AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1317340


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1317340 MtrunA17_Chr8g0347631 93.868 212 12 1 1 211 1 212 1.14e-140 391
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1317340 AT2G04039.1 62.658 158 53 3 58 210 42 198 4.62e-54 172
Msa1317340 AT2G04039.2 76.636 107 24 1 104 209 57 163 9.17e-54 170
Msa1317340 AT2G04039.3 55.856 111 43 3 58 163 42 151 2.42e-24 95.9

Find 55 sgRNAs with CRISPR-Local

Find 137 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTTACTGTTGCTGCTTT+TGG 0.124923 8_4:+18582181 None:intergenic
AAGGCAACCCCTATTCATTT+TGG 0.130826 8_4:-18581042 Msa1317340:CDS
CTTCAAAACTTATTGTCTTT+TGG 0.181488 8_4:-18580824 Msa1317340:CDS
AGTTGGGTATGATAACATTT+TGG 0.193584 8_4:+18582820 None:intergenic
AATAAACCAGTGACAGAAAA+TGG 0.253093 8_4:-18582978 Msa1317340:five_prime_UTR
TTCTTTCCCACAGGAATTAC+AGG 0.261997 8_4:-18581016 Msa1317340:intron
TTCTGTCACTGGTTTATTGA+TGG 0.271494 8_4:+18582983 None:intergenic
TCTAATATTGCTTTCAATGA+AGG 0.341804 8_4:+18582100 None:intergenic
CTCATTGACTATGTGGTATA+TGG 0.382028 8_4:-18580679 Msa1317340:three_prime_UTR
AAGAAGGCCCAAAATGAATA+GGG 0.412873 8_4:+18581034 None:intergenic
AAAGAAGGCCCAAAATGAAT+AGG 0.419642 8_4:+18581033 None:intergenic
GGCTTAGCTGGAGCTTTAGC+AGG 0.433823 8_4:+18582154 None:intergenic
ATCATCACCAATACTACCTT+TGG 0.437063 8_4:-18582793 Msa1317340:intron
CACGTTTGTTGATGAATGCC+CGG 0.446871 8_4:-18580602 Msa1317340:three_prime_UTR
TTCTTCTCATCAACTAGAAA+CGG 0.449513 8_4:+18580852 None:intergenic
CTCCTCCATCATCTGAGGTA+AGG 0.455147 8_4:+18582132 None:intergenic
AATATCAGAGAGATCTTGTT+GGG 0.459022 8_4:+18582075 None:intergenic
TTGCTAAGAGGTGGAGCACT+TGG 0.471802 8_4:-18582897 Msa1317340:CDS
TATTGGTGATGATGTTGAGT+TGG 0.472398 8_4:+18582803 None:intergenic
CACAAGGGATTATTCCTGTA+TGG 0.477768 8_4:-18580782 Msa1317340:CDS
AAAACACAGAAGAATGCAAA+TGG 0.496803 8_4:-18582925 Msa1317340:exon
GAGAATCAATCTTTCCATAC+AGG 0.504256 8_4:+18580768 None:intergenic
ATTGGTGATGATGTTGAGTT+GGG 0.508597 8_4:+18582804 None:intergenic
TTTAGCTACTGCTGAAACAA+AGG 0.509101 8_4:-18582224 Msa1317340:intron
TGTAATTCCTGTGGGAAAGA+AGG 0.510749 8_4:+18581018 None:intergenic
TGTGCTTGAGCAGGTCCAAA+GGG 0.512937 8_4:-18580918 Msa1317340:intron
AAAAGCAGCAACAGTAAAGA+AGG 0.515492 8_4:-18582179 Msa1317340:CDS
GATGACAGAGAAAACCCCTT+TGG 0.524451 8_4:+18580903 None:intergenic
CAATATCAGAGAGATCTTGT+TGG 0.526999 8_4:+18582074 None:intergenic
