AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0096830


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0096830 MtrunA17_Chr1g0167421 81.043 422 14 5 1 361 1 417 0.0 663
Msa0096830 MtrunA17_Chr8g0380261 49.065 214 99 5 66 276 48 254 1.60e-63 207
Msa0096830 MtrunA17_Chr4g0005881 83.929 56 6 1 180 235 21 73 3.05e-28 105
Msa0096830 MtrunA17_Chr7g0274071 26.689 296 157 12 62 354 18 256 1.65e-14 73.9
Msa0096830 MtrunA17_Chr7g0274061 28.514 249 134 11 62 306 16 224 4.42e-13 69.7
Msa0096830 MtrunA17_Chr7g0274041 27.189 217 118 7 61 275 11 189 1.54e-12 67.8
Msa0096830 MtrunA17_Chr1g0204651 26.007 273 144 13 61 326 9 230 3.02e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0096830 AT1G04420.1 64.267 389 74 7 33 361 29 412 3.38e-169 478
Msa0096830 AT1G10810.2 26.923 260 143 11 61 317 11 226 1.31e-11 64.7
Msa0096830 AT1G60690.1 28.111 217 115 9 61 275 11 188 4.23e-11 63.9

Find 80 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCCAATTTCTTTCAAATT+TGG 0.076575 1_3:+2554984 Msa0096830:three_prime_UTR
TTCCCAAATTTGAAAGAAAT+TGG 0.168927 1_3:-2554987 None:intergenic
CCTTGTGTCTCTTTCTTCAT+TGG 0.197248 1_3:-2552032 None:intergenic
TTCAAAGGTATAGTCTTTAA+AGG 0.245194 1_3:-2554735 None:intergenic
TTCCAATTTCTTTCAAATTT+GGG 0.263443 1_3:+2554985 Msa0096830:three_prime_UTR
GATCAGAGTCACCAAGTTTC+CGG 0.264903 1_3:-2550534 None:intergenic
CGTTATGCGGCCGTACAAAC+TGG 0.271337 1_3:+2554830 Msa0096830:three_prime_UTR
CAAGCAAGCTATAGCTGTTC+TGG 0.272185 1_3:-2553251 None:intergenic
TTCTGGATACTGACAATCTT+TGG 0.280723 1_3:-2553234 None:intergenic
GTCTCTTTCTTCATTGGAAT+CGG 0.294986 1_3:-2552026 None:intergenic
GATCGCTACGTTGCATTGTT+TGG 0.310293 1_3:+2552671 Msa0096830:CDS
CAATGTTTCAGATGACCTTT+GGG 0.314548 1_3:+2551606 Msa0096830:intron
AGGAGTTAAACCATGTTTCT+TGG 0.319091 1_3:-2554530 None:intergenic
ATTCCTATGATCCTTCAAAA+TGG 0.338544 1_3:+2552699 Msa0096830:CDS
AATCCAAGCGCGAGCTGAAC+AGG 0.376331 1_3:-2554550 None:intergenic
GCAATGTTTCAGATGACCTT+TGG 0.382335 1_3:+2551605 Msa0096830:intron
TTGTCATAACAAGTTAGTTT+TGG 0.387662 1_3:-2550203 None:intergenic
TGTGAGAGATCGTCCATTCA+TGG 0.397619 1_3:+2554573 Msa0096830:CDS
TTTCAAGAACTTATCAATGA+AGG 0.411788 1_3:+2552758 Msa0096830:CDS
TGAGAGATCGAGTTACTTAC+GGG 0.414574 1_3:+2552301 Msa0096830:CDS
CTGAGAGATCGAGTTACTTA+CGG 0.423724 1_3:+2552300 Msa0096830:CDS
ATAATTGAACTCGCCATGAA+TGG 0.430321 1_3:-2554586 None:intergenic
ACTCCTGTTCAGCTCGCGCT+TGG 0.430695 1_3:+2554547 Msa0096830:CDS
TTGATTTGTTGCAAATTCAT+TGG 0.436665 1_3:+2552408 Msa0096830:CDS
CCATTGCAGTACCGGAAACT+TGG 0.436754 1_3:+2550523 Msa0096830:CDS
TTCATGGCGAGTTCAATTAT+CGG 0.446341 1_3:+2554589 Msa0096830:CDS
TCTCTTTCTTCATTGGAATC+GGG 0.450697 1_3:-2552025 None:intergenic
ATTCCTGTCATGACTTCTGC+TGG 0.463780 1_3:-2554676 None:intergenic
ATAATAGCAACAAAAGTTTG+CGG 0.464176 1_3:+2552272 Msa0096830:CDS
GTTTCAAATGAGACTTCATA+TGG 0.472814 1_3:+2553171 Msa0096830:CDS
AACAATGCAACGTAGCGATC+TGG 0.476923 1_3:-2552668 None:intergenic
AGAAAAGTCTTAAGCGTCTC+GGG 0.484155 1_3:+2552375 Msa0096830:CDS
TCAACAATCCATTGCAGTAC+CGG 0.485809 1_3:+2550515 Msa0096830:CDS
TATTCAATACCCAGTTTGTA+CGG 0.498226 1_3:-2554840 None:intergenic
CTGATCTCTATATAGCTAGC+TGG 0.502112 1_3:+2552060 Msa0096830:CDS
AATATCAGTGAAATCACTCT+TGG 0.502115 1_3:+2550559 Msa0096830:CDS
TGTTCAACAAACGGCACACT+AGG 0.508236 1_3:-2552725 None:intergenic
CTTGAGTTGGCCAAGAAACA+TGG 0.517065 1_3:+2554520 Msa0096830:CDS
CCAAGTTTCCGGTACTGCAA+TGG 0.518284 1_3:-2550523 None:intergenic
GTCATGACTTCTGCTGGTAA+AGG 0.518717 1_3:-2554670 None:intergenic
GTCCATGCAGCTAAAGTTGA+GGG 0.519118 1_3:+2553207 Msa0096830:CDS
TATAGTCTTTAAAGGATGCT+AGG 0.527210 1_3:-2554727 None:intergenic
ATATTCTTATATCAGTTCCA+TGG 0.527633 1_3:+2554767 Msa0096830:three_prime_UTR
CATTGACAAATAACTCAACA+TGG 0.528289 1_3:-2554865 None:intergenic
