AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1034270


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1034270 MtrunA17_Chr7g0257131 85.746 449 25 2 1 420 1 439 0.0 781
Msa1034270 MtrunA17_Chr1g0159631 73.222 239 63 1 1 238 27 265 9.24e-117 360
Msa1034270 MtrunA17_Chr7g0257141 76.786 224 23 1 187 381 4 227 9.61e-115 335
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1034270 AT1G77320.2 40.400 250 135 4 1 247 220 458 3.50e-48 176
Msa1034270 AT1G77320.3 40.400 250 135 4 1 247 237 475 3.58e-48 177
Msa1034270 AT1G77320.1 40.400 250 135 4 1 247 237 475 3.86e-48 176

Find 88 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAAGTTAGGTCCTCTTTA+TGG 0.208714 7_1:-69710701 Msa1034270:CDS
TGAGGAGGATTGTAAGTCTA+AGG 0.252399 7_1:-69710630 Msa1034270:CDS
CTCTGTGCCCTCTTTGAATA+TGG 0.262226 7_1:+69710362 None:intergenic
TCATTGTCACAATATTAATA+TGG 0.268431 7_1:+69712316 None:intergenic
CATAGTCAGGAAAAGGATAT+TGG 0.302597 7_1:-69711986 Msa1034270:CDS
GCATAAGATGGCAAAACTTT+GGG 0.308549 7_1:-69712340 Msa1034270:exon
TTGATTATGCTGCTTCTTGT+AGG 0.312007 7_1:-69710820 Msa1034270:CDS
ATTGTGCACCTCCTGTTCTT+CGG 0.321361 7_1:+69710325 None:intergenic
AAGAAAGCAATGGAGGAGTT+TGG 0.323395 7_1:-69710569 Msa1034270:CDS
TTGTGCACCTCCTGTTCTTC+GGG 0.333272 7_1:+69710326 None:intergenic
ATTAAAGTTCAATTCATTGC+TGG 0.358393 7_1:+69711793 None:intergenic
AATGGAGAAGCTAAGTAATA+TGG 0.365938 7_1:-69711681 Msa1034270:CDS
AATAAAGATCCACTCTGAAC+AGG 0.382879 7_1:+69712043 None:intergenic
ATCTTATGCTTATCACCTTC+AGG 0.403746 7_1:+69712354 None:intergenic
AGCATAAGATGGCAAAACTT+TGG 0.410307 7_1:-69712341 Msa1034270:exon
TTAATATTGTGACAATGAAA+TGG 0.413497 7_1:-69712311 Msa1034270:CDS
AATTCATTGCTGGTCTGTAA+TGG 0.425432 7_1:+69711803 None:intergenic
ATAGTCAGGAAAAGGATATT+GGG 0.425831 7_1:-69711985 Msa1034270:CDS
GCGCGTTTGCTTCGAGATTG+AGG 0.429821 7_1:-69710786 Msa1034270:CDS
ATGGATAGCATGTCTGAATC+AGG 0.436518 7_1:-69712074 Msa1034270:intron
GTCATCAGATTCAGAATCAT+TGG 0.438425 7_1:+69711760 None:intergenic
GAATAGACTCACATTTCTGT+TGG 0.448184 7_1:+69711590 None:intergenic
CTCAACAGCGCAGCATAGTC+AGG 0.448400 7_1:-69711999 Msa1034270:CDS
ATTACGCTGTTAAAACCTCT+TGG 0.454206 7_1:-69711315 Msa1034270:CDS
TAATGATCAGCCCGAAGAAC+AGG 0.456778 7_1:-69710336 Msa1034270:CDS
TATCATTTAAATACAAGCAT+TGG 0.466348 7_1:+69711639 None:intergenic
GATGACTTGAGGGCAAAGTT+AGG 0.468171 7_1:-69710713 Msa1034270:CDS
CTTGAATGATCCGGTTAGAA+AGG 0.471395 7_1:-69710504 Msa1034270:CDS
TGAGGCTTATAAGCTTTATG+AGG 0.472144 7_1:-69710648 Msa1034270:CDS
AAGAACAGGAGGTGCACAAT+GGG 0.490004 7_1:-69710322 Msa1034270:CDS
AATTCAAAGATTTGTTATTG+AGG 0.494464 7_1:-69712420 Msa1034270:five_prime_UTR
GATATTGGGAAAATGCAATC+TGG 0.498766 7_1:-69711971 Msa1034270:CDS
ATTTGAATCTGCGGCTCTTG+AGG 0.500270 7_1:+69711943 None:intergenic
AAACATTGAGAGCCACTTCA+AGG 0.500931 7_1:-69710480 Msa1034270:CDS
TGTTACGTACTTGAATGATC+CGG 0.504932 7_1:-69710513 Msa1034270:CDS
AGTAATATGGTGCGTAAAGG+TGG 0.506996 7_1:-69711668 Msa1034270:CDS
AACTAGTATATTTGAATCTG+CGG 0.510360 7_1:+69711934 None:intergenic
TCACTGATTGTAAGTACAGA+AGG 0.511963 7_1:+69712513 None:intergenic
GGAATTAAAGAGACGACAAA+AGG 0.513312 7_1:-69710765 Msa1034270:CDS
ATCTCTAAGCATCATGAGAT+GGG 0.513813 7_1:-69710596 Msa1034270:CDS
AGGATCAACATTTAAAGACT+TGG 0.515103 7_1:+69711904 None:intergenic
CTGAATCTGATGACGATGAC+AGG 0.515831 7_1:-69711751 Msa1034270:CDS
GGCTTATAAGCTTTATGAGG+AGG 0.520574 7_1:-69710645 Msa1034270:CDS
AAGAATCGATGATGACTTGA+GGG 0.520648 7_1:-69710723 Msa1034270:CDS
CACTGTACCGTCGTAGAACA+TGG 0.521282 7_1:+69711260 None:intergenic
TGTTAAAACCTCTTGGCTTG+AGG 0.521313 7_1:-69711308 Msa1034270:CDS
AGCGCAGCATAGTCAGGAAA+AGG 0.526174 7_1:-69711993 Msa1034270:CDS
GACTGTTCTTACGCTCCTGA+AGG 0.535304 7_1:-69712369 Msa1034270:five_prime_UTR
CATCTCTAAGCATCATGAGA+TGG 0.536901 7_1:-69710597 Msa1034270:CDS
TATTGTCACGTAAGGTGACT+AGG 0.538277 7_1:-69712024 Msa1034270:CDS
TGGATCTTTATTGTCACGTA+AGG 0.539831 7_1:-69712032 Msa1034270:CDS
AGTTGACGCACATAGTAGTC+GGG 0.543297 7_1:-69711616 Msa1034270:CDS
CTAAGTAATATGGTGCGTAA+AGG 0.550132 7_1:-69711671 Msa1034270:CDS
GGGATTTAAGAAAGCAATGG+AGG 0.551560 7_1:-69710576 Msa1034270:CDS
