Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0951400 | KEH26160.1 | 79.032 | 372 | 15 | 3 | 3 | 374 | 102 | 410 | 0.0 | 561 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0951400 | sp|Q67XQ0|Y4424_ARATH | 62.703 | 370 | 78 | 5 | 4 | 370 | 107 | 419 | 1.79e-142 | 417 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007470 | Msa0951400 | 0.804879 | 1.747717e-49 | -8.615850e-47 |
| Msa0015460 | Msa0951400 | 0.807760 | 4.318525e-50 | -8.615850e-47 |
| Msa0018070 | Msa0951400 | 0.819179 | 1.330761e-52 | -8.615850e-47 |
| Msa0037540 | Msa0951400 | -0.816678 | 4.884881e-52 | -8.615850e-47 |
| Msa0037590 | Msa0951400 | -0.815906 | 7.269720e-52 | -8.615850e-47 |
| Msa0061500 | Msa0951400 | 0.810273 | 1.251206e-50 | -8.615850e-47 |
| Msa0065010 | Msa0951400 | 0.803055 | 4.183282e-49 | -8.615850e-47 |
| Msa0109590 | Msa0951400 | 0.806510 | 7.943177e-50 | -8.615850e-47 |
| Msa0118540 | Msa0951400 | 0.835883 | 1.294848e-56 | -8.615850e-47 |
| Msa0609220 | Msa0951400 | 0.819696 | 1.014085e-52 | -8.615850e-47 |
| Msa0626850 | Msa0951400 | 0.833308 | 5.745035e-56 | -8.615850e-47 |
| Msa0629650 | Msa0951400 | 0.811015 | 8.649154e-51 | -8.615850e-47 |
| Msa0638350 | Msa0951400 | 0.805110 | 1.563379e-49 | -8.615850e-47 |
| Msa0643320 | Msa0951400 | 0.810249 | 1.266163e-50 | -8.615850e-47 |
| Msa0664970 | Msa0951400 | 0.837074 | 6.440733e-57 | -8.615850e-47 |
| Msa0683140 | Msa0951400 | 0.822434 | 2.373617e-53 | -8.615850e-47 |
| Msa0683600 | Msa0951400 | 0.814180 | 1.756976e-51 | -8.615850e-47 |
| Msa0689780 | Msa0951400 | 0.814124 | 1.807147e-51 | -8.615850e-47 |
| Msa0711150 | Msa0951400 | 0.814464 | 1.520201e-51 | -8.615850e-47 |
| Msa0715410 | Msa0951400 | 0.822821 | 1.929150e-53 | -8.615850e-47 |
| Msa0748070 | Msa0951400 | 0.811964 | 5.378492e-51 | -8.615850e-47 |
| Msa0784860 | Msa0951400 | 0.800106 | 1.683587e-48 | -8.615850e-47 |
| Msa0826760 | Msa0951400 | 0.803333 | 3.664551e-49 | -8.615850e-47 |
| Msa0836050 | Msa0951400 | 0.801426 | 9.055843e-49 | -8.615850e-47 |
| Msa0129190 | Msa0951400 | -0.814973 | 1.172612e-51 | -8.615850e-47 |
| Msa0150990 | Msa0951400 | 0.813382 | 2.632496e-51 | -8.615850e-47 |
| Msa0189610 | Msa0951400 | 0.824658 | 7.162525e-54 | -8.615850e-47 |
| Msa0197530 | Msa0951400 | 0.803989 | 2.678492e-49 | -8.615850e-47 |
| Msa0217290 | Msa0951400 | 0.814642 | 1.388505e-51 | -8.615850e-47 |
| Msa0220080 | Msa0951400 | 0.816407 | 5.617685e-52 | -8.615850e-47 |
| Msa0364720 | Msa0951400 | 0.810643 | 1.041063e-50 | -8.615850e-47 |
| Msa0369920 | Msa0951400 | 0.802406 | 5.695047e-49 | -8.615850e-47 |
| Msa0385490 | Msa0951400 | 0.806782 | 6.960414e-50 | -8.615850e-47 |
| Msa0386040 | Msa0951400 | 0.806479 | 8.062097e-50 | -8.615850e-47 |
| Msa0387910 | Msa0951400 | 0.801430 | 9.036973e-49 | -8.615850e-47 |
| Msa0429950 | Msa0951400 | 0.811569 | 6.557236e-51 | -8.615850e-47 |
| Msa0435690 | Msa0951400 | 0.809866 | 1.530774e-50 | -8.615850e-47 |
| Msa0436920 | Msa0951400 | -0.822638 | 2.128049e-53 | -8.615850e-47 |
| Msa0467220 | Msa0951400 | 0.805894 | 1.070942e-49 | -8.615850e-47 |
| Msa0469620 | Msa0951400 | -0.816550 | 5.219642e-52 | -8.615850e-47 |
| Msa0239060 | Msa0951400 | 0.812485 | 4.140365e-51 | -8.615850e-47 |
| Msa0261360 | Msa0951400 | 0.830297 | 3.179802e-55 | -8.615850e-47 |
| Msa0296820 | Msa0951400 | 0.834103 | 3.636814e-56 | -8.615850e-47 |
| Msa0319290 | Msa0951400 | 0.822090 | 2.852333e-53 | -8.615850e-47 |
| Msa0340690 | Msa0951400 | 0.832951 | 7.051773e-56 | -8.615850e-47 |
| Msa0340710 | Msa0951400 | 0.839348 | 1.672558e-57 | -8.615850e-47 |
| Msa0347750 | Msa0951400 | 0.817211 | 3.708786e-52 | -8.615850e-47 |
| Msa0358860 | Msa0951400 | 0.816269 | 6.032509e-52 | -8.615850e-47 |
| Msa0500720 | Msa0951400 | 0.808660 | 2.777512e-50 | -8.615850e-47 |
| Msa0509670 | Msa0951400 | 0.813564 | 2.401566e-51 | -8.615850e-47 |
| Msa0530100 | Msa0951400 | 0.805901 | 1.067032e-49 | -8.615850e-47 |
| Msa0532540 | Msa0951400 | 0.807884 | 4.064673e-50 | -8.615850e-47 |
| Msa0582280 | Msa0951400 | 0.812423 | 4.272098e-51 | -8.615850e-47 |
| Msa0587030 | Msa0951400 | 0.824370 | 8.374403e-54 | -8.615850e-47 |
| Msa0589390 | Msa0951400 | 0.819646 | 1.041304e-52 | -8.615850e-47 |
| Msa0597000 | Msa0951400 | 0.807170 | 5.761328e-50 | -8.615850e-47 |
| Msa0602370 | Msa0951400 | 0.824860 | 6.420368e-54 | -8.615850e-47 |
| Msa0861470 | Msa0951400 | 0.814284 | 1.666011e-51 | -8.615850e-47 |
| Msa0861570 | Msa0951400 | 0.818486 | 1.911842e-52 | -8.615850e-47 |
| Msa0886840 | Msa0951400 | 0.817793 | 2.742418e-52 | -8.615850e-47 |
| Msa0888990 | Msa0951400 | 0.849059 | 4.122227e-60 | -8.615850e-47 |
| Msa0901320 | Msa0951400 | 0.823866 | 1.099607e-53 | -8.615850e-47 |
| Msa0914610 | Msa0951400 | 0.804679 | 1.924242e-49 | -8.615850e-47 |
| Msa0944610 | Msa0951400 | 0.820469 | 6.746109e-53 | -8.615850e-47 |
| Msa0944870 | Msa0951400 | 0.815598 | 8.517260e-52 | -8.615850e-47 |
| Msa0951400 | Msa1000930 | 0.804531 | 2.065607e-49 | -8.615850e-47 |
| Msa0951400 | Msa1007230 | 0.804893 | 1.735715e-49 | -8.615850e-47 |
| Msa0951400 | Msa1025080 | 0.814838 | 1.256520e-51 | -8.615850e-47 |
| Msa0951400 | Msa1034290 | 0.808305 | 3.306742e-50 | -8.615850e-47 |
| Msa0951400 | Msa1064250 | 0.847248 | 1.303966e-59 | -8.615850e-47 |
| Msa0951400 | Msa1071320 | 0.813314 | 2.724639e-51 | -8.615850e-47 |
| Msa0951400 | Msa1072900 | 0.801197 | 1.008615e-48 | -8.615850e-47 |
| Msa0951400 | Msa1076960 | 0.800464 | 1.423813e-48 | -8.615850e-47 |
| Msa0951400 | Msa1088290 | 0.804429 | 2.169507e-49 | -8.615850e-47 |
| Msa0951400 | Msa1093100 | 0.812394 | 4.334802e-51 | -8.615850e-47 |
| Msa0951400 | Msa1109090 | 0.809325 | 2.001279e-50 | -8.615850e-47 |
| Msa0951400 | Msa1115280 | 0.805535 | 1.273758e-49 | -8.615850e-47 |
| Msa0951400 | Msa1122860 | 0.800800 | 1.216165e-48 | -8.615850e-47 |
| Msa0951400 | Msa1133230 | 0.834666 | 2.626730e-56 | -8.615850e-47 |
| Msa0951400 | Msa1133250 | 0.833553 | 4.992911e-56 | -8.615850e-47 |
| Msa0951400 | Msa1152920 | 0.824274 | 8.820818e-54 | -8.615850e-47 |
| Msa0951400 | Msa1163540 | 0.808219 | 3.448275e-50 | -8.615850e-47 |
| Msa0951400 | Msa1164020 | 0.801857 | 7.386641e-49 | -8.615850e-47 |
| Msa0951400 | Msa1177780 | 0.807654 | 4.547165e-50 | -8.615850e-47 |
| Msa0951400 | Msa1178760 | 0.830545 | 2.765477e-55 | -8.615850e-47 |
| Msa0951400 | Msa1180500 | 0.810327 | 1.217996e-50 | -8.615850e-47 |
| Msa0951400 | Msa1225100 | 0.812995 | 3.201146e-51 | -8.615850e-47 |
| Msa0951400 | Msa1253810 | 0.819467 | 1.143885e-52 | -8.615850e-47 |
| Msa0951400 | Msa1274560 | 0.845222 | 4.647526e-59 | -8.615850e-47 |
| Msa0951400 | Msa1276340 | 0.817191 | 3.748523e-52 | -8.615850e-47 |
| Msa0951400 | Msa1295330 | 0.800216 | 1.599178e-48 | -8.615850e-47 |
| Msa0951400 | Msa1306560 | 0.810337 | 1.211914e-50 | -8.615850e-47 |
| Msa0951400 | Msa1312520 | 0.807564 | 4.753293e-50 | -8.615850e-47 |
| Msa0951400 | Msa1329870 | 0.812387 | 4.350176e-51 | -8.615850e-47 |
| Msa0951400 | Msa1338400 | 0.801362 | 9.331543e-49 | -8.615850e-47 |
| Msa0951400 | Msa1355890 | 0.837219 | 5.914969e-57 | -8.615850e-47 |
| Msa0951400 | Msa1358670 | 0.806896 | 6.583991e-50 | -8.615850e-47 |
| Msa0951400 | Msa1364940 | 0.803172 | 3.957258e-49 | -8.615850e-47 |
| Msa0951400 | Msa1367490 | 0.816937 | 4.274937e-52 | -8.615850e-47 |
| Msa0951400 | Msa1371940 | 0.803031 | 4.232246e-49 | -8.615850e-47 |
| Msa0951400 | Msa1381480 | 0.812012 | 5.250876e-51 | -8.615850e-47 |
| Msa0951400 | Msa1381650 | 0.809311 | 2.015018e-50 | -8.615850e-47 |
| Msa0951400 | Msa1382790 | 0.802608 | 5.175576e-49 | -8.615850e-47 |
| Msa0951400 | Msa1388830 | 0.807642 | 4.575257e-50 | -8.615850e-47 |
| Msa0951400 | Msa1405220 | 0.820132 | 8.060832e-53 | -8.615850e-47 |
| Msa0951400 | Msa1420270 | 0.817377 | 3.403556e-52 | -8.615850e-47 |
| Msa0951400 | Msa1422810 | 0.815860 | 7.443805e-52 | -8.615850e-47 |
| Msa0951400 | Msa1424620 | 0.814419 | 1.555581e-51 | -8.615850e-47 |
| Msa0951400 | Msa1430130 | 0.811376 | 7.220330e-51 | -8.615850e-47 |
| Msa0951400 | Msa1454450 | 0.824610 | 7.352030e-54 | -8.615850e-47 |
| Msa0951400 | Msa1454950 | 0.824360 | 8.419214e-54 | -8.615850e-47 |
