AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0002060


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0002060 MtrunA17_Chr1g0167421 81.043 422 14 5 1 361 1 417 0.0 663
Msa0002060 MtrunA17_Chr8g0380261 49.065 214 99 5 66 276 48 254 1.60e-63 207
Msa0002060 MtrunA17_Chr4g0005881 83.929 56 6 1 180 235 21 73 3.05e-28 105
Msa0002060 MtrunA17_Chr7g0274071 26.689 296 157 12 62 354 18 256 1.65e-14 73.9
Msa0002060 MtrunA17_Chr7g0274061 28.514 249 134 11 62 306 16 224 4.42e-13 69.7
Msa0002060 MtrunA17_Chr7g0274041 27.189 217 118 7 61 275 11 189 1.54e-12 67.8
Msa0002060 MtrunA17_Chr1g0204651 26.007 273 144 13 61 326 9 230 3.02e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0002060 AT1G04420.1 64.267 389 74 7 33 361 29 412 3.38e-169 478
Msa0002060 AT1G10810.2 26.923 260 143 11 61 317 11 226 1.31e-11 64.7
Msa0002060 AT1G60690.1 28.111 217 115 9 61 275 11 188 4.23e-11 63.9

Find 80 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCCAATTTCTTTCAAATT+TGG 0.076575 1_1:+3934301 Msa0002060:three_prime_UTR
TTCCCAAATTTGAAAGAAAT+TGG 0.168927 1_1:-3934304 None:intergenic
CCTTGTGTCTCTTTCTTCAT+TGG 0.197248 1_1:-3931349 None:intergenic
TTCAAAGGTATAGTCTTTAA+AGG 0.245194 1_1:-3934052 None:intergenic
TTCCAATTTCTTTCAAATTT+GGG 0.263443 1_1:+3934302 Msa0002060:three_prime_UTR
GATCAGAGTCACCAAGTTTC+CGG 0.264903 1_1:-3929851 None:intergenic
CGTTATGCGGCCGTACAAAC+TGG 0.271337 1_1:+3934147 Msa0002060:three_prime_UTR
CAAGCAAGCTATAGCTGTTC+TGG 0.272185 1_1:-3932568 None:intergenic
TTCTGGATACTGACAATCTT+TGG 0.280723 1_1:-3932551 None:intergenic
GTCTCTTTCTTCATTGGAAT+CGG 0.294986 1_1:-3931343 None:intergenic
GATCGCTACGTTGCATTGTT+TGG 0.310293 1_1:+3931988 Msa0002060:CDS
CAATGTTTCAGATGACCTTT+GGG 0.314548 1_1:+3930923 Msa0002060:intron
AGGAGTTAAACCATGTTTCT+TGG 0.319091 1_1:-3933847 None:intergenic
ATTCCTATGATCCTTCAAAA+TGG 0.338544 1_1:+3932016 Msa0002060:CDS
AATCCAAGCGCGAGCTGAAC+AGG 0.376331 1_1:-3933867 None:intergenic
GCAATGTTTCAGATGACCTT+TGG 0.382335 1_1:+3930922 Msa0002060:intron
TTGTCATAACAAGTTAGTTT+TGG 0.387662 1_1:-3929520 None:intergenic
TGTGAGAGATCGTCCATTCA+TGG 0.397619 1_1:+3933890 Msa0002060:CDS
TTTCAAGAACTTATCAATGA+AGG 0.411788 1_1:+3932075 Msa0002060:CDS
TGAGAGATCGAGTTACTTAC+GGG 0.414574 1_1:+3931618 Msa0002060:CDS
CTGAGAGATCGAGTTACTTA+CGG 0.423724 1_1:+3931617 Msa0002060:CDS
ATAATTGAACTCGCCATGAA+TGG 0.430321 1_1:-3933903 None:intergenic
ACTCCTGTTCAGCTCGCGCT+TGG 0.430695 1_1:+3933864 Msa0002060:CDS
TTGATTTGTTGCAAATTCAT+TGG 0.436665 1_1:+3931725 Msa0002060:CDS
CCATTGCAGTACCGGAAACT+TGG 0.436754 1_1:+3929840 Msa0002060:CDS
TTCATGGCGAGTTCAATTAT+CGG 0.446341 1_1:+3933906 Msa0002060:CDS
TCTCTTTCTTCATTGGAATC+GGG 0.450697 1_1:-3931342 None:intergenic
ATTCCTGTCATGACTTCTGC+TGG 0.463780 1_1:-3933993 None:intergenic
ATAATAGCAACAAAAGTTTG+CGG 0.464176 1_1:+3931589 Msa0002060:CDS
GTTTCAAATGAGACTTCATA+TGG 0.472814 1_1:+3932488 Msa0002060:CDS
AACAATGCAACGTAGCGATC+TGG 0.476923 1_1:-3931985 None:intergenic