GATGAATCTATTGCTCAAAG+AGG 0.554272 7_1:-69712285 Msa1034270:intron
CACTGATTGTAAGTACAGAA+GGG 0.560350 7_1:+69712514 None:intergenic
AACATTGAGAGCCACTTCAA+GGG 0.562116 7_1:-69710479 Msa1034270:CDS
TCAAAATCTTCCCCTTGAAG+TGG 0.564250 7_1:+69710468 None:intergenic
GTATTGAGAACTGTTGCTCT+AGG 0.565174 7_1:-69711343 Msa1034270:CDS
TGTGCCCTCTTTGAATATGG+AGG 0.571879 7_1:+69710365 None:intergenic
TGAAGGTGATAAGCATAAGA+TGG 0.576251 7_1:-69712352 Msa1034270:exon
AAGTTGACGCACATAGTAGT+CGG 0.576552 7_1:-69711617 Msa1034270:CDS
GAGGAGGATTGTAAGTCTAA+GGG 0.581483 7_1:-69710629 Msa1034270:CDS
AATATGGTGCGTAAAGGTGG+AGG 0.581922 7_1:-69711665 Msa1034270:CDS
ACGACAAAAGGAGATGGAGA+TGG 0.591211 7_1:-69710753 Msa1034270:CDS
AAAGAGACGACAAAAGGAGA+TGG 0.591489 7_1:-69710759 Msa1034270:CDS
GATGGGATTTAAGAAAGCAA+TGG 0.597083 7_1:-69710579 Msa1034270:CDS
TAAGAATCGATGATGACTTG+AGG 0.600122 7_1:-69710724 Msa1034270:CDS
TGTTGACTTAGCACAAGTGC+TGG 0.601901 7_1:-69710843 Msa1034270:intron
ATAAAGATCCACTCTGAACA+GGG 0.605959 7_1:+69712044 None:intergenic
CATAAGATGGCAAAACTTTG+GGG 0.617476 7_1:-69712339 Msa1034270:exon
ACATTGAGAGCCACTTCAAG+GGG 0.623903 7_1:-69710478 Msa1034270:CDS
CATCTCATGATGCTTAGAGA+TGG 0.626228 7_1:+69710598 None:intergenic
ATAAGCCTCCATATTCAAAG+AGG 0.630021 7_1:-69710370 Msa1034270:CDS
AGATCCACTCTGAACAGGGT+AGG 0.631294 7_1:+69712048 None:intergenic
TGTGATAAGATTGATCCTGA+TGG 0.635838 7_1:-69710437 Msa1034270:CDS
GAAGAACAGGAGGTGCACAA+TGG 0.637862 7_1:-69710323 Msa1034270:CDS
TGATCAGCCCGAAGAACAGG+AGG 0.646039 7_1:-69710333 Msa1034270:CDS
ACAGAAGGGATACTAATGCA+AGG 0.652607 7_1:+69712528 None:intergenic
ATTGAACTTTAATCGAGCTG+TGG 0.657516 7_1:-69711783 Msa1034270:CDS
GAGTCCTACCCTGTTCAGAG+TGG 0.662340 7_1:-69712052 Msa1034270:CDS
TCATTGCTGGTCTGTAATGG+AGG 0.662412 7_1:+69711806 None:intergenic
AACAAGTCCATGTTCTACGA+CGG 0.663053 7_1:-69711267 Msa1034270:CDS
TAAGCCTCCATATTCAAAGA+GGG 0.664645 7_1:-69710369 Msa1034270:CDS
TTGTTATTGAGGTTTGAACG+TGG 0.665672 7_1:-69712409 Msa1034270:five_prime_UTR
ATCACAATCCTCAAGCCAAG+AGG 0.666970 7_1:+69711300 None:intergenic
ACTTAATTATTCAGTCAGAG+AGG 0.690447 7_1:+69712448 None:intergenic
TATTCAAAGAGGGCACAGAG+TGG 0.749556 7_1:-69710359 Msa1034270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATATATTTGTTTTGTA+AGG - chr7_1:69710358-69710377 Msa1034270:CDS 10.0%
!!! TTATTTTTCGTATTTTTATA+TGG - chr7_1:69710865-69710884 Msa1034270:intron 10.0%
!! GATATTAAGAATAAATTTAA+TGG - chr7_1:69711392-69711411 Msa1034270:intron 10.0%
!!! TTTTATATATTTGTTTTGTA+AGG - chr7_1:69710358-69710377 Msa1034270:CDS 10.0%
!!! TTATTTTTCGTATTTTTATA+TGG - chr7_1:69710865-69710884 Msa1034270:intron 10.0%
!! GATATTAAGAATAAATTTAA+TGG - chr7_1:69711392-69711411 Msa1034270:intron 10.0%
!! TAAATCATAAATATAGGAAA+AGG + chr7_1:69711555-69711574 None:intergenic 15.0%
!! AGAAGATAAATCATAAATAT+AGG + chr7_1:69711561-69711580 None:intergenic 15.0%
!!! TTTTCTAAGTTCTTAAATTT+AGG - chr7_1:69711854-69711873 Msa1034270:CDS 15.0%
!! TAAATCATAAATATAGGAAA+AGG + chr7_1:69711555-69711574 None:intergenic 15.0%
!! AGAAGATAAATCATAAATAT+AGG + chr7_1:69711561-69711580 None:intergenic 15.0%
!!! TTTTCTAAGTTCTTAAATTT+AGG - chr7_1:69711854-69711873 Msa1034270:CDS 15.0%
!!! AAGTTGAAATTTTGTTTAAC+AGG - chr7_1:69710302-69710321 Msa1034270:CDS 20.0%
!!! AATTCAAAGATTTGTTATTG+AGG - chr7_1:69710538-69710557 Msa1034270:CDS 20.0%
!! TCATTGTCACAATATTAATA+TGG + chr7_1:69710645-69710664 None:intergenic 20.0%
!! TTAATATTGTGACAATGAAA+TGG - chr7_1:69710647-69710666 Msa1034270:CDS 20.0%
!! TTATCAAGAAAATAAGTGTA+AGG + chr7_1:69710801-69710820 None:intergenic 20.0%
!! TATCATTTAAATACAAGCAT+TGG + chr7_1:69711322-69711341 None:intergenic 20.0%
!! TAAATATAGGAAAAGGAATA+TGG + chr7_1:69711548-69711567 None:intergenic 20.0%
!!! TATGATATTCTTTTTCCAAA+AGG - chr7_1:69711723-69711742 Msa1034270:CDS 20.0%
!!! ATTCTTCTTTTTTATCCTAT+TGG + chr7_1:69712066-69712085 None:intergenic 20.0%
!!! AAGTTGAAATTTTGTTTAAC+AGG - chr7_1:69710302-69710321 Msa1034270:CDS 20.0%
!!! AATTCAAAGATTTGTTATTG+AGG - chr7_1:69710538-69710557 Msa1034270:CDS 20.0%
!! TCATTGTCACAATATTAATA+TGG + chr7_1:69710645-69710664 None:intergenic 20.0%
