_1:81332446-81332465 None:intergenic 30.0%
AATTATCAAACTTGGGTAAG+TGG + chr3_1:81332447-81332466 None:intergenic 30.0%
CTACAAAAAAATACCTACGA+TGG + chr3_1:81332876-81332895 None:intergenic 30.0%
!!! CATCGTAGGTATTTTTTTGT+AGG - chr3_1:81332874-81332893 Msa0379890:intron 30.0%
!!! ATTTTTTTGTAGGTATCCAG+TGG - chr3_1:81332884-81332903 Msa0379890:intron 30.0%
!! TAATTCTAGGGTAGGAAATA+GGG + chr3_1:81332929-81332948 None:intergenic 30.0%
!! ATAATTCTAGGGTAGGAAAT+AGG + chr3_1:81332930-81332949 None:intergenic 30.0%
! TCAACACCTGTGTTATTAAA+GGG + chr3_1:81333086-81333105 None:intergenic 30.0%
! TTCAACACCTGTGTTATTAA+AGG + chr3_1:81333087-81333106 None:intergenic 30.0%
AATAGCATTTAATCATGGCA+TGG - chr3_1:81333305-81333324 Msa0379890:intron 30.0%
ATAGCATTTAATCATGGCAT+GGG - chr3_1:81333306-81333325 Msa0379890:intron 30.0%
! TATTTCTAATGAACTCTACG+AGG - chr3_1:81333332-81333351 Msa0379890:intron 30.0%
GAGACACAATGTTATTCATA+AGG + chr3_1:81333593-81333612 None:intergenic 30.0%
! TGCTTTTGTCATTCGATTTT+CGG - chr3_1:81333624-81333643 Msa0379890:intron 30.0%
!! ACTATGAATCCATTTGCTAT+AGG + chr3_1:81333983-81334002 None:intergenic 30.0%
AAAATATGAGACCAAAATCG+CGG + chr3_1:81334063-81334082 None:intergenic 30.0%
! AGACTCTTCATTTTCATGTT+AGG + chr3_1:81334205-81334224 None:intergenic 30.0%
GCTTAGAGTCTTAAAAAATG+AGG - chr3_1:81334229-81334248 Msa0379890:intron 30.0%
TTACGAGTGAAATCATAGAT+TGG - chr3_1:81334317-81334336 Msa0379890:intron 30.0%
GTAAGAGAAGAAGTAAAGAT+AGG + chr3_1:81334959-81334978 None:intergenic 30.0%
TATTAGAGTTTAATGGTCGT+AGG - chr3_1:81335024-81335043 Msa0379890:intron 30.0%
TACAGTAATGAGACAACAAA+TGG - chr3_1:81335137-81335156 Msa0379890:intron 30.0%
ACAGTAATGAGACAACAAAT+GGG - chr3_1:81335138-81335157 Msa0379890:intron 30.0%
! TTAGCAAAAAGTGCAAAAAG+AGG + chr3_1:81335270-81335289 None:intergenic 30.0%
!! TCTTTTTGCACTTTTTGCTA+AGG - chr3_1:81335269-81335288 Msa0379890:intron 30.0%
!! CTTTTTGCACTTTTTGCTAA+GGG - chr3_1:81335270-81335289 Msa0379890:intron 30.0%
!! TTTTTGCACTTTTTGCTAAG+GGG - chr3_1:81335271-81335290 Msa0379890:intron 30.0%
AAAATGAGGGAAAATTATGG+AGG + chr3_1:81335298-81335317 None:intergenic 30.0%
ATGGTGTGGAAAAAAAATGA+GGG + chr3_1:81335311-81335330 None:intergenic 30.0%
AATGGTGTGGAAAAAAAATG+AGG + chr3_1:81335312-81335331 None:intergenic 30.0%
ATTTGAGGAAATTAATGGTG+TGG + chr3_1:81335325-81335344 None:intergenic 30.0%
AATTACGATCACGATATTTG+AGG + chr3_1:81335340-81335359 None:intergenic 30.0%
CAATCACAATGATTGGAATT+TGG - chr3_1:81335389-81335408 Msa0379890:intron 30.0%
ACAATTAGTTGTTAGTTAGG+AGG + chr3_1:81335562-81335581 None:intergenic 30.0%
TCCTAACTAACAACTAATTG+TGG - chr3_1:81335561-81335580 Msa0379890:intron 30.0%
ACCACAATTAGTTGTTAGTT+AGG + chr3_1:81335565-81335584 None:intergenic 30.0%
AAGTTAACGTCAAGTTAACT+AGG + chr3_1:81335638-81335657 None:intergenic 30.0%
ATCACAACATATTCAAAGGT+AGG - chr3_1:81335696-81335715 Msa0379890:intron 30.0%
TCACAACATATTCAAAGGTA+GGG - chr3_1:81335697-81335716 Msa0379890:intron 30.0%
CCTAAATTCTCAAGTAATGT+GGG + chr3_1:81336167-81336186 None:intergenic 30.0%
ACCTAAATTCTCAAGTAATG+TGG + chr3_1:81336168-81336187 None:intergenic 30.0%
!! GCGCTTGTGTAATATTTTAA+AGG - chr3_1:81336392-81336411 Msa0379890:intron 30.0%
AGTACTACTATAAAGGACAT+TGG - chr3_1:81336484-81336503 Msa0379890:intron 30.0%
ACTATCAAGTAGTAGAATGA+AGG - chr3_1:81336548-81336567 Msa0379890:intron 30.0%
GGGGAACGATTAAATATTAT+TGG + chr3_1:81336658-81336677 None:intergenic 30.0%
TACTACTGTATTTGCAATTC+AGG - chr3_1:81336918-81336937 Msa0379890:intron 30.0%
ACTACTGTATTTGCAATTCA+GGG - chr3_1:81336919-81336938 Msa0379890:intron 30.0%
CATGTAAATCTTAGCAGAAA+AGG - chr3_1:81337015-81337034 Msa0379890:CDS 30.0%
! GACAATTTTTGTTAACAGTG+GGG - chr3_1:81337180-81337199 Msa0379890:intron 30.0%
! TGACATGAAAGTTCCATTTT+TGG - chr3_1:81337207-81337226 Msa0379890:intron 30.0%
TATTCTAATTCTCAAGTAGC+AGG - chr3_1:81337289-81337308 Msa0379890:intron 30.0%
ATTCTAATTCTCAAGTAGCA+GGG - chr3_1:81337290-81337309 Msa0379890:intron 30.0%
TATATAAAATTACAGGGAGG+AGG - chr3_1:81337532-81337551 Msa0379890:intron 30.0%
GCATTAATTAATTCCTAGAG+TGG + chr3_1:81337625-81337644 None:intergenic 30.0%
AATATAGGAGCAAGTTCATT+TGG - chr3_1:81337695-81337714 Msa0379890:CDS 30.0%