ACGTTTGTTGATGAATGCCC+GGG 0.529352 8_4:-18580601 Msa1317340:three_prime_UTR
TCCTCCATCATCTGAGGTAA+GGG 0.531229 8_4:+18582133 None:intergenic
AGATCTCTCTGATATTGAGC+TGG 0.533275 8_4:-18582068 Msa1317340:CDS
TCTCTGTCATCTTACAACTC+AGG 0.533545 8_4:-18580891 Msa1317340:CDS
AGACATACCAAAGGTAGTAT+TGG 0.536066 8_4:+18582786 None:intergenic
ACCTTGACTCATTGACTATG+TGG 0.544780 8_4:-18580686 Msa1317340:three_prime_UTR
TTGTCAGAAGCATACGTTGG+AGG 0.552359 8_4:+18583009 None:intergenic
TAAGCCCTTACCTCAGATGA+TGG 0.552759 8_4:-18582137 Msa1317340:CDS
TATTATGATTAACAGTTGGA+AGG 0.560411 8_4:-18581079 Msa1317340:intron
CAAGAACCATGTGGATCAGA+AGG 0.563549 8_4:-18583047 Msa1317340:five_prime_UTR
ATGTGCTTGAGCAGGTCCAA+AGG 0.569966 8_4:-18580919 Msa1317340:intron
TTGGGAGACATGCAAAGAAG+AGG 0.578806 8_4:+18582839 None:intergenic
TACTGCTGAAACAAAGGAGG+AGG 0.583102 8_4:-18582218 Msa1317340:CDS
GTACGAAATAATCACAAACC+CGG 0.590236 8_4:+18580583 None:intergenic
TACATACCTGTAATTCCTGT+GGG 0.591415 8_4:+18581010 None:intergenic
CTTACCTCAGATGATGGAGG+AGG 0.618521 8_4:-18582131 Msa1317340:CDS
GTACATACCTGTAATTCCTG+TGG 0.624066 8_4:+18581009 None:intergenic
AGCTACTGCTGAAACAAAGG+AGG 0.625682 8_4:-18582221 Msa1317340:CDS
TACGAAATAATCACAAACCC+GGG 0.631214 8_4:+18580584 None:intergenic
ACATCCTCCTCCATCATCTG+AGG 0.640524 8_4:+18582127 None:intergenic
ACCACATAGTCAATGAGTCA+AGG 0.642220 8_4:+18580685 None:intergenic
GCCCTTACCTCAGATGATGG+AGG 0.648548 8_4:-18582134 Msa1317340:CDS
AGAAGGCCCAAAATGAATAG+GGG 0.671714 8_4:+18581035 None:intergenic
GTGCTTGAGCAGGTCCAAAG+GGG 0.705424 8_4:-18580917 Msa1317340:intron
AATGAACCTTCTGATCCACA+TGG 0.715867 8_4:+18583041 None:intergenic
ATATTGTCTCAAGAACCATG+TGG 0.787556 8_4:-18583056 Msa1317340:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAAATAAAAACATATAAT+AGG - chr8_4:18580695-18580714 Msa1317340:three_prime_UTR 10.0%
!!! TTTTATTTTGTTAGTTTAAT+TGG - chr8_4:18581173-18581192 Msa1317340:intron 10.0%
!! ATATCTTTACAAATATCTAT+GGG + chr8_4:18581251-18581270 None:intergenic 15.0%
!! AATATCTTTACAAATATCTA+TGG + chr8_4:18581252-18581271 None:intergenic 15.0%
!!! GATATTTGTAAAGATATTTT+AGG - chr8_4:18581254-18581273 Msa1317340:intron 15.0%
!!! TTAGCTTGATTTTATAAAAT+CGG - chr8_4:18581976-18581995 Msa1317340:intron 15.0%
!!! TTATGTTTAGATTTTATTTG+TGG - chr8_4:18582015-18582034 Msa1317340:intron 15.0%
!!! TTTATTTTTCAACTATTTTG+AGG + chr8_4:18582452-18582471 None:intergenic 15.0%
!! TCAAAATAGTTGAAAAATAA+AGG - chr8_4:18582451-18582470 Msa1317340:intron 15.0%