!! TTAATATTGTGACAATGAAA+TGG - chr7_1:69710647-69710666 Msa1034270:CDS 20.0%
!! TTATCAAGAAAATAAGTGTA+AGG + chr7_1:69710801-69710820 None:intergenic 20.0%
!! TATCATTTAAATACAAGCAT+TGG + chr7_1:69711322-69711341 None:intergenic 20.0%
!! TAAATATAGGAAAAGGAATA+TGG + chr7_1:69711548-69711567 None:intergenic 20.0%
!!! TATGATATTCTTTTTCCAAA+AGG - chr7_1:69711723-69711742 Msa1034270:CDS 20.0%
!!! ATTCTTCTTTTTTATCCTAT+TGG + chr7_1:69712066-69712085 None:intergenic 20.0%
! GTAAGGAAATGAAAGAATAA+CGG + chr7_1:69710784-69710803 None:intergenic 25.0%
! AACTAGTATATTTGAATCTG+CGG + chr7_1:69711027-69711046 None:intergenic 25.0%
!!! TGTTCCATTTTTTGTTAAAG+AGG - chr7_1:69711115-69711134 Msa1034270:intron 25.0%
! ATTAAAGTTCAATTCATTGC+TGG + chr7_1:69711168-69711187 None:intergenic 25.0%
! GCTTTCCTATGAATTTAATT+TGG - chr7_1:69711518-69711537 Msa1034270:intron 25.0%
! GTTTGCCAAATTAAATTCAT+AGG + chr7_1:69711526-69711545 None:intergenic 25.0%
!!! CTACTTTTTGGTTATCTATT+AGG - chr7_1:69711786-69711805 Msa1034270:CDS 25.0%
!!! TAGGTAACATAGTCTTTTTT+AGG - chr7_1:69711873-69711892 Msa1034270:CDS 25.0%
! CATTCAAACACTTAATAAAG+TGG + chr7_1:69712013-69712032 None:intergenic 25.0%
! CACTTTATTAAGTGTTTGAA+TGG - chr7_1:69712011-69712030 Msa1034270:CDS 25.0%
! AAAGAAGAATCTAGAAATGA+AGG - chr7_1:69712076-69712095 Msa1034270:intron 25.0%
!!! TCAATCTTCAACTCATTTTT+AGG + chr7_1:69712293-69712312 None:intergenic 25.0%
!! TAAAAATGAGTTGAAGATTG+AGG - chr7_1:69712292-69712311 Msa1034270:CDS 25.0%
! GTAAGGAAATGAAAGAATAA+CGG + chr7_1:69710784-69710803 None:intergenic 25.0%
! AACTAGTATATTTGAATCTG+CGG + chr7_1:69711027-69711046 None:intergenic 25.0%
!!! TGTTCCATTTTTTGTTAAAG+AGG - chr7_1:69711115-69711134 Msa1034270:intron 25.0%
! ATTAAAGTTCAATTCATTGC+TGG + chr7_1:69711168-69711187 None:intergenic 25.0%
! GCTTTCCTATGAATTTAATT+TGG - chr7_1:69711518-69711537 Msa1034270:intron 25.0%
! GTTTGCCAAATTAAATTCAT+AGG + chr7_1:69711526-69711545 None:intergenic 25.0%
!!! CTACTTTTTGGTTATCTATT+AGG - chr7_1:69711786-69711805 Msa1034270:CDS 25.0%
!!! TAGGTAACATAGTCTTTTTT+AGG - chr7_1:69711873-69711892 Msa1034270:CDS 25.0%
! CATTCAAACACTTAATAAAG+TGG + chr7_1:69712013-69712032 None:intergenic 25.0%
! CACTTTATTAAGTGTTTGAA+TGG - chr7_1:69712011-69712030 Msa1034270:CDS 25.0%
! AAAGAAGAATCTAGAAATGA+AGG - chr7_1:69712076-69712095 Msa1034270:intron 25.0%
!!! TCAATCTTCAACTCATTTTT+AGG + chr7_1:69712293-69712312 None:intergenic 25.0%
!! TAAAAATGAGTTGAAGATTG+AGG - chr7_1:69712292-69712311 Msa1034270:CDS 25.0%
ACTTAATTATTCAGTCAGAG+AGG + chr7_1:69710513-69710532 None:intergenic 30.0%
ATAGTCAGGAAAAGGATATT+GGG - chr7_1:69710973-69710992 Msa1034270:intron 30.0%
AGGATCAACATTTAAAGACT+TGG + chr7_1:69711057-69711076 None:intergenic 30.0%
TCTGCCTCTTTAACAAAAAA+TGG + chr7_1:69711122-69711141 None:intergenic 30.0%
!!! TGATTTTGAAGCTTCTGAAA+TGG - chr7_1:69711259-69711278 Msa1034270:CDS 30.0%
AATGGAGAAGCTAAGTAATA+TGG - chr7_1:69711277-69711296 Msa1034270:CDS 30.0%
! GGATATTAGTTTCAGAAATG+TGG - chr7_1:69711496-69711515 Msa1034270:intron 30.0%
!! ATTTGTGTTTTTACAGGGAA+AGG - chr7_1:69711586-69711605 Msa1034270:intron 30.0%
!! TTTGTGTTTTTACAGGGAAA+GGG - chr7_1:69711587-69711606 Msa1034270:intron 30.0%
! AAACATGATAACACACCTTT+TGG + chr7_1:69711741-69711760 None:intergenic 30.0%
!!! CATAGTCTTTTTTAGGAGTT+TGG - chr7_1:69711880-69711899 Msa1034270:CDS 30.0%
ATAAAGTGGCAGAAATCATA+AGG + chr7_1:69711999-69712018 None:intergenic 30.0%
ATTAAGTGTTTGAATGGTTC+AGG - chr7_1:69712017-69712036 Msa1034270:CDS 30.0%
!! TCAACTCATTTTTAGGCTTT+TGG + chr7_1:69712286-69712305 None:intergenic 30.0%
! TCAATGTTTTCCTTTCTAAC+CGG + chr7_1:69712467-69712486 None:intergenic 30.0%
! TAAACAAATTTTGCACCATC+AGG + chr7_1:69712539-69712558 None:intergenic 30.0%
AAATGAAATATGAACCGTGA+TGG - chr7_1:69712669-69712688 Msa1034270:five_prime_UTR 30.0%
ACTTAATTATTCAGTCAGAG+AGG + chr7_1:69710513-69710532 None:intergenic 30.0%
ATAGTCAGGAAAAGGATATT+GGG - chr7_1:69710973-69710992 Msa1034270:intron 30.0%
AGGATCAACATTTAAAGACT+TGG + chr7_1:69711057-69711076 None:intergenic 30.0%
TCTGCCTCTTTAACAAAAAA+TGG + chr7_1:69711122-69711141 None:intergenic 30.0%