!! TAGTAGAAGTGTAGAACTTT+TGG - chr3_1:81337782-81337801 Msa0379890:CDS 30.0%
AGCTGTCTTAATTCTCTTTA+TGG - chr3_1:81337814-81337833 Msa0379890:CDS 30.0%
GTATATATATAAAGGGAACC+AGG - chr3_1:81337916-81337935 Msa0379890:exon 30.0%
TGTTCTTATCTGCAAACTAG+CGG + chr3_1:81328493-81328512 None:intergenic 35.0%
! CTAGTTTGCAGATAAGAACA+GGG - chr3_1:81328493-81328512 Msa0379890:three_prime_UTR 35.0%
! CTAGGTTTTCAGATAAGAAC+AGG - chr3_1:81328563-81328582 Msa0379890:three_prime_UTR 35.0%
!! ACTCTAAAATGGCAATGCTT+AGG - chr3_1:81328619-81328638 Msa0379890:three_prime_UTR 35.0%
AGATGTTGCAAAAACAAGGT+TGG + chr3_1:81328745-81328764 None:intergenic 35.0%
!! AAATTCCTTCCTGGTTTTCA+AGG - chr3_1:81328780-81328799 Msa0379890:three_prime_UTR 35.0%
!! AGTTTCTAGTACAAAGGGAA+GGG + chr3_1:81328808-81328827 None:intergenic 35.0%
TTCCCTTTGTACTAGAAACT+GGG - chr3_1:81328808-81328827 Msa0379890:three_prime_UTR 35.0%
!! TACCCAGTTTCTAGTACAAA+GGG + chr3_1:81328813-81328832 None:intergenic 35.0%
TCTTACCTATTTCAAAGGCA+AGG + chr3_1:81328974-81328993 None:intergenic 35.0%
CACATTCGATGGAAAAACAT+TGG + chr3_1:81329020-81329039 None:intergenic 35.0%
!!! CTTTTGACTTTCTTAACCAG+TGG - chr3_1:81329237-81329256 Msa0379890:intron 35.0%
AAACTAAAGGACATGCTAAC+CGG + chr3_1:81329272-81329291 None:intergenic 35.0%
!! CGTTCTGACTTGTTAATAGT+TGG - chr3_1:81329322-81329341 Msa0379890:CDS 35.0%
AAACAAAGATAAGCACTCAC+AGG - chr3_1:81329402-81329421 Msa0379890:intron 35.0%
GCTTACCAAATTTGATCTTG+AGG - chr3_1:81329500-81329519 Msa0379890:CDS 35.0%
TACATTTGACGACATTGCAA+TGG - chr3_1:81329664-81329683 Msa0379890:intron 35.0%
AAAAGTGGTGAATTTGAAGG+AGG + chr3_1:81329767-81329786 None:intergenic 35.0%
AATTGGTATCCAACATGTTG+GGG + chr3_1:81329985-81330004 None:intergenic 35.0%
CAATTGGTATCCAACATGTT+GGG + chr3_1:81329986-81330005 None:intergenic 35.0%
TCAATTGGTATCCAACATGT+TGG + chr3_1:81329987-81330006 None:intergenic 35.0%
! TGTGTTATGTTTTGCGGAAA+TGG + chr3_1:81330078-81330097 None:intergenic 35.0%
TGCTCATCAATTTCTTAGGA+AGG - chr3_1:81330340-81330359 Msa0379890:intron 35.0%
TCAAATGAAGTGTACATTGC+TGG - chr3_1:81330500-81330519 Msa0379890:intron 35.0%
TTCTTGAACGATAATTGGGA+CGG + chr3_1:81330546-81330565 None:intergenic 35.0%
CCTGCAAGAAAGGAAATTTA+TGG + chr3_1:81330857-81330876 None:intergenic 35.0%
CCATAAATTTCCTTTCTTGC+AGG - chr3_1:81330854-81330873 Msa0379890:intron 35.0%
!!! TTGTTTTAAATGTGCGAACC+TGG + chr3_1:81330913-81330932 None:intergenic 35.0%
TTTGCCATCTTGAAATTGAC+CGG - chr3_1:81330975-81330994 Msa0379890:intron 35.0%
TTAGATGTTCGTAGTATACG+GGG + chr3_1:81331138-81331157 None:intergenic 35.0%
CTTAGATGTTCGTAGTATAC+GGG + chr3_1:81331139-81331158 None:intergenic 35.0%
! TAAAGTGTGGAAAATGGACT+CGG + chr3_1:81331171-81331190 None:intergenic 35.0%
CAAACGGATAGGAATGAAAT+TGG - chr3_1:81331842-81331861 Msa0379890:intron 35.0%
ACCTAATAAAGCAAATGAGC+GGG - chr3_1:81331914-81331933 Msa0379890:intron 35.0%
CAAATGAGCGGGAAAAAATT+AGG - chr3_1:81331925-81331944 Msa0379890:intron 35.0%
AATAAAAAAGGCAAGCGGAT+AGG - chr3_1:81332117-81332136 Msa0379890:intron 35.0%
ACCTAATAAAGCAAATGAGC+GGG - chr3_1:81331914-81331933 Msa0379890:intron 35.0%
CAAATGAGCGGGAAAAAATT+AGG - chr3_1:81331925-81331944 Msa0379890:intron 35.0%
! TGAAACGTTTATTTCTCACG+GGG + chr3_1:81332325-81332344 None:intergenic 35.0%
! CTGAAACGTTTATTTCTCAC+GGG + chr3_1:81332326-81332345 None:intergenic 35.0%
! TAATCATTTAGAATCCGGTC+CGG - chr3_1:81332477-81332496 Msa0379890:intron 35.0%
!! TAATTACCCGCCATTTTGAA+CGG + chr3_1:81332811-81332830 None:intergenic 35.0%
ACATTGTTGGGTATGAGATT+GGG + chr3_1:81332840-81332859 None:intergenic 35.0%
AAAAAATACCTACGATGGAC+AGG + chr3_1:81332871-81332890 None:intergenic 35.0%
TAGGAAATAGGGATGTCAAT+TGG + chr3_1:81332918-81332937 None:intergenic 35.0%
!! GCTCAAAATAATTCTAGGGT+AGG + chr3_1:81332937-81332956 None:intergenic 35.0%
TTGTTGCCCTTTAATAACAC+AGG - chr3_1:81333077-81333096 Msa0379890:intron 35.0%
TATTAGGAAATCCCGTAACT+TGG - chr3_1:81333259-81333278 Msa0379890:CDS 35.0%
TCATTGCAAAAGAACTGTAG+AGG - chr3_1:81333498-81333517 Msa0379890:intron 35.0%
! TTTGTCATTCGATTTTCGGA+CGG - chr3_1:81333628-81333647 Msa0379890:intron 35.0%
! GTAATGCTGTTTGCTGAAAT+TGG - chr3_1:81334461-81334480 Msa0379890:intron 35.0%