!! AATGAACATAATCAAAACTT+TGG - chr8_4:18581145-18581164 Msa1317340:intron 20.0%
!! TGTGATGTAATTAAAATTTG+TGG - chr8_4:18581399-18581418 Msa1317340:intron 20.0%
!! TTCAAAATAGCATTCAAAAT+AGG + chr8_4:18581722-18581741 None:intergenic 20.0%
!!! AAAGTGAACAACTATAATTT+TGG + chr8_4:18581777-18581796 None:intergenic 20.0%
!! AAATTATAGTTGTTCACTTT+CGG - chr8_4:18581777-18581796 Msa1317340:intron 20.0%
!! TACAATTTCAAATAATTCCA+CGG - chr8_4:18582353-18582372 Msa1317340:intron 20.0%
!! TTGATATTATGATTAACAGT+TGG - chr8_4:18582564-18582583 Msa1317340:CDS 20.0%
!!! TTCAAAACTTATTGTCTTTT+GGG - chr8_4:18582824-18582843 Msa1317340:CDS 20.0%
!!! TCGTATACAAATTTTCATTT+TGG - chr8_4:18582900-18582919 Msa1317340:CDS 20.0%
! ACATAATCAAAACTTTGGTT+TGG - chr8_4:18581150-18581169 Msa1317340:intron 25.0%
! AAATCAGTTAGACTATTTAG+TGG + chr8_4:18581371-18581390 None:intergenic 25.0%
! TCTAATATTGCTTTCAATGA+AGG + chr8_4:18581550-18581569 None:intergenic 25.0%
! AAAGAGAGTAATTTGAACAA+TGG + chr8_4:18581649-18581668 None:intergenic 25.0%
!!! TTGAATGCTATTTTGAAGTA+AGG - chr8_4:18581725-18581744 Msa1317340:intron 25.0%
!!! CTATAATTTTGGCGTTAAAT+TGG + chr8_4:18581766-18581785 None:intergenic 25.0%
!! AGCTAATTTTATATCACAGT+TGG + chr8_4:18581962-18581981 None:intergenic 25.0%
!!! GACCATAAACTTTTACTTTT+AGG - chr8_4:18582296-18582315 Msa1317340:intron 25.0%
! CTCCTAAAAGTAAAAGTTTA+TGG + chr8_4:18582301-18582320 None:intergenic 25.0%
! TTATCAAGAGCTTCAAATTA+TGG - chr8_4:18582512-18582531 Msa1317340:intron 25.0%
! TATTATGATTAACAGTTGGA+AGG - chr8_4:18582568-18582587 Msa1317340:CDS 25.0%
!! CTTCAAAACTTATTGTCTTT+TGG - chr8_4:18582823-18582842 Msa1317340:CDS 25.0%
AATAAACCAGTGACAGAAAA+TGG - chr8_4:18580669-18580688 Msa1317340:three_prime_UTR 30.0%
AAAACACAGAAGAATGCAAA+TGG - chr8_4:18580722-18580741 Msa1317340:three_prime_UTR 30.0%
! GTTGGGTATGATAACATTTT+GGG + chr8_4:18580829-18580848 None:intergenic 30.0%
! AGTTGGGTATGATAACATTT+TGG + chr8_4:18580830-18580849 None:intergenic 30.0%
CATAAATTGAGACATACCAA+AGG + chr8_4:18580873-18580892 None:intergenic 30.0%
! TCACACTGATTAAGTATGAT+TGG - chr8_4:18581281-18581300 Msa1317340:intron 30.0%
AATATCAGAGAGATCTTGTT+GGG + chr8_4:18581575-18581594 None:intergenic 30.0%
TTAGAAGTGATCAAACAAGT+TGG - chr8_4:18581834-18581853 Msa1317340:intron 30.0%
!! AAAATCGGTTTGAAGTGAAA+CGG - chr8_4:18581991-18582010 Msa1317340:intron 30.0%
!!! TGAAACATGGTTTTGTTAGA+AGG + chr8_4:18582427-18582446 None:intergenic 30.0%