AACTATTAAGTATCTTGAGT+TGG 0.528848 1_3:+2554507 Msa0096830:CDS
GTTATGCGGCCGTACAAACT+GGG 0.534500 1_3:+2554831 Msa0096830:three_prime_UTR
CTCAATTATGCATTCGAGAA+CGG 0.534994 1_3:+2551662 Msa0096830:CDS
GCTTGCAACTGTTCAACAAA+CGG 0.537666 1_3:-2552734 None:intergenic
CTAACTTGTTATGACAAAAG+AGG 0.539684 1_3:+2550209 Msa0096830:five_prime_UTR
GTACTGCAATGGATTGTTGA+TGG 0.539963 1_3:-2550512 None:intergenic
GTCCCTCAACTTTAGCTGCA+TGG 0.544863 1_3:-2553209 None:intergenic
AGCTGCTAAGAAGCCATGGC+CGG 0.553641 1_3:+2550343 Msa0096830:exon
TTGTGTGAGAGAATGAGAAA+TGG 0.556485 1_3:-2550395 None:intergenic
ATTCAATATGTATCTATCCA+TGG 0.559972 1_3:-2554784 None:intergenic
AGAACTTATCAATGAAGGAA+AGG 0.566138 1_3:+2552763 Msa0096830:CDS
ATGCATCAGGTACGTTACAT+AGG 0.569919 1_3:+2553147 Msa0096830:intron
TGAGACTTCATATGGAGTGA+TGG 0.573984 1_3:+2553179 Msa0096830:CDS
GAGAAAAGTCTTAAGCGTCT+CGG 0.577051 1_3:+2552374 Msa0096830:CDS
CGTCCATGCAGCTAAAGTTG+AGG 0.578730 1_3:+2553206 Msa0096830:CDS
GAAAGAGCAGACACCGGCCA+TGG 0.588039 1_3:-2550356 None:intergenic
GATGTGCACGAGTGTGGTGT+TGG 0.599619 1_3:+2550239 Msa0096830:five_prime_UTR
AATTATCGGTGCAACATCTG+TGG 0.606607 1_3:+2554603 Msa0096830:CDS
GATAAGCTGCTAAGAAGCCA+TGG 0.609538 1_3:+2550339 Msa0096830:exon
TTACCAGCAGAAGTCATGAC+AGG 0.613222 1_3:+2554673 Msa0096830:CDS
GACAAATATCAAAGAAAGTG+TGG 0.614604 1_3:+2552352 Msa0096830:CDS
CCTATGATCCTTCAAAATGG+AGG 0.632626 1_3:+2552702 Msa0096830:CDS
AGAAATGGCAACAACGTCGG+AGG 0.648860 1_3:-2550380 None:intergenic
TTGATGGCGGCACAAACAAG+AGG 0.649025 1_3:-2550496 None:intergenic
ATTGACAAATAACTCAACAT+GGG 0.663910 1_3:-2554864 None:intergenic
GAAATCTCAATCTCGTGACA+AGG 0.665936 1_3:+2552085 Msa0096830:CDS
ATGAGAAATGGCAACAACGT+CGG 0.668018 1_3:-2550383 None:intergenic
GGAGGAGAAAGAGCAGACAC+CGG 0.670007 1_3:-2550362 None:intergenic
CCAATGAAGAAAGAGACACA+AGG 0.681685 1_3:+2552032 Msa0096830:CDS
AACAACGTGTTTGTATTGTG+TGG 0.687492 1_3:+2550308 Msa0096830:five_prime_UTR
AATGTTTCAGATGACCTTTG+GGG 0.691458 1_3:+2551607 Msa0096830:intron
TAATGCTCTTGATACTGCTG+AGG 0.693085 1_3:+2551688 Msa0096830:CDS
TGAGGAGGACGAGAACTGTG+AGG 0.703003 1_3:+2550473 Msa0096830:CDS
CTATAACAAACAATAAACAG+AGG 0.721790 1_3:+2550275 Msa0096830:five_prime_UTR
CTGCAATGGATTGTTGATGG+CGG 0.723159 1_3:-2550509 None:intergenic
GTACTTACGAAAACGTTATG+CGG 0.742006 1_3:+2554817 Msa0096830:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAATGTAAAGTAGA+AGG + chr1_3:2551319-2551338 Msa0096830:intron 15.0%
!! AAAAAAATAAATGAAGAGAA+TGG - chr1_3:2551414-2551433 None:intergenic 15.0%
!! ACCTATACATTTATATAAAA+GGG - chr1_3:2551493-2551512 None:intergenic 15.0%
!! AACCTATACATTTATATAAA+AGG - chr1_3:2551494-2551513 None:intergenic 15.0%
!! TAAAATTCAAGTATTTGAAT+TGG + chr1_3:2551788-2551807 Msa0096830:intron 15.0%
!!! AATGTGATTTTTATTGTATT+AGG + chr1_3:2552546-2552565 Msa0096830:intron 15.0%
!!! ATGTAATACTTTTAAAACTT+GGG - chr1_3:2553448-2553467 None:intergenic 15.0%
!!! AATGTAATACTTTTAAAACT+TGG - chr1_3:2553449-2553468 None:intergenic 15.0%
!!! TATTTTTGCAAATTTCTTAA+TGG - chr1_3:2553958-2553977 None:intergenic 15.0%
!! AATAAAGGAAAATTCTTAAT+TGG - chr1_3:2554462-2554481 None:intergenic 15.0%
!! AATTGATTATACTTGAAACT+AGG - chr1_3:2550880-2550899 None:intergenic 20.0%
!!! AAAATTGATTTCAACATGTT+TGG - chr1_3:2550935-2550954 None:intergenic 20.0%
!!! TTTTTGGAAAATTTGATACA+CGG - chr1_3:2551206-2551225 None:intergenic 20.0%
!!! CAAATTTTCCAAAAAATAGA+TGG + chr1_3:2551211-2551230 Msa0096830:intron 20.0%
!!! TCCCTTTTATATAAATGTAT+AGG + chr1_3:2551489-2551508 Msa0096830:intron 20.0%
!! TATTATAATCTATGCACAAA+GGG - chr1_3:2552258-2552277 None:intergenic 20.0%
!! TATGATGCTTATTACTTTAT+TGG + chr1_3:2552456-2552475 Msa0096830:intron 20.0%
!! TAACTATTACTATAGATTGA+AGG - chr1_3:2552942-2552961 None:intergenic 20.0%
!!! TGTAATACTTTTAAAACTTG+GGG - chr1_3:2553447-2553466 None:intergenic 20.0%
