Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0944870 | sp|Q9M8W5|SIP11_ARATH | 54.124 | 194 | 81 | 3 | 1 | 194 | 1 | 186 | 2.48e-58 | 187 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0944870 | A0A072U772 | 96.847 | 222 | 7 | 0 | 1 | 222 | 1 | 222 | 1.55e-150 | 427 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0007470 | Msa0944870 | 0.802586 | 5.229404e-49 | -8.615850e-47 |
Msa0018070 | Msa0944870 | 0.806061 | 9.875003e-50 | -8.615850e-47 |
Msa0020390 | Msa0944870 | 0.831603 | 1.520425e-55 | -8.615850e-47 |
Msa0037540 | Msa0944870 | -0.805057 | 1.603731e-49 | -8.615850e-47 |
Msa0037590 | Msa0944870 | -0.801745 | 7.788604e-49 | -8.615850e-47 |
Msa0052400 | Msa0944870 | 0.817587 | 3.052574e-52 | -8.615850e-47 |
Msa0058300 | Msa0944870 | 0.800009 | 1.761866e-48 | -8.615850e-47 |
Msa0061500 | Msa0944870 | 0.800178 | 1.627733e-48 | -8.615850e-47 |
Msa0065950 | Msa0944870 | 0.820614 | 6.248776e-53 | -8.615850e-47 |
Msa0090570 | Msa0944870 | 0.801196 | 1.009213e-48 | -8.615850e-47 |
Msa0104700 | Msa0944870 | 0.802559 | 5.297710e-49 | -8.615850e-47 |
Msa0109590 | Msa0944870 | 0.813904 | 2.020934e-51 | -8.615850e-47 |
Msa0115190 | Msa0944870 | 0.858864 | 6.146588e-63 | -8.615850e-47 |
Msa0115270 | Msa0944870 | 0.801413 | 9.108659e-49 | -8.615850e-47 |
Msa0115390 | Msa0944870 | 0.811498 | 6.792784e-51 | -8.615850e-47 |
Msa0118540 | Msa0944870 | 0.855081 | 8.015635e-62 | -8.615850e-47 |
Msa0604290 | Msa0944870 | 0.804486 | 2.111282e-49 | -8.615850e-47 |
Msa0616240 | Msa0944870 | 0.806840 | 6.766925e-50 | -8.615850e-47 |
Msa0626850 | Msa0944870 | 0.831468 | 1.640842e-55 | -8.615850e-47 |
Msa0629240 | Msa0944870 | 0.811831 | 5.750060e-51 | -8.615850e-47 |
Msa0638540 | Msa0944870 | 0.826501 | 2.620600e-54 | -8.615850e-47 |
Msa0640940 | Msa0944870 | 0.812058 | 5.132739e-51 | -8.615850e-47 |
Msa0643320 | Msa0944870 | 0.820813 | 5.624209e-53 | -8.615850e-47 |
Msa0657870 | Msa0944870 | 0.808406 | 3.145690e-50 | -8.615850e-47 |
Msa0664490 | Msa0944870 | 0.805429 | 1.340682e-49 | -8.615850e-47 |
Msa0664970 | Msa0944870 | 0.829928 | 3.911788e-55 | -8.615850e-47 |
Msa0669720 | Msa0944870 | 0.807294 | 5.422163e-50 | -8.615850e-47 |
Msa0672480 | Msa0944870 | 0.821590 | 3.724727e-53 | -8.615850e-47 |
Msa0679360 | Msa0944870 | 0.810532 | 1.099830e-50 | -8.615850e-47 |
Msa0683140 | Msa0944870 | 0.813411 | 2.594191e-51 | -8.615850e-47 |
Msa0683600 | Msa0944870 | 0.814015 | 1.910628e-51 | -8.615850e-47 |
Msa0689780 | Msa0944870 | 0.820677 | 6.046404e-53 | -8.615850e-47 |
Msa0699570 | Msa0944870 | 0.807847 | 4.138017e-50 | -8.615850e-47 |
Msa0703660 | Msa0944870 | 0.805146 | 1.536886e-49 | -8.615850e-47 |
Msa0711150 | Msa0944870 | 0.836665 | 8.191944e-57 | -8.615850e-47 |
Msa0746170 | Msa0944870 | 0.812439 | 4.237055e-51 | -8.615850e-47 |
Msa0746210 | Msa0944870 | 0.815764 | 7.820919e-52 | -8.615850e-47 |
Msa0748070 | Msa0944870 | 0.802032 | 6.799490e-49 | -8.615850e-47 |
Msa0750850 | Msa0944870 | 0.810245 | 1.268541e-50 | -8.615850e-47 |
Msa0784860 | Msa0944870 | 0.807385 | 5.186690e-50 | -8.615850e-47 |
Msa0807370 | Msa0944870 | 0.804725 | 1.881658e-49 | -8.615850e-47 |
Msa0816730 | Msa0944870 | 0.803425 | 3.507305e-49 | -8.615850e-47 |
Msa0826150 | Msa0944870 | 0.833030 | 6.738953e-56 | -8.615850e-47 |
Msa0826760 | Msa0944870 | 0.808583 | 2.884466e-50 | -8.615850e-47 |
Msa0830230 | Msa0944870 | 0.808166 | 3.539338e-50 | -8.615850e-47 |
Msa0129190 | Msa0944870 | -0.803118 | 4.060681e-49 | -8.615850e-47 |
Msa0130720 | Msa0944870 | 0.821355 | 4.219470e-53 | -8.615850e-47 |
Msa0152560 | Msa0944870 | 0.802315 | 5.946367e-49 | -8.615850e-47 |
Msa0183850 | Msa0944870 | 0.822162 | 2.745080e-53 | -8.615850e-47 |
Msa0233380 | Msa0944870 | 0.803417 | 3.521513e-49 | -8.615850e-47 |
Msa0382370 | Msa0944870 | 0.815757 | 7.851313e-52 | -8.615850e-47 |
Msa0385490 | Msa0944870 | 0.806041 | 9.971881e-50 | -8.615850e-47 |
Msa0387370 | Msa0944870 | 0.810808 | 9.590272e-51 | -8.615850e-47 |
Msa0389210 | Msa0944870 | 0.827200 | 1.784009e-54 | -8.615850e-47 |
Msa0403770 | Msa0944870 | 0.803448 | 3.469568e-49 | -8.615850e-47 |