| Msa0951400 | Msa1457160 | 0.845758 | 3.325816e-59 | -8.615850e-47 |
| Msa0951400 | Msa1460320 | -0.815927 | 7.194842e-52 | -8.615850e-47 |
| Msa0951400 | Msa1460750 | 0.813522 | 2.453225e-51 | -8.615850e-47 |
| Msa0951400 | Msa1461550 | 0.803641 | 3.163477e-49 | -8.615850e-47 |
| Msa0951400 | Msa1462360 | 0.804563 | 2.034813e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0951400 | MtrunA17_Chr6g0467811 | 78.804 | 368 | 15 | 3 | 3 | 370 | 102 | 406 | 0.0 | 551 |
| Msa0951400 | MtrunA17_Chr4g0065751 | 75.749 | 367 | 42 | 1 | 4 | 370 | 107 | 426 | 0.0 | 540 |
| Msa0951400 | MtrunA17_Chr7g0259621 | 54.737 | 380 | 107 | 7 | 4 | 370 | 107 | 434 | 3.46e-123 | 364 |
| Msa0951400 | MtrunA17_Chr4g0049251 | 45.932 | 381 | 139 | 5 | 4 | 370 | 84 | 411 | 3.14e-103 | 311 |
| Msa0951400 | MtrunA17_Chr2g0280251 | 43.832 | 381 | 151 | 5 | 4 | 370 | 84 | 415 | 5.34e-92 | 283 |
| Msa0951400 | MtrunA17_Chr7g0217521 | 59.184 | 245 | 53 | 1 | 3 | 247 | 106 | 303 | 6.23e-91 | 276 |
| Msa0951400 | MtrunA17_Chr3g0141551 | 38.718 | 390 | 160 | 6 | 4 | 370 | 84 | 417 | 3.55e-82 | 259 |
| Msa0951400 | MtrunA17_Chr6g0469911 | 39.895 | 381 | 156 | 6 | 4 | 370 | 106 | 427 | 6.88e-80 | 253 |
| Msa0951400 | MtrunA17_Chr6g0469771 | 42.449 | 245 | 93 | 2 | 4 | 247 | 85 | 282 | 1.14e-64 | 207 |
| Msa0951400 | MtrunA17_Chr7g0217531 | 66.154 | 130 | 39 | 1 | 245 | 374 | 4 | 128 | 1.47e-50 | 166 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0951400 | AT4G14240.3 | 62.703 | 370 | 78 | 5 | 4 | 370 | 3 | 315 | 1.24e-144 | 416 |
| Msa0951400 | AT4G14240.1 | 62.703 | 370 | 78 | 5 | 4 | 370 | 107 | 419 | 1.82e-143 | 417 |
| Msa0951400 | AT4G14240.2 | 62.703 | 370 | 78 | 5 | 4 | 370 | 98 | 410 | 2.09e-143 | 416 |
| Msa0951400 | AT4G14230.1 | 59.128 | 367 | 98 | 2 | 4 | 370 | 106 | 420 | 8.65e-139 | 405 |
| Msa0951400 | AT1G03270.1 | 59.030 | 371 | 98 | 4 | 4 | 370 | 105 | 425 | 2.70e-134 | 394 |
| Msa0951400 | AT4G33700.3 | 44.357 | 381 | 144 | 7 | 4 | 370 | 1 | 327 | 5.17e-93 | 283 |
| Msa0951400 | AT5G52790.3 | 43.817 | 372 | 134 | 6 | 4 | 373 | 85 | 383 | 1.96e-92 | 283 |
| Msa0951400 | AT5G52790.2 | 43.817 | 372 | 134 | 6 | 4 | 373 | 85 | 383 | 1.96e-92 | 283 |
| Msa0951400 | AT4G33700.1 | 44.357 | 381 | 144 | 7 | 4 | 370 | 84 | 410 | 2.68e-92 | 283 |
| Msa0951400 | AT2G14520.2 | 44.054 | 370 | 154 | 6 | 4 | 370 | 84 | 403 | 2.98e-92 | 283 |
| Msa0951400 | AT5G52790.4 | 42.602 | 392 | 141 | 7 | 4 | 384 | 85 | 403 | 6.10e-92 | 282 |
| Msa0951400 | AT5G52790.5 | 43.850 | 374 | 135 | 6 | 4 | 375 | 85 | 385 | 7.17e-92 | 283 |
| Msa0951400 | AT2G14520.3 | 42.819 | 376 | 156 | 6 | 4 | 370 | 1 | 326 | 1.02e-90 | 276 |
| Msa0951400 | AT5G52790.1 | 43.902 | 369 | 132 | 6 | 4 | 370 | 85 | 380 | 1.23e-90 | 281 |
| Msa0951400 | AT2G14520.4 | 42.819 | 376 | 156 | 6 | 4 | 370 | 84 | 409 | 2.56e-90 | 278 |
| Msa0951400 | AT2G14520.1 | 42.819 | 376 | 156 | 6 | 4 | 370 | 84 | 409 | 2.56e-90 | 278 |
| Msa0951400 | AT1G47330.2 | 40.609 | 394 | 159 | 6 | 4 | 370 | 3 | 348 | 9.47e-89 | 275 |
| Msa0951400 | AT1G47330.1 | 40.609 | 394 | 159 | 6 | 4 | 370 | 84 | 429 | 1.46e-87 | 275 |
| Msa0951400 | AT4G33700.2 | 48.980 | 245 | 77 | 3 | 4 | 247 | 84 | 281 | 1.71e-72 | 228 |
Find 110 sgRNAs with CRISPR-Local
Find 470 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAATCCCAGGAATATTAT+TGG | 0.213736 | 6_3:+42109906 | Msa0951400:CDS |
| CCATATGACTATTTCCCTTT+TGG | 0.240744 | 6_3:-42110241 | None:intergenic |
| CTGACAGGGGTCTCTGATTC+AGG | 0.253158 | 6_3:-42110062 | None:intergenic |
| TCTCTGTAATGCTGTTTCTA+TGG | 0.280661 | 6_3:+42105986 | Msa0951400:five_prime_UTR |
| GTCAAGCCTTCAAAGCTTAC+TGG | 0.302358 | 6_3:+42110422 | Msa0951400:CDS |
| AAAGCTCTTGTCTCCATTCA+TGG | 0.311809 | 6_3:+42108209 | Msa0951400:CDS |
| ACCAACGAAGGCATACCTTT+TGG | 0.342222 | 6_3:+42105368 | Msa0951400:five_prime_UTR |
| CAGGTTCTGGATTGCGTACT+GGG | 0.343310 | 6_3:+42108152 | Msa0951400:intron |
| TCAGGTTCTGGATTGCGTAC+TGG | 0.343532 | 6_3:+42108151 | Msa0951400:intron |
| AAAATCCCAGGAATATTATT+GGG | 0.347890 | 6_3:+42109907 | Msa0951400:CDS |
| TAAAAGCCCAATAATATTCC+TGG | 0.351419 | 6_3:-42109913 | None:intergenic |
| AAATATCTATCTGTCTGGTT+CGG | 0.359768 | 6_3:-42105269 | None:intergenic |
| TTATTGCCAGTAAGCTTTGA+AGG | 0.366582 | 6_3:-42110428 | None:intergenic |
| AAAGAAAATGTTGATTCAAT+AGG | 0.371631 | 6_3:-42108891 | None:intergenic |
| TACTCCATTGCTACAAGAAC+TGG | 0.375041 | 6_3:+42110367 | Msa0951400:CDS |
| AATATCTATCTGTCTGGTTC+GGG | 0.378604 | 6_3:-42105268 | None:intergenic |
| CTTGATTGAAGAGTTTATCT+AGG | 0.383532 | 6_3:-42107740 | None:intergenic |
| CTATCTGTCTGGTTCGGGTT+AGG | 0.387155 | 6_3:-42105263 | None:intergenic |
| AAGAGTTTATCTAGGTATAG+AGG | 0.389663 | 6_3:-42107732 | None:intergenic |
| ATGTTACCCTCTTTCTTATC+CGG | 0.389771 | 6_3:+42108011 | Msa0951400:CDS |
| ATCTCAAATCAGGGAGGCAT+TGG | 0.390658 | 6_3:+42109839 | Msa0951400:intron |
| CCTTCTTACGAAAATATTCA+TGG | 0.392818 | 6_3:+42110494 | Msa0951400:CDS |
| CTCTTTGCCGGAGTCATGTC+CGG | 0.396365 | 6_3:+42105437 | Msa0951400:five_prime_UTR |
| CAAGCAATTTGTAGTAGATA+TGG | 0.402882 | 6_3:+42107937 | Msa0951400:CDS |
| TTATGCAGCGATCATTCTTC+CGG | 0.415941 | 6_3:+42105926 | Msa0951400:intron |
| AACAAGAAAACAGCATATTC+CGG | 0.426683 | 6_3:-42105414 | None:intergenic |
| TTTAGATATGTGCATGCCCT+TGG | 0.426790 | 6_3:+42110584 | Msa0951400:CDS |
| TTTAGATGTTAATTCAAAGT+TGG | 0.434582 | 6_3:+42108911 | Msa0951400:CDS |
| GGAACGACGAGGCTTTATTT+AGG | 0.438067 | 6_3:+42108174 | Msa0951400:CDS |
| GATTATTCAAAGTTGAAAAG+TGG | 0.447614 | 6_3:+42105171 | None:intergenic |
| CACTACGTTCAAGAATTTCA+AGG | 0.449665 | 6_3:-42105496 | None:intergenic |
| AATATTCATGGTGAAGTGAT+TGG | 0.459543 | 6_3:+42110506 | Msa0951400:CDS |
| CCAAAAGGGAAATAGTCATA+TGG | 0.467713 | 6_3:+42110241 | Msa0951400:CDS |
| AGTTGAAAAGTGGGAAAGGA+AGG | 0.469193 | 6_3:+42105181 | Msa0951400:five_prime_UTR |
| TTATACCTCCATGCCATGAA+TGG | 0.470063 | 6_3:-42108222 | None:intergenic |
| GTAGAATTTACCTTTCCAAC+CGG | 0.473889 | 6_3:-42108030 | None:intergenic |
| TACCCTCTTTCTTATCCGGT+TGG | 0.476027 | 6_3:+42108015 | Msa0951400:CDS |
| ATTATTCAAAGTTGAAAAGT+GGG | 0.476349 | 6_3:+42105172 | None:intergenic |
| TATACTGAACGAGTTCCAAA+AGG | 0.480137 | 6_3:+42110226 | Msa0951400:CDS |
| TATTGAAATATCTATCTGTC+TGG | 0.481249 | 6_3:-42105274 | None:intergenic |
| CGGATAGATACTGCACTGAC+AGG | 0.486816 | 6_3:-42110077 | None:intergenic |
| TCATCTAGTGGGTATTCATA+TGG | 0.489386 | 6_3:-42109306 | None:intergenic |
| CTTTCAAATGTACAATATGC+AGG | 0.493441 | 6_3:+42107704 | Msa0951400:exon |
| AGTGATTGGTATTATCACTT+TGG | 0.495868 | 6_3:+42110520 | Msa0951400:CDS |
| CTGTCAGTGCAGTATCTATC+CGG | 0.501210 | 6_3:+42110078 | Msa0951400:CDS |
| GTCATGTCCGGTCTCACACT+TGG | 0.509099 | 6_3:+42105449 | Msa0951400:five_prime_UTR |
| GTTGTGAAGACTACCGGAAA+AGG | 0.512912 | 6_3:+42110269 | Msa0951400:CDS |
| ATGTTAATTCAAAGTTGGAC+TGG | 0.514990 | 6_3:+42108916 | Msa0951400:CDS |
| TCTCAAATCAGGGAGGCATT+GGG | 0.517004 | 6_3:+42109840 | Msa0951400:intron |
| GAATCCAGTTCTTGTAGCAA+TGG | 0.517698 | 6_3:-42110371 | None:intergenic |
| CATGAGACCAAGTGTGAGAC+CGG | 0.518128 | 6_3:-42105456 | None:intergenic |
| TTCTCTTCATCAATTAGTTG+CGG | 0.525530 | 6_3:-42110302 | None:intergenic |
| AGCACTTGATTTGACCGAAA+AGG | 0.528383 | 6_3:+42108406 | Msa0951400:CDS |
| ACGCACAAGCCATGAAAAGT+TGG | 0.534177 | 6_3:-42107974 | None:intergenic |
| TCGTTCAGTATATCGTATAG+AGG | 0.534507 | 6_3:-42110215 | None:intergenic |
| AAAAGCCCAATAATATTCCT+GGG | 0.537470 | 6_3:-42109912 | None:intergenic |
| ATTGTACATTTGAAAGCCAA+TGG | 0.541490 | 6_3:-42107697 | None:intergenic |
| AAACACACCGTGGTATTCTC+CGG | 0.544224 | 6_3:-42110097 | None:intergenic |
| TGGGAAAGATTCTTGCCCGC+GGG | 0.549753 | 6_3:+42109859 | Msa0951400:CDS |
| AGTAGATATGGTCTCGCTGT+AGG | 0.551405 | 6_3:+42107949 | Msa0951400:CDS |
| CTGGTTCGGGTTAGGATCCA+AGG | 0.552869 | 6_3:-42105255 | None:intergenic |
| CTGTCTATTCTCAAAATCCC+AGG | 0.554478 | 6_3:+42109895 | Msa0951400:CDS |
| CTGTAATGCTGTTTCTATGG+AGG | 0.556264 | 6_3:+42105989 | Msa0951400:five_prime_UTR |
| TCTTTCTTATCCGGTTGGAA+AGG | 0.558257 | 6_3:+42108020 | Msa0951400:CDS |
| TCAAAGTTGAAAAGTGGGAA+AGG | 0.558298 | 6_3:+42105177 | None:intergenic |