!!! TTCCTTTATTTTTTCATGTT+TGG + chr1_3:2554472-2554491 Msa0096830:intron 20.0%
!! AACCAAACATGAAAAAATAA+AGG - chr1_3:2554477-2554496 None:intergenic 20.0%
!! TTCCAATTTCTTTCAAATTT+GGG + chr1_3:2554985-2555004 Msa0096830:three_prime_UTR 20.0%
! CTATAACAAACAATAAACAG+AGG + chr1_3:2550275-2550294 Msa0096830:five_prime_UTR 25.0%
!! GTTTCAAGTATAATCAATTC+TGG + chr1_3:2550881-2550900 Msa0096830:intron 25.0%
! TGAACATAAGTTTATAAGTG+GGG - chr1_3:2551256-2551275 None:intergenic 25.0%
! CTGAACATAAGTTTATAAGT+GGG - chr1_3:2551257-2551276 None:intergenic 25.0%
! AAACAGACTAATAATCATGA+TGG - chr1_3:2551876-2551895 None:intergenic 25.0%
!! TAAATCTCAATTTAGCTTCA+GGG - chr1_3:2552160-2552179 None:intergenic 25.0%
!! GATTTAGATTTCAGTTGTTT+TGG + chr1_3:2552174-2552193 Msa0096830:intron 25.0%
! ATTATAATCTATGCACAAAG+GGG - chr1_3:2552257-2552276 None:intergenic 25.0%
! CTATTATAATCTATGCACAA+AGG - chr1_3:2552259-2552278 None:intergenic 25.0%
! ATAATAGCAACAAAAGTTTG+CGG + chr1_3:2552272-2552291 Msa0096830:CDS 25.0%
!!! TTGATTTGTTGCAAATTCAT+TGG + chr1_3:2552408-2552427 Msa0096830:CDS 25.0%
!! TTTAAAACTTAAGTCAAGCA+TGG + chr1_3:2552513-2552532 Msa0096830:intron 25.0%
!! TGATTTTCTGCTTTCATTAT+AGG + chr1_3:2552645-2552664 Msa0096830:intron 25.0%
! TTTCAAGAACTTATCAATGA+AGG + chr1_3:2552758-2552777 Msa0096830:CDS 25.0%
! TAGAAAAGATAAAGCATGTT+AGG - chr1_3:2552798-2552817 None:intergenic 25.0%
! AACACGAATCATATACTATA+AGG - chr1_3:2553386-2553405 None:intergenic 25.0%
!!! TTTTTTATTTTGGACTCTCT+AGG - chr1_3:2553478-2553497 None:intergenic 25.0%
! TAGAGAGTCCAAAATAAAAA+AGG + chr1_3:2553477-2553496 Msa0096830:intron 25.0%
! ACAAATGATTACAGATAACA+TGG + chr1_3:2553576-2553595 Msa0096830:intron 25.0%
! AACCATACACTAAAAGTTTA+CGG - chr1_3:2553822-2553841 None:intergenic 25.0%
!!! TAATTCGGTTTTGAAAAAGA+CGG - chr1_3:2554282-2554301 None:intergenic 25.0%
! TTATAATAACCAAACTGAAC+TGG - chr1_3:2554397-2554416 None:intergenic 25.0%
!!! TTTTTTCATGTTTGGTTTTC+AGG + chr1_3:2554480-2554499 Msa0096830:intron 25.0%
! AACTATTAAGTATCTTGAGT+TGG + chr1_3:2554507-2554526 Msa0096830:CDS 25.0%
!! TTCAAAGGTATAGTCTTTAA+AGG - chr1_3:2554738-2554757 None:intergenic 25.0%
!! GACTATACCTTTGAATTTTT+CGG + chr1_3:2554743-2554762 Msa0096830:three_prime_UTR 25.0%
!! ACTATACCTTTGAATTTTTC+GGG + chr1_3:2554744-2554763 Msa0096830:three_prime_UTR 25.0%
! ATATTCTTATATCAGTTCCA+TGG + chr1_3:2554767-2554786 Msa0096830:three_prime_UTR 25.0%
! ATTCAATATGTATCTATCCA+TGG - chr1_3:2554787-2554806 None:intergenic 25.0%
! ATTGACAAATAACTCAACAT+GGG - chr1_3:2554867-2554886 None:intergenic 25.0%
! GTTCCAATTTCTTTCAAATT+TGG + chr1_3:2554984-2555003 Msa0096830:three_prime_UTR 25.0%
! TTCCCAAATTTGAAAGAAAT+TGG - chr1_3:2554990-2555009 None:intergenic 25.0%
!! CTAACTTGTTATGACAAAAG+AGG + chr1_3:2550209-2550228 Msa0096830:five_prime_UTR 30.0%
AATATCAGTGAAATCACTCT+TGG + chr1_3:2550559-2550578 Msa0096830:CDS 30.0%
TTAGACAAGTTAGACTCAAT+AGG - chr1_3:2550680-2550699 None:intergenic 30.0%
!! TTAGTGCATGTTTTGTTCTA+TGG + chr1_3:2550701-2550720 Msa0096830:intron 30.0%
CTTTACTTTCAACTCACTTT+CGG - chr1_3:2550771-2550790 None:intergenic 30.0%
! TACACCTCCAGAATTAATTT+TGG + chr1_3:2550954-2550973 Msa0096830:intron 30.0%
! ACACCTCCAGAATTAATTTT+GGG + chr1_3:2550955-2550974 Msa0096830:intron 30.0%
!!! CATGCTGGTTTTTTGTTTTA+AGG - chr1_3:2551016-2551035 None:intergenic 30.0%
! AGTTTTACTCTGACTTCAAT+TGG + chr1_3:2551130-2551149 Msa0096830:intron 30.0%
! GTTTTACTCTGACTTCAATT+GGG + chr1_3:2551131-2551150 Msa0096830:intron 30.0%
!!! CTTACAAGCCATCTATTTTT+TGG - chr1_3:2551222-2551241 None:intergenic 30.0%
! CAAAAAATAGATGGCTTGTA+AGG + chr1_3:2551220-2551239 Msa0096830:intron 30.0%
CCTGAACATAAGTTTATAAG+TGG - chr1_3:2551258-2551277 None:intergenic 30.0%
CCACTTATAAACTTATGTTC+AGG + chr1_3:2551255-2551274 Msa0096830:intron 30.0%
AATCAAGATTGTTAAAGTCC+CGG - chr1_3:2551296-2551315 None:intergenic 30.0%