Msa0429950 | Msa0944870 | 0.801459 | 8.914316e-49 | -8.615850e-47 |
Msa0432160 | Msa0944870 | 0.808933 | 2.427842e-50 | -8.615850e-47 |
Msa0436920 | Msa0944870 | -0.800391 | 1.473198e-48 | -8.615850e-47 |
Msa0469620 | Msa0944870 | -0.839458 | 1.565431e-57 | -8.615850e-47 |
Msa0476680 | Msa0944870 | 0.822736 | 2.018941e-53 | -8.615850e-47 |
Msa0257500 | Msa0944870 | 0.803950 | 2.728825e-49 | -8.615850e-47 |
Msa0261360 | Msa0944870 | 0.805187 | 1.506969e-49 | -8.615850e-47 |
Msa0271360 | Msa0944870 | 0.817793 | 2.742081e-52 | -8.615850e-47 |
Msa0296790 | Msa0944870 | 0.801949 | 7.072296e-49 | -8.615850e-47 |
Msa0296820 | Msa0944870 | 0.816726 | 4.765667e-52 | -8.615850e-47 |
Msa0320430 | Msa0944870 | 0.813364 | 2.657778e-51 | -8.615850e-47 |
Msa0340690 | Msa0944870 | 0.829094 | 6.237487e-55 | -8.615850e-47 |
Msa0340710 | Msa0944870 | 0.825961 | 3.523375e-54 | -8.615850e-47 |
Msa0347750 | Msa0944870 | 0.812546 | 4.014820e-51 | -8.615850e-47 |
Msa0485680 | Msa0944870 | 0.801202 | 1.006264e-48 | -8.615850e-47 |
Msa0518170 | Msa0944870 | 0.800537 | 1.375609e-48 | -8.615850e-47 |
Msa0521010 | Msa0944870 | 0.824376 | 8.345895e-54 | -8.615850e-47 |
Msa0530100 | Msa0944870 | 0.821124 | 4.769281e-53 | -8.615850e-47 |
Msa0534900 | Msa0944870 | 0.811857 | 5.676331e-51 | -8.615850e-47 |
Msa0542560 | Msa0944870 | 0.802789 | 4.748241e-49 | -8.615850e-47 |
Msa0545080 | Msa0944870 | 0.838261 | 3.193927e-57 | -8.615850e-47 |
Msa0582280 | Msa0944870 | 0.804472 | 2.125370e-49 | -8.615850e-47 |
Msa0587030 | Msa0944870 | 0.827919 | 1.198929e-54 | -8.615850e-47 |
Msa0600450 | Msa0944870 | 0.802987 | 4.321990e-49 | -8.615850e-47 |
Msa0602370 | Msa0944870 | 0.810105 | 1.359691e-50 | -8.615850e-47 |
Msa0844110 | Msa0944870 | 0.808789 | 2.605739e-50 | -8.615850e-47 |
Msa0861470 | Msa0944870 | 0.827506 | 1.506746e-54 | -8.615850e-47 |
Msa0861570 | Msa0944870 | 0.834291 | 3.263459e-56 | -8.615850e-47 |
Msa0888260 | Msa0944870 | 0.805960 | 1.036996e-49 | -8.615850e-47 |
Msa0890550 | Msa0944870 | 0.808851 | 2.527785e-50 | -8.615850e-47 |
Msa0894710 | Msa0944870 | 0.803019 | 4.257440e-49 | -8.615850e-47 |
Msa0897200 | Msa0944870 | 0.802684 | 4.990798e-49 | -8.615850e-47 |
Msa0921420 | Msa0944870 | 0.814253 | 1.692603e-51 | -8.615850e-47 |
Msa0937330 | Msa0944870 | 0.820892 | 5.395609e-53 | -8.615850e-47 |
Msa0944610 | Msa0944870 | 0.823693 | 1.206999e-53 | -8.615850e-47 |
Msa0944830 | Msa0944870 | 0.933684 | 1.288456e-95 | -8.615850e-47 |
Msa0944870 | Msa0951400 | 0.815598 | 8.517260e-52 | -8.615850e-47 |
Msa0944870 | Msa0960390 | 0.800278 | 1.553343e-48 | -8.615850e-47 |
Msa0944870 | Msa0969370 | 0.813806 | 2.124528e-51 | -8.615850e-47 |
Msa0944870 | Msa0974630 | 0.801628 | 8.230742e-49 | -8.615850e-47 |
Msa0944870 | Msa0994370 | 0.835472 | 1.645476e-56 | -8.615850e-47 |
Msa0944870 | Msa1000930 | 0.814028 | 1.897873e-51 | -8.615850e-47 |
Msa0944870 | Msa1023180 | 0.807321 | 5.352480e-50 | -8.615850e-47 |
Msa0944870 | Msa1037420 | 0.815448 | 9.197332e-52 | -8.615850e-47 |
Msa0944870 | Msa1043050 | 0.805070 | 1.594031e-49 | -8.615850e-47 |
Msa0944870 | Msa1071320 | 0.828765 | 7.492553e-55 | -8.615850e-47 |
Msa0944870 | Msa1072900 | 0.824472 | 7.924199e-54 | -8.615850e-47 |
Msa0944870 | Msa1084500 | -0.815757 | 7.851313e-52 | -8.615850e-47 |
Msa0944870 | Msa1093100 | 0.814162 | 1.772796e-51 | -8.615850e-47 |
Msa0944870 | Msa1107190 | 0.818018 | 2.439410e-52 | -8.615850e-47 |
Msa0944870 | Msa1109090 | 0.801707 | 7.928907e-49 | -8.615850e-47 |
Msa0944870 | Msa1111870 | 0.801145 | 1.033570e-48 | -8.615850e-47 |
Msa0944870 | Msa1125790 | -0.816221 | 6.182987e-52 | -8.615850e-47 |
Msa0944870 | Msa1133230 | 0.814972 | 1.173367e-51 | -8.615850e-47 |
Msa0944870 | Msa1133250 | 0.809983 | 1.444623e-50 | -8.615850e-47 |
Msa0944870 | Msa1150710 | 0.808757 | 2.648082e-50 | -8.615850e-47 |
Msa0944870 | Msa1166090 | -0.801513 | 8.689395e-49 | -8.615850e-47 |
Msa0944870 | Msa1173300 | 0.800138 | 1.658929e-48 | -8.615850e-47 |
Msa0944870 | Msa1176360 | 0.802398 | 5.716521e-49 | -8.615850e-47 |
Msa0944870 | Msa1176710 | 0.812061 | 5.123280e-51 | -8.615850e-47 |