| TGCCTTCGTTGGTGAGAGCA+AGG | 0.559592 | 6_3:-42105358 | None:intergenic |
| GAAGCAGAGTAACAAGAAGC+TGG | 0.561473 | 6_3:-42105965 | None:intergenic |
| GTGGAACGGTGCTGTTCACA+AGG | 0.562367 | 6_3:-42109284 | None:intergenic |
| TCGTATAGAGGCATATCAGA+TGG | 0.565213 | 6_3:-42110203 | None:intergenic |
| TATCTACTACAAATTGCTTG+TGG | 0.565273 | 6_3:-42107934 | None:intergenic |
| ATCCATGTTGCAGATCCAAA+AGG | 0.568878 | 6_3:-42105383 | None:intergenic |
| CTTGAAATTCTTGAACGTAG+TGG | 0.572868 | 6_3:+42105497 | Msa0951400:five_prime_UTR |
| TCCAAAAGGTATGCCTTCGT+TGG | 0.579698 | 6_3:-42105369 | None:intergenic |
| TTTCCAACCGGATAAGAAAG+AGG | 0.579776 | 6_3:-42108018 | None:intergenic |
| GGTCGCAATGATCATGTAGC+GGG | 0.587684 | 6_3:-42109238 | None:intergenic |
| GGATAGATACTGCACTGACA+GGG | 0.588476 | 6_3:-42110076 | None:intergenic |
| GCTGCTGTTGTGAAGACTAC+CGG | 0.588617 | 6_3:+42110263 | Msa0951400:CDS |
| ACTAGTTTGCAGAGTAGTGA+TGG | 0.595827 | 6_3:+42110458 | Msa0951400:CDS |
| TGCAGCGATCATTCTTCCGG+TGG | 0.596464 | 6_3:+42105929 | Msa0951400:intron |
| ATACTGAACGAGTTCCAAAA+GGG | 0.596540 | 6_3:+42110227 | Msa0951400:CDS |
| AGTAGTGATGGCACATTAAG+CGG | 0.599766 | 6_3:+42110470 | Msa0951400:CDS |
| TCTTGTCTCCATTCATGGCA+TGG | 0.603983 | 6_3:+42108214 | Msa0951400:CDS |
| TGTGAGACCGGACATGACTC+CGG | 0.604884 | 6_3:-42105444 | None:intergenic |
| TTGGGAAAGATTCTTGCCCG+CGG | 0.604895 | 6_3:+42109858 | Msa0951400:CDS |
| TCTAGTGGGTATTCATATGG+TGG | 0.607994 | 6_3:-42109303 | None:intergenic |
| CTACATGATCATTGCGACCA+TGG | 0.614093 | 6_3:+42109242 | Msa0951400:CDS |
| TGGTTGAAACGATCATCTAG+TGG | 0.614262 | 6_3:-42109318 | None:intergenic |
| TTATCACAAAAGAGAACACT+AGG | 0.614891 | 6_3:+42105211 | Msa0951400:five_prime_UTR |
| CAACCATGGTAGAACTTGTG+AGG | 0.615833 | 6_3:+42109335 | Msa0951400:CDS |
| GTGAGACGGTACAGTTGACA+AGG | 0.628306 | 6_3:-42109363 | None:intergenic |
| TTCCAACCGGATAAGAAAGA+GGG | 0.628963 | 6_3:-42108017 | None:intergenic |
| TGGGTATTCATATGGTGGAA+CGG | 0.629104 | 6_3:-42109298 | None:intergenic |
| CTAGATGATCGTTTCAACCA+TGG | 0.630004 | 6_3:+42109321 | Msa0951400:CDS |
| CACCTTGCTCTCACCAACGA+AGG | 0.637959 | 6_3:+42105356 | Msa0951400:five_prime_UTR |
| CGACCATGGTAGAACTTGTG+AGG | 0.639182 | 6_3:+42109256 | Msa0951400:CDS |
| GATGAGACAACAATTATCAG+TGG | 0.641472 | 6_3:+42108383 | Msa0951400:CDS |
| TGTCTCCATTCATGGCATGG+AGG | 0.641880 | 6_3:+42108217 | Msa0951400:CDS |
| GGTTGAAACGATCATCTAGT+GGG | 0.653260 | 6_3:-42109317 | None:intergenic |
| TGGTCGCAATGATCATGTAG+CGG | 0.654696 | 6_3:-42109239 | None:intergenic |
| AGGTTCTGGATTGCGTACTG+GGG | 0.664585 | 6_3:+42108153 | Msa0951400:intron |
| GATAGATACTGCACTGACAG+GGG | 0.670187 | 6_3:-42110075 | None:intergenic |
| ATGCCTCACAAGTTCTACCA+TGG | 0.670318 | 6_3:-42109338 | None:intergenic |
| GCAACATGGATTGCTTACGC+CGG | 0.670459 | 6_3:+42105395 | Msa0951400:five_prime_UTR |
| TTTGAGAATAGACAGGAACT+CGG | 0.672689 | 6_3:-42109887 | None:intergenic |
| ATGCCTCACAAGTTCTACCA+TGG | 0.672757 | 6_3:-42109259 | None:intergenic |
| CTTCGTTGGTGAGAGCAAGG+TGG | 0.701135 | 6_3:-42105355 | None:intergenic |
| TTGCGTACTGGGGAACGACG+AGG | 0.706727 | 6_3:+42108163 | Msa0951400:CDS |
| TATCTATCCGGAGAATACCA+CGG | 0.709255 | 6_3:+42110090 | Msa0951400:CDS |
| TGGAACGGTGCTGTTCACAA+GGG | 0.726748 | 6_3:-42109283 | None:intergenic |
| TGAGACGGTACAGTTGACAA+GGG | 0.750902 | 6_3:-42109362 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATTAAAGAAACTATT+GGG | - | chr6_3:42105576-42105595 | None:intergenic | 10.0% |
| !! | TAAATAATTAAAGAAACTAT+TGG | - | chr6_3:42105577-42105596 | None:intergenic | 10.0% |
| !! | AATTATTTAGTTAATATTCA+CGG | + | chr6_3:42105730-42105749 | Msa0951400:intron | 10.0% |
| !!! | AAAAATTGATAGTATTAATA+CGG | - | chr6_3:42106955-42106974 | None:intergenic | 10.0% |
| !!! | AAAAATTGATAGTATTAATA+CGG | - | chr6_3:42106955-42106974 | None:intergenic | 10.0% |
| !!! | AAATTCCAATTTATTTTTAA+TGG | + | chr6_3:42110163-42110182 | Msa0951400:intron | 10.0% |
| !! | ATATACCATTAAAAATAAAT+TGG | - | chr6_3:42110171-42110190 | None:intergenic | 10.0% |
| !! | TAATAGTATTATATGAAACA+CGG | + | chr6_3:42105599-42105618 | Msa0951400:intron | 15.0% |
| !!! | ATATTGACCTTTTTTTTTTT+TGG | + | chr6_3:42106033-42106052 | Msa0951400:intron | 15.0% |
| !! | TTATGTACCAAAAAAAAAAA+AGG | - | chr6_3:42106043-42106062 | None:intergenic | 15.0% |
| !! | CTTATTCTCTAAATATTTAA+TGG | + | chr6_3:42106239-42106258 | Msa0951400:intron | 15.0% |
| !!! | AAAATTGATAGTATTAATAC+GGG | - | chr6_3:42106954-42106973 | None:intergenic | 15.0% |
| !!! | AAAATTGATAGTATTAATAC+GGG | - | chr6_3:42106954-42106973 | None:intergenic | 15.0% |
| !! | TTGAATACATTTATATACAA+AGG | + | chr6_3:42107507-42107526 | Msa0951400:intron | 15.0% |
| !! | TGAATACATTTATATACAAA+GGG | + | chr6_3:42107508-42107527 | Msa0951400:intron | 15.0% |
| !! | GACAAGTTATTATTATTAAT+TGG | - | chr6_3:42107895-42107914 | None:intergenic | 15.0% |
| !! | ATTAAGAAAACACAAAAATT+AGG | - | chr6_3:42108469-42108488 | None:intergenic | 15.0% |
| !!! | ATAAAAATCTTGTTTTGTAT+CGG | - | chr6_3:42109589-42109608 | None:intergenic | 15.0% |
| !! | TTTCAAATTATTTACTGTGT+CGG | + | chr6_3:42105858-42105877 | Msa0951400:intron | 20.0% |
| !!! | TATTTTCTTATAAGCTATCA+TGG | - | chr6_3:42106164-42106183 | None:intergenic | 20.0% |
| !!! | GCTCAAACAATTTTTTAAAA+AGG | + | chr6_3:42106280-42106299 | Msa0951400:intron | 20.0% |
| !!! | TGAAAAGAGTTGTTTTTTTA+GGG | - | chr6_3:42106357-42106376 | None:intergenic | 20.0% |
| !!! | TTGAAAAGAGTTGTTTTTTT+AGG | - | chr6_3:42106358-42106377 | None:intergenic | 20.0% |
| !!! | ACTTTTTGACTCAAAATTAA+GGG | - | chr6_3:42106451-42106470 | None:intergenic | 20.0% |
| !!! | TACTTTTTGACTCAAAATTA+AGG | - | chr6_3:42106452-42106471 | None:intergenic | 20.0% |
| !!! | TTTTTTCAAATATACTCTGT+TGG | + | chr6_3:42106510-42106529 | Msa0951400:intron | 20.0% |
| !!! | AAATTGATAGTATTAATACG+GGG | - | chr6_3:42106953-42106972 | None:intergenic | 20.0% |
| !!! | TCAATTGATAGTATTAATAC+GGG | - | chr6_3:42106986-42107005 | None:intergenic | 20.0% |
| !!! | CTCAATTGATAGTATTAATA+CGG | - | chr6_3:42106987-42107006 | None:intergenic | 20.0% |
| !!! | AAATTGATAGTATTAATACG+GGG | - | chr6_3:42106953-42106972 | None:intergenic | 20.0% |
| !!! | TCAATTGATAGTATTAATAC+GGG | - | chr6_3:42106986-42107005 | None:intergenic | 20.0% |
| !!! | CTCAATTGATAGTATTAATA+CGG | - | chr6_3:42106987-42107006 | None:intergenic | 20.0% |
| !!! | TCAATTGATAGTATTAATAC+GGG | - | chr6_3:42106986-42107005 | None:intergenic | 20.0% |
| !!! | GTCAATTGATAGTATTAATA+CGG | - | chr6_3:42107466-42107485 | None:intergenic | 20.0% |
| !! | TGTAAATGTTCTGATAAAAA+GGG | + | chr6_3:42107593-42107612 | Msa0951400:intron | 20.0% |
| !! | AAAACATAGAAATTACTAGA+TGG | - | chr6_3:42108836-42108855 | None:intergenic | 20.0% |
| !!! | AAAGAAAATGTTGATTCAAT+AGG | - | chr6_3:42108894-42108913 | None:intergenic | 20.0% |
| !! | TTTAGATGTTAATTCAAAGT+TGG | + | chr6_3:42108911-42108930 | Msa0951400:CDS | 20.0% |
| !! | AAAAGAAATTGTCTATAAAG+AGG | - | chr6_3:42109658-42109677 | None:intergenic | 20.0% |
| !! | TTGCATATATCTTATATGTA+GGG | - | chr6_3:42109749-42109768 | None:intergenic | 20.0% |
| !! | TTTGCATATATCTTATATGT+AGG | - | chr6_3:42109750-42109769 | None:intergenic | 20.0% |
| !!! | TTTTCAGGAAAATAAAATAG+TGG | - | chr6_3:42109805-42109824 | None:intergenic | 20.0% |
| !!! | TTTTAATGGTATATATTTGC+AGG | + | chr6_3:42110177-42110196 | Msa0951400:intron | 20.0% |
| !! | TTTAATGGTATATATTTGCA+GGG | + | chr6_3:42110178-42110197 | Msa0951400:intron | 20.0% |
| !! | TGATTTTATAATCATCACCT+TGG | + | chr6_3:42105238-42105257 | Msa0951400:five_prime_UTR | 25.0% |
| ! | TATTGAAATATCTATCTGTC+TGG | - | chr6_3:42105277-42105296 | None:intergenic | 25.0% |
| ! | AATAGTCAACGCATTAAAAA+TGG | - | chr6_3:42105327-42105346 | None:intergenic | 25.0% |
| !!! | AAATTTATGAAGCACTGATA+CGG | - | chr6_3:42105902-42105921 | None:intergenic | 25.0% |
| ! | AAAAGCTTTCAAACAAACAA+AGG | - | chr6_3:42106118-42106137 | None:intergenic | 25.0% |
| !! | AAAAGGCTTAATTACACTTT+TGG | + | chr6_3:42106297-42106316 | Msa0951400:intron | 25.0% |
| !!! | GAAAAGAGTTGTTTTTTTAG+GGG | - | chr6_3:42106356-42106375 | None:intergenic | 25.0% |