AGGTAACTCATCAAAACTGT+TGG - chr3_1:81334533-81334552 Msa0379890:intron 35.0%
AGAAGAAGTAAAGATAGGGT+TGG + chr3_1:81334954-81334973 None:intergenic 35.0%
TAGAGCTTAAACTCCATTGA+TGG - chr3_1:81335433-81335452 Msa0379890:intron 35.0%
! AAGTTTTCTTCCTCCATCAA+TGG + chr3_1:81335449-81335468 None:intergenic 35.0%
GTTGTTAGTTAGGAGGATAT+AGG + chr3_1:81335555-81335574 None:intergenic 35.0%
CACAACATATTCAAAGGTAG+GGG - chr3_1:81335698-81335717 Msa0379890:intron 35.0%
TTTCTCCCATTTGCAATGAA+GGG + chr3_1:81335740-81335759 None:intergenic 35.0%
! TTTTCTCCCATTTGCAATGA+AGG + chr3_1:81335741-81335760 None:intergenic 35.0%
TAAAAAGGATCTCGTTGGAT+TGG + chr3_1:81335950-81335969 None:intergenic 35.0%
CTTTGTAAAAAGGATCTCGT+TGG + chr3_1:81335955-81335974 None:intergenic 35.0%
! CAACGAGATCCTTTTTACAA+AGG - chr3_1:81335953-81335972 Msa0379890:intron 35.0%
TCTCAGAAACGTAATAGATG+CGG - chr3_1:81336019-81336038 Msa0379890:CDS 35.0%
CCCACATTACTTGAGAATTT+AGG - chr3_1:81336164-81336183 Msa0379890:intron 35.0%
TATTAAGTTACACACAAGCG+CGG + chr3_1:81336365-81336384 None:intergenic 35.0%
AGAACTTTGTGCGTAACAAA+TGG - chr3_1:81336450-81336469 Msa0379890:intron 35.0%
TGTATCATTCCACTATCAAG+TGG - chr3_1:81336509-81336528 Msa0379890:intron 35.0%
TCAAGTAGTAGAATGAAGGA+TGG - chr3_1:81336552-81336571 Msa0379890:intron 35.0%
CAAGTAGTAGAATGAAGGAT+GGG - chr3_1:81336553-81336572 Msa0379890:intron 35.0%
! TTTGCAATTCAGGGAAGTAT+AGG - chr3_1:81336928-81336947 Msa0379890:intron 35.0%
! TTCAGGGAAGTATAGGAAAA+TGG - chr3_1:81336935-81336954 Msa0379890:intron 35.0%
!! ACTATTCCATCGTTGATGAT+TGG - chr3_1:81337257-81337276 Msa0379890:intron 35.0%
GATATCTAATTACCCACTCT+AGG - chr3_1:81337609-81337628 Msa0379890:CDS 35.0%
GTTATATCGTGAGAAGAAAG+TGG + chr3_1:81337739-81337758 None:intergenic 35.0%
TACACTTCTACTAGTGTCAT+AGG + chr3_1:81337775-81337794 None:intergenic 35.0%
!! TAGAAGTGTAGAACTTTTGG+TGG - chr3_1:81337785-81337804 Msa0379890:CDS 35.0%
! GCTAGTTTGCAGATAAGAAC+AGG - chr3_1:81328492-81328511 Msa0379890:three_prime_UTR 40.0%
ATAAGAACAGGGAAGAGAAG+TGG - chr3_1:81328575-81328594 Msa0379890:three_prime_UTR 40.0%
TGTTGCAAAAACAAGGTTGG+TGG + chr3_1:81328742-81328761 None:intergenic 40.0%
!! GTTTCTAGTACAAAGGGAAG+GGG + chr3_1:81328807-81328826 None:intergenic 40.0%
!! CAGTTTCTAGTACAAAGGGA+AGG + chr3_1:81328809-81328828 None:intergenic 40.0%
CTTCCCTTTGTACTAGAAAC+TGG - chr3_1:81328807-81328826 Msa0379890:three_prime_UTR 40.0%
!! GTACCCAGTTTCTAGTACAA+AGG + chr3_1:81328814-81328833 None:intergenic 40.0%
! AGCAAGAGAGGATCTTGTTT+AGG + chr3_1:81328912-81328931 None:intergenic 40.0%
AACAAGATCCTCTCTTGCTT+TGG - chr3_1:81328913-81328932 Msa0379890:exon 40.0%
TATCTCTAGCACACATTCGA+TGG + chr3_1:81329031-81329050 None:intergenic 40.0%
!! GTCTCTCAAGCTTTAGATAC+TGG - chr3_1:81329121-81329140 Msa0379890:CDS 40.0%
TGTGGCCTCAAGATCAAATT+TGG + chr3_1:81329508-81329527 None:intergenic 40.0%
TCAACCTTTGTCCATGAATG+TGG + chr3_1:81329526-81329545 None:intergenic 40.0%
CGGAAAAGTGGTGAATTTGA+AGG + chr3_1:81329770-81329789 None:intergenic 40.0%
! AGGTTTGCTCTTCCAATGAA+AGG + chr3_1:81329940-81329959 None:intergenic 40.0%
! TGAGCAGCACTTTCTGTTTT+GGG + chr3_1:81330293-81330312 None:intergenic 40.0%
TCTTGAACGATAATTGGGAC+GGG + chr3_1:81330545-81330564 None:intergenic 40.0%
TCCTTTCTTGCAGGAAATGA+AGG - chr3_1:81330863-81330882 Msa0379890:intron 40.0%
ACCTTCATTTCCTGCAAGAA+AGG + chr3_1:81330867-81330886 None:intergenic 40.0%
TTTCTTGCAGGAAATGAAGG+TGG - chr3_1:81330866-81330885 Msa0379890:intron 40.0%
! TTTTAAATGTGCGAACCTGG+AGG + chr3_1:81330910-81330929 None:intergenic 40.0%
TTGCCATCTTGAAATTGACC+GGG - chr3_1:81330976-81330995 Msa0379890:intron 40.0%
TATCCCGGTCAATTTCAAGA+TGG + chr3_1:81330982-81331001 None:intergenic 40.0%
!!! CAATGTTTTAAAACCCGGAC+CGG - chr3_1:81331352-81331371 Msa0379890:intron 40.0%
! TCCCGCTCATTTGCTTTATT+AGG + chr3_1:81331918-81331937 None:intergenic 40.0%
CAAGCGGATAGGAATGAAAT+TGG - chr3_1:81332128-81332147 Msa0379890:intron 40.0%
! TCCCGCTCATTTGCTTTATT+AGG + chr3_1:81331918-81331937 None:intergenic 40.0%
! GAAACGTTTATTTCTCACGG+GGG + chr3_1:81332324-81332343 None:intergenic 40.0%
AGCAAGTTCACAAAGTCAAG+TGG - chr3_1:81332379-81332398 Msa0379890:intron 40.0%