Msa0944870 | Msa1180500 | 0.832064 | 1.169809e-55 | -8.615850e-47 |
Msa0944870 | Msa1206270 | 0.822540 | 2.242980e-53 | -8.615850e-47 |
Msa0944870 | Msa1206290 | 0.839068 | 1.976309e-57 | -8.615850e-47 |
Msa0944870 | Msa1231840 | 0.842044 | 3.288132e-58 | -8.615850e-47 |
Msa0944870 | Msa1256810 | 0.802168 | 6.375336e-49 | -8.615850e-47 |
Msa0944870 | Msa1270660 | 0.809245 | 2.080911e-50 | -8.615850e-47 |
Msa0944870 | Msa1271130 | 0.813278 | 2.775431e-51 | -8.615850e-47 |
Msa0944870 | Msa1274560 | 0.824409 | 8.199193e-54 | -8.615850e-47 |
Msa0944870 | Msa1275110 | 0.810887 | 9.217376e-51 | -8.615850e-47 |
Msa0944870 | Msa1295330 | 0.810895 | 9.180900e-51 | -8.615850e-47 |
Msa0944870 | Msa1307600 | 0.803238 | 3.835457e-49 | -8.615850e-47 |
Msa0944870 | Msa1312520 | 0.830705 | 2.526387e-55 | -8.615850e-47 |
Msa0944870 | Msa1316360 | 0.801542 | 8.571400e-49 | -8.615850e-47 |
Msa0944870 | Msa1355890 | 0.850298 | 1.858524e-60 | -8.615850e-47 |
Msa0944870 | Msa1357800 | 0.811991 | 5.306337e-51 | -8.615850e-47 |
Msa0944870 | Msa1359270 | 0.816468 | 5.445449e-52 | -8.615850e-47 |
Msa0944870 | Msa1380220 | 0.808820 | 2.566183e-50 | -8.615850e-47 |
Msa0944870 | Msa1396400 | -0.800010 | 1.761554e-48 | -8.615850e-47 |
Msa0944870 | Msa1405220 | 0.802855 | 4.601482e-49 | -8.615850e-47 |
Msa0944870 | Msa1420270 | 0.830167 | 3.420485e-55 | -8.615850e-47 |
Msa0944870 | Msa1422810 | 0.826259 | 2.992112e-54 | -8.615850e-47 |
Msa0944870 | Msa1430130 | 0.803558 | 3.291444e-49 | -8.615850e-47 |
Msa0944870 | Msa1447890 | 0.805599 | 1.234991e-49 | -8.615850e-47 |
Msa0944870 | Msa1448630 | 0.810450 | 1.145528e-50 | -8.615850e-47 |
Msa0944870 | Msa1454450 | 0.828681 | 7.851877e-55 | -8.615850e-47 |
Msa0944870 | Msa1454570 | 0.825386 | 4.821276e-54 | -8.615850e-47 |
Msa0944870 | Msa1454950 | 0.815064 | 1.119587e-51 | -8.615850e-47 |
Msa0944870 | Msa1457160 | 0.811201 | 7.880966e-51 | -8.615850e-47 |
Msa0944870 | Msa1458090 | 0.823862 | 1.101852e-53 | -8.615850e-47 |
Msa0944870 | Msa1460320 | -0.844436 | 7.570966e-59 | -8.615850e-47 |
Msa0944870 | Msa1460750 | 0.803799 | 2.933706e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0944870 | MtrunA17_Chr6g0461681 | 92.823 | 209 | 10 | 1 | 1 | 204 | 1 | 209 | 3.67e-135 | 379 |
Msa0944870 | MtrunA17_Chr7g0252841 | 67.010 | 194 | 64 | 0 | 1 | 194 | 2 | 195 | 1.66e-82 | 246 |
Msa0944870 | MtrunA17_Chr4g0024851 | 51.309 | 191 | 87 | 2 | 5 | 194 | 4 | 189 | 2.43e-51 | 166 |
Msa0944870 | MtrunA17_Chr7g0255121 | 30.808 | 198 | 101 | 7 | 9 | 194 | 10 | 183 | 2.63e-14 | 69.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0944870 | AT3G04090.1 | 54.124 | 194 | 81 | 3 | 1 | 194 | 1 | 186 | 2.52e-59 | 187 |
Msa0944870 | AT5G18290.2 | 51.309 | 191 | 87 | 2 | 5 | 194 | 4 | 189 | 3.83e-54 | 174 |
Msa0944870 | AT5G18290.1 | 51.309 | 191 | 87 | 2 | 5 | 194 | 4 | 189 | 3.83e-54 | 174 |
Msa0944870 | AT3G56950.1 | 29.730 | 185 | 116 | 4 | 11 | 194 | 10 | 181 | 6.47e-15 | 71.6 |
Msa0944870 | AT3G56950.2 | 29.730 | 185 | 116 | 4 | 11 | 194 | 10 | 181 | 6.79e-15 | 72.0 |
Find 44 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATAGATTGACTTAAAATTT+AGG | 0.143307 | 6_3:+21907057 | None:intergenic |
CCAATCATGTGACTATATTT+TGG | 0.205285 | 6_3:+21905620 | None:intergenic |
TTCTGATACTCTTGTCTCTA+TGG | 0.239383 | 6_3:-21906590 | Msa0944870:CDS |
CCTCATGTGTTTCAGTATAC+TGG | 0.250711 | 6_3:-21905346 | Msa0944870:CDS |
ATAGATTGACTTAAAATTTA+GGG | 0.265020 | 6_3:+21907058 | None:intergenic |
TACTGCCATTGGTAATGCTT+TGG | 0.277983 | 6_3:-21906668 | Msa0944870:CDS |
CTTAAAATTTAGGGAAGTTC+CGG | 0.284367 | 6_3:+21907067 | None:intergenic |
GGCTGGTGCTAAGGCAATTA+AGG | 0.306023 | 6_3:-21905654 | Msa0944870:CDS |
TCTTTCTATGCTGCTGGTCT+TGG | 0.318211 | 6_3:-21906613 | Msa0944870:CDS |
AATGTTGTAATTATAATAAA+TGG | 0.340508 | 6_3:+21906718 | None:intergenic |
CTTCAATTTGTGACATATAA+TGG | 0.348271 | 6_3:-21906751 | Msa0944870:CDS |
TTGAAGGTTGATTTGCATAC+TGG | 0.359493 | 6_3:-21905587 | Msa0944870:CDS |
GGCTATTCGTTTCCCTGCTC+AGG | 0.361454 | 6_3:-21906569 | Msa0944870:intron |
ACTGCCATTGGTAATGCTTT+GGG | 0.373544 | 6_3:-21906667 | Msa0944870:CDS |