!! CTATTTTGAGGATTGAAACA+TGG + chr8_4:18582440-18582459 None:intergenic 30.0%
TTCTTCTCATCAACTAGAAA+CGG + chr8_4:18582798-18582817 None:intergenic 30.0%
ATATTGTCTCAAGAACCATG+TGG - chr8_4:18580591-18580610 Msa1317340:three_prime_UTR 35.0%
!! TTTTTGTCAGAAGCATACGT+TGG + chr8_4:18580644-18580663 None:intergenic 35.0%
!! TTCTGTCACTGGTTTATTGA+TGG + chr8_4:18580667-18580686 None:intergenic 35.0%
! TCTATTCCATTTTCTGTCAC+TGG + chr8_4:18580678-18580697 None:intergenic 35.0%
!! ATTGGTGATGATGTTGAGTT+GGG + chr8_4:18580846-18580865 None:intergenic 35.0%
!! TATTGGTGATGATGTTGAGT+TGG + chr8_4:18580847-18580866 None:intergenic 35.0%
ATCATCACCAATACTACCTT+TGG - chr8_4:18580854-18580873 Msa1317340:CDS 35.0%
AGACATACCAAAGGTAGTAT+TGG + chr8_4:18580864-18580883 None:intergenic 35.0%
TTTAGCTACTGCTGAAACAA+AGG - chr8_4:18581423-18581442 Msa1317340:intron 35.0%
!!! TTCTTTACTGTTGCTGCTTT+TGG + chr8_4:18581469-18581488 None:intergenic 35.0%
AAAAGCAGCAACAGTAAAGA+AGG - chr8_4:18581468-18581487 Msa1317340:intron 35.0%
CAATATCAGAGAGATCTTGT+TGG + chr8_4:18581576-18581595 None:intergenic 35.0%
!!! TGATATTGAGCTGGTTTTTC+AGG - chr8_4:18581588-18581607 Msa1317340:intron 35.0%
! CTATATAACAAGGTACCCTA+TGG - chr8_4:18581696-18581715 Msa1317340:intron 35.0%
AGCATTCAAAATAGGCCATA+GGG + chr8_4:18581714-18581733 None:intergenic 35.0%
TAGCATTCAAAATAGGCCAT+AGG + chr8_4:18581715-18581734 None:intergenic 35.0%
!! ACACATACTTAGGGCATTTT+AGG + chr8_4:18581924-18581943 None:intergenic 35.0%
AAATGCCCTAAGTATGTGTT+TGG - chr8_4:18581925-18581944 Msa1317340:intron 35.0%
CTTGTCCAAACACATACTTA+GGG + chr8_4:18581933-18581952 None:intergenic 35.0%
ACTTGTCCAAACACATACTT+AGG + chr8_4:18581934-18581953 None:intergenic 35.0%
AAGTCATTGTCTTAGTTGTG+AGG + chr8_4:18582158-18582177 None:intergenic 35.0%
AAGCAATGACAAACACATAC+TGG - chr8_4:18582198-18582217 Msa1317340:CDS 35.0%
! CATCTGAGATAATGACCAAT+TGG + chr8_4:18582263-18582282 None:intergenic 35.0%
! GAAGGTTCCTTTCTGAAAAA+AGG - chr8_4:18582586-18582605 Msa1317340:CDS 35.0%
AAGAAGGCCCAAAATGAATA+GGG + chr8_4:18582616-18582635 None:intergenic 35.0%
AAAGAAGGCCCAAAATGAAT+AGG + chr8_4:18582617-18582636 None:intergenic 35.0%
TACATACCTGTAATTCCTGT+GGG + chr8_4:18582640-18582659 None:intergenic 35.0%
GGAATTGCTTTCTTAATAGC+AGG + chr8_4:18582672-18582691 None:intergenic 35.0%
CATTTAACTCGATGTAAGTG+AGG + chr8_4:18582693-18582712 None:intergenic 35.0%
!!! CTTTTGGGTTGAAAAACGTT+TGG - chr8_4:18582839-18582858 Msa1317340:CDS 35.0%