AATATTGTGCTGCATGTACC+CGG - chr3_1:81332413-81332432 Msa0379890:intron 40.0%
!! AATTACCCGCCATTTTGAAC+GGG + chr3_1:81332810-81332829 None:intergenic 40.0%
CACATTGTTGGGTATGAGAT+TGG + chr3_1:81332841-81332860 None:intergenic 40.0%
CAATCTCATACCCAACAATG+TGG - chr3_1:81332839-81332858 Msa0379890:intron 40.0%
CAGGCAAATACCACATTGTT+GGG + chr3_1:81332852-81332871 None:intergenic 40.0%
ACAGGCAAATACCACATTGT+TGG + chr3_1:81332853-81332872 None:intergenic 40.0%
TCAATTGGACTCAAATCCAC+TGG + chr3_1:81332903-81332922 None:intergenic 40.0%
CTGTAATTATCATCGTGAGC+TGG + chr3_1:81333285-81333304 None:intergenic 40.0%
CATAAGGCTTACCTCTTGAT+AGG + chr3_1:81333577-81333596 None:intergenic 40.0%
! TTTTGGTCAAACCGCGATTT+TGG - chr3_1:81334049-81334068 Msa0379890:intron 40.0%
GAAACTCCTGAAATAGTCTG+CGG + chr3_1:81334842-81334861 None:intergenic 40.0%
!! GTTTGGTTTGCCTAATCCAA+TGG - chr3_1:81334892-81334911 Msa0379890:intron 40.0%
GAGGAGACTTCTTATTCACA+AGG - chr3_1:81334928-81334947 Msa0379890:intron 40.0%
CATTGCCACCTTTATACTGT+CGG - chr3_1:81334978-81334997 Msa0379890:intron 40.0%
ATTGCCACCTTTATACTGTC+GGG - chr3_1:81334979-81334998 Msa0379890:intron 40.0%
GAAGTTACCCGACAGTATAA+AGG + chr3_1:81334989-81335008 None:intergenic 40.0%
AGCTTAAACTCCATTGATGG+AGG - chr3_1:81335436-81335455 Msa0379890:intron 40.0%
GATGGAGGAAGAAAACTTGA+AGG - chr3_1:81335451-81335470 Msa0379890:intron 40.0%
TCAAAGGTAGGGGAAAATCA+TGG - chr3_1:81335708-81335727 Msa0379890:intron 40.0%
ATACGTCCCTTCATTGCAAA+TGG - chr3_1:81335731-81335750 Msa0379890:intron 40.0%
TACGTCCCTTCATTGCAAAT+GGG - chr3_1:81335732-81335751 Msa0379890:intron 40.0%
!! TTCTGAGATATTACCCGCTT+TGG + chr3_1:81336007-81336026 None:intergenic 40.0%
GAACATTGGATCACTAGGTA+GGG - chr3_1:81336053-81336072 Msa0379890:CDS 40.0%
AACATTGGATCACTAGGTAG+GGG - chr3_1:81336054-81336073 Msa0379890:CDS 40.0%
TCCTCGAAAATACAGTGTTG+TGG - chr3_1:81336206-81336225 Msa0379890:CDS 40.0%
CCTCGAAAATACAGTGTTGT+GGG - chr3_1:81336207-81336226 Msa0379890:CDS 40.0%
CAGACTCATGCATATTTCCT+CGG - chr3_1:81336726-81336745 Msa0379890:intron 40.0%
!! ATATTTCCTCGGTGCCTATT+GGG - chr3_1:81336737-81336756 Msa0379890:intron 40.0%
!! ATTCCATCGTTGATGATTGG+AGG - chr3_1:81337260-81337279 Msa0379890:intron 40.0%
ACACAAGGACTTACTCGAAT+CGG - chr3_1:81337404-81337423 Msa0379890:intron 40.0%
GATGACATTTGCAACTGTGA+AGG - chr3_1:81337426-81337445 Msa0379890:intron 40.0%
CATTCTTCACGTTTGTACTC+GGG + chr3_1:81337568-81337587 None:intergenic 40.0%
GCATTCTTCACGTTTGTACT+CGG + chr3_1:81337569-81337588 None:intergenic 40.0%
AATGCTTAGCCATGTTCAGT+AGG - chr3_1:81337584-81337603 Msa0379890:CDS 40.0%
AGATATCCACCTACTGAACA+TGG + chr3_1:81337596-81337615 None:intergenic 40.0%
TCATCATGTTGAACTCAGCT+TGG + chr3_1:81337649-81337668 None:intergenic 40.0%
TAGTGTCATAGGCTAGGAAT+AGG + chr3_1:81337764-81337783 None:intergenic 40.0%
TTCTACTAGTGTCATAGGCT+AGG + chr3_1:81337770-81337789 None:intergenic 40.0%
CTACAAGTCGTGTGAAATTG+CGG - chr3_1:81337854-81337873 Msa0379890:CDS 40.0%
! TACATTCCTTTTTCTCACCC+TGG + chr3_1:81337937-81337956 None:intergenic 40.0%
AGGCATAGTTCACATCACAG+TGG - chr3_1:81328639-81328658 Msa0379890:three_prime_UTR 45.0%
GTACTAGAAACTGGGTACGT+AGG - chr3_1:81328816-81328835 Msa0379890:three_prime_UTR 45.0%
TGAAACAGATGAAACTGCCG+CGG - chr3_1:81328851-81328870 Msa0379890:three_prime_UTR 45.0%
CCTCTCTTGCTTTGGTTAAC+CGG - chr3_1:81328921-81328940 Msa0379890:CDS 45.0%
!! TCTGGCCTTGCCTTTGAAAT+AGG - chr3_1:81328966-81328985 Msa0379890:CDS 45.0%
TGATCTTGAGGCCACATTCA+TGG - chr3_1:81329512-81329531 Msa0379890:CDS 45.0%
AGGAAGGGGGAAAGTTCTTA+AGG + chr3_1:81329960-81329979 None:intergenic 45.0%
TAAGAGAATCCAGTACCCAC+AGG + chr3_1:81330269-81330288 None:intergenic 45.0%
! CTGAGCAGCACTTTCTGTTT+TGG + chr3_1:81330294-81330313 None:intergenic 45.0%
ATTGCTGGTGACTCATACTC+AGG - chr3_1:81330515-81330534 Msa0379890:intron 45.0%
TTGACCAGTCATTGTGAGCA+TGG + chr3_1:81330582-81330601 None:intergenic 45.0%
CGCTATAGTACCCAACCTAA+AGG + chr3_1:81331039-81331058 None:intergenic 45.0%
AGACTGGGTCAATAGTCATG+CGG + chr3_1:81331443-81331462 None:intergenic 45.0%
GGTTGTTCAGCTAAGCAGAT+CGG + chr3_1:81332586-81332605 None:intergenic 45.0%
!!! TTTTAAAATCCGGACCGACC+CGG + chr3_1:81332649-81332668 None:intergenic 45.0%