ATGAATCTGAACACATATTC+CGG | 0.415559 | 6_3:-21907086 | Msa0944870:five_prime_UTR |
AGTTATGTTACACAGGCATT+AGG | 0.415587 | 6_3:-21905683 | Msa0944870:intron |
GATTGGAGGACCTGCTTTGA+AGG | 0.430772 | 6_3:-21905603 | Msa0944870:CDS |
GAATATGTGTTCAGATTCAT+AGG | 0.438552 | 6_3:+21907089 | None:intergenic |
GATAGATATGAAAAGTATAT+AGG | 0.441539 | 6_3:+21907002 | None:intergenic |
AATCCAATAAAAGCAGCAAT+AGG | 0.442288 | 6_3:-21906856 | Msa0944870:CDS |
CCAAAATATAGTCACATGAT+TGG | 0.450400 | 6_3:-21905620 | Msa0944870:CDS |
AATGCTTCTTTCTATGCTGC+TGG | 0.462327 | 6_3:-21906619 | Msa0944870:CDS |
ACTAGGATAGGATTCATTGA+TGG | 0.482882 | 6_3:+21905416 | None:intergenic |
GATAGGATTCATTGATGGTC+CGG | 0.492962 | 6_3:+21905421 | None:intergenic |
AGAAAGAAGCATTTCCTGTA+GGG | 0.496577 | 6_3:+21906629 | None:intergenic |
AGGTGCAGTGGCTGGTGCTA+AGG | 0.499134 | 6_3:-21905663 | Msa0944870:CDS |
AATGAATCACTTACTAGGAT+AGG | 0.501347 | 6_3:+21905404 | None:intergenic |
ATGTTTATATCTTCAACACT+TGG | 0.520569 | 6_3:-21906808 | Msa0944870:CDS |
GGTGCAAGTTTCAACCCTAC+AGG | 0.540289 | 6_3:-21906643 | Msa0944870:CDS |
TGCAAATCAACCTTCAAAGC+AGG | 0.540861 | 6_3:+21905593 | None:intergenic |
TAGAAAGAAGCATTTCCTGT+AGG | 0.555948 | 6_3:+21906628 | None:intergenic |
AATCATAGCTACGGTCGACA+CGG | 0.578906 | 6_3:+21905463 | None:intergenic |
CAGGCATTAGGTGCAGTGGC+TGG | 0.583997 | 6_3:-21905671 | Msa0944870:CDS |
CATACTGGAGCTATTGCAGA+AGG | 0.585895 | 6_3:-21905572 | Msa0944870:CDS |
GTTCTCTTCATCTTGCTCAG+AGG | 0.586421 | 6_3:-21905521 | Msa0944870:CDS |
AAATATAGTCACATGATTGG+AGG | 0.596252 | 6_3:-21905617 | Msa0944870:CDS |
GCCATTGGTAATGCTTTGGG+TGG | 0.600500 | 6_3:-21906664 | Msa0944870:CDS |
TACACAGGCATTAGGTGCAG+TGG | 0.609819 | 6_3:-21905675 | Msa0944870:intron |
ACCGATGAGAATCATAGCTA+CGG | 0.619659 | 6_3:+21905454 | None:intergenic |
ACCGTAGCTATGATTCTCAT+CGG | 0.620550 | 6_3:-21905455 | Msa0944870:CDS |
CTCATCGGTTCTGCTTACAC+CGG | 0.636201 | 6_3:-21905440 | Msa0944870:CDS |
CCAGTATACTGAAACACATG+AGG | 0.664351 | 6_3:+21905346 | None:intergenic |
ACCACCCAAAGCATTACCAA+TGG | 0.682828 | 6_3:+21906663 | None:intergenic |
GTCTTCATGAACTCACTACG+AGG | 0.738023 | 6_3:+21905497 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATGTTGTAATTATAATAAA+TGG | + | chr6_3:21905701-21905720 | None:intergenic | 10.0% |
!!! | GTCTTTTTATTTTTTATTTT+TGG | - | chr6_3:21905890-21905909 | Msa0944870:intron | 10.0% |
!!! | TATTTTTTATTTTTGGATTT+TGG | - | chr6_3:21905897-21905916 | Msa0944870:intron | 10.0% |
!!! | AAGTAATATATTTTCTATAA+GGG | + | chr6_3:21906454-21906473 | None:intergenic | 10.0% |
!! | AATGTTGTAATTATAATAAA+TGG | + | chr6_3:21905701-21905720 | None:intergenic | 10.0% |
!!! | GTCTTTTTATTTTTTATTTT+TGG | - | chr6_3:21905890-21905909 | Msa0944870:intron | 10.0% |
!!! | TATTTTTTATTTTTGGATTT+TGG | - | chr6_3:21905897-21905916 | Msa0944870:intron | 10.0% |
!!! | AAGTAATATATTTTCTATAA+GGG | + | chr6_3:21906454-21906473 | None:intergenic | 10.0% |
!!! | ATAGATTGACTTAAAATTTA+GGG | + | chr6_3:21905361-21905380 | None:intergenic | 15.0% |
!!! | AGGTTTTTATTTATTTCAAA+AGG | - | chr6_3:21905867-21905886 | Msa0944870:intron | 15.0% |
!!! | GGTTTTTATTTATTTCAAAA+GGG | - | chr6_3:21905868-21905887 | Msa0944870:intron | 15.0% |
!!! | ATTTTAGATGATTTATGTTA+AGG | - | chr6_3:21905926-21905945 | Msa0944870:intron | 15.0% |
!!! | CAAGTAATATATTTTCTATA+AGG | + | chr6_3:21906455-21906474 | None:intergenic | 15.0% |
!! | CTTATAGAAAATATATTACT+TGG | - | chr6_3:21906453-21906472 | Msa0944870:intron | 15.0% |
!!! | ATAGATTGACTTAAAATTTA+GGG | + | chr6_3:21905361-21905380 | None:intergenic | 15.0% |
!!! | AGGTTTTTATTTATTTCAAA+AGG | - | chr6_3:21905867-21905886 | Msa0944870:intron | 15.0% |
!!! | GGTTTTTATTTATTTCAAAA+GGG | - | chr6_3:21905868-21905887 | Msa0944870:intron | 15.0% |
!!! | ATTTTAGATGATTTATGTTA+AGG | - | chr6_3:21905926-21905945 | Msa0944870:intron | 15.0% |
!!! | CAAGTAATATATTTTCTATA+AGG | + | chr6_3:21906455-21906474 | None:intergenic | 15.0% |
!! | CTTATAGAAAATATATTACT+TGG | - | chr6_3:21906453-21906472 | Msa0944870:intron | 15.0% |
