AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0016110


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0016110 MtrunA17_Chr1g0167421 82.014 417 14 3 1 356 1 417 0.0 675
Msa0016110 MtrunA17_Chr8g0380261 50.239 209 99 3 66 271 48 254 9.75e-68 218
Msa0016110 MtrunA17_Chr4g0005881 88.679 53 6 0 178 230 21 73 3.53e-30 110
Msa0016110 MtrunA17_Chr7g0274071 27.645 293 153 12 62 349 18 256 1.73e-14 73.9
Msa0016110 MtrunA17_Chr1g0204651 26.667 270 141 12 61 321 9 230 7.27e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0016110 AT1G04420.1 65.104 384 74 5 33 356 29 412 1.60e-173 489
Msa0016110 AT1G04690.1 27.426 237 136 6 57 292 1 202 5.56e-16 78.2
Msa0016110 AT1G60690.1 28.505 214 113 8 61 270 11 188 4.64e-11 63.9
Msa0016110 AT1G60710.1 27.907 215 113 8 61 270 11 188 6.28e-11 63.5

Find 80 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCCAATTTCTTTCAAATT+TGG 0.076575 1_1:-26830584 Msa0016110:three_prime_UTR
TTCCCAAATTTGAAAGAAAT+TGG 0.168927 1_1:+26830581 None:intergenic
CCTTGTGTCTCTTTCTTCAT+TGG 0.197248 1_1:+26833534 None:intergenic
TTCAAAGGTATAGTCTTTAA+AGG 0.245194 1_1:+26830833 None:intergenic
TTCCAATTTCTTTCAAATTT+GGG 0.263443 1_1:-26830583 Msa0016110:three_prime_UTR
GATCAGAGTCACCAAGTTTC+CGG 0.264903 1_1:+26835032 None:intergenic
CGTTATGCGGCCGTACAAAC+TGG 0.271337 1_1:-26830738 Msa0016110:three_prime_UTR
CAAGCAAGCTATAGCTGTTC+TGG 0.272185 1_1:+26832315 None:intergenic
TTCTGGATACTGACAATCTT+TGG 0.280723 1_1:+26832332 None:intergenic
GTCTCTTTCTTCATTGGAAT+CGG 0.294986 1_1:+26833540 None:intergenic
GATCGCTACGTTGCATTGTT+TGG 0.310293 1_1:-26832895 Msa0016110:CDS
CAATGTTTCAGATGACCTTT+GGG 0.314548 1_1:-26833960 Msa0016110:intron
AGGAGTTAAACCATGTTTCT+TGG 0.319091 1_1:+26831038 None:intergenic
ATTCCTATGATCCTTCAAAA+TGG 0.338544 1_1:-26832867 Msa0016110:CDS
AATCCAAGCGCGAGCTGAAC+AGG 0.376331 1_1:+26831018 None:intergenic
GCAATGTTTCAGATGACCTT+TGG 0.382335 1_1:-26833961 Msa0016110:intron
TTGTCATAACAAGTTAGTTT+TGG 0.387662 1_1:+26835363 None:intergenic
TGTGAGAGATCGTCCATTCA+TGG 0.397619 1_1:-26830995 Msa0016110:CDS
TTTCAAGAACTTATCAATGA+AGG 0.411788 1_1:-26832808 Msa0016110:CDS
TGAGAGATCGAGTTACTTAC+GGG 0.414574 1_1:-26833265 Msa0016110:CDS
CTGAGAGATCGAGTTACTTA+CGG 0.423724 1_1:-26833266 Msa0016110:CDS
ATAATTGAACTCGCCATGAA+TGG 0.430321 1_1:+26830982 None:intergenic
ACTCCTGTTCAGCTCGCGCT+TGG 0.430695 1_1:-26831021 Msa0016110:CDS
TTGATTTGTTGCAAATTCAT+TGG 0.436665 1_1:-26833158 Msa0016110:intron
CCATTGCAGTACCGGAAACT+TGG 0.436754 1_1:-26835043 Msa0016110:CDS
TTCATGGCGAGTTCAATTAT+CGG 0.446341 1_1:-26830979 Msa0016110:CDS
TCTCTTTCTTCATTGGAATC+GGG 0.450697 1_1:+26833541 None:intergenic
ATTCCTGTCATGACTTCTGC+TGG 0.463780 1_1:+26830892 None:intergenic
ATAATAGCAACAAAAGTTTG+CGG 0.464176 1_1:-26833294 Msa0016110:CDS
GTTTCAAATGAGACTTCATA+TGG 0.472814 1_1:-26832395 Msa0016110:CDS
AACAATGCAACGTAGCGATC+TGG 0.476923 1_1:+26832898 None:intergenic
AGAAAAGTCTTAAGCGTCTC+GGG 0.484155 1_1:-26833191 Msa0016110:CDS
TCAACAATCCATTGCAGTAC+CGG 0.485809 1_1:-26835051 Msa0016110:CDS
TATTCAATACCCAGTTTGTA+CGG 0.498226 1_1:+26830728 None:intergenic
CTGATCTCTATATAGCTAGC+TGG 0.502112 1_1:-26833506 Msa0016110:CDS
AATATCAGTGAAATCACTCT+TGG 0.502115 1_1:-26835007 Msa0016110:CDS
TGTTCAACAAACGGCACACT+AGG 0.508236 1_1:+26832841 None:intergenic
CTTGAGTTGGCCAAGAAACA+TGG 0.517065 1_1:-26831048 Msa0016110:CDS
CCAAGTTTCCGGTACTGCAA+TGG 0.518284 1_1:+26835043 None:intergenic
GTCATGACTTCTGCTGGTAA+AGG 0.518717 1_1:+26830898 None:intergenic
GTCCATGCAGCTAAAGTTGA+GGG 0.519118 1_1:-26832359 Msa0016110:CDS
TATAGTCTTTAAAGGATGCT+AGG 0.527210 1_1:+26830841 None:intergenic
ATATTCTTATATCAGTTCCA+TGG 0.527633 1_1:-26830801 Msa0016110:three_prime_UTR
CATTGACAAATAACTCAACA+TGG 0.528289 1_1:+26830703 None:intergenic
AACTATTAAGTATCTTGAGT+TGG 0.528848 1_1:-26831061 Msa0016110:CDS
GTTATGCGGCCGTACAAACT+GGG 0.534500 1_1:-26830737 Msa0016110:three_prime_UTR