GAGAATCAATCTTTCCATAC+AGG + chr8_4:18582882-18582901 None:intergenic 35.0%
! CTCATTGACTATGTGGTATA+TGG - chr8_4:18582968-18582987 Msa1317340:five_prime_UTR 35.0%
AATGAACCTTCTGATCCACA+TGG + chr8_4:18580609-18580628 None:intergenic 40.0%
! CAAATGGCACTTTTGCTAAG+AGG - chr8_4:18580738-18580757 Msa1317340:three_prime_UTR 40.0%
AGATCTCTCTGATATTGAGC+TGG - chr8_4:18581579-18581598 Msa1317340:intron 40.0%
!!! GCTGGTTTTTCAGGACAATA+AGG - chr8_4:18581597-18581616 Msa1317340:intron 40.0%
TGATTGCGAATTTGCGATCT+CGG - chr8_4:18581673-18581692 Msa1317340:intron 40.0%
CAGTGAACCATCTTGATAAG+TGG - chr8_4:18582047-18582066 Msa1317340:intron 40.0%
CTATGGACCACTTATCAAGA+TGG + chr8_4:18582057-18582076 None:intergenic 40.0%
TCTTGATAAGTGGTCCATAG+TGG - chr8_4:18582057-18582076 Msa1317340:CDS 40.0%
! GATCTTCTACTTCTGAAGGA+CGG + chr8_4:18582121-18582140 None:intergenic 40.0%
CCTTCAGAAGTAGAAGATCA+CGG - chr8_4:18582122-18582141 Msa1317340:CDS 40.0%
TCTTAGTTGTGAGGATGAAG+AGG + chr8_4:18582149-18582168 None:intergenic 40.0%
TTTGCCTAACTGACACCAAT+TGG - chr8_4:18582245-18582264 Msa1317340:intron 40.0%
!! ATGACCAATTGGTGTCAGTT+AGG + chr8_4:18582252-18582271 None:intergenic 40.0%
GAAGTAACGTAAGTCATCAC+TGG - chr8_4:18582323-18582342 Msa1317340:intron 40.0%
! GCTTTTGATGCAACTGAATG+AGG + chr8_4:18582390-18582409 None:intergenic 40.0%
! AAGGCAACCCCTATTCATTT+TGG - chr8_4:18582605-18582624 Msa1317340:intron 40.0%
! AGGCAACCCCTATTCATTTT+GGG - chr8_4:18582606-18582625 Msa1317340:intron 40.0%
AGAAGGCCCAAAATGAATAG+GGG + chr8_4:18582615-18582634 None:intergenic 40.0%
TGTAATTCCTGTGGGAAAGA+AGG + chr8_4:18582632-18582651 None:intergenic 40.0%
TTCTTTCCCACAGGAATTAC+AGG - chr8_4:18582631-18582650 Msa1317340:intron 40.0%
GTACATACCTGTAATTCCTG+TGG + chr8_4:18582641-18582660 None:intergenic 40.0%
TAACAACTATGTGCTTGAGC+AGG - chr8_4:18582720-18582739 Msa1317340:intron 40.0%
TCTCTGTCATCTTACAACTC+AGG - chr8_4:18582756-18582775 Msa1317340:intron 40.0%
AAAAACGTTTGGCAGCACAA+GGG - chr8_4:18582850-18582869 Msa1317340:CDS 40.0%
CACAAGGGATTATTCCTGTA+TGG - chr8_4:18582865-18582884 Msa1317340:CDS 40.0%
! ACCTTGACTCATTGACTATG+TGG - chr8_4:18582961-18582980 Msa1317340:five_prime_UTR 40.0%
ACCACATAGTCAATGAGTCA+AGG + chr8_4:18582965-18582984 None:intergenic 40.0%
CAAGAACCATGTGGATCAGA+AGG - chr8_4:18580600-18580619 Msa1317340:three_prime_UTR 45.0%
! TTGTCAGAAGCATACGTTGG+AGG + chr8_4:18580641-18580660 None:intergenic 45.0%
! ATGGCACTTTTGCTAAGAGG+TGG - chr8_4:18580741-18580760 Msa1317340:three_prime_UTR 45.0%