! ATTTTGAACGGGTATGTGCG+CGG + chr3_1:81332799-81332818 None:intergenic 45.0%
CACATACCCGTTCAAAATGG+CGG - chr3_1:81332801-81332820 Msa0379890:intron 45.0%
ACATACCCGTTCAAAATGGC+GGG - chr3_1:81332802-81332821 Msa0379890:intron 45.0%
AGACATCCAGTCCTATCAAG+AGG - chr3_1:81333563-81333582 Msa0379890:intron 45.0%
CAATAGGCAATAGCCCACTT+AGG + chr3_1:81334813-81334832 None:intergenic 45.0%
TAGTCTGCGGACACAACAAT+AGG + chr3_1:81334829-81334848 None:intergenic 45.0%
TTGTGTCCGCAGACTATTTC+AGG - chr3_1:81334833-81334852 Msa0379890:intron 45.0%
TTGGAACCGAAATGCGAGTT+TGG - chr3_1:81334875-81334894 Msa0379890:intron 45.0%
GGCAAACCAAACTCGCATTT+CGG + chr3_1:81334884-81334903 None:intergenic 45.0%
!! CCATTGGCTTCCATTGGATT+AGG + chr3_1:81334905-81334924 None:intergenic 45.0%
CCTAATCCAATGGAAGCCAA+TGG - chr3_1:81334902-81334921 Msa0379890:intron 45.0%
ATCCAATGGAAGCCAATGGT+AGG - chr3_1:81334906-81334925 Msa0379890:intron 45.0%
AAGAAGTCTCCTCCTACCAT+TGG + chr3_1:81334921-81334940 None:intergenic 45.0%
GTTACCCGACAGTATAAAGG+TGG + chr3_1:81334986-81335005 None:intergenic 45.0%
! TTGTAACTGCTGGCTAACCA+TGG + chr3_1:81335604-81335623 None:intergenic 45.0%
CCTTAACCACTTGTAACTGC+TGG + chr3_1:81335614-81335633 None:intergenic 45.0%
CCAGCAGTTACAAGTGGTTA+AGG - chr3_1:81335611-81335630 Msa0379890:intron 45.0%
ACGTAATAGATGCGGACTTG+AGG - chr3_1:81336027-81336046 Msa0379890:CDS 45.0%
AATAGATGCGGACTTGAGGT+TGG - chr3_1:81336031-81336050 Msa0379890:CDS 45.0%
GGTTGGAACATTGGATCACT+AGG - chr3_1:81336048-81336067 Msa0379890:CDS 45.0%
GGAACATTGGATCACTAGGT+AGG - chr3_1:81336052-81336071 Msa0379890:CDS 45.0%
TCAAACTCATGCCATGCTTG+AGG - chr3_1:81336077-81336096 Msa0379890:intron 45.0%
CAAACTCATGCCATGCTTGA+GGG - chr3_1:81336078-81336097 Msa0379890:intron 45.0%
GTCGAGACTAAGCTGCTAAA+AGG + chr3_1:81336112-81336131 None:intergenic 45.0%
TTTAGCAGCTTAGTCTCGAC+CGG - chr3_1:81336112-81336131 Msa0379890:intron 45.0%
TGTACTGTAGTAGTAGCCAC+CGG + chr3_1:81336134-81336153 None:intergenic 45.0%
! CCCACAACACTGTATTTTCG+AGG + chr3_1:81336210-81336229 None:intergenic 45.0%
AATACAGTGTTGTGGGCTTG+AGG - chr3_1:81336214-81336233 Msa0379890:CDS 45.0%
ACAGTTCGACCACTTGATAG+TGG + chr3_1:81336521-81336540 None:intergenic 45.0%
!! CATATTTCCTCGGTGCCTAT+TGG - chr3_1:81336736-81336755 Msa0379890:intron 45.0%
ATGGTGAACATTAGCGTCGT+TGG + chr3_1:81336763-81336782 None:intergenic 45.0%
CCACTCCAGCACAAAGATTA+GGG + chr3_1:81336884-81336903 None:intergenic 45.0%
ACCACTCCAGCACAAAGATT+AGG + chr3_1:81336885-81336904 None:intergenic 45.0%
! CACGCTTGAGTTGCCAAAAA+TGG + chr3_1:81337223-81337242 None:intergenic 45.0%
!!! CATTTTTGGCAACTCAAGCG+TGG - chr3_1:81337221-81337240 Msa0379890:intron 45.0%
ATTACAGGGAGGAGGACATA+CGG - chr3_1:81337540-81337559 Msa0379890:intron 45.0%
CGCAATTTCACACGACTTGT+AGG + chr3_1:81337856-81337875 None:intergenic 45.0%
!! ACTTAAATAAAATAAAAAAT+TGG + chr3_1:81329703-81329722 None:intergenic 5.0%
!!! TTTTTTATTTTATTTAAGTT+TGG - chr3_1:81329704-81329723 Msa0379890:intron 5.0%
!!! TAATTATTTTGAATTAATTT+TGG + chr3_1:81332977-81332996 None:intergenic 5.0%
!! TTATTTATACAAATAATAAA+AGG - chr3_1:81336814-81336833 Msa0379890:intron 5.0%
AACAGGGAAGAGAAGTGGTG+TGG - chr3_1:81328580-81328599 Msa0379890:three_prime_UTR 50.0%
AGAAACTGGGTACGTAGGAG+TGG - chr3_1:81328821-81328840 Msa0379890:three_prime_UTR 50.0%
GAAACTGGGTACGTAGGAGT+GGG - chr3_1:81328822-81328841 Msa0379890:three_prime_UTR 50.0%
CCGGTTAACCAAAGCAAGAG+AGG + chr3_1:81328924-81328943 None:intergenic 50.0%
CTCTTGCTTTGGTTAACCGG+TGG - chr3_1:81328924-81328943 Msa0379890:CDS 50.0%
TAACCAGTGGTCCGAAGTAC+CGG - chr3_1:81329250-81329269 Msa0379890:CDS 50.0%
GGACATGCTAACCGGTACTT+CGG + chr3_1:81329264-81329283 None:intergenic 50.0%
GAGGCCACATTCATGGACAA+AGG - chr3_1:81329519-81329538 Msa0379890:CDS 50.0%
AACATGTTGGGGTGAGGAAG+GGG + chr3_1:81329974-81329993 None:intergenic 50.0%
CAACATGTTGGGGTGAGGAA+GGG + chr3_1:81329975-81329994 None:intergenic 50.0%
GTATCCAACATGTTGGGGTG+AGG + chr3_1:81329980-81329999 None:intergenic 50.0%
TTGGATTTGCCTGTGGGTAC+TGG - chr3_1:81330257-81330276 Msa0379890:intron 50.0%
GGTACCATGCTCACAATGAC+TGG - chr3_1:81330575-81330594 Msa0379890:intron 50.0%