!!! | GATAGATTGACTTAAAATTT+AGG | + | chr6_3:21905362-21905381 | None:intergenic | 20.0% |
!!! | GATAGATATGAAAAGTATAT+AGG | + | chr6_3:21905417-21905436 | None:intergenic | 20.0% |
!!! | GTTTGTGAATTTTTTTACTA+TGG | + | chr6_3:21905476-21905495 | None:intergenic | 20.0% |
!! | AGATAGAAGAGAAAAAAAAA+TGG | - | chr6_3:21905535-21905554 | Msa0944870:CDS | 20.0% |
!!! | GTCAAAATTATTACTTTTGT+CGG | - | chr6_3:21906382-21906401 | Msa0944870:intron | 20.0% |
!!! | GATAGATTGACTTAAAATTT+AGG | + | chr6_3:21905362-21905381 | None:intergenic | 20.0% |
!!! | GATAGATATGAAAAGTATAT+AGG | + | chr6_3:21905417-21905436 | None:intergenic | 20.0% |
!!! | GTTTGTGAATTTTTTTACTA+TGG | + | chr6_3:21905476-21905495 | None:intergenic | 20.0% |
!! | AGATAGAAGAGAAAAAAAAA+TGG | - | chr6_3:21905535-21905554 | Msa0944870:CDS | 20.0% |
!!! | GTCAAAATTATTACTTTTGT+CGG | - | chr6_3:21906382-21906401 | Msa0944870:intron | 20.0% |
!!! | ATTTTGTGTTGACTTTTACA+TGG | - | chr6_3:21905585-21905604 | Msa0944870:CDS | 25.0% |
! | ATGTTTATATCTTCAACACT+TGG | - | chr6_3:21905608-21905627 | Msa0944870:CDS | 25.0% |
! | CTTCAATTTGTGACATATAA+TGG | - | chr6_3:21905665-21905684 | Msa0944870:CDS | 25.0% |
! | AATAAATAAAAACCTGAGCA+GGG | + | chr6_3:21905862-21905881 | None:intergenic | 25.0% |
! | AAATAAATAAAAACCTGAGC+AGG | + | chr6_3:21905863-21905882 | None:intergenic | 25.0% |
! | ATTATTACTACTGTTGTATC+CGG | - | chr6_3:21906034-21906053 | Msa0944870:intron | 25.0% |
!! | TGTAGTTTTTGTCAAAATCA+CGG | - | chr6_3:21906147-21906166 | Msa0944870:intron | 25.0% |
! | TATAACATTAAGTGCATGTT+TGG | + | chr6_3:21906208-21906227 | None:intergenic | 25.0% |
!!! | ACTTAATGTTATAGCCTTAT+AGG | - | chr6_3:21906215-21906234 | Msa0944870:intron | 25.0% |
! | GAAAAAATGAATCACTTACT+AGG | + | chr6_3:21907020-21907039 | None:intergenic | 25.0% |
! | ACCAATGATAACATGAAAAA+CGG | + | chr6_3:21907048-21907067 | None:intergenic | 25.0% |
!!! | ATTTTGTGTTGACTTTTACA+TGG | - | chr6_3:21905585-21905604 | Msa0944870:CDS | 25.0% |
! | ATGTTTATATCTTCAACACT+TGG | - | chr6_3:21905608-21905627 | Msa0944870:CDS | 25.0% |
! | CTTCAATTTGTGACATATAA+TGG | - | chr6_3:21905665-21905684 | Msa0944870:CDS | 25.0% |
! | AATAAATAAAAACCTGAGCA+GGG | + | chr6_3:21905862-21905881 | None:intergenic | 25.0% |
! | AAATAAATAAAAACCTGAGC+AGG | + | chr6_3:21905863-21905882 | None:intergenic | 25.0% |
! | ATTATTACTACTGTTGTATC+CGG | - | chr6_3:21906034-21906053 | Msa0944870:intron | 25.0% |
!! | TGTAGTTTTTGTCAAAATCA+CGG | - | chr6_3:21906147-21906166 | Msa0944870:intron | 25.0% |
! | TATAACATTAAGTGCATGTT+TGG | + | chr6_3:21906208-21906227 | None:intergenic | 25.0% |
!!! | ACTTAATGTTATAGCCTTAT+AGG | - | chr6_3:21906215-21906234 | Msa0944870:intron | 25.0% |
! | GAAAAAATGAATCACTTACT+AGG | + | chr6_3:21907020-21907039 | None:intergenic | 25.0% |
! | ACCAATGATAACATGAAAAA+CGG | + | chr6_3:21907048-21907067 | None:intergenic | 25.0% |
GAATATGTGTTCAGATTCAT+AGG | + | chr6_3:21905330-21905349 | None:intergenic | 30.0% | |
ATGAATCTGAACACATATTC+CGG | - | chr6_3:21905330-21905349 | Msa0944870:exon | 30.0% | |
CTTAAAATTTAGGGAAGTTC+CGG | + | chr6_3:21905352-21905371 | None:intergenic | 30.0% | |
AATCCAATAAAAGCAGCAAT+AGG | - | chr6_3:21905560-21905579 | Msa0944870:CDS | 30.0% | |
!! | ATCTTTACTTTTACTGCCAT+TGG | - | chr6_3:21905737-21905756 | Msa0944870:intron | 30.0% |
GTTTGGATTCACAATGAATT+TGG | + | chr6_3:21906191-21906210 | None:intergenic | 30.0% | |
TGGCTTAGTGAAATTATGTT+AGG | - | chr6_3:21906260-21906279 | Msa0944870:intron | 30.0% | |
!! | TAATTTTGACGTGTCTGTAT+CGG | + | chr6_3:21906372-21906391 | None:intergenic | 30.0% |
ATATGACAATTGTAGTTGCA+GGG | - | chr6_3:21906617-21906636 | Msa0944870:CDS | 30.0% | |
ATTAACGAGTTATGTTACAC+AGG | - | chr6_3:21906726-21906745 | Msa0944870:CDS | 30.0% | |
!! | ATCATGTGACTATATTTTGG+TGG | + | chr6_3:21906796-21906815 | None:intergenic | 30.0% |
! | CCAATCATGTGACTATATTT+TGG | + | chr6_3:21906799-21906818 | None:intergenic | 30.0% |
CCAAAATATAGTCACATGAT+TGG | - | chr6_3:21906796-21906815 | Msa0944870:CDS | 30.0% | |
AAATATAGTCACATGATTGG+AGG | - | chr6_3:21906799-21906818 | Msa0944870:CDS | 30.0% | |