AGAAAAGTCTTAAGCGTCTC+GGG 0.484155 1_1:+3931692 Msa0002060:CDS
TCAACAATCCATTGCAGTAC+CGG 0.485809 1_1:+3929832 Msa0002060:CDS
TATTCAATACCCAGTTTGTA+CGG 0.498226 1_1:-3934157 None:intergenic
CTGATCTCTATATAGCTAGC+TGG 0.502112 1_1:+3931377 Msa0002060:CDS
AATATCAGTGAAATCACTCT+TGG 0.502115 1_1:+3929876 Msa0002060:CDS
TGTTCAACAAACGGCACACT+AGG 0.508236 1_1:-3932042 None:intergenic
CTTGAGTTGGCCAAGAAACA+TGG 0.517065 1_1:+3933837 Msa0002060:CDS
CCAAGTTTCCGGTACTGCAA+TGG 0.518284 1_1:-3929840 None:intergenic
GTCATGACTTCTGCTGGTAA+AGG 0.518717 1_1:-3933987 None:intergenic
GTCCATGCAGCTAAAGTTGA+GGG 0.519118 1_1:+3932524 Msa0002060:CDS
TATAGTCTTTAAAGGATGCT+AGG 0.527210 1_1:-3934044 None:intergenic
ATATTCTTATATCAGTTCCA+TGG 0.527633 1_1:+3934084 Msa0002060:three_prime_UTR
CATTGACAAATAACTCAACA+TGG 0.528289 1_1:-3934182 None:intergenic
AACTATTAAGTATCTTGAGT+TGG 0.528848 1_1:+3933824 Msa0002060:CDS
GTTATGCGGCCGTACAAACT+GGG 0.534500 1_1:+3934148 Msa0002060:three_prime_UTR
CTCAATTATGCATTCGAGAA+CGG 0.534994 1_1:+3930979 Msa0002060:CDS
GCTTGCAACTGTTCAACAAA+CGG 0.537666 1_1:-3932051 None:intergenic
CTAACTTGTTATGACAAAAG+AGG 0.539684 1_1:+3929526 Msa0002060:five_prime_UTR
GTACTGCAATGGATTGTTGA+TGG 0.539963 1_1:-3929829 None:intergenic
GTCCCTCAACTTTAGCTGCA+TGG 0.544863 1_1:-3932526 None:intergenic
AGCTGCTAAGAAGCCATGGC+CGG 0.553641 1_1:+3929660 Msa0002060:exon
TTGTGTGAGAGAATGAGAAA+TGG 0.556485 1_1:-3929712 None:intergenic
ATTCAATATGTATCTATCCA+TGG 0.559972 1_1:-3934101 None:intergenic
AGAACTTATCAATGAAGGAA+AGG 0.566138 1_1:+3932080 Msa0002060:CDS
ATGCATCAGGTACGTTACAT+AGG 0.569919 1_1:+3932464 Msa0002060:intron
TGAGACTTCATATGGAGTGA+TGG 0.573984 1_1:+3932496 Msa0002060:CDS
GAGAAAAGTCTTAAGCGTCT+CGG 0.577051 1_1:+3931691 Msa0002060:CDS
CGTCCATGCAGCTAAAGTTG+AGG 0.578730 1_1:+3932523 Msa0002060:CDS
GAAAGAGCAGACACCGGCCA+TGG 0.588039 1_1:-3929673 None:intergenic
GATGTGCACGAGTGTGGTGT+TGG 0.599619 1_1:+3929556 Msa0002060:five_prime_UTR
AATTATCGGTGCAACATCTG+TGG 0.606607 1_1:+3933920 Msa0002060:CDS
GATAAGCTGCTAAGAAGCCA+TGG 0.609538 1_1:+3929656 Msa0002060:exon
TTACCAGCAGAAGTCATGAC+AGG 0.613222 1_1:+3933990 Msa0002060:CDS
GACAAATATCAAAGAAAGTG+TGG 0.614604 1_1:+3931669 Msa0002060:CDS
CCTATGATCCTTCAAAATGG+AGG 0.632626 1_1:+3932019 Msa0002060:CDS
AGAAATGGCAACAACGTCGG+AGG 0.648860 1_1:-3929697 None:intergenic
TTGATGGCGGCACAAACAAG+AGG 0.649025 1_1:-3929813 None:intergenic
ATTGACAAATAACTCAACAT+GGG 0.663910 1_1:-3934181 None:intergenic
GAAATCTCAATCTCGTGACA+AGG 0.665936 1_1:+3931402 Msa0002060:CDS
ATGAGAAATGGCAACAACGT+CGG 0.668018 1_1:-3929700 None:intergenic
GGAGGAGAAAGAGCAGACAC+CGG 0.670007 1_1:-3929679 None:intergenic
CCAATGAAGAAAGAGACACA+AGG 0.681685 1_1:+3931349 Msa0002060:CDS
AACAACGTGTTTGTATTGTG+TGG 0.687492 1_1:+3929625 Msa0002060:five_prime_UTR
AATGTTTCAGATGACCTTTG+GGG 0.691458 1_1:+3930924 Msa0002060:intron
TAATGCTCTTGATACTGCTG+AGG 0.693085 1_1:+3931005 Msa0002060:CDS
TGAGGAGGACGAGAACTGTG+AGG 0.703003 1_1:+3929790 Msa0002060:CDS