ATGAAGGTGGTCTTCAACCG+TGG - chr3_1:81330879-81330898 Msa0379890:intron 50.0%
TCAACCGTGGATAAACCTCC+AGG - chr3_1:81330892-81330911 Msa0379890:intron 50.0%
CGAACCTGGAGGTTTATCCA+CGG + chr3_1:81330899-81330918 None:intergenic 50.0%
TGGGTAAGTGGGAGTTGAAC+CGG + chr3_1:81332435-81332454 None:intergenic 50.0%
GTTATGACCCACCAACGAAC+CGG + chr3_1:81332499-81332518 None:intergenic 50.0%
! GGTTCGTTGGTGGGTCATAA+CGG - chr3_1:81332498-81332517 Msa0379890:intron 50.0%
TCGGATATGCAAGCAACCCA+GGG + chr3_1:81332567-81332586 None:intergenic 50.0%
ATCGGATATGCAAGCAACCC+AGG + chr3_1:81332568-81332587 None:intergenic 50.0%
TGTGCGTGCATAAGACACGT+TGG - chr3_1:81332759-81332778 Msa0379890:intron 50.0%
! TTTTGAACGGGTATGTGCGC+GGG + chr3_1:81332798-81332817 None:intergenic 50.0%
GCGCACATACCCGTTCAAAA+TGG - chr3_1:81332798-81332817 Msa0379890:intron 50.0%
GGTATTTGCCTGTCCATCGT+AGG - chr3_1:81332860-81332879 Msa0379890:intron 50.0%
ATCGTGAGCTGGCCAAGTTA+CGG + chr3_1:81333274-81333293 None:intergenic 50.0%
GGCTTACCTCTTGATAGGAC+TGG + chr3_1:81333572-81333591 None:intergenic 50.0%
!! CTCCTACCATTGGCTTCCAT+TGG + chr3_1:81334911-81334930 None:intergenic 50.0%
CAATGGAAGCCAATGGTAGG+AGG - chr3_1:81334909-81334928 Msa0379890:intron 50.0%
! GGTTAGCCAGCAGTTACAAG+TGG - chr3_1:81335605-81335624 Msa0379890:intron 50.0%
! TCTCGTTGGATTGGAGAGAG+TGG + chr3_1:81335941-81335960 None:intergenic 50.0%
GGCTCACACAAGATCCAAAG+CGG - chr3_1:81335990-81336009 Msa0379890:CDS 50.0%
GCTCACACAAGATCCAAAGC+GGG - chr3_1:81335991-81336010 Msa0379890:CDS 50.0%
CGGACTTGAGGTTGGAACAT+TGG - chr3_1:81336039-81336058 Msa0379890:CDS 50.0%
ATTAGCGTCGTTGGCCCAAT+AGG + chr3_1:81336754-81336773 None:intergenic 50.0%
CCTTTCGAATGTGCAGTGCA+TGG + chr3_1:81336782-81336801 None:intergenic 50.0%
CCATGCACTGCACATTCGAA+AGG - chr3_1:81336779-81336798 Msa0379890:intron 50.0%
GTGCACCCTAATCTTTGTGC+TGG - chr3_1:81336876-81336895 Msa0379890:intron 50.0%
CCCTAATCTTTGTGCTGGAG+TGG - chr3_1:81336881-81336900 Msa0379890:intron 50.0%
CTGCCTCCAATCATCAACGA+TGG + chr3_1:81337266-81337285 None:intergenic 50.0%
!! TCGTTGATGATTGGAGGCAG+TGG - chr3_1:81337266-81337285 Msa0379890:intron 50.0%
GCTTAGCCATGTTCAGTAGG+TGG - chr3_1:81337587-81337606 Msa0379890:CDS 50.0%
AGGGAACCAGGGTGAGAAAA+AGG - chr3_1:81337928-81337947 Msa0379890:five_prime_UTR 50.0%
GGGGTCCTTGAAAACCAGGA+AGG + chr3_1:81328788-81328807 None:intergenic 55.0%
GGAAGGGGTCCTTGAAAACC+AGG + chr3_1:81328792-81328811 None:intergenic 55.0%
CTTTGGTTAACCGGTGGTCC+TGG - chr3_1:81328930-81328949 Msa0379890:CDS 55.0%
CCAGAGAAAGCAGAGCAACC+AGG + chr3_1:81328951-81328970 None:intergenic 55.0%
CCTGGTTGCTCTGCTTTCTC+TGG - chr3_1:81328948-81328967 Msa0379890:CDS 55.0%
TAACCGGTACTTCGGACCAC+TGG + chr3_1:81329256-81329275 None:intergenic 55.0%
ACATGTTGGGGTGAGGAAGG+GGG + chr3_1:81329973-81329992 None:intergenic 55.0%
CCAACATGTTGGGGTGAGGA+AGG + chr3_1:81329976-81329995 None:intergenic 55.0%
CCTTCCTCACCCCAACATGT+TGG - chr3_1:81329973-81329992 Msa0379890:intron 55.0%
! GTGCTGCTCAGCAAAGCACT+TGG - chr3_1:81330303-81330322 Msa0379890:intron 55.0%
AGTGACCCAGTACCTTGACC+GGG + chr3_1:81331385-81331404 None:intergenic 55.0%
CAGTGACCCAGTACCTTGAC+CGG + chr3_1:81331386-81331405 None:intergenic 55.0%
GTACTGGGTCACTGTGTCAG+TGG - chr3_1:81331392-81331411 Msa0379890:intron 55.0%
TGGGTCACTGTGTCAGTGGT+CGG - chr3_1:81331396-81331415 Msa0379890:intron 55.0%
TGTGTCAGTGGTCGGACCAA+TGG - chr3_1:81331404-81331423 Msa0379890:intron 55.0%
GTGTCAGTGGTCGGACCAAT+GGG - chr3_1:81331405-81331424 Msa0379890:intron 55.0%
!! TGGTCGGACCAATGGGTTAC+TGG - chr3_1:81331412-81331431 Msa0379890:intron 55.0%
!! CGGACCAATGGGTTACTGGT+CGG - chr3_1:81331416-81331435 Msa0379890:intron 55.0%
AGAAAACCTGTGCGACGCAC+GGG + chr3_1:81331739-81331758 None:intergenic 55.0%
GAGAAAACCTGTGCGACGCA+CGG + chr3_1:81331740-81331759 None:intergenic 55.0%
GGGTAAGTGGGAGTTGAACC+GGG + chr3_1:81332434-81332453 None:intergenic 55.0%
! TAGAATCCGGTCCGGTTCGT+TGG - chr3_1:81332485-81332504 Msa0379890:intron 55.0%
GGTGGGTCATAACGGTTCAC+TGG - chr3_1:81332506-81332525 Msa0379890:intron 55.0%
TGCAAGCAACCCAGGGAACT+CGG + chr3_1:81332560-81332579 None:intergenic 55.0%
TCGTGAGCTGGCCAAGTTAC+GGG + chr3_1:81333273-81333292 None:intergenic 55.0%