| !!! | CTTTTTGACTCAAAATTAAG+GGG | - | chr6_3:42106450-42106469 | None:intergenic | 25.0% |
| ! | TTGAGTCAAAAAGTAAACTT+AGG | + | chr6_3:42106457-42106476 | Msa0951400:intron | 25.0% |
| ! | TGAGTCAAAAAGTAAACTTA+GGG | + | chr6_3:42106458-42106477 | Msa0951400:intron | 25.0% |
| !! | CAATTGATAGTATTAATACG+GGG | - | chr6_3:42106985-42107004 | None:intergenic | 25.0% |
| !! | AATTGATAGTATTAATACGG+GGG | - | chr6_3:42106952-42106971 | None:intergenic | 25.0% |
| !! | CAATTGATAGTATTAATACG+GGG | - | chr6_3:42106985-42107004 | None:intergenic | 25.0% |
| !! | CAATTGATAGTATTAATACG+GGG | - | chr6_3:42106985-42107004 | None:intergenic | 25.0% |
| !! | CTTTTTATCAGAACATTTAC+AGG | - | chr6_3:42107594-42107613 | None:intergenic | 25.0% |
| ! | CTGTAAATGTTCTGATAAAA+AGG | + | chr6_3:42107592-42107611 | Msa0951400:intron | 25.0% |
| !!! | GTTACTTTCGTTCTTTTTTT+TGG | + | chr6_3:42107783-42107802 | Msa0951400:CDS | 25.0% |
| ! | AGAACTTCATAAAATTGCTT+AGG | - | chr6_3:42107868-42107887 | None:intergenic | 25.0% |
| !!! | ATTTAACCTGCTTGTTTTTT+AGG | + | chr6_3:42108334-42108353 | Msa0951400:intron | 25.0% |
| ! | TTTAACTAGTGTCTTCTATT+TGG | + | chr6_3:42108562-42108581 | Msa0951400:intron | 25.0% |
| ! | TTAACTAGTGTCTTCTATTT+GGG | + | chr6_3:42108563-42108582 | Msa0951400:intron | 25.0% |
| ! | ATGCTCTTTATACAAACATA+TGG | - | chr6_3:42108789-42108808 | None:intergenic | 25.0% |
| !! | TTGTTATTCTTCAGTATGTT+AGG | + | chr6_3:42108960-42108979 | Msa0951400:intron | 25.0% |
| ! | GTCTAAAAAATTCAAACATC+CGG | + | chr6_3:42109445-42109464 | Msa0951400:intron | 25.0% |
| ! | TCTAAAAAATTCAAACATCC+GGG | + | chr6_3:42109446-42109465 | Msa0951400:intron | 25.0% |
| !! | TTTTCCAATAGTCTAGTAAT+TGG | - | chr6_3:42109689-42109708 | None:intergenic | 25.0% |
| ! | TGCATATATCTTATATGTAG+GGG | - | chr6_3:42109748-42109767 | None:intergenic | 25.0% |
| ! | AAAATCCCAGGAATATTATT+GGG | + | chr6_3:42109907-42109926 | Msa0951400:CDS | 25.0% |
| !! | TACATTATCTCAATCCTTTT+AGG | + | chr6_3:42109969-42109988 | Msa0951400:intron | 25.0% |
| ! | AAATTTATAAAAACACACCG+TGG | - | chr6_3:42110110-42110129 | None:intergenic | 25.0% |
| ! | TTATAAATTTATTCTCGTCG+CGG | + | chr6_3:42110120-42110139 | Msa0951400:intron | 25.0% |
| ! | TTTGATGCAAAGAAAAATGT+TGG | + | chr6_3:42110326-42110345 | Msa0951400:CDS | 25.0% |
| TTATCACAAAAGAGAACACT+AGG | + | chr6_3:42105211-42105230 | Msa0951400:five_prime_UTR | 30.0% | |
| AAATATCTATCTGTCTGGTT+CGG | - | chr6_3:42105272-42105291 | None:intergenic | 30.0% | |
| AACAAGAAAACAGCATATTC+CGG | - | chr6_3:42105417-42105436 | None:intergenic | 30.0% | |
| AAAGAAACTATTGGGTTAAG+AGG | - | chr6_3:42105568-42105587 | None:intergenic | 30.0% | |
| ! | TCACAACTTTGGAAAACTTA+GGG | - | chr6_3:42106325-42106344 | None:intergenic | 30.0% |
| ! | ATCACAACTTTGGAAAACTT+AGG | - | chr6_3:42106326-42106345 | None:intergenic | 30.0% |
| ! | GTTTTCCAAAGTTGTGATTT+TGG | + | chr6_3:42106328-42106347 | Msa0951400:intron | 30.0% |
| TGCAACAGAAAGTAAACTTA+GGG | - | chr6_3:42106384-42106403 | None:intergenic | 30.0% | |
| TTGCAACAGAAAGTAAACTT+AGG | - | chr6_3:42106385-42106404 | None:intergenic | 30.0% | |
| GAAAGTAAACTTAGGGAAAT+TGG | - | chr6_3:42106423-42106442 | None:intergenic | 30.0% | |
| GAGTCAAAAAGTAAACTTAG+GGG | + | chr6_3:42106459-42106478 | Msa0951400:intron | 30.0% | |
| AGTCAAAAAGTAAACTTAGG+GGG | + | chr6_3:42106460-42106479 | Msa0951400:intron | 30.0% | |
| CTTGAGAAGAGTTTATAAAG+AGG | + | chr6_3:42106669-42106688 | Msa0951400:intron | 30.0% | |
| TTAAGCACCAAATTTCAACA+TGG | + | chr6_3:42106732-42106751 | Msa0951400:intron | 30.0% | |
| TCTGATACCATGTTGAAATT+TGG | - | chr6_3:42106742-42106761 | None:intergenic | 30.0% | |
| TATCCTAGATCTATCATCAA+TGG | + | chr6_3:42106765-42106784 | Msa0951400:intron | 30.0% | |
| ATCCTAGATCTATCATCAAT+GGG | + | chr6_3:42106766-42106785 | Msa0951400:intron | 30.0% | |
| CAGGTATTAAGAAAAGTTGT+TGG | - | chr6_3:42107575-42107594 | None:intergenic | 30.0% | |
| AATGTTCTGATAAAAAGGGA+CGG | + | chr6_3:42107597-42107616 | Msa0951400:intron | 30.0% | |
| ATTGTACATTTGAAAGCCAA+TGG | - | chr6_3:42107700-42107719 | None:intergenic | 30.0% | |
| CTTTCAAATGTACAATATGC+AGG | + | chr6_3:42107704-42107723 | Msa0951400:exon | 30.0% | |
| AAGAGTTTATCTAGGTATAG+AGG | - | chr6_3:42107735-42107754 | None:intergenic | 30.0% | |
| CTTGATTGAAGAGTTTATCT+AGG | - | chr6_3:42107743-42107762 | None:intergenic | 30.0% | |
| !!! | TTTCGTTCTTTTTTTTGGTG+AGG | + | chr6_3:42107788-42107807 | Msa0951400:CDS | 30.0% |
| ! | TAACTTGTCTTTCTAATTGC+AGG | + | chr6_3:42107906-42107925 | Msa0951400:intron | 30.0% |
| TATCTACTACAAATTGCTTG+TGG | - | chr6_3:42107937-42107956 | None:intergenic | 30.0% | |
| CAAGCAATTTGTAGTAGATA+TGG | + | chr6_3:42107937-42107956 | Msa0951400:CDS | 30.0% | |
| GAAACAAATATTCGTTGGAT+AGG | - | chr6_3:42108133-42108152 | None:intergenic | 30.0% | |
| ATCCAACGAATATTTGTTTC+AGG | + | chr6_3:42108133-42108152 | Msa0951400:intron | 30.0% | |
| AACCTGAAACAAATATTCGT+TGG | - | chr6_3:42108138-42108157 | None:intergenic | 30.0% | |
| !! | AAAATAAGTCTTGTCGACTT+TGG | + | chr6_3:42108267-42108286 | Msa0951400:intron | 30.0% |
| TAAGAAACTTCATATTCTGC+TGG | - | chr6_3:42108530-42108549 | None:intergenic | 30.0% | |
| ATGATGTTGGAAATGGAATA+AGG | + | chr6_3:42108603-42108622 | Msa0951400:intron | 30.0% | |
| TGATGTTGGAAATGGAATAA+GGG | + | chr6_3:42108604-42108623 | Msa0951400:intron | 30.0% | |
| ATATTTATCAATGTGCCATG+CGG | + | chr6_3:42108643-42108662 | Msa0951400:intron | 30.0% | |
| ATGTTAATTCAAAGTTGGAC+TGG | + | chr6_3:42108916-42108935 | Msa0951400:CDS | 30.0% | |
| !!! | TTGAATTTTTTAGACGTGTG+AGG | - | chr6_3:42109440-42109459 | None:intergenic | 30.0% |
| CTAAAAAATTCAAACATCCG+GGG | + | chr6_3:42109447-42109466 | Msa0951400:intron | 30.0% | |
| TAAAGAGTGATGACTTTGTA+GGG | - | chr6_3:42109512-42109531 | None:intergenic | 30.0% | |
| AGAGGAAGAAAATGAAATCT+TGG | - | chr6_3:42109640-42109659 | None:intergenic | 30.0% | |
| AACACCAATTACTAGACTAT+TGG | + | chr6_3:42109682-42109701 | Msa0951400:intron | 30.0% | |
| ATATATCTTATATGTAGGGG+TGG | - | chr6_3:42109745-42109764 | None:intergenic | 30.0% | |
| ATATATGCAAAACATATGCG+TGG | + | chr6_3:42109759-42109778 | Msa0951400:intron | 30.0% | |
| CAAAATCCCAGGAATATTAT+TGG | + | chr6_3:42109906-42109925 | Msa0951400:CDS | 30.0% | |
| AAAAGCCCAATAATATTCCT+GGG | - | chr6_3:42109915-42109934 | None:intergenic | 30.0% | |
| TAAAAGCCCAATAATATTCC+TGG | - | chr6_3:42109916-42109935 | None:intergenic | 30.0% | |
| TGACGAAAAAAGAACCTAAA+AGG | - | chr6_3:42109986-42110005 | None:intergenic | 30.0% | |
| !! | GGAATTTTTCACAGTTTGTT+TGG | - | chr6_3:42110150-42110169 | None:intergenic | 30.0% |
| TTCTCTTCATCAATTAGTTG+CGG | - | chr6_3:42110305-42110324 | None:intergenic | 30.0% | |
| ATGCAAAGAAAAATGTTGGT+GGG | + | chr6_3:42110330-42110349 | Msa0951400:CDS | 30.0% | |
| ! | CCATGAATATTTTCGTAAGA+AGG | - | chr6_3:42110497-42110516 | None:intergenic | 30.0% |
| CCTTCTTACGAAAATATTCA+TGG | + | chr6_3:42110494-42110513 | Msa0951400:CDS | 30.0% | |
| AATATTCATGGTGAAGTGAT+TGG | + | chr6_3:42110506-42110525 | Msa0951400:CDS | 30.0% | |
| AGTGATTGGTATTATCACTT+TGG | + | chr6_3:42110520-42110539 | Msa0951400:CDS | 30.0% | |
| ! | AATATCTATCTGTCTGGTTC+GGG | - | chr6_3:42105271-42105290 | None:intergenic | 35.0% |
| AGAAAAACACGTATGACGTA+TGG | + | chr6_3:42105299-42105318 | Msa0951400:five_prime_UTR | 35.0% | |
| ! | TGTTTTCTTGTTCTCTTTGC+CGG | + | chr6_3:42105425-42105444 | Msa0951400:five_prime_UTR | 35.0% |
| CACTACGTTCAAGAATTTCA+AGG | - | chr6_3:42105499-42105518 | None:intergenic | 35.0% | |
| CTTGAAATTCTTGAACGTAG+TGG | + | chr6_3:42105497-42105516 | Msa0951400:five_prime_UTR | 35.0% | |
| CAGTGTAATTACAAGTGTGT+CGG | - | chr6_3:42105665-42105684 | None:intergenic | 35.0% | |
| !! | TCTCTGTAATGCTGTTTCTA+TGG | + | chr6_3:42105986-42106005 | Msa0951400:five_prime_UTR | 35.0% |
| ! | ACAACTTTGGAAAACTTAGG+GGG | - | chr6_3:42106323-42106342 | None:intergenic | 35.0% |
| ! | CACAACTTTGGAAAACTTAG+GGG | - | chr6_3:42106324-42106343 | None:intergenic | 35.0% |
| CAACAGAAAGTAAACTTAGG+GGG | - | chr6_3:42106382-42106401 | None:intergenic | 35.0% | |
| GCAACAGAAAGTAAACTTAG+GGG | - | chr6_3:42106383-42106402 | None:intergenic | 35.0% | |