CTCAATTATGCATTCGAGAA+CGG 0.534994 1_1:-26833904 Msa0016110:CDS
GCTTGCAACTGTTCAACAAA+CGG 0.537666 1_1:+26832832 None:intergenic
CTAACTTGTTATGACAAAAG+AGG 0.539684 1_1:-26835357 Msa0016110:five_prime_UTR
GTACTGCAATGGATTGTTGA+TGG 0.539963 1_1:+26835054 None:intergenic
GTCCCTCAACTTTAGCTGCA+TGG 0.544863 1_1:+26832357 None:intergenic
AGCTGCTAAGAAGCCATGGC+CGG 0.553641 1_1:-26835223 Msa0016110:exon
TTGTGTGAGAGAATGAGAAA+TGG 0.556485 1_1:+26835171 None:intergenic
ATTCAATATGTATCTATCCA+TGG 0.559972 1_1:+26830784 None:intergenic
AGAACTTATCAATGAAGGAA+AGG 0.566138 1_1:-26832803 Msa0016110:intron
ATGCATCAGGTACGTTACAT+AGG 0.569919 1_1:-26832419 Msa0016110:intron
TGAGACTTCATATGGAGTGA+TGG 0.573984 1_1:-26832387 Msa0016110:CDS
GAGAAAAGTCTTAAGCGTCT+CGG 0.577051 1_1:-26833192 Msa0016110:CDS
CGTCCATGCAGCTAAAGTTG+AGG 0.578730 1_1:-26832360 Msa0016110:CDS
GAAAGAGCAGACACCGGCCA+TGG 0.588039 1_1:+26835210 None:intergenic
GATGTGCACGAGTGTGGTGT+TGG 0.599619 1_1:-26835327 Msa0016110:five_prime_UTR
AATTATCGGTGCAACATCTG+TGG 0.606607 1_1:-26830965 Msa0016110:CDS
GATAAGCTGCTAAGAAGCCA+TGG 0.609538 1_1:-26835227 Msa0016110:exon
TTACCAGCAGAAGTCATGAC+AGG 0.613222 1_1:-26830895 Msa0016110:CDS
GACAAATATCAAAGAAAGTG+TGG 0.614604 1_1:-26833214 Msa0016110:CDS
CCTATGATCCTTCAAAATGG+AGG 0.632626 1_1:-26832864 Msa0016110:CDS
AGAAATGGCAACAACGTCGG+AGG 0.648860 1_1:+26835186 None:intergenic
TTGATGGCGGCACAAACAAG+AGG 0.649025 1_1:+26835070 None:intergenic
ATTGACAAATAACTCAACAT+GGG 0.663910 1_1:+26830704 None:intergenic
GAAATCTCAATCTCGTGACA+AGG 0.665936 1_1:-26833481 Msa0016110:intron
ATGAGAAATGGCAACAACGT+CGG 0.668018 1_1:+26835183 None:intergenic
GGAGGAGAAAGAGCAGACAC+CGG 0.670007 1_1:+26835204 None:intergenic
CCAATGAAGAAAGAGACACA+AGG 0.681685 1_1:-26833534 Msa0016110:CDS
AACAACGTGTTTGTATTGTG+TGG 0.687492 1_1:-26835258 Msa0016110:five_prime_UTR
AATGTTTCAGATGACCTTTG+GGG 0.691458 1_1:-26833959 Msa0016110:intron
TAATGCTCTTGATACTGCTG+AGG 0.693085 1_1:-26833878 Msa0016110:CDS
TGAGGAGGACGAGAACTGTG+AGG 0.703003 1_1:-26835093 Msa0016110:CDS
CTATAACAAACAATAAACAG+AGG 0.721790 1_1:-26835291 Msa0016110:five_prime_UTR
CTGCAATGGATTGTTGATGG+CGG 0.723159 1_1:+26835057 None:intergenic
GTACTTACGAAAACGTTATG+CGG 0.742006 1_1:-26830751 Msa0016110:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAATGTAAAGTAGA+AGG - chr1_1:26831683-26831702 Msa0016110:intron 15.0%
!! AAAAAAATAAATGAAGAGAA+TGG + chr1_1:26831778-26831797 None:intergenic 15.0%
!! ACCTATACATTTATATAAAA+GGG + chr1_1:26831857-26831876 None:intergenic 15.0%
!! AACCTATACATTTATATAAA+AGG + chr1_1:26831858-26831877 None:intergenic 15.0%
!! TAAAATTCAAGTATTTGAAT+TGG - chr1_1:26832152-26832171 Msa0016110:intron 15.0%
!!! AATGTGATTTTTATTGTATT+AGG - chr1_1:26832910-26832929 Msa0016110:intron 15.0%
!!! ATGTAATACTTTTAAAACTT+GGG + chr1_1:26833812-26833831 None:intergenic 15.0%
!!! AATGTAATACTTTTAAAACT+TGG + chr1_1:26833813-26833832 None:intergenic 15.0%
!!! TATTTTTGCAAATTTCTTAA+TGG + chr1_1:26834322-26834341 None:intergenic 15.0%
!! AATAAAGGAAAATTCTTAAT+TGG + chr1_1:26834824-26834843 None:intergenic 15.0%
!! AATTGATTATACTTGAAACT+AGG + chr1_1:26831244-26831263 None:intergenic 20.0%
!!! AAAATTGATTTCAACATGTT+TGG + chr1_1:26831299-26831318 None:intergenic 20.0%
!!! TTTTTGGAAAATTTGATACA+CGG + chr1_1:26831570-26831589 None:intergenic 20.0%
!!! CAAATTTTCCAAAAAATAGA+TGG - chr1_1:26831575-26831594 Msa0016110:intron 20.0%
!!! TCCCTTTTATATAAATGTAT+AGG - chr1_1:26831853-26831872 Msa0016110:intron 20.0%
!! TATTATAATCTATGCACAAA+GGG + chr1_1:26832622-26832641 None:intergenic 20.0%
!! TATGATGCTTATTACTTTAT+TGG - chr1_1:26832820-26832839 Msa0016110:CDS 20.0%
!! TAACTATTACTATAGATTGA+AGG + chr1_1:26833306-26833325 None:intergenic 20.0%
!!! TGTAATACTTTTAAAACTTG+GGG + chr1_1:26833811-26833830 None:intergenic 20.0%
!!! TTCCTTTATTTTTTCATGTT+TGG - chr1_1:26834834-26834853 Msa0016110:intron 20.0%