GGTCTATCAGCCCTCAAGCA+TGG + chr3_1:81336091-81336110 None:intergenic 55.0%
CAGTGTTGTGGGCTTGAGGT+TGG - chr3_1:81336218-81336237 Msa0379890:CDS 55.0%
AGCAGAGCAACCAGGACCAC+CGG + chr3_1:81328943-81328962 None:intergenic 60.0%
ACCTTGACCGGGTCGACTAC+CGG + chr3_1:81331374-81331393 None:intergenic 60.0%
AGTCGACCCGGTCAAGGTAC+TGG - chr3_1:81331376-81331395 Msa0379890:intron 60.0%
! GTCGACCCGGTCAAGGTACT+GGG - chr3_1:81331377-81331396 Msa0379890:intron 60.0%
CGGTCCGACCAGTAACCCAT+TGG + chr3_1:81331423-81331442 None:intergenic 60.0%
! TTTTGACCCGTGCGTCGCAC+AGG - chr3_1:81331730-81331749 Msa0379890:intron 60.0%
! AATCCGGTCCGGTTCGTTGG+TGG - chr3_1:81332488-81332507 Msa0379890:intron 60.0%
! ATCCGGTCCGGTTCGTTGGT+GGG - chr3_1:81332489-81332508 Msa0379890:intron 60.0%
!! GAACTCGGTGTGACTCGTGC+GGG + chr3_1:81332545-81332564 None:intergenic 60.0%
!! GGAACTCGGTGTGACTCGTG+CGG + chr3_1:81332546-81332565 None:intergenic 60.0%
ACGAGTCACACCGAGTTCCC+TGG - chr3_1:81332547-81332566 Msa0379890:intron 60.0%
CGAGTCACACCGAGTTCCCT+GGG - chr3_1:81332548-81332567 Msa0379890:intron 60.0%
GACTCAGGAACCAGAGGGGT+GGG + chr3_1:81332611-81332630 None:intergenic 60.0%
! GGTCGACTCAGGAACCAGAG+GGG + chr3_1:81332615-81332634 None:intergenic 60.0%
! CGGTCGACTCAGGAACCAGA+GGG + chr3_1:81332616-81332635 None:intergenic 60.0%
! CCTCTGGTTCCTGAGTCGAC+CGG - chr3_1:81332614-81332633 Msa0379890:intron 60.0%
TGGTTCCTGAGTCGACCGGT+TGG - chr3_1:81332618-81332637 Msa0379890:intron 60.0%
AGCAGCTTAGTCTCGACCGG+TGG - chr3_1:81336115-81336134 Msa0379890:intron 60.0%
ACCGGTAGTCGACCCGGTCA+AGG - chr3_1:81331370-81331389 Msa0379890:intron 65.0%
GACCCACCAACGAACCGGAC+CGG + chr3_1:81332494-81332513 None:intergenic 65.0%
TCGGTGTGACTCGTGCGGGT+CGG + chr3_1:81332541-81332560 None:intergenic 65.0%
TCAGGAACCAGAGGGGTGGG+CGG + chr3_1:81332608-81332627 None:intergenic 65.0%
CGACTCAGGAACCAGAGGGG+TGG + chr3_1:81332612-81332631 None:intergenic 65.0%
! CCGGTCGACTCAGGAACCAG+AGG + chr3_1:81332617-81332636 None:intergenic 65.0%
CCTGAGTCGACCGGTTGGAC+CGG - chr3_1:81332623-81332642 Msa0379890:intron 65.0%
AAAATCCGGACCGACCCGGC+CGG + chr3_1:81332645-81332664 None:intergenic 65.0%
AACGGGTATGTGCGCGGGTG+CGG + chr3_1:81332793-81332812 None:intergenic 65.0%
! CGTTGGCCCAATAGGCACCG+AGG + chr3_1:81336746-81336765 None:intergenic 65.0%
ACCCGGACCGGTAGTCGACC+CGG - chr3_1:81331364-81331383 Msa0379890:intron 70.0%
ACCGGGTCGACTACCGGTCC+GGG + chr3_1:81331368-81331387 None:intergenic 70.0%
GACCGGGTCGACTACCGGTC+CGG + chr3_1:81331369-81331388 None:intergenic 70.0%
GTGACTCGTGCGGGTCGGGT+GGG + chr3_1:81332536-81332555 None:intergenic 70.0%
TGTGACTCGTGCGGGTCGGG+TGG + chr3_1:81332537-81332556 None:intergenic 70.0%
CGGTGTGACTCGTGCGGGTC+GGG + chr3_1:81332540-81332559 None:intergenic 70.0%
GAACAACCCGCCCACCCCTC+TGG - chr3_1:81332598-81332617 Msa0379890:intron 70.0%
CAGGAACCAGAGGGGTGGGC+GGG + chr3_1:81332607-81332626 None:intergenic 70.0%
! CCGGTCCAACCGGTCGACTC+AGG + chr3_1:81332626-81332645 None:intergenic 70.0%
AGTCGACCGGTTGGACCGGC+CGG - chr3_1:81332627-81332646 Msa0379890:intron 70.0%
GTCGACCGGTTGGACCGGCC+GGG - chr3_1:81332628-81332647 Msa0379890:intron 75.0%
ACCGGTTGGACCGGCCGGGT+CGG - chr3_1:81332632-81332651 Msa0379890:intron 75.0%
ACCGACCCGGCCGGTCCAAC+CGG + chr3_1:81332636-81332655 None:intergenic 75.0%
TTGGACCGGCCGGGTCGGTC+CGG - chr3_1:81332637-81332656 Msa0379890:intron 75.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 81328482 81338068 81328482 ID=Msa0379890;Name=Msa0379890
chr3_1 mRNA 81328482 81338068 81328482 ID=Msa0379890-mRNA-1;Parent=Msa0379890;Name=Msa0379890-mRNA-1;_AED=0.25;_eAED=0.25;_QI=145|0.91|0.92|1|1|1|13|438|500
chr3_1 exon 81328482 81329003 81328482 ID=Msa0379890-mRNA-1:exon:20645;Parent=Msa0379890-mRNA-1
chr3_1 exon 81329103 81329148 81329103 ID=Msa0379890-mRNA-1:exon:20644;Parent=Msa0379890-mRNA-1
chr3_1 exon 81329239 81329352 81329239 ID=Msa0379890-mRNA-1:exon:20643;Parent=Msa0379890-mRNA-1
chr3_1 exon 81329492 81329610 81329492 ID=Msa0379890-mRNA-1:exon:20642;Parent=Msa0379890-mRNA-1
chr3_1 exon 81329750 81329821 81329750 ID=Msa0379890-mRNA-1:exon:20641;Parent=Msa0379890-mRNA-1
chr3_1 exon 81331550 81331705 81331550 ID=Msa0379890-mRNA-1:exon:20640;Parent=Msa0379890-mRNA-1