| TTTCCCTAAGTTTACTTTCC+AGG | + | chr6_3:42106424-42106443 | Msa0951400:intron | 35.0% | |
| AAACTTAGGGGGCTAAATTT+AGG | + | chr6_3:42106471-42106490 | Msa0951400:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr6_3:42106912-42106931 | None:intergenic | 35.0% | |
| ATACGGGGTATGTTGAAATT+TGG | - | chr6_3:42106938-42106957 | None:intergenic | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr6_3:42106912-42106931 | None:intergenic | 35.0% | |
| ATACGGGGTATGTTGAAATT+TGG | - | chr6_3:42106938-42106957 | None:intergenic | 35.0% | |
| AGCCCAGCATAGTATTAATA+CGG | - | chr6_3:42107079-42107098 | None:intergenic | 35.0% | |
| TAATACGGGGTATGTTGAAA+CGG | - | chr6_3:42106940-42106959 | None:intergenic | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr6_3:42106912-42106931 | None:intergenic | 35.0% | |
| ATACGGGGTATGTTGAAATT+TGG | - | chr6_3:42106938-42106957 | None:intergenic | 35.0% | |
| AGCCCAGCATAGTATTAATA+CGG | - | chr6_3:42107079-42107098 | None:intergenic | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr6_3:42106912-42106931 | None:intergenic | 35.0% | |
| ATACGGGGTATGTTGAAATT+TGG | - | chr6_3:42106938-42106957 | None:intergenic | 35.0% | |
| ATGTTACCCTCTTTCTTATC+CGG | + | chr6_3:42108011-42108030 | Msa0951400:CDS | 35.0% | |
| GTAGAATTTACCTTTCCAAC+CGG | - | chr6_3:42108033-42108052 | None:intergenic | 35.0% | |
| ATAGTACAGATGTTGTTCCA+TGG | + | chr6_3:42108056-42108075 | Msa0951400:intron | 35.0% | |
| CTATTCTCGTATATAGACGA+TGG | + | chr6_3:42108092-42108111 | Msa0951400:intron | 35.0% | |
| ! | TTCGTTGGATAGGTAGTTTT+CGG | - | chr6_3:42108123-42108142 | None:intergenic | 35.0% |
| !! | CGAATATTTGTTTCAGGTTC+TGG | + | chr6_3:42108139-42108158 | Msa0951400:intron | 35.0% |
| !!! | TTGTTTTTTAGGCTGGGAAA+GGG | + | chr6_3:42108345-42108364 | Msa0951400:intron | 35.0% |
| GATGAGACAACAATTATCAG+TGG | + | chr6_3:42108383-42108402 | Msa0951400:CDS | 35.0% | |
| ! | AATTGCAGCACTTACCTTTT+CGG | - | chr6_3:42108423-42108442 | None:intergenic | 35.0% |
| GGTTCACAATTGATTGTGAA+AGG | - | chr6_3:42108448-42108467 | None:intergenic | 35.0% | |
| CACTAGTTAAAACTCAAGAC+AGG | - | chr6_3:42108553-42108572 | None:intergenic | 35.0% | |
| AGCATCAATGATGTTGGAAA+TGG | + | chr6_3:42108596-42108615 | Msa0951400:intron | 35.0% | |
| ATACATTCTCGTGCATACTT+GGG | + | chr6_3:42108718-42108737 | Msa0951400:intron | 35.0% | |
| CTTCCAACAAATGACTGAAT+TGG | + | chr6_3:42108983-42109002 | Msa0951400:intron | 35.0% | |
| ! | TCATCTAGTGGGTATTCATA+TGG | - | chr6_3:42109309-42109328 | None:intergenic | 35.0% |
| AAAGAGTGATGACTTTGTAG+GGG | - | chr6_3:42109511-42109530 | None:intergenic | 35.0% | |
| GTAAAGAGTGATGACTTTGT+AGG | - | chr6_3:42109513-42109532 | None:intergenic | 35.0% | |
| TTTACCAAGAGCAATGACTT+GGG | + | chr6_3:42109528-42109547 | Msa0951400:intron | 35.0% | |
| ! | TAGGCAGGATAAAAGTTTTC+AGG | - | chr6_3:42109820-42109839 | None:intergenic | 35.0% |
| TTTGAGAATAGACAGGAACT+CGG | - | chr6_3:42109890-42109909 | None:intergenic | 35.0% | |
| TCGTTCAGTATATCGTATAG+AGG | - | chr6_3:42110218-42110237 | None:intergenic | 35.0% | |
| TATACTGAACGAGTTCCAAA+AGG | + | chr6_3:42110226-42110245 | Msa0951400:CDS | 35.0% | |
| ATACTGAACGAGTTCCAAAA+GGG | + | chr6_3:42110227-42110246 | Msa0951400:CDS | 35.0% | |
| ! | CCATATGACTATTTCCCTTT+TGG | - | chr6_3:42110244-42110263 | None:intergenic | 35.0% |
| CCAAAAGGGAAATAGTCATA+TGG | + | chr6_3:42110241-42110260 | Msa0951400:CDS | 35.0% | |
| GATGCAAAGAAAAATGTTGG+TGG | + | chr6_3:42110329-42110348 | Msa0951400:CDS | 35.0% | |
| TGCAAAGAAAAATGTTGGTG+GGG | + | chr6_3:42110331-42110350 | Msa0951400:CDS | 35.0% | |
| ! | TTATTGCCAGTAAGCTTTGA+AGG | - | chr6_3:42110431-42110450 | None:intergenic | 35.0% |
| AGTTGAAAAGTGGGAAAGGA+AGG | + | chr6_3:42105181-42105200 | Msa0951400:five_prime_UTR | 40.0% | |
| ! | TACCTTTTGGATCTGCAACA+TGG | + | chr6_3:42105381-42105400 | Msa0951400:five_prime_UTR | 40.0% |
| ATCCATGTTGCAGATCCAAA+AGG | - | chr6_3:42105386-42105405 | None:intergenic | 40.0% | |
| !!! | CCAGCTTGTTTTTTCTGAGA+AGG | - | chr6_3:42105527-42105546 | None:intergenic | 40.0% |
| CCTTCTCAGAAAAAACAAGC+TGG | + | chr6_3:42105524-42105543 | Msa0951400:five_prime_UTR | 40.0% | |
| ACTATTGGGTTAAGAGGAAG+AGG | - | chr6_3:42105562-42105581 | None:intergenic | 40.0% | |
| TAATATTCACGGACAGTCCT+CGG | + | chr6_3:42105741-42105760 | Msa0951400:intron | 40.0% | |
| GTAATTACAAGTGTCCGTGT+TGG | - | chr6_3:42105796-42105815 | None:intergenic | 40.0% | |
| TTATGCAGCGATCATTCTTC+CGG | + | chr6_3:42105926-42105945 | Msa0951400:intron | 40.0% | |
| !!! | TGGTGTTGCTTTTTAACCAC+CGG | - | chr6_3:42105948-42105967 | None:intergenic | 40.0% |
| !! | CTGTAATGCTGTTTCTATGG+AGG | + | chr6_3:42105989-42106008 | Msa0951400:five_prime_UTR | 40.0% |
| ACTTAGGGAAATTGGCATGA+GGG | - | chr6_3:42106415-42106434 | None:intergenic | 40.0% | |
| AACTTAGGGAAATTGGCATG+AGG | - | chr6_3:42106416-42106435 | None:intergenic | 40.0% | |
| TGGAAATTCCGCCTTAATTG+TGG | + | chr6_3:42106530-42106549 | Msa0951400:intron | 40.0% | |
| CAAACCAAAGGTCGCAATTT+AGG | - | chr6_3:42106570-42106589 | None:intergenic | 40.0% | |
| !! | CTTCATTGTGTTGGCTTTGA+GGG | + | chr6_3:42106612-42106631 | Msa0951400:intron | 40.0% |
| !! | TTCATTGTGTTGGCTTTGAG+GGG | + | chr6_3:42106613-42106632 | Msa0951400:intron | 40.0% |
| CCTTACAAAACCAGCTTGTA+AGG | - | chr6_3:42106707-42106726 | None:intergenic | 40.0% | |
| !!! | CCTTACAAGCTGGTTTTGTA+AGG | + | chr6_3:42106704-42106723 | Msa0951400:intron | 40.0% |
| ! | AGCCCATTGATGATAGATCT+AGG | - | chr6_3:42106771-42106790 | None:intergenic | 40.0% |
| TGAGGCAATTAAGGTGACTA+GGG | - | chr6_3:42106880-42106899 | None:intergenic | 40.0% | |
| CTTGTAAGGTGAGGCAATTA+AGG | - | chr6_3:42106889-42106908 | None:intergenic | 40.0% | |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr6_3:42106910-42106929 | Msa0951400:intron | 40.0% |
| CTTGTAAGGTGAGGCAATTA+AGG | - | chr6_3:42106889-42106908 | None:intergenic | 40.0% | |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr6_3:42106910-42106929 | Msa0951400:intron | 40.0% |
| ACCCCGTATTAATACTATGC+TGG | + | chr6_3:42107073-42107092 | Msa0951400:intron | 40.0% | |
| CCCAGCATAGTATTAATACG+GGG | - | chr6_3:42107077-42107096 | None:intergenic | 40.0% | |
| CCCCGTATTAATACTATGCT+GGG | + | chr6_3:42107074-42107093 | Msa0951400:intron | 40.0% | |
| GCCCAGCATAGTATTAATAC+GGG | - | chr6_3:42107078-42107097 | None:intergenic | 40.0% | |
| TGAGGCAATTAAGGTGACTA+GGG | - | chr6_3:42106880-42106899 | None:intergenic | 40.0% | |
| CTTGTAAGGTGAGGCAATTA+AGG | - | chr6_3:42106889-42106908 | None:intergenic | 40.0% | |
| GTATGTTGAAACGGCTTGTA+AGG | - | chr6_3:42107172-42107191 | None:intergenic | 40.0% | |
| CTTGTAAGGTGAGGCAATTA+AGG | - | chr6_3:42106889-42106908 | None:intergenic | 40.0% | |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr6_3:42106910-42106929 | Msa0951400:intron | 40.0% |
| ACCCCGTATTAATACTATGC+TGG | + | chr6_3:42107073-42107092 | Msa0951400:intron | 40.0% | |
| CCCAGCATAGTATTAATACG+GGG | - | chr6_3:42107077-42107096 | None:intergenic | 40.0% | |
| CCCCGTATTAATACTATGCT+GGG | + | chr6_3:42107074-42107093 | Msa0951400:intron | 40.0% | |
| GCCCAGCATAGTATTAATAC+GGG | - | chr6_3:42107078-42107097 | None:intergenic | 40.0% | |
| TGAGGCAATTAAGGTGACTA+GGG | - | chr6_3:42106880-42106899 | None:intergenic | 40.0% | |
| CTTGTAAGGTGAGGCAATTA+AGG | - | chr6_3:42106889-42106908 | None:intergenic | 40.0% | |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr6_3:42106910-42106929 | Msa0951400:intron | 40.0% |
| TTCTGATAAAAAGGGACGGT+GGG | + | chr6_3:42107601-42107620 | Msa0951400:intron | 40.0% | |
| CAAAGAGTTAGGCAGGTTTA+GGG | - | chr6_3:42107673-42107692 | None:intergenic | 40.0% | |
| TCAAAGAGTTAGGCAGGTTT+AGG | - | chr6_3:42107674-42107693 | None:intergenic | 40.0% | |
| TTCCAACCGGATAAGAAAGA+GGG | - | chr6_3:42108020-42108039 | None:intergenic | 40.0% | |
| TTTCCAACCGGATAAGAAAG+AGG | - | chr6_3:42108021-42108040 | None:intergenic | 40.0% | |
| TCTTTCTTATCCGGTTGGAA+AGG | + | chr6_3:42108020-42108039 | Msa0951400:CDS | 40.0% | |
| AAAGCTCTTGTCTCCATTCA+TGG | + | chr6_3:42108209-42108228 | Msa0951400:CDS | 40.0% | |
| TTATACCTCCATGCCATGAA+TGG | - | chr6_3:42108225-42108244 | None:intergenic | 40.0% | |