!! AACCAAACATGAAAAAATAA+AGG + chr1_1:26834839-26834858 None:intergenic 20.0%
!! TTCCAATTTCTTTCAAATTT+GGG - chr1_1:26835347-26835366 Msa0016110:five_prime_UTR 20.0%
! CTATAACAAACAATAAACAG+AGG - chr1_1:26830639-26830658 Msa0016110:three_prime_UTR 25.0%
!! GTTTCAAGTATAATCAATTC+TGG - chr1_1:26831245-26831264 Msa0016110:intron 25.0%
! TGAACATAAGTTTATAAGTG+GGG + chr1_1:26831620-26831639 None:intergenic 25.0%
! CTGAACATAAGTTTATAAGT+GGG + chr1_1:26831621-26831640 None:intergenic 25.0%
! AAACAGACTAATAATCATGA+TGG + chr1_1:26832240-26832259 None:intergenic 25.0%
!! TAAATCTCAATTTAGCTTCA+GGG + chr1_1:26832524-26832543 None:intergenic 25.0%
!! GATTTAGATTTCAGTTGTTT+TGG - chr1_1:26832538-26832557 Msa0016110:intron 25.0%
! ATTATAATCTATGCACAAAG+GGG + chr1_1:26832621-26832640 None:intergenic 25.0%
! CTATTATAATCTATGCACAA+AGG + chr1_1:26832623-26832642 None:intergenic 25.0%
! ATAATAGCAACAAAAGTTTG+CGG - chr1_1:26832636-26832655 Msa0016110:intron 25.0%
!!! TTGATTTGTTGCAAATTCAT+TGG - chr1_1:26832772-26832791 Msa0016110:intron 25.0%
!! TTTAAAACTTAAGTCAAGCA+TGG - chr1_1:26832877-26832896 Msa0016110:CDS 25.0%
!! TGATTTTCTGCTTTCATTAT+AGG - chr1_1:26833009-26833028 Msa0016110:intron 25.0%
! TTTCAAGAACTTATCAATGA+AGG - chr1_1:26833122-26833141 Msa0016110:intron 25.0%
! TAGAAAAGATAAAGCATGTT+AGG + chr1_1:26833162-26833181 None:intergenic 25.0%
! AACACGAATCATATACTATA+AGG + chr1_1:26833750-26833769 None:intergenic 25.0%
!!! TTTTTTATTTTGGACTCTCT+AGG + chr1_1:26833842-26833861 None:intergenic 25.0%
! TAGAGAGTCCAAAATAAAAA+AGG - chr1_1:26833841-26833860 Msa0016110:intron 25.0%
! ACAAATGATTACAGATAACA+TGG - chr1_1:26833940-26833959 Msa0016110:CDS 25.0%
! AACCATACACTAAAAGTTTA+CGG + chr1_1:26834186-26834205 None:intergenic 25.0%
!!! TAATTCGGTTTTGAAAAAGA+CGG + chr1_1:26834644-26834663 None:intergenic 25.0%
! TTATAATAACCAAACTGAAC+TGG + chr1_1:26834759-26834778 None:intergenic 25.0%
!!! TTTTTTCATGTTTGGTTTTC+AGG - chr1_1:26834842-26834861 Msa0016110:intron 25.0%
! AACTATTAAGTATCTTGAGT+TGG - chr1_1:26834869-26834888 Msa0016110:intron 25.0%
!! TTCAAAGGTATAGTCTTTAA+AGG + chr1_1:26835100-26835119 None:intergenic 25.0%
!! GACTATACCTTTGAATTTTT+CGG - chr1_1:26835105-26835124 Msa0016110:CDS 25.0%
!! ACTATACCTTTGAATTTTTC+GGG - chr1_1:26835106-26835125 Msa0016110:CDS 25.0%
! ATATTCTTATATCAGTTCCA+TGG - chr1_1:26835129-26835148 Msa0016110:CDS 25.0%
! ATTCAATATGTATCTATCCA+TGG + chr1_1:26835149-26835168 None:intergenic 25.0%
! ATTGACAAATAACTCAACAT+GGG + chr1_1:26835229-26835248 None:intergenic 25.0%
! GTTCCAATTTCTTTCAAATT+TGG - chr1_1:26835346-26835365 Msa0016110:five_prime_UTR 25.0%
! TTCCCAAATTTGAAAGAAAT+TGG + chr1_1:26835352-26835371 None:intergenic 25.0%
!! CTAACTTGTTATGACAAAAG+AGG - chr1_1:26830573-26830592 Msa0016110:three_prime_UTR 30.0%
AATATCAGTGAAATCACTCT+TGG - chr1_1:26830923-26830942 Msa0016110:CDS 30.0%
TTAGACAAGTTAGACTCAAT+AGG + chr1_1:26831044-26831063 None:intergenic 30.0%
!! TTAGTGCATGTTTTGTTCTA+TGG - chr1_1:26831065-26831084 Msa0016110:CDS 30.0%
CTTTACTTTCAACTCACTTT+CGG + chr1_1:26831135-26831154 None:intergenic 30.0%
! TACACCTCCAGAATTAATTT+TGG - chr1_1:26831318-26831337 Msa0016110:intron 30.0%
! ACACCTCCAGAATTAATTTT+GGG - chr1_1:26831319-26831338 Msa0016110:intron 30.0%
!!! CATGCTGGTTTTTTGTTTTA+AGG + chr1_1:26831380-26831399 None:intergenic 30.0%
! AGTTTTACTCTGACTTCAAT+TGG - chr1_1:26831494-26831513 Msa0016110:intron 30.0%
! GTTTTACTCTGACTTCAATT+GGG - chr1_1:26831495-26831514 Msa0016110:intron 30.0%
!!! CTTACAAGCCATCTATTTTT+TGG + chr1_1:26831586-26831605 None:intergenic 30.0%
! CAAAAAATAGATGGCTTGTA+AGG - chr1_1:26831584-26831603 Msa0016110:intron 30.0%
CCTGAACATAAGTTTATAAG+TGG + chr1_1:26831622-26831641 None:intergenic 30.0%
CCACTTATAAACTTATGTTC+AGG - chr1_1:26831619-26831638 Msa0016110:intron 30.0%
AATCAAGATTGTTAAAGTCC+CGG + chr1_1:26831660-26831679 None:intergenic 30.0%