AATGAATCACTTACTAGGAT+AGG | + | chr6_3:21907015-21907034 | None:intergenic | 30.0% | |
GAATATGTGTTCAGATTCAT+AGG | + | chr6_3:21905330-21905349 | None:intergenic | 30.0% | |
ATGAATCTGAACACATATTC+CGG | - | chr6_3:21905330-21905349 | Msa0944870:exon | 30.0% | |
CTTAAAATTTAGGGAAGTTC+CGG | + | chr6_3:21905352-21905371 | None:intergenic | 30.0% | |
AATCCAATAAAAGCAGCAAT+AGG | - | chr6_3:21905560-21905579 | Msa0944870:CDS | 30.0% | |
!! | ATCTTTACTTTTACTGCCAT+TGG | - | chr6_3:21905737-21905756 | Msa0944870:intron | 30.0% |
GTTTGGATTCACAATGAATT+TGG | + | chr6_3:21906191-21906210 | None:intergenic | 30.0% | |
TGGCTTAGTGAAATTATGTT+AGG | - | chr6_3:21906260-21906279 | Msa0944870:intron | 30.0% | |
!! | TAATTTTGACGTGTCTGTAT+CGG | + | chr6_3:21906372-21906391 | None:intergenic | 30.0% |
ATATGACAATTGTAGTTGCA+GGG | - | chr6_3:21906617-21906636 | Msa0944870:CDS | 30.0% | |
ATTAACGAGTTATGTTACAC+AGG | - | chr6_3:21906726-21906745 | Msa0944870:CDS | 30.0% | |
!! | ATCATGTGACTATATTTTGG+TGG | + | chr6_3:21906796-21906815 | None:intergenic | 30.0% |
! | CCAATCATGTGACTATATTT+TGG | + | chr6_3:21906799-21906818 | None:intergenic | 30.0% |
CCAAAATATAGTCACATGAT+TGG | - | chr6_3:21906796-21906815 | Msa0944870:CDS | 30.0% | |
AAATATAGTCACATGATTGG+AGG | - | chr6_3:21906799-21906818 | Msa0944870:CDS | 30.0% | |
AATGAATCACTTACTAGGAT+AGG | + | chr6_3:21907015-21907034 | None:intergenic | 30.0% | |
!!! | TCTCCTATTGCTGCTTTTAT+TGG | + | chr6_3:21905566-21905585 | None:intergenic | 35.0% |
!! | AGAAAGAAGCATTTCCTGTA+GGG | + | chr6_3:21905790-21905809 | None:intergenic | 35.0% |
!! | TAGAAAGAAGCATTTCCTGT+AGG | + | chr6_3:21905791-21905810 | None:intergenic | 35.0% |
TTCTGATACTCTTGTCTCTA+TGG | - | chr6_3:21905826-21905845 | Msa0944870:intron | 35.0% | |
TGTTAAGGTGAGTTTCGTAT+CGG | - | chr6_3:21905941-21905960 | Msa0944870:intron | 35.0% | |
TCGATGAAATAACGATGACA+CGG | - | chr6_3:21906097-21906116 | Msa0944870:intron | 35.0% | |
GGTTTGACAACATACCTATA+AGG | + | chr6_3:21906232-21906251 | None:intergenic | 35.0% | |
GCACATACACTTATGATTGA+AGG | - | chr6_3:21906334-21906353 | Msa0944870:intron | 35.0% | |
! | GCAAAATTTCAGGTCAACAT+AGG | + | chr6_3:21906564-21906583 | None:intergenic | 35.0% |
! | CTTGATGACTGCAAAATTTC+AGG | + | chr6_3:21906574-21906593 | None:intergenic | 35.0% |
CTGCAACTACAATTGTCATA+TGG | + | chr6_3:21906618-21906637 | None:intergenic | 35.0% | |
CATATGACAATTGTAGTTGC+AGG | - | chr6_3:21906616-21906635 | Msa0944870:CDS | 35.0% | |
AGTTATGTTACACAGGCATT+AGG | - | chr6_3:21906733-21906752 | Msa0944870:CDS | 35.0% | |
!! | TTGAAGGTTGATTTGCATAC+TGG | - | chr6_3:21906829-21906848 | Msa0944870:CDS | 35.0% |
ACTAGGATAGGATTCATTGA+TGG | + | chr6_3:21907003-21907022 | None:intergenic | 35.0% | |
!!! | GCCGTTTTTCATGTTATCAT+TGG | - | chr6_3:21907044-21907063 | Msa0944870:five_prime_UTR | 35.0% |
!!! | TCTCCTATTGCTGCTTTTAT+TGG | + | chr6_3:21905566-21905585 | None:intergenic | 35.0% |
!! | AGAAAGAAGCATTTCCTGTA+GGG | + | chr6_3:21905790-21905809 | None:intergenic | 35.0% |
!! | TAGAAAGAAGCATTTCCTGT+AGG | + | chr6_3:21905791-21905810 | None:intergenic | 35.0% |
TTCTGATACTCTTGTCTCTA+TGG | - | chr6_3:21905826-21905845 | Msa0944870:intron | 35.0% | |
TGTTAAGGTGAGTTTCGTAT+CGG | - | chr6_3:21905941-21905960 | Msa0944870:intron | 35.0% | |
TCGATGAAATAACGATGACA+CGG | - | chr6_3:21906097-21906116 | Msa0944870:intron | 35.0% | |
GGTTTGACAACATACCTATA+AGG | + | chr6_3:21906232-21906251 | None:intergenic | 35.0% | |
GCACATACACTTATGATTGA+AGG | - | chr6_3:21906334-21906353 | Msa0944870:intron | 35.0% | |
! | GCAAAATTTCAGGTCAACAT+AGG | + | chr6_3:21906564-21906583 | None:intergenic | 35.0% |
! | CTTGATGACTGCAAAATTTC+AGG | + | chr6_3:21906574-21906593 | None:intergenic | 35.0% |
CTGCAACTACAATTGTCATA+TGG | + | chr6_3:21906618-21906637 | None:intergenic | 35.0% | |
CATATGACAATTGTAGTTGC+AGG | - | chr6_3:21906616-21906635 | Msa0944870:CDS | 35.0% | |
AGTTATGTTACACAGGCATT+AGG | - | chr6_3:21906733-21906752 | Msa0944870:CDS | 35.0% | |
!! | TTGAAGGTTGATTTGCATAC+TGG | - | chr6_3:21906829-21906848 | Msa0944870:CDS | 35.0% |
ACTAGGATAGGATTCATTGA+TGG | + | chr6_3:21907003-21907022 | None:intergenic | 35.0% | |