| !!! | AACCTGCTTGTTTTTTAGGC+TGG | + | chr6_3:42108338-42108357 | Msa0951400:intron | 40.0% |
| !!! | ACCTGCTTGTTTTTTAGGCT+GGG | + | chr6_3:42108339-42108358 | Msa0951400:intron | 40.0% |
| !!! | CTTGTTTTTTAGGCTGGGAA+AGG | + | chr6_3:42108344-42108363 | Msa0951400:intron | 40.0% |
| !!! | TGTTTTTTAGGCTGGGAAAG+GGG | + | chr6_3:42108346-42108365 | Msa0951400:intron | 40.0% |
| ! | AGCACTTGATTTGACCGAAA+AGG | + | chr6_3:42108406-42108425 | Msa0951400:CDS | 40.0% |
| TGGAAATGGAATAAGGGAAC+TGG | + | chr6_3:42108610-42108629 | Msa0951400:intron | 40.0% | |
| !!! | AGTTTTGGAATAACACCGCA+TGG | - | chr6_3:42108661-42108680 | None:intergenic | 40.0% |
| ACATGATCACTGGAAGTGAA+CGG | - | chr6_3:42108686-42108705 | None:intergenic | 40.0% | |
| GCACGAGAATGTATGACTAA+CGG | - | chr6_3:42108712-42108731 | None:intergenic | 40.0% | |
| CATACATTCTCGTGCATACT+TGG | + | chr6_3:42108717-42108736 | Msa0951400:intron | 40.0% | |
| ! | CTTGGGTTCTCTCTATGTTT+TGG | + | chr6_3:42108735-42108754 | Msa0951400:intron | 40.0% |
| !! | TGTTTTTGAACAGACTGCTG+AGG | + | chr6_3:42108857-42108876 | Msa0951400:intron | 40.0% |
| GAGCCAATTCAGTCATTTGT+TGG | - | chr6_3:42108989-42109008 | None:intergenic | 40.0% | |
| CGTCCATGATAGAATTTGTG+CGG | + | chr6_3:42109019-42109038 | Msa0951400:intron | 40.0% | |
| ATGCCGCACAAATTCTATCA+TGG | - | chr6_3:42109025-42109044 | None:intergenic | 40.0% | |
| CGATCATGGTAGAATTTGTG+CGG | + | chr6_3:42109098-42109117 | Msa0951400:intron | 40.0% | |
| ! | TGGGTATTCATATGGTGGAA+CGG | - | chr6_3:42109301-42109320 | None:intergenic | 40.0% |
| ! | TCTAGTGGGTATTCATATGG+TGG | - | chr6_3:42109306-42109325 | None:intergenic | 40.0% |
| GGTTGAAACGATCATCTAGT+GGG | - | chr6_3:42109320-42109339 | None:intergenic | 40.0% | |
| TGGTTGAAACGATCATCTAG+TGG | - | chr6_3:42109321-42109340 | None:intergenic | 40.0% | |
| CTAGATGATCGTTTCAACCA+TGG | + | chr6_3:42109321-42109340 | Msa0951400:CDS | 40.0% | |
| GAACATGCTCAATCTATCAC+AGG | + | chr6_3:42109389-42109408 | Msa0951400:intron | 40.0% | |
| CTTTACCAAGAGCAATGACT+TGG | + | chr6_3:42109527-42109546 | Msa0951400:intron | 40.0% | |
| TTACCAAGAGCAATGACTTG+GGG | + | chr6_3:42109529-42109548 | Msa0951400:intron | 40.0% | |
| TGGACCGAGCAAATCATTTA+GGG | + | chr6_3:42109563-42109582 | Msa0951400:intron | 40.0% | |
| ! | GTTGTTTCCCTCAAACTAGT+AGG | + | chr6_3:42109717-42109736 | Msa0951400:intron | 40.0% |
| TATCCTGCCTATCTCAAATC+AGG | + | chr6_3:42109829-42109848 | Msa0951400:intron | 40.0% | |
| ATCCTGCCTATCTCAAATCA+GGG | + | chr6_3:42109830-42109849 | Msa0951400:intron | 40.0% | |
| !! | CTGGGATTTTGAGAATAGAC+AGG | - | chr6_3:42109897-42109916 | None:intergenic | 40.0% |
| CTGTCTATTCTCAAAATCCC+AGG | + | chr6_3:42109895-42109914 | Msa0951400:CDS | 40.0% | |
| TATCTATCCGGAGAATACCA+CGG | + | chr6_3:42110090-42110109 | Msa0951400:CDS | 40.0% | |
| ! | TCGTATAGAGGCATATCAGA+TGG | - | chr6_3:42110206-42110225 | None:intergenic | 40.0% |
| TACTCCATTGCTACAAGAAC+TGG | + | chr6_3:42110367-42110386 | Msa0951400:CDS | 40.0% | |
| GAATCCAGTTCTTGTAGCAA+TGG | - | chr6_3:42110374-42110393 | None:intergenic | 40.0% | |
| ! | ACTAGTTTGCAGAGTAGTGA+TGG | + | chr6_3:42110458-42110477 | Msa0951400:CDS | 40.0% |
| AGTAGTGATGGCACATTAAG+CGG | + | chr6_3:42110470-42110489 | Msa0951400:CDS | 40.0% | |
| TTTAGATATGTGCATGCCCT+TGG | + | chr6_3:42110584-42110603 | Msa0951400:CDS | 40.0% | |
| !! | ACCAACGAAGGCATACCTTT+TGG | + | chr6_3:42105368-42105387 | Msa0951400:five_prime_UTR | 45.0% |
| ! | TCCAAAAGGTATGCCTTCGT+TGG | - | chr6_3:42105372-42105391 | None:intergenic | 45.0% |
| TATGAAACACGGACACTCCT+CGG | + | chr6_3:42105610-42105629 | Msa0951400:intron | 45.0% | |
| GAAGCAGAGTAACAAGAAGC+TGG | - | chr6_3:42105968-42105987 | None:intergenic | 45.0% | |
| GGGAGCCAAAATCACAACTT+TGG | - | chr6_3:42106336-42106355 | None:intergenic | 45.0% | |
| CTTAGGGAAATTGGCATGAG+GGG | - | chr6_3:42106414-42106433 | None:intergenic | 45.0% | |
| GGGCCTGGAAAGTAAACTTA+GGG | - | chr6_3:42106430-42106449 | None:intergenic | 45.0% | |
| TGACTCAAAATTAAGGGGCC+TGG | - | chr6_3:42106445-42106464 | None:intergenic | 45.0% | |
| CTAGGGGAGAACCACAATTA+AGG | - | chr6_3:42106544-42106563 | None:intergenic | 45.0% | |
| CTGCAATGATGGCAAACCAA+AGG | - | chr6_3:42106582-42106601 | None:intergenic | 45.0% | |
| !! | CAACACAATGAAGGTGTTGG+AGG | - | chr6_3:42106605-42106624 | None:intergenic | 45.0% |
| CTCCAACACCTTCATTGTGT+TGG | + | chr6_3:42106603-42106622 | Msa0951400:intron | 45.0% | |
| ! | AGCCAACACAATGAAGGTGT+TGG | - | chr6_3:42106608-42106627 | None:intergenic | 45.0% |
| CCTCAAAGCCAACACAATGA+AGG | - | chr6_3:42106614-42106633 | None:intergenic | 45.0% | |
| !! | CCTTCATTGTGTTGGCTTTG+AGG | + | chr6_3:42106611-42106630 | Msa0951400:intron | 45.0% |
| !! | TCATTGTGTTGGCTTTGAGG+GGG | + | chr6_3:42106614-42106633 | Msa0951400:intron | 45.0% |
| TAGTCCCACATCGGATAGTT+AGG | + | chr6_3:42106643-42106662 | Msa0951400:intron | 45.0% | |
| GAGTCCTAACTATCCGATGT+GGG | - | chr6_3:42106650-42106669 | None:intergenic | 45.0% | |
| AGAGTCCTAACTATCCGATG+TGG | - | chr6_3:42106651-42106670 | None:intergenic | 45.0% | |
| CAAAACCAGCTTGTAAGGTG+AGG | - | chr6_3:42106702-42106721 | None:intergenic | 45.0% | |
| GGGAAATTCCGCCTTAATTG+TGG | + | chr6_3:42106849-42106868 | Msa0951400:intron | 45.0% | |
| CTAGGGAAGGACCACAATTA+AGG | - | chr6_3:42106863-42106882 | None:intergenic | 45.0% | |
| GCAATTAAGGTGACTAGGGA+AGG | - | chr6_3:42106876-42106895 | None:intergenic | 45.0% | |
| GTGAGGCAATTAAGGTGACT+AGG | - | chr6_3:42106881-42106900 | None:intergenic | 45.0% | |
| AATTGCCTCACCTTACAAGC+CGG | + | chr6_3:42106890-42106909 | Msa0951400:intron | 45.0% | |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr6_3:42106903-42106922 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr6_3:42106900-42106919 | Msa0951400:intron | 45.0% |
| AATTGCCTCACCTTACAAGC+CGG | + | chr6_3:42106890-42106909 | Msa0951400:intron | 45.0% | |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr6_3:42106903-42106922 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr6_3:42106900-42106919 | Msa0951400:intron | 45.0% |
| GGGAAATTCCGCCTTAATTG+TGG | + | chr6_3:42106849-42106868 | Msa0951400:intron | 45.0% | |
| CTAGGGAAGGACCACAATTA+AGG | - | chr6_3:42106863-42106882 | None:intergenic | 45.0% | |
| GCAATTAAGGTGACTAGGGA+AGG | - | chr6_3:42106876-42106895 | None:intergenic | 45.0% | |
| GTGAGGCAATTAAGGTGACT+AGG | - | chr6_3:42106881-42106900 | None:intergenic | 45.0% | |
| TTGAAACGGCTTGTAAGGTG+AGG | - | chr6_3:42107167-42107186 | None:intergenic | 45.0% | |
| AATTGCCTCACCTTACAAGC+CGG | + | chr6_3:42106890-42106909 | Msa0951400:intron | 45.0% | |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr6_3:42106903-42106922 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr6_3:42106900-42106919 | Msa0951400:intron | 45.0% |
| GGGAAATTCCGCCTTAATTG+TGG | + | chr6_3:42106849-42106868 | Msa0951400:intron | 45.0% | |
| CTAGGGAAGGACCACAATTA+AGG | - | chr6_3:42106863-42106882 | None:intergenic | 45.0% | |
| GCAATTAAGGTGACTAGGGA+AGG | - | chr6_3:42106876-42106895 | None:intergenic | 45.0% | |
| GTGAGGCAATTAAGGTGACT+AGG | - | chr6_3:42106881-42106900 | None:intergenic | 45.0% | |
| AATTGCCTCACCTTACAAGC+CGG | + | chr6_3:42106890-42106909 | Msa0951400:intron | 45.0% | |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr6_3:42106903-42106922 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr6_3:42106900-42106919 | Msa0951400:intron | 45.0% |
| GTTCTGATAAAAAGGGACGG+TGG | + | chr6_3:42107600-42107619 | Msa0951400:intron | 45.0% | |
| CCAATGGCTGTCAAAGAGTT+AGG | - | chr6_3:42107684-42107703 | None:intergenic | 45.0% | |
| CCTAACTCTTTGACAGCCAT+TGG | + | chr6_3:42107681-42107700 | Msa0951400:intron | 45.0% | |
| !! | TCGCTATCTTTGCTGTTCAC+TGG | + | chr6_3:42107823-42107842 | Msa0951400:intron | 45.0% |
| AGTAGATATGGTCTCGCTGT+AGG | + | chr6_3:42107949-42107968 | Msa0951400:CDS | 45.0% | |
| ! | CTGTAGGTGCCAACTTTTCA+TGG | + | chr6_3:42107965-42107984 | Msa0951400:CDS | 45.0% |
| ACGCACAAGCCATGAAAAGT+TGG | - | chr6_3:42107977-42107996 | None:intergenic | 45.0% | |
| TACCCTCTTTCTTATCCGGT+TGG | + | chr6_3:42108015-42108034 | Msa0951400:CDS | 45.0% | |