! TGACAAGGTATTAGTTATTC+AGG + chr1_3:2552100-2552119 Msa0096830:intron 30.0%
GTATTAGTTATTCAGGAGTT+TGG + chr1_3:2552107-2552126 Msa0096830:intron 30.0%
! CTAAATCTCAATTTAGCTTC+AGG - chr1_3:2552161-2552180 None:intergenic 30.0%
TTATAATCTATGCACAAAGG+GGG - chr1_3:2552256-2552275 None:intergenic 30.0%
GACAAATATCAAAGAAAGTG+TGG + chr1_3:2552352-2552371 Msa0096830:CDS 30.0%
! ATTTGTTGCAAATTCATTGG+TGG + chr1_3:2552411-2552430 Msa0096830:intron 30.0%
TTTGTTGCAAATTCATTGGT+GGG + chr1_3:2552412-2552431 Msa0096830:intron 30.0%
GATGCTTATTACTTTATTGG+TGG + chr1_3:2552459-2552478 Msa0096830:intron 30.0%
!! GTTCAAAAACAATTTTAGCC+TGG - chr1_3:2552601-2552620 None:intergenic 30.0%
ATTCCTATGATCCTTCAAAA+TGG + chr1_3:2552699-2552718 Msa0096830:CDS 30.0%
AGAACTTATCAATGAAGGAA+AGG + chr1_3:2552763-2552782 Msa0096830:CDS 30.0%
AGATAAAGCATGTTAGGAAT+AGG - chr1_3:2552792-2552811 None:intergenic 30.0%
TCAAAGACTTATGAATCACA+AGG - chr1_3:2553034-2553053 None:intergenic 30.0%
AGTTTATGCTAATTGATGTG+TGG - chr1_3:2553077-2553096 None:intergenic 30.0%
!! TTTGTATTTTTGCATGCATC+AGG + chr1_3:2553134-2553153 Msa0096830:intron 30.0%
GTTTCAAATGAGACTTCATA+TGG + chr1_3:2553171-2553190 Msa0096830:CDS 30.0%
ATCACTTAATTCTGTATTGC+TGG + chr1_3:2553336-2553355 Msa0096830:intron 30.0%
TCATATACTATAAGGACAAC+AGG - chr1_3:2553378-2553397 None:intergenic 30.0%
!!! CAGGAAAGCCTTTTTTATTT+TGG - chr1_3:2553488-2553507 None:intergenic 30.0%
GATTACAGATAACATGGTTT+AGG + chr1_3:2553582-2553601 Msa0096830:intron 30.0%
TCTCACAATCAGCAATTTAT+AGG + chr1_3:2553681-2553700 Msa0096830:intron 30.0%
TCCAATTTATCCTTCAAACA+TGG + chr1_3:2553743-2553762 Msa0096830:intron 30.0%
CCAATTTATCCTTCAAACAT+GGG + chr1_3:2553744-2553763 Msa0096830:intron 30.0%
GATCATATTCATATGCACTT+TGG + chr1_3:2553766-2553785 Msa0096830:intron 30.0%
!!! TTGGACGTTTTTGAAGTTTA+AGG - chr1_3:2553793-2553812 None:intergenic 30.0%
TAAAAGTTTACGGATCACAT+TGG - chr1_3:2553812-2553831 None:intergenic 30.0%
! ATCCGTAAACTTTTAGTGTA+TGG + chr1_3:2553817-2553836 Msa0096830:intron 30.0%
!! AATTCTAAAGCTGCAAAAAG+TGG + chr1_3:2554163-2554182 Msa0096830:intron 30.0%
GATATAACCAATCACTTTCA+CGG + chr1_3:2554218-2554237 Msa0096830:intron 30.0%
ATATAACCAATCACTTTCAC+GGG + chr1_3:2554219-2554238 Msa0096830:intron 30.0%
TTCAATGACTTTAAACCACT+CGG + chr1_3:2554333-2554352 Msa0096830:intron 30.0%
TTATTTGAGCAGTTCAATTG+CGG - chr1_3:2554365-2554384 None:intergenic 30.0%
CAGTTTGGTTATTATAACAC+TGG + chr1_3:2554400-2554419 Msa0096830:intron 30.0%
ATTGGTTATCTTGTTAACCA+TGG - chr1_3:2554444-2554463 None:intergenic 30.0%
! CATCAATGTCTTCTTTTAGT+TGG - chr1_3:2554630-2554649 None:intergenic 30.0%
! ATGCTTTTACAACAACTGAA+CGG + chr1_3:2554647-2554666 Msa0096830:CDS 30.0%
! TATAGTCTTTAAAGGATGCT+AGG - chr1_3:2554730-2554749 None:intergenic 30.0%
GAATATCCCGAAAAATTCAA+AGG - chr1_3:2554753-2554772 None:intergenic 30.0%
TATTCAATACCCAGTTTGTA+CGG - chr1_3:2554843-2554862 None:intergenic 30.0%
CATTGACAAATAACTCAACA+TGG - chr1_3:2554868-2554887 None:intergenic 30.0%
AACAACGTGTTTGTATTGTG+TGG + chr1_3:2550308-2550327 Msa0096830:five_prime_UTR 35.0%
TTGTGTGAGAGAATGAGAAA+TGG - chr1_3:2550398-2550417 None:intergenic 35.0%
! GTAGAAGAAGATGCATTTTG+AGG + chr1_3:2550455-2550474 Msa0096830:CDS 35.0%
!! TGTTTTGTTCCACTTCTAGA+GGG - chr1_3:2550981-2551000 None:intergenic 35.0%
!! TTGTTTTGTTCCACTTCTAG+AGG - chr1_3:2550982-2551001 None:intergenic 35.0%
GTGCTAACAATTCCTTTGTT+GGG + chr1_3:2551094-2551113 Msa0096830:intron 35.0%
! GTAGCATGTTGTTGATTGAT+TGG + chr1_3:2551581-2551600 Msa0096830:intron 35.0%
CAATGTTTCAGATGACCTTT+GGG + chr1_3:2551606-2551625 Msa0096830:intron 35.0%
AATGTTTCAGATGACCTTTG+GGG + chr1_3:2551607-2551626 Msa0096830:intron 35.0%
CTCAATTATGCATTCGAGAA+CGG + chr1_3:2551662-2551681 Msa0096830:CDS 35.0%
GTGAAAATGAGATGGAATGA+AGG - chr1_3:2551745-2551764 None:intergenic 35.0%