!!! | GCCGTTTTTCATGTTATCAT+TGG | - | chr6_3:21907044-21907063 | Msa0944870:five_prime_UTR | 35.0% |
!! | TACTGCCATTGGTAATGCTT+TGG | - | chr6_3:21905748-21905767 | Msa0944870:intron | 40.0% |
!! | ACTGCCATTGGTAATGCTTT+GGG | - | chr6_3:21905749-21905768 | Msa0944870:intron | 40.0% |
AATGCTTCTTTCTATGCTGC+TGG | - | chr6_3:21905797-21905816 | Msa0944870:intron | 40.0% | |
TATGTGTTTGCATCTGACAC+CGG | - | chr6_3:21905965-21905984 | Msa0944870:intron | 40.0% | |
GGTATGTTGTCAAACCCAAT+AGG | - | chr6_3:21906236-21906255 | Msa0944870:intron | 40.0% | |
TTTCACTAAGCCAGCCTATT+GGG | + | chr6_3:21906253-21906272 | None:intergenic | 40.0% | |
ATTTCACTAAGCCAGCCTAT+TGG | + | chr6_3:21906254-21906273 | None:intergenic | 40.0% | |
! | CTTATGATTGAAGGCGTGTT+CGG | - | chr6_3:21906343-21906362 | Msa0944870:intron | 40.0% |
!! | ATTACTTTTGTCGGCATGTC+TGG | - | chr6_3:21906391-21906410 | Msa0944870:intron | 40.0% |
TCATATCCTTCTTGCTCTCT+CGG | - | chr6_3:21906483-21906502 | Msa0944870:intron | 40.0% | |
GAGGATACACGTAGATTTCA+TGG | - | chr6_3:21906529-21906548 | Msa0944870:intron | 40.0% | |
!! | GCTTAACTTGTGACTTGTGT+TGG | - | chr6_3:21906639-21906658 | Msa0944870:CDS | 40.0% |
TGCAAATCAACCTTCAAAGC+AGG | + | chr6_3:21906826-21906845 | None:intergenic | 40.0% | |
ACCGTAGCTATGATTCTCAT+CGG | - | chr6_3:21906961-21906980 | Msa0944870:five_prime_UTR | 40.0% | |
ACCGATGAGAATCATAGCTA+CGG | + | chr6_3:21906965-21906984 | None:intergenic | 40.0% | |
! | GATAGGATTCATTGATGGTC+CGG | + | chr6_3:21906998-21907017 | None:intergenic | 40.0% |
CCAGTATACTGAAACACATG+AGG | + | chr6_3:21907073-21907092 | None:intergenic | 40.0% | |
CCTCATGTGTTTCAGTATAC+TGG | - | chr6_3:21907070-21907089 | Msa0944870:five_prime_UTR | 40.0% | |
!! | TACTGCCATTGGTAATGCTT+TGG | - | chr6_3:21905748-21905767 | Msa0944870:intron | 40.0% |
!! | ACTGCCATTGGTAATGCTTT+GGG | - | chr6_3:21905749-21905768 | Msa0944870:intron | 40.0% |
AATGCTTCTTTCTATGCTGC+TGG | - | chr6_3:21905797-21905816 | Msa0944870:intron | 40.0% | |
TATGTGTTTGCATCTGACAC+CGG | - | chr6_3:21905965-21905984 | Msa0944870:intron | 40.0% | |
GGTATGTTGTCAAACCCAAT+AGG | - | chr6_3:21906236-21906255 | Msa0944870:intron | 40.0% | |
TTTCACTAAGCCAGCCTATT+GGG | + | chr6_3:21906253-21906272 | None:intergenic | 40.0% | |
ATTTCACTAAGCCAGCCTAT+TGG | + | chr6_3:21906254-21906273 | None:intergenic | 40.0% | |
! | CTTATGATTGAAGGCGTGTT+CGG | - | chr6_3:21906343-21906362 | Msa0944870:intron | 40.0% |
!! | ATTACTTTTGTCGGCATGTC+TGG | - | chr6_3:21906391-21906410 | Msa0944870:intron | 40.0% |
TCATATCCTTCTTGCTCTCT+CGG | - | chr6_3:21906483-21906502 | Msa0944870:intron | 40.0% | |
GAGGATACACGTAGATTTCA+TGG | - | chr6_3:21906529-21906548 | Msa0944870:intron | 40.0% | |
!! | GCTTAACTTGTGACTTGTGT+TGG | - | chr6_3:21906639-21906658 | Msa0944870:CDS | 40.0% |
TGCAAATCAACCTTCAAAGC+AGG | + | chr6_3:21906826-21906845 | None:intergenic | 40.0% | |
ACCGTAGCTATGATTCTCAT+CGG | - | chr6_3:21906961-21906980 | Msa0944870:five_prime_UTR | 40.0% | |
ACCGATGAGAATCATAGCTA+CGG | + | chr6_3:21906965-21906984 | None:intergenic | 40.0% | |
! | GATAGGATTCATTGATGGTC+CGG | + | chr6_3:21906998-21907017 | None:intergenic | 40.0% |
CCAGTATACTGAAACACATG+AGG | + | chr6_3:21907073-21907092 | None:intergenic | 40.0% | |
CCTCATGTGTTTCAGTATAC+TGG | - | chr6_3:21907070-21907089 | Msa0944870:five_prime_UTR | 40.0% | |
! | ACCACCCAAAGCATTACCAA+TGG | + | chr6_3:21905756-21905775 | None:intergenic | 45.0% |
! | TCTTTCTATGCTGCTGGTCT+TGG | - | chr6_3:21905803-21905822 | Msa0944870:intron | 45.0% |
AACTGACACGACATAGACAC+CGG | + | chr6_3:21906056-21906075 | None:intergenic | 45.0% | |
TGTTGTCAAACCCAATAGGC+TGG | - | chr6_3:21906240-21906259 | Msa0944870:intron | 45.0% | |
TCTGCAATCCAGATCGAGAT+TGG | + | chr6_3:21906511-21906530 | None:intergenic | 45.0% | |
AATCTCGATCTGGATTGCAG+AGG | - | chr6_3:21906510-21906529 | Msa0944870:intron | 45.0% | |
CATACTGGAGCTATTGCAGA+AGG | - | chr6_3:21906844-21906863 | Msa0944870:CDS | 45.0% | |
GTTCTCTTCATCTTGCTCAG+AGG | - | chr6_3:21906895-21906914 | Msa0944870:five_prime_UTR | 45.0% | |
GTCTTCATGAACTCACTACG+AGG | + | chr6_3:21906922-21906941 | None:intergenic | 45.0% | |