! TGACAAGGTATTAGTTATTC+AGG - chr1_1:26832464-26832483 Msa0016110:intron 30.0%
GTATTAGTTATTCAGGAGTT+TGG - chr1_1:26832471-26832490 Msa0016110:intron 30.0%
! CTAAATCTCAATTTAGCTTC+AGG + chr1_1:26832525-26832544 None:intergenic 30.0%
TTATAATCTATGCACAAAGG+GGG + chr1_1:26832620-26832639 None:intergenic 30.0%
GACAAATATCAAAGAAAGTG+TGG - chr1_1:26832716-26832735 Msa0016110:intron 30.0%
! ATTTGTTGCAAATTCATTGG+TGG - chr1_1:26832775-26832794 Msa0016110:intron 30.0%
TTTGTTGCAAATTCATTGGT+GGG - chr1_1:26832776-26832795 Msa0016110:intron 30.0%
GATGCTTATTACTTTATTGG+TGG - chr1_1:26832823-26832842 Msa0016110:CDS 30.0%
!! GTTCAAAAACAATTTTAGCC+TGG + chr1_1:26832965-26832984 None:intergenic 30.0%
ATTCCTATGATCCTTCAAAA+TGG - chr1_1:26833063-26833082 Msa0016110:intron 30.0%
AGAACTTATCAATGAAGGAA+AGG - chr1_1:26833127-26833146 Msa0016110:intron 30.0%
AGATAAAGCATGTTAGGAAT+AGG + chr1_1:26833156-26833175 None:intergenic 30.0%
TCAAAGACTTATGAATCACA+AGG + chr1_1:26833398-26833417 None:intergenic 30.0%
AGTTTATGCTAATTGATGTG+TGG + chr1_1:26833441-26833460 None:intergenic 30.0%
!! TTTGTATTTTTGCATGCATC+AGG - chr1_1:26833498-26833517 Msa0016110:CDS 30.0%
GTTTCAAATGAGACTTCATA+TGG - chr1_1:26833535-26833554 Msa0016110:CDS 30.0%
ATCACTTAATTCTGTATTGC+TGG - chr1_1:26833700-26833719 Msa0016110:intron 30.0%
TCATATACTATAAGGACAAC+AGG + chr1_1:26833742-26833761 None:intergenic 30.0%
!!! CAGGAAAGCCTTTTTTATTT+TGG + chr1_1:26833852-26833871 None:intergenic 30.0%
GATTACAGATAACATGGTTT+AGG - chr1_1:26833946-26833965 Msa0016110:CDS 30.0%
TCTCACAATCAGCAATTTAT+AGG - chr1_1:26834045-26834064 Msa0016110:intron 30.0%
TCCAATTTATCCTTCAAACA+TGG - chr1_1:26834107-26834126 Msa0016110:intron 30.0%
CCAATTTATCCTTCAAACAT+GGG - chr1_1:26834108-26834127 Msa0016110:intron 30.0%
GATCATATTCATATGCACTT+TGG - chr1_1:26834130-26834149 Msa0016110:intron 30.0%
!!! TTGGACGTTTTTGAAGTTTA+AGG + chr1_1:26834157-26834176 None:intergenic 30.0%
TAAAAGTTTACGGATCACAT+TGG + chr1_1:26834176-26834195 None:intergenic 30.0%
! ATCCGTAAACTTTTAGTGTA+TGG - chr1_1:26834181-26834200 Msa0016110:intron 30.0%
!! AATTCTAAAGCTGCAAAAAG+TGG - chr1_1:26834525-26834544 Msa0016110:intron 30.0%
GATATAACCAATCACTTTCA+CGG - chr1_1:26834580-26834599 Msa0016110:intron 30.0%
ATATAACCAATCACTTTCAC+GGG - chr1_1:26834581-26834600 Msa0016110:intron 30.0%
TTCAATGACTTTAAACCACT+CGG - chr1_1:26834695-26834714 Msa0016110:intron 30.0%
TTATTTGAGCAGTTCAATTG+CGG + chr1_1:26834727-26834746 None:intergenic 30.0%
CAGTTTGGTTATTATAACAC+TGG - chr1_1:26834762-26834781 Msa0016110:intron 30.0%
ATTGGTTATCTTGTTAACCA+TGG + chr1_1:26834806-26834825 None:intergenic 30.0%
! CATCAATGTCTTCTTTTAGT+TGG + chr1_1:26834992-26835011 None:intergenic 30.0%
! ATGCTTTTACAACAACTGAA+CGG - chr1_1:26835009-26835028 Msa0016110:CDS 30.0%
! TATAGTCTTTAAAGGATGCT+AGG + chr1_1:26835092-26835111 None:intergenic 30.0%
GAATATCCCGAAAAATTCAA+AGG + chr1_1:26835115-26835134 None:intergenic 30.0%
TATTCAATACCCAGTTTGTA+CGG + chr1_1:26835205-26835224 None:intergenic 30.0%
CATTGACAAATAACTCAACA+TGG + chr1_1:26835230-26835249 None:intergenic 30.0%
AACAACGTGTTTGTATTGTG+TGG - chr1_1:26830672-26830691 Msa0016110:three_prime_UTR 35.0%
TTGTGTGAGAGAATGAGAAA+TGG + chr1_1:26830762-26830781 None:intergenic 35.0%
! GTAGAAGAAGATGCATTTTG+AGG - chr1_1:26830819-26830838 Msa0016110:three_prime_UTR 35.0%
!! TGTTTTGTTCCACTTCTAGA+GGG + chr1_1:26831345-26831364 None:intergenic 35.0%
!! TTGTTTTGTTCCACTTCTAG+AGG + chr1_1:26831346-26831365 None:intergenic 35.0%
GTGCTAACAATTCCTTTGTT+GGG - chr1_1:26831458-26831477 Msa0016110:intron 35.0%
! GTAGCATGTTGTTGATTGAT+TGG - chr1_1:26831945-26831964 Msa0016110:intron 35.0%
CAATGTTTCAGATGACCTTT+GGG - chr1_1:26831970-26831989 Msa0016110:intron 35.0%
AATGTTTCAGATGACCTTTG+GGG - chr1_1:26831971-26831990 Msa0016110:intron 35.0%
CTCAATTATGCATTCGAGAA+CGG - chr1_1:26832026-26832045 Msa0016110:intron 35.0%