!!! TGATTTTGAAGCTTCTGAAA+TGG - chr7_1:69711259-69711278 Msa1034270:CDS 30.0%
AATGGAGAAGCTAAGTAATA+TGG - chr7_1:69711277-69711296 Msa1034270:CDS 30.0%
! GGATATTAGTTTCAGAAATG+TGG - chr7_1:69711496-69711515 Msa1034270:intron 30.0%
!! ATTTGTGTTTTTACAGGGAA+AGG - chr7_1:69711586-69711605 Msa1034270:intron 30.0%
!! TTTGTGTTTTTACAGGGAAA+GGG - chr7_1:69711587-69711606 Msa1034270:intron 30.0%
! AAACATGATAACACACCTTT+TGG + chr7_1:69711741-69711760 None:intergenic 30.0%
!!! CATAGTCTTTTTTAGGAGTT+TGG - chr7_1:69711880-69711899 Msa1034270:CDS 30.0%
ATAAAGTGGCAGAAATCATA+AGG + chr7_1:69711999-69712018 None:intergenic 30.0%
ATTAAGTGTTTGAATGGTTC+AGG - chr7_1:69712017-69712036 Msa1034270:CDS 30.0%
!! TCAACTCATTTTTAGGCTTT+TGG + chr7_1:69712286-69712305 None:intergenic 30.0%
! TCAATGTTTTCCTTTCTAAC+CGG + chr7_1:69712467-69712486 None:intergenic 30.0%
! TAAACAAATTTTGCACCATC+AGG + chr7_1:69712539-69712558 None:intergenic 30.0%
TAAAAACCTGTCTGCACAAA+AGG + chr7_1:69710343-69710362 None:intergenic 35.0%
! CACTGATTGTAAGTACAGAA+GGG + chr7_1:69710447-69710466 None:intergenic 35.0%
! TCACTGATTGTAAGTACAGA+AGG + chr7_1:69710448-69710467 None:intergenic 35.0%
! TTGTTATTGAGGTTTGAACG+TGG - chr7_1:69710549-69710568 Msa1034270:CDS 35.0%
ATCTTATGCTTATCACCTTC+AGG + chr7_1:69710607-69710626 None:intergenic 35.0%
TGAAGGTGATAAGCATAAGA+TGG - chr7_1:69710606-69710625 Msa1034270:CDS 35.0%
AGCATAAGATGGCAAAACTT+TGG - chr7_1:69710617-69710636 Msa1034270:CDS 35.0%
GCATAAGATGGCAAAACTTT+GGG - chr7_1:69710618-69710637 Msa1034270:CDS 35.0%
CATAAGATGGCAAAACTTTG+GGG - chr7_1:69710619-69710638 Msa1034270:CDS 35.0%
GATGAATCTATTGCTCAAAG+AGG - chr7_1:69710673-69710692 Msa1034270:CDS 35.0%
! TGTATGTTGTGCTACCTTTT+GGG - chr7_1:69710716-69710735 Msa1034270:CDS 35.0%
TGTGTAGTTCAAAACCCAAA+AGG + chr7_1:69710733-69710752 None:intergenic 35.0%
ACTGTTACCATACATATGCT+TGG - chr7_1:69710827-69710846 Msa1034270:CDS 35.0%
ATAAAGATCCACTCTGAACA+GGG + chr7_1:69710917-69710936 None:intergenic 35.0%
AATAAAGATCCACTCTGAAC+AGG + chr7_1:69710918-69710937 None:intergenic 35.0%
TGGATCTTTATTGTCACGTA+AGG - chr7_1:69710926-69710945 Msa1034270:intron 35.0%
CATAGTCAGGAAAAGGATAT+TGG - chr7_1:69710972-69710991 Msa1034270:intron 35.0%
GATATTGGGAAAATGCAATC+TGG - chr7_1:69710987-69711006 Msa1034270:intron 35.0%
!!! CATATGTTTTGACTGTGTAG+CGG + chr7_1:69711081-69711100 None:intergenic 35.0%
! AATTCATTGCTGGTCTGTAA+TGG + chr7_1:69711158-69711177 None:intergenic 35.0%
ATTGAACTTTAATCGAGCTG+TGG - chr7_1:69711175-69711194 Msa1034270:intron 35.0%
GTCATCAGATTCAGAATCAT+TGG + chr7_1:69711201-69711220 None:intergenic 35.0%
CTAAGTAATATGGTGCGTAA+AGG - chr7_1:69711287-69711306 Msa1034270:CDS 35.0%
GAATAGACTCACATTTCTGT+TGG + chr7_1:69711371-69711390 None:intergenic 35.0%
GTATCAATGTAGACGATTTC+TGG - chr7_1:69711475-69711494 Msa1034270:intron 35.0%
!! TCCTGCATTTGTGTTTTTAC+AGG - chr7_1:69711580-69711599 Msa1034270:intron 35.0%
!! CCTGCATTTGTGTTTTTACA+GGG - chr7_1:69711581-69711600 Msa1034270:intron 35.0%
ATTACGCTGTTAAAACCTCT+TGG - chr7_1:69711643-69711662 Msa1034270:CDS 35.0%
!! TGTGTTCTGTGTCTACTTTT+TGG - chr7_1:69711774-69711793 Msa1034270:CDS 35.0%
!!! AGTCTTTTTTAGGAGTTTGG+AGG - chr7_1:69711883-69711902 Msa1034270:CDS 35.0%
!!! GTCTTTTTTAGGAGTTTGGA+GGG - chr7_1:69711884-69711903 Msa1034270:CDS 35.0%
! TTGATTATGCTGCTTCTTGT+AGG - chr7_1:69712138-69712157 Msa1034270:intron 35.0%
GGAATTAAAGAGACGACAAA+AGG - chr7_1:69712193-69712212 Msa1034270:intron 35.0%
TAAGAATCGATGATGACTTG+AGG - chr7_1:69712234-69712253 Msa1034270:intron 35.0%
AAGAATCGATGATGACTTGA+GGG - chr7_1:69712235-69712254 Msa1034270:intron 35.0%
! TGAGGCTTATAAGCTTTATG+AGG - chr7_1:69712310-69712329 Msa1034270:CDS 35.0%
ATCTCTAAGCATCATGAGAT+GGG - chr7_1:69712362-69712381 Msa1034270:five_prime_UTR 35.0%
GATGGGATTTAAGAAAGCAA+TGG - chr7_1:69712379-69712398 Msa1034270:five_prime_UTR 35.0%
TGTTACGTACTTGAATGATC+CGG - chr7_1:69712445-69712464 Msa1034270:five_prime_UTR 35.0%
TGTGATAAGATTGATCCTGA+TGG - chr7_1:69712521-69712540 Msa1034270:five_prime_UTR 35.0%
ATAAGCCTCCATATTCAAAG+AGG - chr7_1:69712588-69712607 Msa1034270:five_prime_UTR 35.0%