AATCATAGCTACGGTCGACA+CGG | + | chr6_3:21906956-21906975 | None:intergenic | 45.0% | |
! | ACCACCCAAAGCATTACCAA+TGG | + | chr6_3:21905756-21905775 | None:intergenic | 45.0% |
! | TCTTTCTATGCTGCTGGTCT+TGG | - | chr6_3:21905803-21905822 | Msa0944870:intron | 45.0% |
AACTGACACGACATAGACAC+CGG | + | chr6_3:21906056-21906075 | None:intergenic | 45.0% | |
TGTTGTCAAACCCAATAGGC+TGG | - | chr6_3:21906240-21906259 | Msa0944870:intron | 45.0% | |
TCTGCAATCCAGATCGAGAT+TGG | + | chr6_3:21906511-21906530 | None:intergenic | 45.0% | |
AATCTCGATCTGGATTGCAG+AGG | - | chr6_3:21906510-21906529 | Msa0944870:intron | 45.0% | |
CATACTGGAGCTATTGCAGA+AGG | - | chr6_3:21906844-21906863 | Msa0944870:CDS | 45.0% | |
GTTCTCTTCATCTTGCTCAG+AGG | - | chr6_3:21906895-21906914 | Msa0944870:five_prime_UTR | 45.0% | |
GTCTTCATGAACTCACTACG+AGG | + | chr6_3:21906922-21906941 | None:intergenic | 45.0% | |
AATCATAGCTACGGTCGACA+CGG | + | chr6_3:21906956-21906975 | None:intergenic | 45.0% | |
!! | GCCATTGGTAATGCTTTGGG+TGG | - | chr6_3:21905752-21905771 | Msa0944870:intron | 50.0% |
GGTGCAAGTTTCAACCCTAC+AGG | - | chr6_3:21905773-21905792 | Msa0944870:intron | 50.0% | |
CACATGTATCAGTGTCGTGC+CGG | + | chr6_3:21905987-21906006 | None:intergenic | 50.0% | |
TTGGAACCGAGAGAGCAAGA+AGG | + | chr6_3:21906492-21906511 | None:intergenic | 50.0% | |
TCTCGGTTCCAATCTCGATC+TGG | - | chr6_3:21906500-21906519 | Msa0944870:intron | 50.0% | |
TACACAGGCATTAGGTGCAG+TGG | - | chr6_3:21906741-21906760 | Msa0944870:CDS | 50.0% | |
! | GGCTGGTGCTAAGGCAATTA+AGG | - | chr6_3:21906762-21906781 | Msa0944870:CDS | 50.0% |
GATTGGAGGACCTGCTTTGA+AGG | - | chr6_3:21906813-21906832 | Msa0944870:CDS | 50.0% | |
!! | CTCATCGGTTCTGCTTACAC+CGG | - | chr6_3:21906976-21906995 | Msa0944870:five_prime_UTR | 50.0% |
!! | GCCATTGGTAATGCTTTGGG+TGG | - | chr6_3:21905752-21905771 | Msa0944870:intron | 50.0% |
GGTGCAAGTTTCAACCCTAC+AGG | - | chr6_3:21905773-21905792 | Msa0944870:intron | 50.0% | |
CACATGTATCAGTGTCGTGC+CGG | + | chr6_3:21905987-21906006 | None:intergenic | 50.0% | |
TTGGAACCGAGAGAGCAAGA+AGG | + | chr6_3:21906492-21906511 | None:intergenic | 50.0% | |
TCTCGGTTCCAATCTCGATC+TGG | - | chr6_3:21906500-21906519 | Msa0944870:intron | 50.0% | |
TACACAGGCATTAGGTGCAG+TGG | - | chr6_3:21906741-21906760 | Msa0944870:CDS | 50.0% | |
! | GGCTGGTGCTAAGGCAATTA+AGG | - | chr6_3:21906762-21906781 | Msa0944870:CDS | 50.0% |
GATTGGAGGACCTGCTTTGA+AGG | - | chr6_3:21906813-21906832 | Msa0944870:CDS | 50.0% | |
!! | CTCATCGGTTCTGCTTACAC+CGG | - | chr6_3:21906976-21906995 | Msa0944870:five_prime_UTR | 50.0% |
GGCTATTCGTTTCCCTGCTC+AGG | - | chr6_3:21905847-21905866 | Msa0944870:intron | 55.0% | |
GGCTATTCGTTTCCCTGCTC+AGG | - | chr6_3:21905847-21905866 | Msa0944870:intron | 55.0% | |
CAGGCATTAGGTGCAGTGGC+TGG | - | chr6_3:21906745-21906764 | Msa0944870:CDS | 60.0% | |
! | AGGTGCAGTGGCTGGTGCTA+AGG | - | chr6_3:21906753-21906772 | Msa0944870:CDS | 60.0% |
CAGGCATTAGGTGCAGTGGC+TGG | - | chr6_3:21906745-21906764 | Msa0944870:CDS | 60.0% | |
! | AGGTGCAGTGGCTGGTGCTA+AGG | - | chr6_3:21906753-21906772 | Msa0944870:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_3 | gene | 21905317 | 21907121 | 21905317 | ID=Msa0944870;Name=Msa0944870 |
chr6_3 | mRNA | 21905317 | 21907121 | 21905317 | ID=Msa0944870-mRNA-1;Parent=Msa0944870;Name=Msa0944870-mRNA-1;_AED=0.15;_eAED=0.15;_QI=237|1|1|1|1|1|2|20|222 |
chr6_3 | exon | 21905317 | 21905690 | 21905317 | ID=Msa0944870-mRNA-1:exon:6538;Parent=Msa0944870-mRNA-1 |
chr6_3 | exon | 21906570 | 21907121 | 21906570 | ID=Msa0944870-mRNA-1:exon:6537;Parent=Msa0944870-mRNA-1 |
chr6_3 | five_prime_UTR | 21906885 | 21907121 | 21906885 | ID=Msa0944870-mRNA-1:five_prime_utr;Parent=Msa0944870-mRNA-1 |
chr6_3 | CDS | 21906570 | 21906884 | 21906570 | ID=Msa0944870-mRNA-1:cds;Parent=Msa0944870-mRNA-1 |
chr6_3 | CDS | 21905337 | 21905690 | 21905337 | ID=Msa0944870-mRNA-1:cds;Parent=Msa0944870-mRNA-1 |
chr6_3 | three_prime_UTR | 21905317 | 21905336 | 21905317 | ID=Msa0944870-mRNA-1:three_prime_utr;Parent=Msa0944870-mRNA-1 |
Gene Sequence |
Protein sequence |