| !! | GGAACGACGAGGCTTTATTT+AGG | + | chr6_3:42108174-42108193 | Msa0951400:CDS | 45.0% |
| TCTTGTCTCCATTCATGGCA+TGG | + | chr6_3:42108214-42108233 | Msa0951400:CDS | 45.0% | |
| TCCCAGCCTAAAAAACAAGC+AGG | - | chr6_3:42108343-42108362 | None:intergenic | 45.0% | |
| !!! | GTTTTTTAGGCTGGGAAAGG+GGG | + | chr6_3:42108347-42108366 | Msa0951400:intron | 45.0% |
| !! | CTGGGAAGCATCAATGATGT+TGG | + | chr6_3:42108590-42108609 | Msa0951400:intron | 45.0% |
| ! | TGGAAGTGAACGGTGAGTTT+TGG | - | chr6_3:42108676-42108695 | None:intergenic | 45.0% |
| CTAACGGAACACATGATCAC+TGG | - | chr6_3:42108696-42108715 | None:intergenic | 45.0% | |
| ! | TTTTGAACAGACTGCTGAGG+AGG | + | chr6_3:42108860-42108879 | Msa0951400:intron | 45.0% |
| !! | AGGAACGGTGTTGTTCACAA+AGG | - | chr6_3:42109128-42109147 | None:intergenic | 45.0% |
| TGGTCGCAATGATCATGTAG+CGG | - | chr6_3:42109242-42109261 | None:intergenic | 45.0% | |
| CTACATGATCATTGCGACCA+TGG | + | chr6_3:42109242-42109261 | Msa0951400:CDS | 45.0% | |
| ATGCCTCACAAGTTCTACCA+TGG | - | chr6_3:42109262-42109281 | None:intergenic | 45.0% | |
| CAACCATGGTAGAACTTGTG+AGG | + | chr6_3:42109335-42109354 | Msa0951400:CDS | 45.0% | |
| ATGCCTCACAAGTTCTACCA+TGG | - | chr6_3:42109262-42109281 | None:intergenic | 45.0% | |
| TGAGACGGTACAGTTGACAA+GGG | - | chr6_3:42109365-42109384 | None:intergenic | 45.0% | |
| CACTTAGAAGGGATAATCCC+CGG | - | chr6_3:42109467-42109486 | None:intergenic | 45.0% | |
| GCTCATGTGAGCACTTAGAA+GGG | - | chr6_3:42109478-42109497 | None:intergenic | 45.0% | |
| TGCTCATGTGAGCACTTAGA+AGG | - | chr6_3:42109479-42109498 | None:intergenic | 45.0% | |
| ! | TACCAAGAGCAATGACTTGG+GGG | + | chr6_3:42109530-42109549 | Msa0951400:intron | 45.0% |
| CTGGACCGAGCAAATCATTT+AGG | + | chr6_3:42109562-42109581 | Msa0951400:intron | 45.0% | |
| !! | TCGGCCCTAAATGATTTGCT+CGG | - | chr6_3:42109570-42109589 | None:intergenic | 45.0% |
| ! | GGTGGATCCTACTAGTTTGA+GGG | - | chr6_3:42109727-42109746 | None:intergenic | 45.0% |
| ! | ATGCCTCCCTGATTTGAGAT+AGG | - | chr6_3:42109839-42109858 | None:intergenic | 45.0% |
| ! | ATCTCAAATCAGGGAGGCAT+TGG | + | chr6_3:42109839-42109858 | Msa0951400:intron | 45.0% |
| !! | TCTCAAATCAGGGAGGCATT+GGG | + | chr6_3:42109840-42109859 | Msa0951400:intron | 45.0% |
| ! | GATAGATACTGCACTGACAG+GGG | - | chr6_3:42110078-42110097 | None:intergenic | 45.0% |
| ! | GGATAGATACTGCACTGACA+GGG | - | chr6_3:42110079-42110098 | None:intergenic | 45.0% |
| CTGTCAGTGCAGTATCTATC+CGG | + | chr6_3:42110078-42110097 | Msa0951400:CDS | 45.0% | |
| AAACACACCGTGGTATTCTC+CGG | - | chr6_3:42110100-42110119 | None:intergenic | 45.0% | |
| GTTGTGAAGACTACCGGAAA+AGG | + | chr6_3:42110269-42110288 | Msa0951400:CDS | 45.0% | |
| ! | CGGAGTTTCTTTGCCTTTTC+CGG | - | chr6_3:42110285-42110304 | None:intergenic | 45.0% |
| GTCAAGCCTTCAAAGCTTAC+TGG | + | chr6_3:42110422-42110441 | Msa0951400:CDS | 45.0% | |
| !!! | TTTTCTTTTTATAAATAATT+AGG | + | chr6_3:42110016-42110035 | Msa0951400:intron | 5.0% |
| !! | CTATCTGTCTGGTTCGGGTT+AGG | - | chr6_3:42105266-42105285 | None:intergenic | 50.0% |
| ! | GCAACATGGATTGCTTACGC+CGG | + | chr6_3:42105395-42105414 | Msa0951400:five_prime_UTR | 50.0% |
| CATGAGACCAAGTGTGAGAC+CGG | - | chr6_3:42105459-42105478 | None:intergenic | 50.0% | |
| TGTTGGACATCGCATGACAC+CGG | - | chr6_3:42105779-42105798 | None:intergenic | 50.0% | |
| GTGTCATGCGATGTCCAACA+CGG | + | chr6_3:42105779-42105798 | Msa0951400:intron | 50.0% | |
| !! | TGAAGCACTGATACGGACAC+CGG | - | chr6_3:42105895-42105914 | None:intergenic | 50.0% |
| GGGGCCTGGAAAGTAAACTT+AGG | - | chr6_3:42106431-42106450 | None:intergenic | 50.0% | |
| GGGGAGAACCACAATTAAGG+CGG | - | chr6_3:42106541-42106560 | None:intergenic | 50.0% | |
| GTCGCAATTTAGGCGACTAG+GGG | - | chr6_3:42106560-42106579 | None:intergenic | 50.0% | |
| GGTCGCAATTTAGGCGACTA+GGG | - | chr6_3:42106561-42106580 | None:intergenic | 50.0% | |
| AGGTCGCAATTTAGGCGACT+AGG | - | chr6_3:42106562-42106581 | None:intergenic | 50.0% | |
| GTCGCCTAAATTGCGACCTT+TGG | + | chr6_3:42106563-42106582 | Msa0951400:intron | 50.0% | |
| ! | GGGTGGATTTAGTCCCACAT+CGG | + | chr6_3:42106634-42106653 | Msa0951400:intron | 50.0% |
| ACACTCCTCACCTTACAAGC+TGG | + | chr6_3:42106694-42106713 | Msa0951400:intron | 50.0% | |
| GGGAAGGACCACAATTAAGG+CGG | - | chr6_3:42106860-42106879 | None:intergenic | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr6_3:42106898-42106917 | None:intergenic | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr6_3:42106898-42106917 | None:intergenic | 50.0% |
| GGGAAGGACCACAATTAAGG+CGG | - | chr6_3:42106860-42106879 | None:intergenic | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr6_3:42106898-42106917 | None:intergenic | 50.0% |
| GGGAAGGACCACAATTAAGG+CGG | - | chr6_3:42106860-42106879 | None:intergenic | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr6_3:42106898-42106917 | None:intergenic | 50.0% |
| TGGCTGTCAAAGAGTTAGGC+AGG | - | chr6_3:42107680-42107699 | None:intergenic | 50.0% | |
| TGTTCCATGGCATCAAGCTC+TGG | + | chr6_3:42108069-42108088 | Msa0951400:intron | 50.0% | |
| ATAGCCAGAGCTTGATGCCA+TGG | - | chr6_3:42108076-42108095 | None:intergenic | 50.0% | |
| !! | TCAGGTTCTGGATTGCGTAC+TGG | + | chr6_3:42108151-42108170 | Msa0951400:intron | 50.0% |
| !! | CAGGTTCTGGATTGCGTACT+GGG | + | chr6_3:42108152-42108171 | Msa0951400:intron | 50.0% |
| !! | AGGTTCTGGATTGCGTACTG+GGG | + | chr6_3:42108153-42108172 | Msa0951400:intron | 50.0% |
| TGTCTCCATTCATGGCATGG+AGG | + | chr6_3:42108217-42108236 | Msa0951400:CDS | 50.0% | |
| TGTCTTCTATTTGGGCACGC+TGG | + | chr6_3:42108571-42108590 | Msa0951400:intron | 50.0% | |
| GTCTTCTATTTGGGCACGCT+GGG | + | chr6_3:42108572-42108591 | Msa0951400:intron | 50.0% | |
| TGGAACGGAGCTGTTCACAA+AGG | - | chr6_3:42109049-42109068 | None:intergenic | 50.0% | |
| CGAGCATACTTGCGATGGAA+CGG | - | chr6_3:42109064-42109083 | None:intergenic | 50.0% | |
| CCATGATCGAGCTGATTGAG+TGG | - | chr6_3:42109087-42109106 | None:intergenic | 50.0% | |
| CCACTCAATCAGCTCGATCA+TGG | + | chr6_3:42109084-42109103 | Msa0951400:intron | 50.0% | |
| CGGGCATATCTGAGAAGGAA+CGG | - | chr6_3:42109143-42109162 | None:intergenic | 50.0% | |
| TGGTAGCTACGACTATGTGG+CGG | - | chr6_3:42109163-42109182 | None:intergenic | 50.0% | |
| CCATGGTAGCTACGACTATG+TGG | - | chr6_3:42109166-42109185 | None:intergenic | 50.0% | |
| CCACATAGTCGTAGCTACCA+TGG | + | chr6_3:42109163-42109182 | Msa0951400:intron | 50.0% | |
| CTACCATGGCAGAACTTGTG+AGG | + | chr6_3:42109177-42109196 | Msa0951400:intron | 50.0% | |
| ATGCCTCACAAGTTCTGCCA+TGG | - | chr6_3:42109183-42109202 | None:intergenic | 50.0% | |
| TAGAACGGGGCAGTTCACAA+AGG | - | chr6_3:42109207-42109226 | None:intergenic | 50.0% | |
| GGCATACCTGTGATAGAACG+GGG | - | chr6_3:42109220-42109239 | None:intergenic | 50.0% | |
| GGGCATACCTGTGATAGAAC+GGG | - | chr6_3:42109221-42109240 | None:intergenic | 50.0% | |
| CGGGCATACCTGTGATAGAA+CGG | - | chr6_3:42109222-42109241 | None:intergenic | 50.0% | |
| GGTCGCAATGATCATGTAGC+GGG | - | chr6_3:42109241-42109260 | None:intergenic | 50.0% | |
| CGACCATGGTAGAACTTGTG+AGG | + | chr6_3:42109256-42109275 | Msa0951400:CDS | 50.0% | |
| !! | TGGAACGGTGCTGTTCACAA+GGG | - | chr6_3:42109286-42109305 | None:intergenic | 50.0% |
| GTGAGACGGTACAGTTGACA+AGG | - | chr6_3:42109366-42109385 | None:intergenic | 50.0% | |
| TGAGCATGTTCGCAGTGAGA+CGG | - | chr6_3:42109380-42109399 | None:intergenic | 50.0% | |
| GAGGAACATGTTCGTACCAG+TGG | - | chr6_3:42109421-42109440 | None:intergenic | 50.0% | |
| ! | ACCAAGAGCAATGACTTGGG+GGG | + | chr6_3:42109531-42109550 | Msa0951400:intron | 50.0% |
| ! | GGGTGGATCCTACTAGTTTG+AGG | - | chr6_3:42109728-42109747 | None:intergenic | 50.0% |
| ! | CTCCCTGATTTGAGATAGGC+AGG | - | chr6_3:42109835-42109854 | None:intergenic | 50.0% |
| CTGCCTATCTCAAATCAGGG+AGG | + | chr6_3:42109833-42109852 | Msa0951400:intron | 50.0% | |
| TTGGGAAAGATTCTTGCCCG+CGG | + | chr6_3:42109858-42109877 | Msa0951400:CDS | 50.0% | |
| ! | CGGATAGATACTGCACTGAC+AGG | - | chr6_3:42110080-42110099 | None:intergenic | 50.0% |
| GCTGCTGTTGTGAAGACTAC+CGG | + | chr6_3:42110263-42110282 | Msa0951400:CDS | 50.0% | |
| !! | CTGGTTCGGGTTAGGATCCA+AGG | - | chr6_3:42105258-42105277 | None:intergenic | 55.0% |