GTACAAGTGTGAAAATGAGA+TGG - chr1_3:2551753-2551772 None:intergenic 35.0%
TCTCTTTCTTCATTGGAATC+GGG - chr1_3:2552028-2552047 None:intergenic 35.0%
GTCTCTTTCTTCATTGGAAT+CGG - chr1_3:2552029-2552048 None:intergenic 35.0%
! AGAAATAGTGATGATGAACC+AGG + chr1_3:2552580-2552599 Msa0096830:intron 35.0%
! AGCAAATACAAAGTACTCCT+CGG - chr1_3:2552870-2552889 None:intergenic 35.0%
TCACATACACATGTACAAGA+AGG - chr1_3:2553105-2553124 None:intergenic 35.0%
TTCTGGATACTGACAATCTT+TGG - chr1_3:2553237-2553256 None:intergenic 35.0%
!! CTTGTAAGAAGTCGTTTTGA+AGG + chr1_3:2553270-2553289 Msa0096830:CDS 35.0%
CCAAGTATTCAAAGATCTAC+AGG - chr1_3:2553507-2553526 None:intergenic 35.0%
CCTGTAGATCTTTGAATACT+TGG + chr1_3:2553504-2553523 Msa0096830:intron 35.0%
!!! TTTAGGATTTTAGTTGCCAG+AGG + chr1_3:2553599-2553618 Msa0096830:intron 35.0%
CCCATGTTTGAAGGATAAAT+TGG - chr1_3:2553747-2553766 None:intergenic 35.0%
GAATATGATCCCATGTTTGA+AGG - chr1_3:2553756-2553775 None:intergenic 35.0%
AGCTTCTTCATGTTCTTAGT+TGG + chr1_3:2554023-2554042 Msa0096830:intron 35.0%
CAATGTTGCAATTCTTTGGA+TGG - chr1_3:2554084-2554103 None:intergenic 35.0%
CATCCAAAGAATTGCAACAT+TGG + chr1_3:2554082-2554101 Msa0096830:intron 35.0%
AAGCCAATGTTGCAATTCTT+TGG - chr1_3:2554088-2554107 None:intergenic 35.0%
TATATCTTTCCATGTAGCCA+GGG - chr1_3:2554204-2554223 None:intergenic 35.0%
TTATATCTTTCCATGTAGCC+AGG - chr1_3:2554205-2554224 None:intergenic 35.0%
AATAACCAAACTGAACTGGA+TGG - chr1_3:2554393-2554412 None:intergenic 35.0%
! GTTAACCATGGTTTAGAGTA+TGG - chr1_3:2554432-2554451 None:intergenic 35.0%
AGGAGTTAAACCATGTTTCT+TGG - chr1_3:2554533-2554552 None:intergenic 35.0%
ATAATTGAACTCGCCATGAA+TGG - chr1_3:2554589-2554608 None:intergenic 35.0%
TTCATGGCGAGTTCAATTAT+CGG + chr1_3:2554589-2554608 Msa0096830:CDS 35.0%
GTACTTACGAAAACGTTATG+CGG + chr1_3:2554817-2554836 Msa0096830:three_prime_UTR 35.0%
ATGAGAAATGGCAACAACGT+CGG - chr1_3:2550386-2550405 None:intergenic 40.0%
!! GAAGAAGATGCATTTTGAGG+AGG + chr1_3:2550458-2550477 Msa0096830:CDS 40.0%
!! GTACTGCAATGGATTGTTGA+TGG - chr1_3:2550515-2550534 None:intergenic 40.0%
TCAACAATCCATTGCAGTAC+CGG + chr1_3:2550515-2550534 Msa0096830:CDS 40.0%
AGAGGGCCCAAAATTAATTC+TGG - chr1_3:2550964-2550983 None:intergenic 40.0%
AAAAAACCAGCATGTAACCC+AGG + chr1_3:2551022-2551041 Msa0096830:intron 40.0%
AAAAACCAGCATGTAACCCA+GGG + chr1_3:2551023-2551042 Msa0096830:intron 40.0%
TTCGAACTTGACACCTAAAG+AGG - chr1_3:2551066-2551085 None:intergenic 40.0%
AAAGGAATTGTTAGCACCTG+GGG - chr1_3:2551091-2551110 None:intergenic 40.0%
CAAAGGAATTGTTAGCACCT+GGG - chr1_3:2551092-2551111 None:intergenic 40.0%
ACAAAGGAATTGTTAGCACC+TGG - chr1_3:2551093-2551112 None:intergenic 40.0%
GGTGCTAACAATTCCTTTGT+TGG + chr1_3:2551093-2551112 Msa0096830:intron 40.0%
TATATGAACTCGCCCAACAA+AGG - chr1_3:2551109-2551128 None:intergenic 40.0%
! AATAGATGGCTTGTAAGGTG+AGG + chr1_3:2551225-2551244 Msa0096830:intron 40.0%
GCAATGTTTCAGATGACCTT+TGG + chr1_3:2551605-2551624 Msa0096830:intron 40.0%
TAATGCTCTTGATACTGCTG+AGG + chr1_3:2551688-2551707 Msa0096830:CDS 40.0%
AGTTGTGTGTAGGGATAACT+TGG - chr1_3:2551925-2551944 None:intergenic 40.0%
GATTGCAAGAGTTGTGTGTA+GGG - chr1_3:2551934-2551953 None:intergenic 40.0%
AGATTGCAAGAGTTGTGTGT+AGG - chr1_3:2551935-2551954 None:intergenic 40.0%
CCTTGTGTCTCTTTCTTCAT+TGG - chr1_3:2552035-2552054 None:intergenic 40.0%
CCAATGAAGAAAGAGACACA+AGG + chr1_3:2552032-2552051 Msa0096830:CDS 40.0%
CTGATCTCTATATAGCTAGC+TGG + chr1_3:2552060-2552079 Msa0096830:CDS 40.0%
GAAATCTCAATCTCGTGACA+AGG + chr1_3:2552085-2552104 Msa0096830:CDS 40.0%
CTGAGAGATCGAGTTACTTA+CGG + chr1_3:2552300-2552319 Msa0096830:CDS 40.0%
TGAGAGATCGAGTTACTTAC+GGG + chr1_3:2552301-2552320 Msa0096830:CDS 40.0%
GAGAAAAGTCTTAAGCGTCT+CGG + chr1_3:2552374-2552393 Msa0096830:CDS 40.0%
AGAAAAGTCTTAAGCGTCTC+GGG + chr1_3:2552375-2552394 Msa0096830:CDS 40.0%