GTGAAAATGAGATGGAATGA+AGG + chr1_1:26832109-26832128 None:intergenic 35.0%
GTACAAGTGTGAAAATGAGA+TGG + chr1_1:26832117-26832136 None:intergenic 35.0%
TCTCTTTCTTCATTGGAATC+GGG + chr1_1:26832392-26832411 None:intergenic 35.0%
GTCTCTTTCTTCATTGGAAT+CGG + chr1_1:26832393-26832412 None:intergenic 35.0%
! AGAAATAGTGATGATGAACC+AGG - chr1_1:26832944-26832963 Msa0016110:intron 35.0%
! AGCAAATACAAAGTACTCCT+CGG + chr1_1:26833234-26833253 None:intergenic 35.0%
TCACATACACATGTACAAGA+AGG + chr1_1:26833469-26833488 None:intergenic 35.0%
TTCTGGATACTGACAATCTT+TGG + chr1_1:26833601-26833620 None:intergenic 35.0%
!! CTTGTAAGAAGTCGTTTTGA+AGG - chr1_1:26833634-26833653 Msa0016110:intron 35.0%
CCAAGTATTCAAAGATCTAC+AGG + chr1_1:26833871-26833890 None:intergenic 35.0%
CCTGTAGATCTTTGAATACT+TGG - chr1_1:26833868-26833887 Msa0016110:intron 35.0%
!!! TTTAGGATTTTAGTTGCCAG+AGG - chr1_1:26833963-26833982 Msa0016110:intron 35.0%
CCCATGTTTGAAGGATAAAT+TGG + chr1_1:26834111-26834130 None:intergenic 35.0%
GAATATGATCCCATGTTTGA+AGG + chr1_1:26834120-26834139 None:intergenic 35.0%
AGCTTCTTCATGTTCTTAGT+TGG - chr1_1:26834387-26834406 Msa0016110:intron 35.0%
CAATGTTGCAATTCTTTGGA+TGG + chr1_1:26834448-26834467 None:intergenic 35.0%
CATCCAAAGAATTGCAACAT+TGG - chr1_1:26834446-26834465 Msa0016110:intron 35.0%
AAGCCAATGTTGCAATTCTT+TGG + chr1_1:26834452-26834471 None:intergenic 35.0%
TATATCTTTCCATGTAGCCA+GGG + chr1_1:26834566-26834585 None:intergenic 35.0%
TTATATCTTTCCATGTAGCC+AGG + chr1_1:26834567-26834586 None:intergenic 35.0%
AATAACCAAACTGAACTGGA+TGG + chr1_1:26834755-26834774 None:intergenic 35.0%
! GTTAACCATGGTTTAGAGTA+TGG + chr1_1:26834794-26834813 None:intergenic 35.0%
AGGAGTTAAACCATGTTTCT+TGG + chr1_1:26834895-26834914 None:intergenic 35.0%
ATAATTGAACTCGCCATGAA+TGG + chr1_1:26834951-26834970 None:intergenic 35.0%
TTCATGGCGAGTTCAATTAT+CGG - chr1_1:26834951-26834970 Msa0016110:intron 35.0%
GTACTTACGAAAACGTTATG+CGG - chr1_1:26835179-26835198 Msa0016110:CDS 35.0%
ATGAGAAATGGCAACAACGT+CGG + chr1_1:26830750-26830769 None:intergenic 40.0%
!! GAAGAAGATGCATTTTGAGG+AGG - chr1_1:26830822-26830841 Msa0016110:three_prime_UTR 40.0%
!! GTACTGCAATGGATTGTTGA+TGG + chr1_1:26830879-26830898 None:intergenic 40.0%
TCAACAATCCATTGCAGTAC+CGG - chr1_1:26830879-26830898 Msa0016110:CDS 40.0%
AGAGGGCCCAAAATTAATTC+TGG + chr1_1:26831328-26831347 None:intergenic 40.0%
AAAAAACCAGCATGTAACCC+AGG - chr1_1:26831386-26831405 Msa0016110:intron 40.0%
AAAAACCAGCATGTAACCCA+GGG - chr1_1:26831387-26831406 Msa0016110:intron 40.0%
TTCGAACTTGACACCTAAAG+AGG + chr1_1:26831430-26831449 None:intergenic 40.0%
AAAGGAATTGTTAGCACCTG+GGG + chr1_1:26831455-26831474 None:intergenic 40.0%
CAAAGGAATTGTTAGCACCT+GGG + chr1_1:26831456-26831475 None:intergenic 40.0%
ACAAAGGAATTGTTAGCACC+TGG + chr1_1:26831457-26831476 None:intergenic 40.0%
GGTGCTAACAATTCCTTTGT+TGG - chr1_1:26831457-26831476 Msa0016110:intron 40.0%
TATATGAACTCGCCCAACAA+AGG + chr1_1:26831473-26831492 None:intergenic 40.0%
! AATAGATGGCTTGTAAGGTG+AGG - chr1_1:26831589-26831608 Msa0016110:intron 40.0%
GCAATGTTTCAGATGACCTT+TGG - chr1_1:26831969-26831988 Msa0016110:intron 40.0%
TAATGCTCTTGATACTGCTG+AGG - chr1_1:26832052-26832071 Msa0016110:intron 40.0%
AGTTGTGTGTAGGGATAACT+TGG + chr1_1:26832289-26832308 None:intergenic 40.0%
GATTGCAAGAGTTGTGTGTA+GGG + chr1_1:26832298-26832317 None:intergenic 40.0%
AGATTGCAAGAGTTGTGTGT+AGG + chr1_1:26832299-26832318 None:intergenic 40.0%
CCTTGTGTCTCTTTCTTCAT+TGG + chr1_1:26832399-26832418 None:intergenic 40.0%
CCAATGAAGAAAGAGACACA+AGG - chr1_1:26832396-26832415 Msa0016110:CDS 40.0%
CTGATCTCTATATAGCTAGC+TGG - chr1_1:26832424-26832443 Msa0016110:intron 40.0%
GAAATCTCAATCTCGTGACA+AGG - chr1_1:26832449-26832468 Msa0016110:intron 40.0%
CTGAGAGATCGAGTTACTTA+CGG - chr1_1:26832664-26832683 Msa0016110:intron 40.0%
TGAGAGATCGAGTTACTTAC+GGG - chr1_1:26832665-26832684 Msa0016110:intron 40.0%