TTGGGAGACATGCAAAGAAG+AGG + chr8_4:18580811-18580830 None:intergenic 45.0%
AGCTACTGCTGAAACAAAGG+AGG - chr8_4:18581426-18581445 Msa1317340:intron 45.0%
TACTGCTGAAACAAAGGAGG+AGG - chr8_4:18581429-18581448 Msa1317340:intron 45.0%
TAAGCCCTTACCTCAGATGA+TGG - chr8_4:18581510-18581529 Msa1317340:intron 45.0%
! TCCTCCATCATCTGAGGTAA+GGG + chr8_4:18581517-18581536 None:intergenic 45.0%
GCGATCTCGGCTATATAACA+AGG - chr8_4:18581686-18581705 Msa1317340:intron 45.0%
TGAGAAGTTGAGAGCTCCAA+AGG - chr8_4:18581873-18581892 Msa1317340:intron 45.0%
GAGAAGTTGAGAGCTCCAAA+GGG - chr8_4:18581874-18581893 Msa1317340:intron 45.0%
AGAAGTTGAGAGCTCCAAAG+GGG - chr8_4:18581875-18581894 Msa1317340:intron 45.0%
!! ATAAGTGGTCCATAGTGGAC+TGG - chr8_4:18582062-18582081 Msa1317340:CDS 45.0%
! TTTCAAGTGCCAGTCCACTA+TGG + chr8_4:18582074-18582093 None:intergenic 45.0%
CCGTGATCTTCTACTTCTGA+AGG + chr8_4:18582125-18582144 None:intergenic 45.0%
!!! GGGGTTGCCTTTTTTCAGAA+AGG + chr8_4:18582596-18582615 None:intergenic 45.0%
GATGACAGAGAAAACCCCTT+TGG + chr8_4:18582747-18582766 None:intergenic 45.0%
GAAAAACGTTTGGCAGCACA+AGG - chr8_4:18582849-18582868 Msa1317340:CDS 45.0%
! CACGTTTGTTGATGAATGCC+CGG - chr8_4:18583045-18583064 Msa1317340:five_prime_UTR 45.0%
! ACGTTTGTTGATGAATGCCC+GGG - chr8_4:18583046-18583065 Msa1317340:five_prime_UTR 45.0%
! TTGCTAAGAGGTGGAGCACT+TGG - chr8_4:18580750-18580769 Msa1317340:three_prime_UTR 50.0%
! ATCTGAGGTAAGGGCTTAGC+TGG + chr8_4:18581508-18581527 None:intergenic 50.0%
! CTCCTCCATCATCTGAGGTA+AGG + chr8_4:18581518-18581537 None:intergenic 50.0%
!! CTTACCTCAGATGATGGAGG+AGG - chr8_4:18581516-18581535 Msa1317340:intron 50.0%
ACATCCTCCTCCATCATCTG+AGG + chr8_4:18581523-18581542 None:intergenic 50.0%
GAAGTTGAGAGCTCCAAAGG+GGG - chr8_4:18581876-18581895 Msa1317340:intron 50.0%
TTTGAGCTCCTAACCCCCTT+TGG + chr8_4:18581892-18581911 None:intergenic 50.0%
ATGAGGCAACTTCTACACCG+TGG + chr8_4:18582373-18582392 None:intergenic 50.0%
! TTTTGGGCCTTCTTTCCCAC+AGG - chr8_4:18582622-18582641 Msa1317340:intron 50.0%
ATGTGCTTGAGCAGGTCCAA+AGG - chr8_4:18582728-18582747 Msa1317340:intron 50.0%
TGTGCTTGAGCAGGTCCAAA+GGG - chr8_4:18582729-18582748 Msa1317340:intron 50.0%
! GGCTTAGCTGGAGCTTTAGC+AGG + chr8_4:18581496-18581515 None:intergenic 55.0%
! GCCCTTACCTCAGATGATGG+AGG - chr8_4:18581513-18581532 Msa1317340:intron 55.0%
TGAGAGCTCCAAAGGGGGTT+AGG - chr8_4:18581881-18581900 Msa1317340:intron 55.0%