TAAGCCTCCATATTCAAAGA+GGG - chr7_1:69712589-69712608 Msa1034270:five_prime_UTR 35.0%
TAAAAACCTGTCTGCACAAA+AGG + chr7_1:69710343-69710362 None:intergenic 35.0%
! CACTGATTGTAAGTACAGAA+GGG + chr7_1:69710447-69710466 None:intergenic 35.0%
! TCACTGATTGTAAGTACAGA+AGG + chr7_1:69710448-69710467 None:intergenic 35.0%
! TTGTTATTGAGGTTTGAACG+TGG - chr7_1:69710549-69710568 Msa1034270:CDS 35.0%
ATCTTATGCTTATCACCTTC+AGG + chr7_1:69710607-69710626 None:intergenic 35.0%
TGAAGGTGATAAGCATAAGA+TGG - chr7_1:69710606-69710625 Msa1034270:CDS 35.0%
AGCATAAGATGGCAAAACTT+TGG - chr7_1:69710617-69710636 Msa1034270:CDS 35.0%
GCATAAGATGGCAAAACTTT+GGG - chr7_1:69710618-69710637 Msa1034270:CDS 35.0%
CATAAGATGGCAAAACTTTG+GGG - chr7_1:69710619-69710638 Msa1034270:CDS 35.0%
GATGAATCTATTGCTCAAAG+AGG - chr7_1:69710673-69710692 Msa1034270:CDS 35.0%
! TGTATGTTGTGCTACCTTTT+GGG - chr7_1:69710716-69710735 Msa1034270:CDS 35.0%
TGTGTAGTTCAAAACCCAAA+AGG + chr7_1:69710733-69710752 None:intergenic 35.0%
ACTGTTACCATACATATGCT+TGG - chr7_1:69710827-69710846 Msa1034270:CDS 35.0%
ATAAAGATCCACTCTGAACA+GGG + chr7_1:69710917-69710936 None:intergenic 35.0%
AATAAAGATCCACTCTGAAC+AGG + chr7_1:69710918-69710937 None:intergenic 35.0%
TGGATCTTTATTGTCACGTA+AGG - chr7_1:69710926-69710945 Msa1034270:intron 35.0%
CATAGTCAGGAAAAGGATAT+TGG - chr7_1:69710972-69710991 Msa1034270:intron 35.0%
GATATTGGGAAAATGCAATC+TGG - chr7_1:69710987-69711006 Msa1034270:intron 35.0%
!!! CATATGTTTTGACTGTGTAG+CGG + chr7_1:69711081-69711100 None:intergenic 35.0%
! AATTCATTGCTGGTCTGTAA+TGG + chr7_1:69711158-69711177 None:intergenic 35.0%
ATTGAACTTTAATCGAGCTG+TGG - chr7_1:69711175-69711194 Msa1034270:intron 35.0%
GTCATCAGATTCAGAATCAT+TGG + chr7_1:69711201-69711220 None:intergenic 35.0%
CTAAGTAATATGGTGCGTAA+AGG - chr7_1:69711287-69711306 Msa1034270:CDS 35.0%
GAATAGACTCACATTTCTGT+TGG + chr7_1:69711371-69711390 None:intergenic 35.0%
GTATCAATGTAGACGATTTC+TGG - chr7_1:69711475-69711494 Msa1034270:intron 35.0%
!! TCCTGCATTTGTGTTTTTAC+AGG - chr7_1:69711580-69711599 Msa1034270:intron 35.0%
!! CCTGCATTTGTGTTTTTACA+GGG - chr7_1:69711581-69711600 Msa1034270:intron 35.0%
ATTACGCTGTTAAAACCTCT+TGG - chr7_1:69711643-69711662 Msa1034270:CDS 35.0%
!! TGTGTTCTGTGTCTACTTTT+TGG - chr7_1:69711774-69711793 Msa1034270:CDS 35.0%
!!! AGTCTTTTTTAGGAGTTTGG+AGG - chr7_1:69711883-69711902 Msa1034270:CDS 35.0%
!!! GTCTTTTTTAGGAGTTTGGA+GGG - chr7_1:69711884-69711903 Msa1034270:CDS 35.0%
! TTGATTATGCTGCTTCTTGT+AGG - chr7_1:69712138-69712157 Msa1034270:intron 35.0%
GGAATTAAAGAGACGACAAA+AGG - chr7_1:69712193-69712212 Msa1034270:intron 35.0%
TAAGAATCGATGATGACTTG+AGG - chr7_1:69712234-69712253 Msa1034270:intron 35.0%
AAGAATCGATGATGACTTGA+GGG - chr7_1:69712235-69712254 Msa1034270:intron 35.0%
! TGAGGCTTATAAGCTTTATG+AGG - chr7_1:69712310-69712329 Msa1034270:CDS 35.0%
ATCTCTAAGCATCATGAGAT+GGG - chr7_1:69712362-69712381 Msa1034270:five_prime_UTR 35.0%
GATGGGATTTAAGAAAGCAA+TGG - chr7_1:69712379-69712398 Msa1034270:five_prime_UTR 35.0%
TGTTACGTACTTGAATGATC+CGG - chr7_1:69712445-69712464 Msa1034270:five_prime_UTR 35.0%
TGTGATAAGATTGATCCTGA+TGG - chr7_1:69712521-69712540 Msa1034270:five_prime_UTR 35.0%
ATAAGCCTCCATATTCAAAG+AGG - chr7_1:69712588-69712607 Msa1034270:five_prime_UTR 35.0%
TAAGCCTCCATATTCAAAGA+GGG - chr7_1:69712589-69712608 Msa1034270:five_prime_UTR 35.0%
ACAGAAGGGATACTAATGCA+AGG + chr7_1:69710433-69710452 None:intergenic 40.0%
! CTGTATGTTGTGCTACCTTT+TGG - chr7_1:69710715-69710734 Msa1034270:CDS 40.0%
ATGGATAGCATGTCTGAATC+AGG - chr7_1:69710884-69710903 Msa1034270:intron 40.0%
TATTGTCACGTAAGGTGACT+AGG - chr7_1:69710934-69710953 Msa1034270:intron 40.0%
AGTAATATGGTGCGTAAAGG+TGG - chr7_1:69711290-69711309 Msa1034270:CDS 40.0%
AAGTTGACGCACATAGTAGT+CGG - chr7_1:69711341-69711360 Msa1034270:CDS 40.0%
CCCTGTAAAAACACAAATGC+AGG + chr7_1:69711584-69711603 None:intergenic 40.0%
GTATTGAGAACTGTTGCTCT+AGG - chr7_1:69711615-69711634 Msa1034270:CDS 40.0%
! TGTTAAAACCTCTTGGCTTG+AGG - chr7_1:69711650-69711669 Msa1034270:CDS 40.0%
AACAAGTCCATGTTCTACGA+CGG - chr7_1:69711691-69711710 Msa1034270:CDS 40.0%
!! TTTTTAGGAGTTTGGAGGGT+AGG - chr7_1:69711888-69711907 Msa1034270:CDS 40.0%