!! CCTCCATTTTGAAGGATCAT+AGG - chr1_3:2552705-2552724 None:intergenic 40.0%
CCTATGATCCTTCAAAATGG+AGG + chr1_3:2552702-2552721 Msa0096830:CDS 40.0%
GCTTGCAACTGTTCAACAAA+CGG - chr1_3:2552737-2552756 None:intergenic 40.0%
ATGCATCAGGTACGTTACAT+AGG + chr1_3:2553147-2553166 Msa0096830:intron 40.0%
TGAGACTTCATATGGAGTGA+TGG + chr1_3:2553179-2553198 Msa0096830:CDS 40.0%
! AGTACAGTTCTTTTCTGACG+TGG + chr1_3:2553295-2553314 Msa0096830:intron 40.0%
TTGAAGGTGGCAAGAGAAAT+AGG + chr1_3:2553629-2553648 Msa0096830:intron 40.0%
!! GCATACATTCTCCTGCTTTT+GGG + chr1_3:2553703-2553722 Msa0096830:intron 40.0%
!! CATACATTCTCCTGCTTTTG+GGG + chr1_3:2553704-2553723 Msa0096830:intron 40.0%
GCTAAAAATTCCCCAAAAGC+AGG - chr1_3:2553717-2553736 None:intergenic 40.0%
ATTTACCCCACTCCAAGTTA+GGG - chr1_3:2553925-2553944 None:intergenic 40.0%
AATTTACCCCACTCCAAGTT+AGG - chr1_3:2553926-2553945 None:intergenic 40.0%
ACTTCACATCCGCTAACTTA+GGG - chr1_3:2553999-2554018 None:intergenic 40.0%
AACTTCACATCCGCTAACTT+AGG - chr1_3:2554000-2554019 None:intergenic 40.0%
!! TGTTTTTGCAGTTGATCTCG+TGG + chr1_3:2554051-2554070 Msa0096830:intron 40.0%
TTCTTACCCGTGAAAGTGAT+TGG - chr1_3:2554228-2554247 None:intergenic 40.0%
TGCTGGTACGATGTCTAATT+CGG - chr1_3:2554297-2554316 None:intergenic 40.0%
TCAGACCATACTCTAAACCA+TGG + chr1_3:2554424-2554443 Msa0096830:intron 40.0%
AATTATCGGTGCAACATCTG+TGG + chr1_3:2554603-2554622 Msa0096830:CDS 40.0%
AAAAACGATGTGCACGAGTG+TGG + chr1_3:2550233-2550252 Msa0096830:five_prime_UTR 45.0%
GATAAGCTGCTAAGAAGCCA+TGG + chr1_3:2550339-2550358 Msa0096830:exon 45.0%
!! CTGCAATGGATTGTTGATGG+CGG - chr1_3:2550512-2550531 None:intergenic 45.0%
GATCAGAGTCACCAAGTTTC+CGG - chr1_3:2550537-2550556 None:intergenic 45.0%
GGGCCCAAAATTAATTCTGG+AGG - chr1_3:2550961-2550980 None:intergenic 45.0%
!! AATTTTGGGCCCTCTAGAAG+TGG + chr1_3:2550969-2550988 Msa0096830:intron 45.0%
! ACCTAAAGAGGCATACTCCT+AGG - chr1_3:2551054-2551073 None:intergenic 45.0%
AAGGAATTGTTAGCACCTGG+GGG - chr1_3:2551090-2551109 None:intergenic 45.0%
AATCCTATCATCCACTAGCG+AGG - chr1_3:2551157-2551176 None:intergenic 45.0%
! TCGCTAGTGGATGATAGGAT+TGG + chr1_3:2551156-2551175 Msa0096830:intron 45.0%
! TCCTCTGACTAGTCGGTTAT+TGG + chr1_3:2551179-2551198 Msa0096830:intron 45.0%
! TCCAATAACCGACTAGTCAG+AGG - chr1_3:2551183-2551202 None:intergenic 45.0%
CAGGTCAGTCTCATTCAATC+CGG + chr1_3:2551274-2551293 Msa0096830:intron 45.0%
AGGTCAGTCTCATTCAATCC+GGG + chr1_3:2551275-2551294 Msa0096830:intron 45.0%
! TTCTGTGTTTTGCTCCCCAA+AGG - chr1_3:2551624-2551643 None:intergenic 45.0%
! GGGACAATGCAGACATTTTG+CGG + chr1_3:2552321-2552340 Msa0096830:CDS 45.0%
! GGACAATGCAGACATTTTGC+GGG + chr1_3:2552322-2552341 Msa0096830:CDS 45.0%
AACAATGCAACGTAGCGATC+TGG - chr1_3:2552671-2552690 None:intergenic 45.0%
GATCGCTACGTTGCATTGTT+TGG + chr1_3:2552671-2552690 Msa0096830:CDS 45.0%
! ACACTAGGCCTCCATTTTGA+AGG - chr1_3:2552713-2552732 None:intergenic 45.0%
TGTTCAACAAACGGCACACT+AGG - chr1_3:2552728-2552747 None:intergenic 45.0%
!!! GTTTTGACTTAGAGAAGCCG+AGG + chr1_3:2552850-2552869 Msa0096830:intron 45.0%
GTCCATGCAGCTAAAGTTGA+GGG + chr1_3:2553207-2553226 Msa0096830:CDS 45.0%
CAAGCAAGCTATAGCTGTTC+TGG - chr1_3:2553254-2553273 None:intergenic 45.0%
!! TTTTAGTTGCCAGAGGTGCA+AGG + chr1_3:2553606-2553625 Msa0096830:intron 45.0%
! GGCATACATTCTCCTGCTTT+TGG + chr1_3:2553702-2553721 Msa0096830:intron 45.0%
AGTCCAGTTGAACCCTAACT+TGG + chr1_3:2553910-2553929 Msa0096830:intron 45.0%
ACTCCAAGTTAGGGTTCAAC+TGG - chr1_3:2553916-2553935 None:intergenic 45.0%
AGTTGAACCCTAACTTGGAG+TGG + chr1_3:2553915-2553934 Msa0096830:intron 45.0%
GTTGAACCCTAACTTGGAGT+GGG + chr1_3:2553916-2553935 Msa0096830:intron 45.0%
TTGAACCCTAACTTGGAGTG+GGG + chr1_3:2553917-2553936 Msa0096830:intron 45.0%
TTGCTATCCTATTCCCCACT+AGG + chr1_3:2554106-2554125 Msa0096830:intron 45.0%