GAGAAAAGTCTTAAGCGTCT+CGG - chr1_1:26832738-26832757 Msa0016110:intron 40.0%
AGAAAAGTCTTAAGCGTCTC+GGG - chr1_1:26832739-26832758 Msa0016110:intron 40.0%
!! CCTCCATTTTGAAGGATCAT+AGG + chr1_1:26833069-26833088 None:intergenic 40.0%
CCTATGATCCTTCAAAATGG+AGG - chr1_1:26833066-26833085 Msa0016110:intron 40.0%
GCTTGCAACTGTTCAACAAA+CGG + chr1_1:26833101-26833120 None:intergenic 40.0%
ATGCATCAGGTACGTTACAT+AGG - chr1_1:26833511-26833530 Msa0016110:CDS 40.0%
TGAGACTTCATATGGAGTGA+TGG - chr1_1:26833543-26833562 Msa0016110:CDS 40.0%
! AGTACAGTTCTTTTCTGACG+TGG - chr1_1:26833659-26833678 Msa0016110:intron 40.0%
TTGAAGGTGGCAAGAGAAAT+AGG - chr1_1:26833993-26834012 Msa0016110:intron 40.0%
!! GCATACATTCTCCTGCTTTT+GGG - chr1_1:26834067-26834086 Msa0016110:intron 40.0%
!! CATACATTCTCCTGCTTTTG+GGG - chr1_1:26834068-26834087 Msa0016110:intron 40.0%
GCTAAAAATTCCCCAAAAGC+AGG + chr1_1:26834081-26834100 None:intergenic 40.0%
ATTTACCCCACTCCAAGTTA+GGG + chr1_1:26834289-26834308 None:intergenic 40.0%
AATTTACCCCACTCCAAGTT+AGG + chr1_1:26834290-26834309 None:intergenic 40.0%
ACTTCACATCCGCTAACTTA+GGG + chr1_1:26834363-26834382 None:intergenic 40.0%
AACTTCACATCCGCTAACTT+AGG + chr1_1:26834364-26834383 None:intergenic 40.0%
!! TGTTTTTGCAGTTGATCTCG+TGG - chr1_1:26834415-26834434 Msa0016110:intron 40.0%
TTCTTACCCGTGAAAGTGAT+TGG + chr1_1:26834590-26834609 None:intergenic 40.0%
TGCTGGTACGATGTCTAATT+CGG + chr1_1:26834659-26834678 None:intergenic 40.0%
TCAGACCATACTCTAAACCA+TGG - chr1_1:26834786-26834805 Msa0016110:intron 40.0%
AATTATCGGTGCAACATCTG+TGG - chr1_1:26834965-26834984 Msa0016110:intron 40.0%
AAAAACGATGTGCACGAGTG+TGG - chr1_1:26830597-26830616 Msa0016110:three_prime_UTR 45.0%
GATAAGCTGCTAAGAAGCCA+TGG - chr1_1:26830703-26830722 Msa0016110:three_prime_UTR 45.0%
!! CTGCAATGGATTGTTGATGG+CGG + chr1_1:26830876-26830895 None:intergenic 45.0%
GATCAGAGTCACCAAGTTTC+CGG + chr1_1:26830901-26830920 None:intergenic 45.0%
GGGCCCAAAATTAATTCTGG+AGG + chr1_1:26831325-26831344 None:intergenic 45.0%
!! AATTTTGGGCCCTCTAGAAG+TGG - chr1_1:26831333-26831352 Msa0016110:intron 45.0%
! ACCTAAAGAGGCATACTCCT+AGG + chr1_1:26831418-26831437 None:intergenic 45.0%
AAGGAATTGTTAGCACCTGG+GGG + chr1_1:26831454-26831473 None:intergenic 45.0%
AATCCTATCATCCACTAGCG+AGG + chr1_1:26831521-26831540 None:intergenic 45.0%
! TCGCTAGTGGATGATAGGAT+TGG - chr1_1:26831520-26831539 Msa0016110:intron 45.0%
! TCCTCTGACTAGTCGGTTAT+TGG - chr1_1:26831543-26831562 Msa0016110:intron 45.0%
! TCCAATAACCGACTAGTCAG+AGG + chr1_1:26831547-26831566 None:intergenic 45.0%
CAGGTCAGTCTCATTCAATC+CGG - chr1_1:26831638-26831657 Msa0016110:intron 45.0%
AGGTCAGTCTCATTCAATCC+GGG - chr1_1:26831639-26831658 Msa0016110:intron 45.0%
! TTCTGTGTTTTGCTCCCCAA+AGG + chr1_1:26831988-26832007 None:intergenic 45.0%
! GGGACAATGCAGACATTTTG+CGG - chr1_1:26832685-26832704 Msa0016110:intron 45.0%
! GGACAATGCAGACATTTTGC+GGG - chr1_1:26832686-26832705 Msa0016110:intron 45.0%
AACAATGCAACGTAGCGATC+TGG + chr1_1:26833035-26833054 None:intergenic 45.0%
GATCGCTACGTTGCATTGTT+TGG - chr1_1:26833035-26833054 Msa0016110:intron 45.0%
! ACACTAGGCCTCCATTTTGA+AGG + chr1_1:26833077-26833096 None:intergenic 45.0%
TGTTCAACAAACGGCACACT+AGG + chr1_1:26833092-26833111 None:intergenic 45.0%
!!! GTTTTGACTTAGAGAAGCCG+AGG - chr1_1:26833214-26833233 Msa0016110:CDS 45.0%
GTCCATGCAGCTAAAGTTGA+GGG - chr1_1:26833571-26833590 Msa0016110:intron 45.0%
CAAGCAAGCTATAGCTGTTC+TGG + chr1_1:26833618-26833637 None:intergenic 45.0%
!! TTTTAGTTGCCAGAGGTGCA+AGG - chr1_1:26833970-26833989 Msa0016110:intron 45.0%
! GGCATACATTCTCCTGCTTT+TGG - chr1_1:26834066-26834085 Msa0016110:intron 45.0%
AGTCCAGTTGAACCCTAACT+TGG - chr1_1:26834274-26834293 Msa0016110:intron 45.0%
ACTCCAAGTTAGGGTTCAAC+TGG + chr1_1:26834280-26834299 None:intergenic 45.0%
AGTTGAACCCTAACTTGGAG+TGG - chr1_1:26834279-26834298 Msa0016110:intron 45.0%