!! TTTTAGGAGTTTGGAGGGTA+GGG - chr7_1:69711889-69711908 Msa1034270:CDS 40.0%
TGGTTCAGGTCAGAAAAAGT+TGG - chr7_1:69712031-69712050 Msa1034270:CDS 40.0%
TTCAGGTCAGAAAAAGTTGG+TGG - chr7_1:69712034-69712053 Msa1034270:CDS 40.0%
AAAGAGACGACAAAAGGAGA+TGG - chr7_1:69712199-69712218 Msa1034270:intron 40.0%
GCAAAGTTAGGTCCTCTTTA+TGG - chr7_1:69712257-69712276 Msa1034270:intron 40.0%
! GGCTTTTGGTATCCATAAAG+AGG + chr7_1:69712272-69712291 None:intergenic 40.0%
! GGCTTATAAGCTTTATGAGG+AGG - chr7_1:69712313-69712332 Msa1034270:CDS 40.0%
TGAGGAGGATTGTAAGTCTA+AGG - chr7_1:69712328-69712347 Msa1034270:CDS 40.0%
GAGGAGGATTGTAAGTCTAA+GGG - chr7_1:69712329-69712348 Msa1034270:CDS 40.0%
CATCTCATGATGCTTAGAGA+TGG + chr7_1:69712363-69712382 None:intergenic 40.0%
CATCTCTAAGCATCATGAGA+TGG - chr7_1:69712361-69712380 Msa1034270:five_prime_UTR 40.0%
GGGATTTAAGAAAGCAATGG+AGG - chr7_1:69712382-69712401 Msa1034270:five_prime_UTR 40.0%
AAGAAAGCAATGGAGGAGTT+TGG - chr7_1:69712389-69712408 Msa1034270:five_prime_UTR 40.0%
CTTGAATGATCCGGTTAGAA+AGG - chr7_1:69712454-69712473 Msa1034270:five_prime_UTR 40.0%
AAACATTGAGAGCCACTTCA+AGG - chr7_1:69712478-69712497 Msa1034270:five_prime_UTR 40.0%
AACATTGAGAGCCACTTCAA+GGG - chr7_1:69712479-69712498 Msa1034270:five_prime_UTR 40.0%
TCAAAATCTTCCCCTTGAAG+TGG + chr7_1:69712493-69712512 None:intergenic 40.0%
! ACTTCAAGGGGAAGATTTTG+AGG - chr7_1:69712492-69712511 Msa1034270:five_prime_UTR 40.0%
ACAGAAGGGATACTAATGCA+AGG + chr7_1:69710433-69710452 None:intergenic 40.0%
! CTGTATGTTGTGCTACCTTT+TGG - chr7_1:69710715-69710734 Msa1034270:CDS 40.0%
ATGGATAGCATGTCTGAATC+AGG - chr7_1:69710884-69710903 Msa1034270:intron 40.0%
TATTGTCACGTAAGGTGACT+AGG - chr7_1:69710934-69710953 Msa1034270:intron 40.0%
AGTAATATGGTGCGTAAAGG+TGG - chr7_1:69711290-69711309 Msa1034270:CDS 40.0%
AAGTTGACGCACATAGTAGT+CGG - chr7_1:69711341-69711360 Msa1034270:CDS 40.0%
CCCTGTAAAAACACAAATGC+AGG + chr7_1:69711584-69711603 None:intergenic 40.0%
GTATTGAGAACTGTTGCTCT+AGG - chr7_1:69711615-69711634 Msa1034270:CDS 40.0%
! TGTTAAAACCTCTTGGCTTG+AGG - chr7_1:69711650-69711669 Msa1034270:CDS 40.0%
AACAAGTCCATGTTCTACGA+CGG - chr7_1:69711691-69711710 Msa1034270:CDS 40.0%
!! TTTTTAGGAGTTTGGAGGGT+AGG - chr7_1:69711888-69711907 Msa1034270:CDS 40.0%
!! TTTTAGGAGTTTGGAGGGTA+GGG - chr7_1:69711889-69711908 Msa1034270:CDS 40.0%
TGGTTCAGGTCAGAAAAAGT+TGG - chr7_1:69712031-69712050 Msa1034270:CDS 40.0%
TTCAGGTCAGAAAAAGTTGG+TGG - chr7_1:69712034-69712053 Msa1034270:CDS 40.0%
AAAGAGACGACAAAAGGAGA+TGG - chr7_1:69712199-69712218 Msa1034270:intron 40.0%
GCAAAGTTAGGTCCTCTTTA+TGG - chr7_1:69712257-69712276 Msa1034270:intron 40.0%
! GGCTTTTGGTATCCATAAAG+AGG + chr7_1:69712272-69712291 None:intergenic 40.0%
! GGCTTATAAGCTTTATGAGG+AGG - chr7_1:69712313-69712332 Msa1034270:CDS 40.0%
TGAGGAGGATTGTAAGTCTA+AGG - chr7_1:69712328-69712347 Msa1034270:CDS 40.0%
GAGGAGGATTGTAAGTCTAA+GGG - chr7_1:69712329-69712348 Msa1034270:CDS 40.0%
CATCTCATGATGCTTAGAGA+TGG + chr7_1:69712363-69712382 None:intergenic 40.0%
CATCTCTAAGCATCATGAGA+TGG - chr7_1:69712361-69712380 Msa1034270:five_prime_UTR 40.0%
GGGATTTAAGAAAGCAATGG+AGG - chr7_1:69712382-69712401 Msa1034270:five_prime_UTR 40.0%
AAGAAAGCAATGGAGGAGTT+TGG - chr7_1:69712389-69712408 Msa1034270:five_prime_UTR 40.0%
CTTGAATGATCCGGTTAGAA+AGG - chr7_1:69712454-69712473 Msa1034270:five_prime_UTR 40.0%
AAACATTGAGAGCCACTTCA+AGG - chr7_1:69712478-69712497 Msa1034270:five_prime_UTR 40.0%
AACATTGAGAGCCACTTCAA+GGG - chr7_1:69712479-69712498 Msa1034270:five_prime_UTR 40.0%
TCAAAATCTTCCCCTTGAAG+TGG + chr7_1:69712493-69712512 None:intergenic 40.0%
! ACTTCAAGGGGAAGATTTTG+AGG - chr7_1:69712492-69712511 Msa1034270:five_prime_UTR 40.0%
! AGTGAACCTTTTGTGCAGAC+AGG - chr7_1:69710334-69710353 Msa1034270:CDS 45.0%
CAGTCAGCCAAGCATATGTA+TGG + chr7_1:69710837-69710856 None:intergenic 45.0%
CATACATATGCTTGGCTGAC+TGG - chr7_1:69710835-69710854 Msa1034270:CDS 45.0%
ATTTGAATCTGCGGCTCTTG+AGG + chr7_1:69711018-69711037 None:intergenic 45.0%
! TCATTGCTGGTCTGTAATGG+AGG + chr7_1:69711155-69711174 None:intergenic 45.0%