ATCGTACCAGCATGACTTCT+GGG + chr1_3:2554305-2554324 Msa0096830:intron 45.0%
CTGAACCATCCAGTTCAGTT+TGG + chr1_3:2554385-2554404 Msa0096830:intron 45.0%
!! CTTGAGTTGGCCAAGAAACA+TGG + chr1_3:2554520-2554539 Msa0096830:CDS 45.0%
TGTGAGAGATCGTCCATTCA+TGG + chr1_3:2554573-2554592 Msa0096830:CDS 45.0%
GTCATGACTTCTGCTGGTAA+AGG - chr1_3:2554673-2554692 None:intergenic 45.0%
TTACCAGCAGAAGTCATGAC+AGG + chr1_3:2554673-2554692 Msa0096830:CDS 45.0%
ATTCCTGTCATGACTTCTGC+TGG - chr1_3:2554679-2554698 None:intergenic 45.0%
!!! TTTATTTGAAATTATTATTA+AGG + chr1_3:2551431-2551450 Msa0096830:intron 5.0%
!!! TTATTTGAAATTATTATTAA+GGG + chr1_3:2551432-2551451 Msa0096830:intron 5.0%
AGAAATGGCAACAACGTCGG+AGG - chr1_3:2550383-2550402 None:intergenic 50.0%
!! TTGATGGCGGCACAAACAAG+AGG - chr1_3:2550499-2550518 None:intergenic 50.0%
CCAAGTTTCCGGTACTGCAA+TGG - chr1_3:2550526-2550545 None:intergenic 50.0%
! CCATTGCAGTACCGGAAACT+TGG + chr1_3:2550523-2550542 Msa0096830:CDS 50.0%
ATACTCCTAGGCCAATCCCT+GGG - chr1_3:2551042-2551061 None:intergenic 50.0%
! GCCTAGGAGTATGCCTCTTT+AGG + chr1_3:2551050-2551069 Msa0096830:intron 50.0%
!! GGATTGGTCCTCTGACTAGT+CGG + chr1_3:2551172-2551191 Msa0096830:intron 50.0%
CGTCCATGCAGCTAAAGTTG+AGG + chr1_3:2553206-2553225 Msa0096830:CDS 50.0%
GTCCCTCAACTTTAGCTGCA+TGG - chr1_3:2553212-2553231 None:intergenic 50.0%
GCACCATGACCCTAAGTTAG+CGG + chr1_3:2553987-2554006 Msa0096830:intron 50.0%
CATCCGCTAACTTAGGGTCA+TGG - chr1_3:2553993-2554012 None:intergenic 50.0%
CTATCCTATTCCCCACTAGG+CGG + chr1_3:2554109-2554128 Msa0096830:intron 50.0%
GGAAGACTGAATCTCTTCCC+TGG + chr1_3:2554184-2554203 Msa0096830:intron 50.0%
GAATCTCTTCCCTGGCTACA+TGG + chr1_3:2554192-2554211 Msa0096830:intron 50.0%
CATCGTACCAGCATGACTTC+TGG + chr1_3:2554304-2554323 Msa0096830:intron 50.0%
!! CAATTGCGGTTTTGTCCGAG+TGG - chr1_3:2554351-2554370 None:intergenic 50.0%
GTTATGCGGCCGTACAAACT+GGG + chr1_3:2554831-2554850 Msa0096830:three_prime_UTR 50.0%
GATGTGCACGAGTGTGGTGT+TGG + chr1_3:2550239-2550258 Msa0096830:five_prime_UTR 55.0%
AGCTGCTAAGAAGCCATGGC+CGG + chr1_3:2550343-2550362 Msa0096830:exon 55.0%
GGAGGAGAAAGAGCAGACAC+CGG - chr1_3:2550365-2550384 None:intergenic 55.0%
TGAGGAGGACGAGAACTGTG+AGG + chr1_3:2550473-2550492 Msa0096830:CDS 55.0%
CCAATCCCTGGGTTACATGC+TGG - chr1_3:2551031-2551050 None:intergenic 55.0%
CCAGCATGTAACCCAGGGAT+TGG + chr1_3:2551028-2551047 Msa0096830:intron 55.0%
!! TGTAACCCAGGGATTGGCCT+AGG + chr1_3:2551034-2551053 Msa0096830:intron 55.0%
CATACTCCTAGGCCAATCCC+TGG - chr1_3:2551043-2551062 None:intergenic 55.0%
GTGTCAAGTTCGAATCCCCC+AGG + chr1_3:2551072-2551091 Msa0096830:intron 55.0%
CTTCAATTGGGCCTCGCTAG+TGG + chr1_3:2551143-2551162 Msa0096830:intron 55.0%
! TGCCAGAGGTGCAAGGTTGA+AGG + chr1_3:2553613-2553632 Msa0096830:intron 55.0%
CACCTTCAACCTTGCACCTC+TGG - chr1_3:2553618-2553637 None:intergenic 55.0%
! CAGAGGTGCAAGGTTGAAGG+TGG + chr1_3:2553616-2553635 Msa0096830:intron 55.0%
ACCAGCATGACTTCTGGGTC+AGG + chr1_3:2554310-2554329 Msa0096830:intron 55.0%
ACCTGACCCAGAAGTCATGC+TGG - chr1_3:2554314-2554333 None:intergenic 55.0%
AATCCAAGCGCGAGCTGAAC+AGG - chr1_3:2554553-2554572 None:intergenic 55.0%
CGTTATGCGGCCGTACAAAC+TGG + chr1_3:2554830-2554849 Msa0096830:three_prime_UTR 55.0%
GAAAGAGCAGACACCGGCCA+TGG - chr1_3:2550359-2550378 None:intergenic 60.0%
! GGGCCTCGCTAGTGGATGAT+AGG + chr1_3:2551151-2551170 Msa0096830:intron 60.0%
TCCTATTCCCCACTAGGCGG+CGG + chr1_3:2554112-2554131 Msa0096830:intron 60.0%
! AGAGTGTTCCGCCGCCTAGT+GGG - chr1_3:2554123-2554142 None:intergenic 60.0%
ACTCCTGTTCAGCTCGCGCT+TGG + chr1_3:2554547-2554566 Msa0096830:CDS 60.0%
TCCGCCGCCTAGTGGGGAAT+AGG - chr1_3:2554116-2554135 None:intergenic 65.0%
GAGTGTTCCGCCGCCTAGTG+GGG - chr1_3:2554122-2554141 None:intergenic 65.0%
!! GAGAGTGTTCCGCCGCCTAG+TGG - chr1_3:2554124-2554143 None:intergenic 65.0%