chr3_1 exon 81332966 81333052 81332966 ID=Msa0379890-mRNA-1:exon:20639;Parent=Msa0379890-mRNA-1
chr3_1 exon 81333197 81333298 81333197 ID=Msa0379890-mRNA-1:exon:20638;Parent=Msa0379890-mRNA-1
chr3_1 exon 81335637 81335674 81335637 ID=Msa0379890-mRNA-1:exon:20637;Parent=Msa0379890-mRNA-1
chr3_1 exon 81335954 81336077 81335954 ID=Msa0379890-mRNA-1:exon:20636;Parent=Msa0379890-mRNA-1
chr3_1 exon 81336189 81336311 81336189 ID=Msa0379890-mRNA-1:exon:20635;Parent=Msa0379890-mRNA-1
chr3_1 exon 81337010 81337086 81337010 ID=Msa0379890-mRNA-1:exon:20634;Parent=Msa0379890-mRNA-1
chr3_1 exon 81337563 81338068 81337563 ID=Msa0379890-mRNA-1:exon:20633;Parent=Msa0379890-mRNA-1
chr3_1 five_prime_UTR 81337924 81338068 81337924 ID=Msa0379890-mRNA-1:five_prime_utr;Parent=Msa0379890-mRNA-1
chr3_1 CDS 81337563 81337923 81337563 ID=Msa0379890-mRNA-1:cds;Parent=Msa0379890-mRNA-1
chr3_1 CDS 81337010 81337086 81337010 ID=Msa0379890-mRNA-1:cds;Parent=Msa0379890-mRNA-1
chr3_1 CDS 81336189 81336311 81336189 ID=Msa0379890-mRNA-1:cds;Parent=Msa0379890-mRNA-1
chr3_1 CDS 81335954 81336077 81335954 ID=Msa0379890-mRNA-1:cds;Parent=Msa0379890-mRNA-1
chr3_1 CDS 81335637 81335674 81335637 ID=Msa0379890-mRNA-1:cds;Parent=Msa0379890-mRNA-1
chr3_1 CDS 81333197 81333298 81333197 ID=Msa0379890-mRNA-1:cds;Parent=Msa0379890-mRNA-1
chr3_1 CDS 81332966 81333052 81332966 ID=Msa0379890-mRNA-1:cds;Parent=Msa0379890-mRNA-1
chr3_1 CDS 81331550 81331705 81331550 ID=Msa0379890-mRNA-1:cds;Parent=Msa0379890-mRNA-1
chr3_1 CDS 81329750 81329821 81329750 ID=Msa0379890-mRNA-1:cds;Parent=Msa0379890-mRNA-1
chr3_1 CDS 81329492 81329610 81329492 ID=Msa0379890-mRNA-1:cds;Parent=Msa0379890-mRNA-1
chr3_1 CDS 81329239 81329352 81329239 ID=Msa0379890-mRNA-1:cds;Parent=Msa0379890-mRNA-1
chr3_1 CDS 81329103 81329148 81329103 ID=Msa0379890-mRNA-1:cds;Parent=Msa0379890-mRNA-1
chr3_1 CDS 81328920 81329003 81328920 ID=Msa0379890-mRNA-1:cds;Parent=Msa0379890-mRNA-1
chr3_1 three_prime_UTR 81328482 81328919 81328482 ID=Msa0379890-mRNA-1:three_prime_utr;Parent=Msa0379890-mRNA-1
Gene Sequence

>Msa0379890

ATGGCAATGCTTAGGCATAGTTCACATCACAGTGGTGACATTATTATTACTAGAACCTTGTTTAAGATGATTATAATATTTGTTATAGCATTCCTATTGTTACAAAATTCATCCACCAACCTTGTTTTTGCAACATCTCAATCCAATATTGTAAAATTCCTTCCTGGTTTTCAAGGACCCCTTCCCTTTGTACTAGAAACTGGGTACGTAGGAGTGGGTGAAACTGAAACAGATGAAACTGCCGCGGAATTGTTCTACTATTTTATAGAATCTGAGAAAAATCCTAAACAAGATCCTCTCTTGCTTTGGTTAACCGGTGGTCCTGGTTGCTCTGCTTTCTCTGGCCTTGCCTTTGAAATAGGTCCAATAACATTTAAAAATGAGGAATACAACGGGAGCTTACCAAATTTGATCTTGAGGCCACATTCATGGACAAAGGTAAGTAATATTATATTTTTGGATTTGCCTGTGGGTACTGGATTCTCTTATCCCAAAACAGAAAGTGCTGCTCAGCAAAGCACTTGGAAGCTAGTTCACAATGCTCATCAATTTCTTAGGAAGTGGCTCATGGATCATCCAAAATTTATCTCAAATGAAGTGTACATTGCTGGTGACTCATACTCAGGCATTCCCGTCCCAATTATCGTTCAAGAAATTTCATATGGTACCATGCTCACAATGACTGGAAATGAAGGTGGTCTTCAACCGTGGATAAACCTCCAGGGATACATATTAGGAAATCCCGTAACTTGGCCAGCTCACGATGATAATTACAGAATAGCATTTAATCATGGCATGGGACTTATTTCTAATGAACTCTACGAGTCATTGCAAAAGAACTGTAGAGGTGAGTATAAAAATATAGATCCCCAAAATGTATTTTGTCTAGAAGACATCCAGTCCTATCAAGAGACTATTTCAGGAGTTTCTGAAGTTCATATTTTGGAACCGAAATGCGAGTTTGGTTTGCCTAATCCAATGGAAGCCAATGGTAGGAGGAGACTTCTTATTCACAAGGCCAACCCTATCTTTACTTCTTCTCTTACATTGCCACCTTTATACTGTCGGACTCATGCATATTTCCTCGGTGCCTATTGGGCCAACGACGCTAATGTTCACCATGCACTGCACATTCGAAAGGGAAGTATAGGAAAATGGAAGCGTTGTAACTTTGACATAACTTTCAAGCACGAAATAGTTAACAGCTTTGAGTATCATGTAAATCTTAGCAGAAAAGGTTATCGTTCATTAATATACAGTGGGGATCATGACATGAAAGTTCCATTTTTGGCAACTCAAGCGTGGATAAGATCTTTAAACTATTCCATCGTTGATGATTGGAGGCAGTGGTATTCTAATTCTCAAGTAGCAGGATACACAAGGACTTACTCGAATCGGATGACATTTGCAACTGTGAAGGGAGGAGGACATACGGCTCCCGAGTACAAACGTGAAGAATGCTTAGCCATGTTCAGTAGGTGGATATCTAATTACCCACTCTAG
Protein sequence

>Msa0379890

MAMLRHSSHHSGDIIITRTLFKMIIIFVIAFLLLQNSSTNLVFATSQSNIVKFLPGFQGPLPFVLETGYVGVGETETDETAAELFYYFIESEKNPKQDPLLLWLTGGPGCSAFSGLAFEIGPITFKNEEYNGSLPNLILRPHSWTKVSNIIFLDLPVGTGFSYPKTESAAQQSTWKLVHNAHQFLRKWLMDHPKFISNEVYIAGDSYSGIPVPIIVQEISYGTMLTMTGNEGGLQPWINLQGYILGNPVTWPAHDDNYRIAFNHGMGLISNELYESLQKNCRGEYKNIDPQNVFCLEDIQSYQETISGVSEVHILEPKCEFGLPNPMEANGRRRLLIHKANPIFTSSLTLPPLYCRTHAYFLGAYWANDANVHHALHIRKGSIGKWKRCNFDITFKHEIVNSFEYHVNLSRKGYRSLIYSGDHDMKVPFLATQAWIRSLNYSIVDDWRQWYSNSQVAGYTRTYSNRMTFATVKGGGHTAPEYKREECLAMFSRWISNYPL*