! CTGAATCTGATGACGATGAC+AGG - chr7_1:69711207-69711226 Msa1034270:intron 45.0%
AATATGGTGCGTAAAGGTGG+AGG - chr7_1:69711293-69711312 Msa1034270:CDS 45.0%
AGTTGACGCACATAGTAGTC+GGG - chr7_1:69711342-69711361 Msa1034270:CDS 45.0%
!! GTGTTTTTACAGGGAAAGGG+AGG - chr7_1:69711590-69711609 Msa1034270:intron 45.0%
ATCACAATCCTCAAGCCAAG+AGG + chr7_1:69711661-69711680 None:intergenic 45.0%
!! AGGTCAGAAAAAGTTGGTGG+AGG - chr7_1:69712037-69712056 Msa1034270:CDS 45.0%
!! TGTTGACTTAGCACAAGTGC+TGG - chr7_1:69712115-69712134 Msa1034270:intron 45.0%
ACGACAAAAGGAGATGGAGA+TGG - chr7_1:69712205-69712224 Msa1034270:intron 45.0%
GATGACTTGAGGGCAAAGTT+AGG - chr7_1:69712245-69712264 Msa1034270:intron 45.0%
ACATTGAGAGCCACTTCAAG+GGG - chr7_1:69712480-69712499 Msa1034270:five_prime_UTR 45.0%
TGTGCCCTCTTTGAATATGG+AGG + chr7_1:69712596-69712615 None:intergenic 45.0%
CTCTGTGCCCTCTTTGAATA+TGG + chr7_1:69712599-69712618 None:intergenic 45.0%
! TATTCAAAGAGGGCACAGAG+TGG - chr7_1:69712599-69712618 Msa1034270:five_prime_UTR 45.0%
TAATGATCAGCCCGAAGAAC+AGG - chr7_1:69712622-69712641 Msa1034270:five_prime_UTR 45.0%
ATTGTGCACCTCCTGTTCTT+CGG + chr7_1:69712636-69712655 None:intergenic 45.0%
! AAGAACAGGAGGTGCACAAT+GGG - chr7_1:69712636-69712655 Msa1034270:five_prime_UTR 45.0%
! AGTGAACCTTTTGTGCAGAC+AGG - chr7_1:69710334-69710353 Msa1034270:CDS 45.0%
CAGTCAGCCAAGCATATGTA+TGG + chr7_1:69710837-69710856 None:intergenic 45.0%
CATACATATGCTTGGCTGAC+TGG - chr7_1:69710835-69710854 Msa1034270:CDS 45.0%
ATTTGAATCTGCGGCTCTTG+AGG + chr7_1:69711018-69711037 None:intergenic 45.0%
! TCATTGCTGGTCTGTAATGG+AGG + chr7_1:69711155-69711174 None:intergenic 45.0%
! CTGAATCTGATGACGATGAC+AGG - chr7_1:69711207-69711226 Msa1034270:intron 45.0%
AATATGGTGCGTAAAGGTGG+AGG - chr7_1:69711293-69711312 Msa1034270:CDS 45.0%
AGTTGACGCACATAGTAGTC+GGG - chr7_1:69711342-69711361 Msa1034270:CDS 45.0%
!! GTGTTTTTACAGGGAAAGGG+AGG - chr7_1:69711590-69711609 Msa1034270:intron 45.0%
ATCACAATCCTCAAGCCAAG+AGG + chr7_1:69711661-69711680 None:intergenic 45.0%
!! AGGTCAGAAAAAGTTGGTGG+AGG - chr7_1:69712037-69712056 Msa1034270:CDS 45.0%
!! TGTTGACTTAGCACAAGTGC+TGG - chr7_1:69712115-69712134 Msa1034270:intron 45.0%
ACGACAAAAGGAGATGGAGA+TGG - chr7_1:69712205-69712224 Msa1034270:intron 45.0%
GATGACTTGAGGGCAAAGTT+AGG - chr7_1:69712245-69712264 Msa1034270:intron 45.0%
ACATTGAGAGCCACTTCAAG+GGG - chr7_1:69712480-69712499 Msa1034270:five_prime_UTR 45.0%
TGTGCCCTCTTTGAATATGG+AGG + chr7_1:69712596-69712615 None:intergenic 45.0%
CTCTGTGCCCTCTTTGAATA+TGG + chr7_1:69712599-69712618 None:intergenic 45.0%
! TATTCAAAGAGGGCACAGAG+TGG - chr7_1:69712599-69712618 Msa1034270:five_prime_UTR 45.0%
TAATGATCAGCCCGAAGAAC+AGG - chr7_1:69712622-69712641 Msa1034270:five_prime_UTR 45.0%
ATTGTGCACCTCCTGTTCTT+CGG + chr7_1:69712636-69712655 None:intergenic 45.0%
! AAGAACAGGAGGTGCACAAT+GGG - chr7_1:69712636-69712655 Msa1034270:five_prime_UTR 45.0%
GACTGTTCTTACGCTCCTGA+AGG - chr7_1:69710589-69710608 Msa1034270:CDS 50.0%
CATATGCTTGGCTGACTGGT+TGG - chr7_1:69710839-69710858 Msa1034270:intron 50.0%
AGATCCACTCTGAACAGGGT+AGG + chr7_1:69710913-69710932 None:intergenic 50.0%
AGCGCAGCATAGTCAGGAAA+AGG - chr7_1:69710965-69710984 Msa1034270:intron 50.0%
!!! TGTTTTGACTGTGTAGCGGC+AGG + chr7_1:69711077-69711096 None:intergenic 50.0%
CACTGTACCGTCGTAGAACA+TGG + chr7_1:69711701-69711720 None:intergenic 50.0%
! GAGTTTGGAGGGTAGGGTTT+TGG - chr7_1:69711895-69711914 Msa1034270:CDS 50.0%
!! TTTGGAGGGTAGGGTTTTGG+AGG - chr7_1:69711898-69711917 Msa1034270:CDS 50.0%
!!! TTGGAGGGTAGGGTTTTGGA+GGG - chr7_1:69711899-69711918 Msa1034270:CDS 50.0%
!! AGTTGGTGGAGGCATCCAAT+AGG - chr7_1:69712048-69712067 Msa1034270:CDS 50.0%
TTGTGCACCTCCTGTTCTTC+GGG + chr7_1:69712635-69712654 None:intergenic 50.0%
! GAAGAACAGGAGGTGCACAA+TGG - chr7_1:69712635-69712654 Msa1034270:five_prime_UTR 50.0%
GACTGTTCTTACGCTCCTGA+AGG - chr7_1:69710589-69710608 Msa1034270:CDS 50.0%
CATATGCTTGGCTGACTGGT+TGG - chr7_1:69710839-69710858 Msa1034270:intron 50.0%
AGATCCACTCTGAACAGGGT+AGG + chr7_1:69710913-69710932 None:intergenic 50.0%
AGCGCAGCATAGTCAGGAAA+AGG - chr7_1:69710965-69710984 Msa1034270:intron 50.0%