| ! | CTTCGTTGGTGAGAGCAAGG+TGG | - | chr6_3:42105358-42105377 | None:intergenic | 55.0% |
| CACCTTGCTCTCACCAACGA+AGG | + | chr6_3:42105356-42105375 | Msa0951400:five_prime_UTR | 55.0% | |
| ! | TGCCTTCGTTGGTGAGAGCA+AGG | - | chr6_3:42105361-42105380 | None:intergenic | 55.0% |
| CTCTTTGCCGGAGTCATGTC+CGG | + | chr6_3:42105437-42105456 | Msa0951400:five_prime_UTR | 55.0% | |
| TGTGAGACCGGACATGACTC+CGG | - | chr6_3:42105447-42105466 | None:intergenic | 55.0% | |
| GTCATGTCCGGTCTCACACT+TGG | + | chr6_3:42105449-42105468 | Msa0951400:five_prime_UTR | 55.0% | |
| ACACGGACACTCCTCGGATT+AGG | + | chr6_3:42105616-42105635 | Msa0951400:intron | 55.0% | |
| TGTCGGACCGTGTACAACAC+CGG | - | chr6_3:42105648-42105667 | None:intergenic | 55.0% | |
| TCACGGACAGTCCTCGGATT+AGG | + | chr6_3:42105747-42105766 | Msa0951400:intron | 55.0% | |
| GTTGGACATCGCATGACACC+GGG | - | chr6_3:42105778-42105797 | None:intergenic | 55.0% | |
| ACTGATACGGACACCGGACA+CGG | - | chr6_3:42105889-42105908 | None:intergenic | 55.0% | |
| TGCAGCGATCATTCTTCCGG+TGG | + | chr6_3:42105929-42105948 | Msa0951400:intron | 55.0% | |
| ! | GGTGTTGGAGGCTGCAATGA+TGG | - | chr6_3:42106593-42106612 | None:intergenic | 55.0% |
| !! | TTGTGTTGGCTTTGAGGGGG+TGG | + | chr6_3:42106617-42106636 | Msa0951400:intron | 55.0% |
| ! | TGAAGCGTGAGGAGGTGTGT+GGG | + | chr6_3:42106829-42106848 | Msa0951400:intron | 55.0% |
| ! | TGAAGCGTGAGGAGGTGTGT+GGG | + | chr6_3:42106829-42106848 | Msa0951400:intron | 55.0% |
| ! | TGAAGCGTGAGGAGGTGTGT+GGG | + | chr6_3:42106829-42106848 | Msa0951400:intron | 55.0% |
| AGTGGCGAGCATACTTGCGA+TGG | - | chr6_3:42109069-42109088 | None:intergenic | 55.0% | |
| !! | TGTGGCGGGCATATCTGAGA+AGG | - | chr6_3:42109148-42109167 | None:intergenic | 55.0% |
| GGTAGCTACGACTATGTGGC+GGG | - | chr6_3:42109162-42109181 | None:intergenic | 55.0% | |
| GAACTGCCCCGTTCTATCAC+AGG | + | chr6_3:42109211-42109230 | Msa0951400:intron | 55.0% | |
| !! | GTGGAACGGTGCTGTTCACA+AGG | - | chr6_3:42109287-42109306 | None:intergenic | 55.0% |
| CTATCACAGGCACACACCAC+TGG | + | chr6_3:42109402-42109421 | Msa0951400:intron | 55.0% | |
| GTGATGACTTTGTAGGGGCG+AGG | - | chr6_3:42109506-42109525 | None:intergenic | 55.0% | |
| TGGGAAAGATTCTTGCCCGC+GGG | + | chr6_3:42109859-42109878 | Msa0951400:CDS | 55.0% | |
| CTGACAGGGGTCTCTGATTC+AGG | - | chr6_3:42110065-42110084 | None:intergenic | 55.0% | |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | + | chr6_3:42105626-42105645 | Msa0951400:intron | 60.0% |
| !! | GCGTGTCCCGGTGTTGTACA+CGG | + | chr6_3:42105638-42105657 | Msa0951400:intron | 60.0% |
| GTCGGACCGTGTACAACACC+GGG | - | chr6_3:42105647-42105666 | None:intergenic | 60.0% | |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | + | chr6_3:42105626-42105645 | Msa0951400:intron | 60.0% |
| ! | CTGAAGCGTGAGGAGGTGTG+TGG | + | chr6_3:42106828-42106847 | Msa0951400:intron | 60.0% |
| CTATGCTGGGCTGAAGCGTG+AGG | + | chr6_3:42107087-42107106 | Msa0951400:intron | 60.0% | |
| ! | CTGAAGCGTGAGGAGGTGTG+TGG | + | chr6_3:42106828-42106847 | Msa0951400:intron | 60.0% |
| CTATGCTGGGCTGAAGCGTG+AGG | + | chr6_3:42107087-42107106 | Msa0951400:intron | 60.0% | |
| ! | CTGAAGCGTGAGGAGGTGTG+TGG | + | chr6_3:42106828-42106847 | Msa0951400:intron | 60.0% |
| TTGCGTACTGGGGAACGACG+AGG | + | chr6_3:42108163-42108182 | Msa0951400:CDS | 60.0% | |
| GCCCCCCAAGTCATTGCTCT+TGG | - | chr6_3:42109535-42109554 | None:intergenic | 60.0% | |
| GACTTGGGGGGCTACTGTTC+TGG | + | chr6_3:42109543-42109562 | Msa0951400:intron | 60.0% | |
| ACCGGGACACGCCTAATCCG+AGG | - | chr6_3:42105630-42105649 | None:intergenic | 65.0% | |
| ACCGGGACACGCCTAATCCG+AGG | - | chr6_3:42105630-42105649 | None:intergenic | 65.0% | |
| ! | TGTGTCGGCGTGTCCGTGTC+CGG | + | chr6_3:42105873-42105892 | Msa0951400:intron | 65.0% |
| TCCCGCATAGCCCACGCTTC+AGG | + | chr6_3:42106791-42106810 | Msa0951400:intron | 65.0% | |
| ! | GCCTGAAGCGTGGGCTATGC+GGG | - | chr6_3:42106795-42106814 | None:intergenic | 65.0% |
| ! | GGCCTGAAGCGTGGGCTATG+CGG | - | chr6_3:42106796-42106815 | None:intergenic | 65.0% |
| ACGCTTCAGCCCAGCCCAGT+GGG | - | chr6_3:42106817-42106836 | None:intergenic | 65.0% | |
| TGCTGGGCTGAAGCGTGAGG+AGG | + | chr6_3:42107090-42107109 | Msa0951400:intron | 65.0% | |
| TGCTGGGCTGAAGCGTGAGG+AGG | + | chr6_3:42107090-42107109 | Msa0951400:intron | 65.0% | |
| AGCCCACGCTTCAGGCCCAC+TGG | + | chr6_3:42106799-42106818 | Msa0951400:intron | 70.0% | |
| GCCCACGCTTCAGGCCCACT+GGG | + | chr6_3:42106800-42106819 | Msa0951400:intron | 70.0% | |
| GCCCAGTGGGCCTGAAGCGT+GGG | - | chr6_3:42106804-42106823 | None:intergenic | 70.0% | |
| AGCCCAGTGGGCCTGAAGCG+TGG | - | chr6_3:42106805-42106824 | None:intergenic | 70.0% | |
| ACGCTTCAGGCCCACTGGGC+TGG | + | chr6_3:42106804-42106823 | Msa0951400:intron | 70.0% | |
| CGCTTCAGGCCCACTGGGCT+GGG | + | chr6_3:42106805-42106824 | Msa0951400:intron | 70.0% | |
| CACGCTTCAGCCCAGCCCAG+TGG | - | chr6_3:42106818-42106837 | None:intergenic | 70.0% | |
| ! | CTGGGCTGGGCTGAAGCGTG+AGG | + | chr6_3:42106818-42106837 | Msa0951400:intron | 70.0% |
| GGCTGGGCTGAAGCGTGAGG+AGG | + | chr6_3:42106821-42106840 | Msa0951400:intron | 70.0% | |
| AGGAACTCGGCTGTGCCCGC+GGG | - | chr6_3:42109877-42109896 | None:intergenic | 70.0% | |
| CAGGAACTCGGCTGTGCCCG+CGG | - | chr6_3:42109878-42109897 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 42105178 | 42110613 | 42105178 | ID=Msa0951400;Name=Msa0951400 |
| chr6_3 | mRNA | 42105178 | 42110613 | 42105178 | ID=Msa0951400-mRNA-1;Parent=Msa0951400;Name=Msa0951400-mRNA-1;_AED=0.21;_eAED=0.21;_QI=459|0.8|0.81|0.90|0.9|0.90|11|0|384 |
| chr6_3 | exon | 42105178 | 42105545 | 42105178 | ID=Msa0951400-mRNA-1:exon:9874;Parent=Msa0951400-mRNA-1 |
| chr6_3 | exon | 42105934 | 42106010 | 42105934 | ID=Msa0951400-mRNA-1:exon:9875;Parent=Msa0951400-mRNA-1 |
| chr6_3 | exon | 42107697 | 42107809 | 42107697 | ID=Msa0951400-mRNA-1:exon:9876;Parent=Msa0951400-mRNA-1 |
| chr6_3 | exon | 42107928 | 42108041 | 42107928 | ID=Msa0951400-mRNA-1:exon:9877;Parent=Msa0951400-mRNA-1 |
| chr6_3 | exon | 42108155 | 42108238 | 42108155 | ID=Msa0951400-mRNA-1:exon:9878;Parent=Msa0951400-mRNA-1 |
| chr6_3 | exon | 42108356 | 42108427 | 42108356 | ID=Msa0951400-mRNA-1:exon:9879;Parent=Msa0951400-mRNA-1 |
| chr6_3 | exon | 42108870 | 42108937 | 42108870 | ID=Msa0951400-mRNA-1:exon:9880;Parent=Msa0951400-mRNA-1 |
| chr6_3 | exon | 42109233 | 42109373 | 42109233 | ID=Msa0951400-mRNA-1:exon:9881;Parent=Msa0951400-mRNA-1 |
| chr6_3 | exon | 42109851 | 42109938 | 42109851 | ID=Msa0951400-mRNA-1:exon:9882;Parent=Msa0951400-mRNA-1 |
| chr6_3 | exon | 42110038 | 42110111 | 42110038 | ID=Msa0951400-mRNA-1:exon:9883;Parent=Msa0951400-mRNA-1 |
| chr6_3 | exon | 42110199 | 42110613 | 42110199 | ID=Msa0951400-mRNA-1:exon:9884;Parent=Msa0951400-mRNA-1 |
| chr6_3 | five_prime_UTR | 42105178 | 42105545 | 42105178 | ID=Msa0951400-mRNA-1:five_prime_utr;Parent=Msa0951400-mRNA-1 |
| chr6_3 | five_prime_UTR | 42105934 | 42106010 | 42105934 | ID=Msa0951400-mRNA-1:five_prime_utr;Parent=Msa0951400-mRNA-1 |
| chr6_3 | five_prime_UTR | 42107697 | 42107710 | 42107697 | ID=Msa0951400-mRNA-1:five_prime_utr;Parent=Msa0951400-mRNA-1 |
| chr6_3 | CDS | 42107711 | 42107809 | 42107711 | ID=Msa0951400-mRNA-1:cds;Parent=Msa0951400-mRNA-1 |
| chr6_3 | CDS | 42107928 | 42108041 | 42107928 | ID=Msa0951400-mRNA-1:cds;Parent=Msa0951400-mRNA-1 |
| chr6_3 | CDS | 42108155 | 42108238 | 42108155 | ID=Msa0951400-mRNA-1:cds;Parent=Msa0951400-mRNA-1 |
| chr6_3 | CDS | 42108356 | 42108427 | 42108356 | ID=Msa0951400-mRNA-1:cds;Parent=Msa0951400-mRNA-1 |
| chr6_3 | CDS | 42108870 | 42108937 | 42108870 | ID=Msa0951400-mRNA-1:cds;Parent=Msa0951400-mRNA-1 |
| chr6_3 | CDS | 42109233 | 42109373 | 42109233 | ID=Msa0951400-mRNA-1:cds;Parent=Msa0951400-mRNA-1 |
| chr6_3 | CDS | 42109851 | 42109938 | 42109851 | ID=Msa0951400-mRNA-1:cds;Parent=Msa0951400-mRNA-1 |
| chr6_3 | CDS | 42110038 | 42110111 | 42110038 | ID=Msa0951400-mRNA-1:cds;Parent=Msa0951400-mRNA-1 |
| chr6_3 | CDS | 42110199 | 42110613 | 42110199 | ID=Msa0951400-mRNA-1:cds;Parent=Msa0951400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