GTTGAACCCTAACTTGGAGT+GGG - chr1_1:26834280-26834299 Msa0016110:intron 45.0%
TTGAACCCTAACTTGGAGTG+GGG - chr1_1:26834281-26834300 Msa0016110:intron 45.0%
TTGCTATCCTATTCCCCACT+AGG - chr1_1:26834470-26834489 Msa0016110:intron 45.0%
ATCGTACCAGCATGACTTCT+GGG - chr1_1:26834667-26834686 Msa0016110:intron 45.0%
CTGAACCATCCAGTTCAGTT+TGG - chr1_1:26834747-26834766 Msa0016110:intron 45.0%
!! CTTGAGTTGGCCAAGAAACA+TGG - chr1_1:26834882-26834901 Msa0016110:intron 45.0%
TGTGAGAGATCGTCCATTCA+TGG - chr1_1:26834935-26834954 Msa0016110:intron 45.0%
GTCATGACTTCTGCTGGTAA+AGG + chr1_1:26835035-26835054 None:intergenic 45.0%
TTACCAGCAGAAGTCATGAC+AGG - chr1_1:26835035-26835054 Msa0016110:CDS 45.0%
ATTCCTGTCATGACTTCTGC+TGG + chr1_1:26835041-26835060 None:intergenic 45.0%
!!! TTTATTTGAAATTATTATTA+AGG - chr1_1:26831795-26831814 Msa0016110:intron 5.0%
!!! TTATTTGAAATTATTATTAA+GGG - chr1_1:26831796-26831815 Msa0016110:intron 5.0%
AGAAATGGCAACAACGTCGG+AGG + chr1_1:26830747-26830766 None:intergenic 50.0%
!! TTGATGGCGGCACAAACAAG+AGG + chr1_1:26830863-26830882 None:intergenic 50.0%
CCAAGTTTCCGGTACTGCAA+TGG + chr1_1:26830890-26830909 None:intergenic 50.0%
! CCATTGCAGTACCGGAAACT+TGG - chr1_1:26830887-26830906 Msa0016110:CDS 50.0%
ATACTCCTAGGCCAATCCCT+GGG + chr1_1:26831406-26831425 None:intergenic 50.0%
! GCCTAGGAGTATGCCTCTTT+AGG - chr1_1:26831414-26831433 Msa0016110:intron 50.0%
!! GGATTGGTCCTCTGACTAGT+CGG - chr1_1:26831536-26831555 Msa0016110:intron 50.0%
CGTCCATGCAGCTAAAGTTG+AGG - chr1_1:26833570-26833589 Msa0016110:intron 50.0%
GTCCCTCAACTTTAGCTGCA+TGG + chr1_1:26833576-26833595 None:intergenic 50.0%
GCACCATGACCCTAAGTTAG+CGG - chr1_1:26834351-26834370 Msa0016110:intron 50.0%
CATCCGCTAACTTAGGGTCA+TGG + chr1_1:26834357-26834376 None:intergenic 50.0%
CTATCCTATTCCCCACTAGG+CGG - chr1_1:26834473-26834492 Msa0016110:intron 50.0%
GGAAGACTGAATCTCTTCCC+TGG - chr1_1:26834546-26834565 Msa0016110:intron 50.0%
GAATCTCTTCCCTGGCTACA+TGG - chr1_1:26834554-26834573 Msa0016110:intron 50.0%
CATCGTACCAGCATGACTTC+TGG - chr1_1:26834666-26834685 Msa0016110:intron 50.0%
!! CAATTGCGGTTTTGTCCGAG+TGG + chr1_1:26834713-26834732 None:intergenic 50.0%
GTTATGCGGCCGTACAAACT+GGG - chr1_1:26835193-26835212 Msa0016110:CDS 50.0%
GATGTGCACGAGTGTGGTGT+TGG - chr1_1:26830603-26830622 Msa0016110:three_prime_UTR 55.0%
AGCTGCTAAGAAGCCATGGC+CGG - chr1_1:26830707-26830726 Msa0016110:three_prime_UTR 55.0%
GGAGGAGAAAGAGCAGACAC+CGG + chr1_1:26830729-26830748 None:intergenic 55.0%
TGAGGAGGACGAGAACTGTG+AGG - chr1_1:26830837-26830856 Msa0016110:exon 55.0%
CCAATCCCTGGGTTACATGC+TGG + chr1_1:26831395-26831414 None:intergenic 55.0%
CCAGCATGTAACCCAGGGAT+TGG - chr1_1:26831392-26831411 Msa0016110:intron 55.0%
!! TGTAACCCAGGGATTGGCCT+AGG - chr1_1:26831398-26831417 Msa0016110:intron 55.0%
CATACTCCTAGGCCAATCCC+TGG + chr1_1:26831407-26831426 None:intergenic 55.0%
GTGTCAAGTTCGAATCCCCC+AGG - chr1_1:26831436-26831455 Msa0016110:intron 55.0%
CTTCAATTGGGCCTCGCTAG+TGG - chr1_1:26831507-26831526 Msa0016110:intron 55.0%
! TGCCAGAGGTGCAAGGTTGA+AGG - chr1_1:26833977-26833996 Msa0016110:intron 55.0%
CACCTTCAACCTTGCACCTC+TGG + chr1_1:26833982-26834001 None:intergenic 55.0%
! CAGAGGTGCAAGGTTGAAGG+TGG - chr1_1:26833980-26833999 Msa0016110:intron 55.0%
ACCAGCATGACTTCTGGGTC+AGG - chr1_1:26834672-26834691 Msa0016110:intron 55.0%
ACCTGACCCAGAAGTCATGC+TGG + chr1_1:26834676-26834695 None:intergenic 55.0%
AATCCAAGCGCGAGCTGAAC+AGG + chr1_1:26834915-26834934 None:intergenic 55.0%
CGTTATGCGGCCGTACAAAC+TGG - chr1_1:26835192-26835211 Msa0016110:CDS 55.0%
GAAAGAGCAGACACCGGCCA+TGG + chr1_1:26830723-26830742 None:intergenic 60.0%
! GGGCCTCGCTAGTGGATGAT+AGG - chr1_1:26831515-26831534 Msa0016110:intron 60.0%
TCCTATTCCCCACTAGGCGG+CGG - chr1_1:26834476-26834495 Msa0016110:intron 60.0%
! AGAGTGTTCCGCCGCCTAGT+GGG + chr1_1:26834487-26834506 None:intergenic 60.0%