!!! TGTTTTGACTGTGTAGCGGC+AGG + chr7_1:69711077-69711096 None:intergenic 50.0%
CACTGTACCGTCGTAGAACA+TGG + chr7_1:69711701-69711720 None:intergenic 50.0%
! GAGTTTGGAGGGTAGGGTTT+TGG - chr7_1:69711895-69711914 Msa1034270:CDS 50.0%
!! TTTGGAGGGTAGGGTTTTGG+AGG - chr7_1:69711898-69711917 Msa1034270:CDS 50.0%
!!! TTGGAGGGTAGGGTTTTGGA+GGG - chr7_1:69711899-69711918 Msa1034270:CDS 50.0%
!! AGTTGGTGGAGGCATCCAAT+AGG - chr7_1:69712048-69712067 Msa1034270:CDS 50.0%
TTGTGCACCTCCTGTTCTTC+GGG + chr7_1:69712635-69712654 None:intergenic 50.0%
! GAAGAACAGGAGGTGCACAA+TGG - chr7_1:69712635-69712654 Msa1034270:five_prime_UTR 50.0%
GAGTCCTACCCTGTTCAGAG+TGG - chr7_1:69710906-69710925 Msa1034270:intron 55.0%
CTCAACAGCGCAGCATAGTC+AGG - chr7_1:69710959-69710978 Msa1034270:intron 55.0%
GCGCGTTTGCTTCGAGATTG+AGG - chr7_1:69712172-69712191 Msa1034270:intron 55.0%
TGATCAGCCCGAAGAACAGG+AGG - chr7_1:69712625-69712644 Msa1034270:five_prime_UTR 55.0%
GAGTCCTACCCTGTTCAGAG+TGG - chr7_1:69710906-69710925 Msa1034270:intron 55.0%
CTCAACAGCGCAGCATAGTC+AGG - chr7_1:69710959-69710978 Msa1034270:intron 55.0%
GCGCGTTTGCTTCGAGATTG+AGG - chr7_1:69712172-69712191 Msa1034270:intron 55.0%
TGATCAGCCCGAAGAACAGG+AGG - chr7_1:69712625-69712644 Msa1034270:five_prime_UTR 55.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 69710292 69712688 69710292 ID=Msa1034270;Name=Msa1034270
chr7_1 mRNA 69710292 69712688 69710292 ID=Msa1034270-mRNA-1;Parent=Msa1034270;Name=Msa1034270-mRNA-1;_AED=0.17;_eAED=0.17;_QI=333|0.66|0.75|1|0.66|0.75|4|0|420
chr7_1 exon 69710292 69710854 69710292 ID=Msa1034270-mRNA-1:exon:16509;Parent=Msa1034270-mRNA-1
chr7_1 exon 69711236 69711378 69711236 ID=Msa1034270-mRNA-1:exon:16508;Parent=Msa1034270-mRNA-1
chr7_1 exon 69711602 69712088 69711602 ID=Msa1034270-mRNA-1:exon:16507;Parent=Msa1034270-mRNA-1
chr7_1 exon 69712286 69712688 69712286 ID=Msa1034270-mRNA-1:exon:16506;Parent=Msa1034270-mRNA-1
chr7_1 five_prime_UTR 69712356 69712688 69712356 ID=Msa1034270-mRNA-1:five_prime_utr;Parent=Msa1034270-mRNA-1
chr7_1 CDS 69712286 69712355 69712286 ID=Msa1034270-mRNA-1:cds;Parent=Msa1034270-mRNA-1
chr7_1 CDS 69711602 69712088 69711602 ID=Msa1034270-mRNA-1:cds;Parent=Msa1034270-mRNA-1
chr7_1 CDS 69711236 69711378 69711236 ID=Msa1034270-mRNA-1:cds;Parent=Msa1034270-mRNA-1
chr7_1 CDS 69710292 69710854 69710292 ID=Msa1034270-mRNA-1:cds;Parent=Msa1034270-mRNA-1
Gene Sequence

>Msa1034270

ATGGCAAAACTTTGGGGCCATATTAATATTGTGACAATGAAATGGTTTGATGAATCTATTGCTCAAAGAGCATGTCTGAATCAGGAGTCCTACCCTGTTCAGAGTGGATCTTTATTGTCACGTAAGGTGACTAGGAACTCAACAGCGCAGCATAGTCAGGAAAAGGATATTGGGAAAATGCAATCTGGTTCATCCTCAAGAGCCGCAGATTCAAATATACTAGTTCATTGCGCCAAGTCTTTAAATGTTGATCCTGCCGCTACACAGTCAAAACATATGTTGTCTGTTTCTAATGTTCCATTTTTTGTTAAAGAGGCAGATGCTGAAGCACCTCCATTACAGACCAGCAATGAATTGAACTTTAATCGAGCTGTGGCCAATGATTCTGAATCTGATGACGATGACAGGTATTTAGCAGATTGCAGAATATCACTTGTTGATTTTGAAGCTTCTGAAATGGAGAAGCTAAGTAATATGGTGCGTAAAGGTGGAGGCTTCCAATGCTTGTATTTAAATGATAAGTTGACGCACATAGTAGTCGGGAATCCAACAGAAATGGAAAGGGAGGATGTATTGAGAACTGTTGCTCTAGGTGTCAATTACGCTGTTAAAACCTCTTGGCTTGAGGATTGTGATCGCGAAAAAAAACAAGTCCATGTTCTACGACGGTACAGTGCATATGATATTCTTTTTCCAAAAGCACAAGTGCTGGTTGATTATGCTGCTTCTTGTAGGCTAGCTCGCACGCGCGTTTGCTTCGAGATTGAGGAATTAAAGAGACGACAAAAGGAGATGGAGATGGAATATGTAAGAATCGATGATGACTTGAGGGCAAAGTTAGGTCCTCTTTATGGATACCAAAAGCCTAAAAATGAGTTGAAGATTGAGGCTTATAAGCTTTATGAGGAGGATTGTAAGTCTAAGGGAATAGTTGCCATCTCTAAGCATCATGAGATGGGATTTAAGAAAGCAATGGAGGAGTTTGGTGACATTGCGAAAGAGAGCTGTCATCGCAACTTTGTTACGTACTTGAATGATCCGGTTAGAAAGGAAAACATTGAGAGCCACTTCAAGGGGAAGATTTTGAGGTTTTCTTGTGATAAGATTGATCCTGATGGTGCAAAATTTGTTTATAAGTTTGCGTGTGAAGTGTCTGAATCTGATAAGCCTCCATATTCAAAGAGGGCACAGAGTGGTAATGATCAGCCCGAAGAACAGGAGGTGCACAATGGGACTGCTAAGAAAATGAAATATGAACCGTGA

Protein sequence

>Msa1034270

MAKLWGHINIVTMKWFDESIAQRACLNQESYPVQSGSLLSRKVTRNSTAQHSQEKDIGKMQSGSSSRAADSNILVHCAKSLNVDPAATQSKHMLSVSNVPFFVKEADAEAPPLQTSNELNFNRAVANDSESDDDDRYLADCRISLVDFEASEMEKLSNMVRKGGGFQCLYLNDKLTHIVVGNPTEMEREDVLRTVALGVNYAVKTSWLEDCDREKKQVHVLRRYSAYDILFPKAQVLVDYAASCRLARTRVCFEIEELKRRQKEMEMEYVRIDDDLRAKLGPLYGYQKPKNELKIEAYKLYEEDCKSKGIVAISKHHEMGFKKAMEEFGDIAKESCHRNFVTYLNDPVRKENIESHFKGKILRFSCDKIDPDGAKFVYKFACEVSESDKPPYSKRAQSGNDQPEEQEVHNGTAKKMKYEP*