TCTGAAGGACGGAGAGTCGT+TGG + chr8_4:18582110-18582129 None:intergenic 55.0%
GTGCTTGAGCAGGTCCAAAG+GGG - chr8_4:18582730-18582749 Msa1317340:intron 55.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 18580586 18583083 18580586 ID=Msa1317340;Name=Msa1317340
chr8_4 mRNA 18580586 18583083 18580586 ID=Msa1317340-mRNA-1;Parent=Msa1317340;Name=Msa1317340-mRNA-1;_AED=0.03;_eAED=0.03;_QI=149|1|1|1|1|1|5|187|211
chr8_4 exon 18580586 18580927 18580586 ID=Msa1317340-mRNA-1:exon:6829;Parent=Msa1317340-mRNA-1
chr8_4 exon 18581017 18581086 18581017 ID=Msa1317340-mRNA-1:exon:6828;Parent=Msa1317340-mRNA-1
chr8_4 exon 18582051 18582241 18582051 ID=Msa1317340-mRNA-1:exon:6827;Parent=Msa1317340-mRNA-1
chr8_4 exon 18582536 18582614 18582536 ID=Msa1317340-mRNA-1:exon:6826;Parent=Msa1317340-mRNA-1
chr8_4 exon 18582794 18583083 18582794 ID=Msa1317340-mRNA-1:exon:6825;Parent=Msa1317340-mRNA-1
chr8_4 five_prime_UTR 18582935 18583083 18582935 ID=Msa1317340-mRNA-1:five_prime_utr;Parent=Msa1317340-mRNA-1
chr8_4 CDS 18582794 18582934 18582794 ID=Msa1317340-mRNA-1:cds;Parent=Msa1317340-mRNA-1
chr8_4 CDS 18582536 18582614 18582536 ID=Msa1317340-mRNA-1:cds;Parent=Msa1317340-mRNA-1
chr8_4 CDS 18582051 18582241 18582051 ID=Msa1317340-mRNA-1:cds;Parent=Msa1317340-mRNA-1
chr8_4 CDS 18581017 18581086 18581017 ID=Msa1317340-mRNA-1:cds;Parent=Msa1317340-mRNA-1
chr8_4 CDS 18580773 18580927 18580773 ID=Msa1317340-mRNA-1:cds;Parent=Msa1317340-mRNA-1
chr8_4 three_prime_UTR 18580586 18580772 18580586 ID=Msa1317340-mRNA-1:three_prime_utr;Parent=Msa1317340-mRNA-1
Gene Sequence

>Msa1317340

ATGCAAATGGCACTTTTGCTAAGAGGTGGAGCACTTGGAGATTCTAGCTTTCGTTTGTGTTCTATATCTTCAACCTCTTCTTTGCATGTCTCCCAAAATGTTATCATACCCAACTCAACATCATCACCAATACTACCTTTGATTGCAAGTAGATTTAAAGCAGTAAGCAGAAACAAGATTAATTGCTCTGCAGTTCAAGAATCATCTACTAGTACATCAACTACTGCTGAAACAAAGGAGGAGGTTAAAGCAGAAGCTCCAAAAGCAGCAACAGTAAAGAAGGCTCCTGCTAAAGCTCCAGCTAAGCCCTTACCTCAGATGATGGAGGAGGATGTGATTCCTTCATTGAAAGCAATATTAGAAGCCCAACAAGATCTCTCTGATATTGAGCTGGTTTTTCAGGACAATAAGTTGGAAGGTTCCTTTCTGAAAAAAGGCAACCCCTATTCATTTTGGGCCTTCTTTCCCACAGGAATTACAGGTCCAAAGGGGTTTTCTCTGTCATCTTACAACTCAGGAGCAAGCACTGTTGAACCGTTTCTAGTTGATGAGAAGAAAGTTACTTCAAAACTTATTGTCTTTTGGGTTGAAAAACGTTTGGCAGCACAAGGGATTATTCCTGTATGGAAAGATTGA

Protein sequence

>Msa1317340

MQMALLLRGGALGDSSFRLCSISSTSSLHVSQNVIIPNSTSSPILPLIASRFKAVSRNKINCSAVQESSTSTSTTAETKEEVKAEAPKAATVKKAPAKAPAKPLPQMMEEDVIPSLKAILEAQQDLSDIELVFQDNKLEGSFLKKGNPYSFWAFFPTGITGPKGFSLSSYNSGASTVEPFLVDEKKVTSKLIVFWVEKRLAAQGIIPVWKD*