CTAGGCGGCGGAACACTCTC+TGG + chr1_3:2554124-2554143 Msa0096830:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 2550204 2555022 2550204 ID=Msa0096830;Name=Msa0096830
chr1_3 mRNA 2550204 2555022 2550204 ID=Msa0096830-mRNA-1;Parent=Msa0096830;Name=Msa0096830-mRNA-1;_AED=0.17;_eAED=0.17;_QI=154|0.44|0.7|0.8|1|1|10|281|361
chr1_3 exon 2550204 2550585 2550204 ID=Msa0096830-mRNA-1:exon:665;Parent=Msa0096830-mRNA-1
chr1_3 exon 2551453 2551458 2551453 ID=Msa0096830-mRNA-1:exon:666;Parent=Msa0096830-mRNA-1
chr1_3 exon 2551617 2551712 2551617 ID=Msa0096830-mRNA-1:exon:667;Parent=Msa0096830-mRNA-1
chr1_3 exon 2552023 2552106 2552023 ID=Msa0096830-mRNA-1:exon:668;Parent=Msa0096830-mRNA-1
chr1_3 exon 2552269 2552429 2552269 ID=Msa0096830-mRNA-1:exon:669;Parent=Msa0096830-mRNA-1
chr1_3 exon 2552568 2552576 2552568 ID=Msa0096830-mRNA-1:exon:670;Parent=Msa0096830-mRNA-1
chr1_3 exon 2552667 2552784 2552667 ID=Msa0096830-mRNA-1:exon:671;Parent=Msa0096830-mRNA-1
chr1_3 exon 2553156 2553291 2553156 ID=Msa0096830-mRNA-1:exon:672;Parent=Msa0096830-mRNA-1
chr1_3 exon 2554062 2554069 2554062 ID=Msa0096830-mRNA-1:exon:673;Parent=Msa0096830-mRNA-1
chr1_3 exon 2554502 2555022 2554502 ID=Msa0096830-mRNA-1:exon:674;Parent=Msa0096830-mRNA-1
chr1_3 five_prime_UTR 2550204 2550357 2550204 ID=Msa0096830-mRNA-1:five_prime_utr;Parent=Msa0096830-mRNA-1
chr1_3 CDS 2550358 2550585 2550358 ID=Msa0096830-mRNA-1:cds;Parent=Msa0096830-mRNA-1
chr1_3 CDS 2551453 2551458 2551453 ID=Msa0096830-mRNA-1:cds;Parent=Msa0096830-mRNA-1
chr1_3 CDS 2551617 2551712 2551617 ID=Msa0096830-mRNA-1:cds;Parent=Msa0096830-mRNA-1
chr1_3 CDS 2552023 2552106 2552023 ID=Msa0096830-mRNA-1:cds;Parent=Msa0096830-mRNA-1
chr1_3 CDS 2552269 2552429 2552269 ID=Msa0096830-mRNA-1:cds;Parent=Msa0096830-mRNA-1
chr1_3 CDS 2552568 2552576 2552568 ID=Msa0096830-mRNA-1:cds;Parent=Msa0096830-mRNA-1
chr1_3 CDS 2552667 2552784 2552667 ID=Msa0096830-mRNA-1:cds;Parent=Msa0096830-mRNA-1
chr1_3 CDS 2553156 2553291 2553156 ID=Msa0096830-mRNA-1:cds;Parent=Msa0096830-mRNA-1
chr1_3 CDS 2554062 2554069 2554062 ID=Msa0096830-mRNA-1:cds;Parent=Msa0096830-mRNA-1
chr1_3 CDS 2554502 2554741 2554502 ID=Msa0096830-mRNA-1:cds;Parent=Msa0096830-mRNA-1
chr1_3 three_prime_UTR 2554742 2555022 2554742 ID=Msa0096830-mRNA-1:three_prime_utr;Parent=Msa0096830-mRNA-1
Gene Sequence

>Msa0096830

ATGGCCGGTGTCTGCTCTTTCTCCTCCGACGTTGTTGCCATTTCTCATTCTCTCACACAATCACTGTCTCTCAACAATACTACACTTTCAACAACAAGTAGAAGAAGATGCATTTTGAGGAGGACGAGAACTGTGAGGCCTCTTGTTTGTGCCGCCATCAACAATCCATTGCAGTACCGGAAACTTGGTGACTCTGATCTTAATATCAGTGAAATCACTCTTGGTACTGGTAAAATGACCTTTGGGGAGCAAAACACAGAAAAAGAATCTCATGACATACTCAATTATGCATTCGAGAACGGCATTAATGCTCTTGATACTGCTGAGGCTTACCCGATTCCAATGAAGAAAGAGACACAAGGAAAAACTGATCTCTATATAGCTAGCTGGCTGAAATCTCAATCTCGTGACAAGATTATAATAGCAACAAAAGTTTGCGGTTATTCTGAGAGATCGAGTTACTTACGGGACAATGCAGACATTTTGCGGGTTGATGCGACAAATATCAAAGAAAGTGTGGAGAAAAGTCTTAAGCGTCTCGGGACTGATTATATTGATTTGTTGCAAATTCATTGGAATCATAAGCCAGATCGCTACGTTGCATTGTTTGGTGAATATTCCTATGATCCTTCAAAATGGAGGCCTAGTGTGCCGTTTGTTGAACAGTTGCAAGCTTTTCAAGAACTTATCAATGAAGGAAAGGTACGTTACATAGGTGTTTCAAATGAGACTTCATATGGAGTGATGGAATTCGTCCATGCAGCTAAAGTTGAGGGACTTCCAAAGATTGTCAGTATCCAGAACAGCTATAGCTTGCTTGTAAGAAGTCGTTTTGAAGTTGATCTCGAAGCAACTATTAAGTATCTTGAGTTGGCCAAGAAACATGGTTTAACTCCTGTTCAGCTCGCGCTTGGATTTGTGAGAGATCGTCCATTCATGGCGAGTTCAATTATCGGTGCAACATCTGTGGACCAACTAAAAGAAGACATTGATGCTTTTACAACAACTGAACGGCCTTTACCAGCAGAAGTCATGACAGGAATTGAAGCTATCTTCAAGAGATACAAAGATCCTAGCATCCTTTAA

Protein sequence

>Msa0096830

MAGVCSFSSDVVAISHSLTQSLSLNNTTLSTTSRRRCILRRTRTVRPLVCAAINNPLQYRKLGDSDLNISEITLGTGKMTFGEQNTEKESHDILNYAFENGINALDTAEAYPIPMKKETQGKTDLYIASWLKSQSRDKIIIATKVCGYSERSSYLRDNADILRVDATNIKESVEKSLKRLGTDYIDLLQIHWNHKPDRYVALFGEYSYDPSKWRPSVPFVEQLQAFQELINEGKVRYIGVSNETSYGVMEFVHAAKVEGLPKIVSIQNSYSLLVRSRFEVDLEATIKYLELAKKHGLTPVQLALGFVRDRPFMASSIIGATSVDQLKEDIDAFTTTERPLPAEVMTGIEAIFKRYKDPSIL*