ACTCCTGTTCAGCTCGCGCT+TGG - chr1_1:26834909-26834928 Msa0016110:intron 60.0%
TCCGCCGCCTAGTGGGGAAT+AGG + chr1_1:26834480-26834499 None:intergenic 65.0%
GAGTGTTCCGCCGCCTAGTG+GGG + chr1_1:26834486-26834505 None:intergenic 65.0%
!! GAGAGTGTTCCGCCGCCTAG+TGG + chr1_1:26834488-26834507 None:intergenic 65.0%
CTAGGCGGCGGAACACTCTC+TGG - chr1_1:26834488-26834507 Msa0016110:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 26830568 26835384 26830568 ID=Msa0016110;Name=Msa0016110
chr1_1 mRNA 26830568 26835384 26830568 ID=Msa0016110-mRNA-1;Parent=Msa0016110;Name=Msa0016110-mRNA-1;_AED=0.16;_eAED=0.16;_QI=154|0.85|0.87|1|0.71|0.87|8|281|356
chr1_1 exon 26830568 26831088 26830568 ID=Msa0016110-mRNA-1:exon:8989;Parent=Msa0016110-mRNA-1
chr1_1 exon 26831519 26831526 26831519 ID=Msa0016110-mRNA-1:exon:8988;Parent=Msa0016110-mRNA-1
chr1_1 exon 26832297 26832432 26832297 ID=Msa0016110-mRNA-1:exon:8987;Parent=Msa0016110-mRNA-1
chr1_1 exon 26832804 26832921 26832804 ID=Msa0016110-mRNA-1:exon:8986;Parent=Msa0016110-mRNA-1
chr1_1 exon 26833159 26833319 26833159 ID=Msa0016110-mRNA-1:exon:8985;Parent=Msa0016110-mRNA-1
chr1_1 exon 26833482 26833565 26833482 ID=Msa0016110-mRNA-1:exon:8984;Parent=Msa0016110-mRNA-1
chr1_1 exon 26833876 26833971 26833876 ID=Msa0016110-mRNA-1:exon:8983;Parent=Msa0016110-mRNA-1
chr1_1 exon 26835003 26835384 26835003 ID=Msa0016110-mRNA-1:exon:8982;Parent=Msa0016110-mRNA-1
chr1_1 five_prime_UTR 26835231 26835384 26835231 ID=Msa0016110-mRNA-1:five_prime_utr;Parent=Msa0016110-mRNA-1
chr1_1 CDS 26835003 26835230 26835003 ID=Msa0016110-mRNA-1:cds;Parent=Msa0016110-mRNA-1
chr1_1 CDS 26833876 26833971 26833876 ID=Msa0016110-mRNA-1:cds;Parent=Msa0016110-mRNA-1
chr1_1 CDS 26833482 26833565 26833482 ID=Msa0016110-mRNA-1:cds;Parent=Msa0016110-mRNA-1
chr1_1 CDS 26833159 26833319 26833159 ID=Msa0016110-mRNA-1:cds;Parent=Msa0016110-mRNA-1
chr1_1 CDS 26832804 26832921 26832804 ID=Msa0016110-mRNA-1:cds;Parent=Msa0016110-mRNA-1
chr1_1 CDS 26832297 26832432 26832297 ID=Msa0016110-mRNA-1:cds;Parent=Msa0016110-mRNA-1
chr1_1 CDS 26831519 26831526 26831519 ID=Msa0016110-mRNA-1:cds;Parent=Msa0016110-mRNA-1
chr1_1 CDS 26830849 26831088 26830849 ID=Msa0016110-mRNA-1:cds;Parent=Msa0016110-mRNA-1
chr1_1 three_prime_UTR 26830568 26830848 26830568 ID=Msa0016110-mRNA-1:three_prime_utr;Parent=Msa0016110-mRNA-1
Gene Sequence

>Msa0016110

ATGGCCGGTGTCTGCTCTTTCTCCTCCGACGTTGTTGCCATTTCTCATTCTCTCACACAATCACTGTCTCTCAACAATACTACACTTTCAACAACAAGTAGAAGAAGATGCATTTTGAGGAGGACGAGAACTGTGAGGCCTCTTGTTTGTGCCGCCATCAACAATCCATTGCAGTACCGGAAACTTGGTGACTCTGATCTTAATATCAGTGAAATCACTCTTGGTACTATGACCTTTGGGGAGCAAAACACAGAAAAAGAATCTCATGACATACTCAATTATGCATTCGAGAACGGCATTAATGCTCTTGATACTGCTGAGGCTTACCCGATTCCAATGAAGAAAGAGACACAAGGAAAAACTGATCTCTATATAGCTAGCTGGCTGAAATCTCAATCTCGTGACAAGATTATAATAGCAACAAAAGTTTGCGGTTATTCTGAGAGATCGAGTTACTTACGGGACAATGCAGACATTTTGCGGGTTGATGCGACAAATATCAAAGAAAGTGTGGAGAAAAGTCTTAAGCGTCTCGGGACTGATTATATTGATTTGTTGCAAATTCATTGGCCAGATCGCTACGTTGCATTGTTTGGTGAATATTCCTATGATCCTTCAAAATGGAGGCCTAGTGTGCCGTTTGTTGAACAGTTGCAAGCTTTTCAAGAACTTATCAATGAAGGAAAGGTACGTTACATAGGTGTTTCAAATGAGACTTCATATGGAGTGATGGAATTCGTCCATGCAGCTAAAGTTGAGGGACTTCCAAAGATTGTCAGTATCCAGAACAGCTATAGCTTGCTTGTAAGAAGTCGTTTTGAAGTTGATCTCGAAGCAACTATTAAGTATCTTGAGTTGGCCAAGAAACATGGTTTAACTCCTGTTCAGCTCGCGCTTGGATTTGTGAGAGATCGTCCATTCATGGCGAGTTCAATTATCGGTGCAACATCTGTGGACCAACTAAAAGAAGACATTGATGCTTTTACAACAACTGAACGGCCTTTACCAGCAGAAGTCATGACAGGAATTGAAGCTATCTTCAAGAGATACAAAGATCCTAGCATCCTTTAA

Protein sequence

>Msa0016110

MAGVCSFSSDVVAISHSLTQSLSLNNTTLSTTSRRRCILRRTRTVRPLVCAAINNPLQYRKLGDSDLNISEITLGTMTFGEQNTEKESHDILNYAFENGINALDTAEAYPIPMKKETQGKTDLYIASWLKSQSRDKIIIATKVCGYSERSSYLRDNADILRVDATNIKESVEKSLKRLGTDYIDLLQIHWPDRYVALFGEYSYDPSKWRPSVPFVEQLQAFQELINEGKVRYIGVSNETSYGVMEFVHAAKVEGLPKIVSIQNSYSLLVRSRFEVDLEATIKYLELAKKHGLTPVQLALGFVRDRPFMASSIIGATSVDQLKEDIDAFTTTERPLPAEVMTGIEAIFKRYKDPSIL*