CTATAACAAACAATAAACAG+AGG 0.721790 1_1:+3929592 Msa0002060:five_prime_UTR
CTGCAATGGATTGTTGATGG+CGG 0.723159 1_1:-3929826 None:intergenic
GTACTTACGAAAACGTTATG+CGG 0.742006 1_1:+3934134 Msa0002060:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAATGTAAAGTAGA+AGG + chr1_1:3930636-3930655 Msa0002060:intron 15.0%
!! AAAAAAATAAATGAAGAGAA+TGG - chr1_1:3930731-3930750 None:intergenic 15.0%
!! ACCTATACATTTATATAAAA+GGG - chr1_1:3930810-3930829 None:intergenic 15.0%
!! AACCTATACATTTATATAAA+AGG - chr1_1:3930811-3930830 None:intergenic 15.0%
!! TAAAATTCAAGTATTTGAAT+TGG + chr1_1:3931105-3931124 Msa0002060:intron 15.0%
!!! AATGTGATTTTTATTGTATT+AGG + chr1_1:3931863-3931882 Msa0002060:intron 15.0%
!!! ATGTAATACTTTTAAAACTT+GGG - chr1_1:3932765-3932784 None:intergenic 15.0%
!!! AATGTAATACTTTTAAAACT+TGG - chr1_1:3932766-3932785 None:intergenic 15.0%
!!! TATTTTTGCAAATTTCTTAA+TGG - chr1_1:3933275-3933294 None:intergenic 15.0%
!! AATAAAGGAAAATTCTTAAT+TGG - chr1_1:3933779-3933798 None:intergenic 15.0%
!! AATTGATTATACTTGAAACT+AGG - chr1_1:3930197-3930216 None:intergenic 20.0%
!!! AAAATTGATTTCAACATGTT+TGG - chr1_1:3930252-3930271 None:intergenic 20.0%
!!! TTTTTGGAAAATTTGATACA+CGG - chr1_1:3930523-3930542 None:intergenic 20.0%
!!! CAAATTTTCCAAAAAATAGA+TGG + chr1_1:3930528-3930547 Msa0002060:intron 20.0%
!!! TCCCTTTTATATAAATGTAT+AGG + chr1_1:3930806-3930825 Msa0002060:intron 20.0%
!! TATTATAATCTATGCACAAA+GGG - chr1_1:3931575-3931594 None:intergenic 20.0%
!! TATGATGCTTATTACTTTAT+TGG + chr1_1:3931773-3931792 Msa0002060:intron 20.0%
!! TAACTATTACTATAGATTGA+AGG - chr1_1:3932259-3932278 None:intergenic 20.0%
!!! TGTAATACTTTTAAAACTTG+GGG - chr1_1:3932764-3932783 None:intergenic 20.0%
!!! TTCCTTTATTTTTTCATGTT+TGG + chr1_1:3933789-3933808 Msa0002060:intron 20.0%
!! AACCAAACATGAAAAAATAA+AGG - chr1_1:3933794-3933813 None:intergenic 20.0%
!! TTCCAATTTCTTTCAAATTT+GGG + chr1_1:3934302-3934321 Msa0002060:three_prime_UTR 20.0%
! CTATAACAAACAATAAACAG+AGG + chr1_1:3929592-3929611 Msa0002060:five_prime_UTR 25.0%
!! GTTTCAAGTATAATCAATTC+TGG + chr1_1:3930198-3930217 Msa0002060:intron 25.0%
! TGAACATAAGTTTATAAGTG+GGG - chr1_1:3930573-3930592 None:intergenic 25.0%
! CTGAACATAAGTTTATAAGT+GGG - chr1_1:3930574-3930593 None:intergenic 25.0%
! AAACAGACTAATAATCATGA+TGG - chr1_1:3931193-3931212 None:intergenic 25.0%
!! TAAATCTCAATTTAGCTTCA+GGG - chr1_1:3931477-3931496 None:intergenic 25.0%
!! GATTTAGATTTCAGTTGTTT+TGG + chr1_1:3931491-3931510 Msa0002060:intron 25.0%
! ATTATAATCTATGCACAAAG+GGG - chr1_1:3931574-3931593 None:intergenic 25.0%
! CTATTATAATCTATGCACAA+AGG - chr1_1:3931576-3931595 None:intergenic 25.0%
! ATAATAGCAACAAAAGTTTG+CGG + chr1_1:3931589-3931608 Msa0002060:CDS 25.0%
!!! TTGATTTGTTGCAAATTCAT+TGG + chr1_1:3931725-3931744 Msa0002060:CDS 25.0%
!! TTTAAAACTTAAGTCAAGCA+TGG + chr1_1:3931830-3931849 Msa0002060:intron 25.0%
!! TGATTTTCTGCTTTCATTAT+AGG + chr1_1:3931962-3931981 Msa0002060:intron 25.0%
! TTTCAAGAACTTATCAATGA+AGG + chr1_1:3932075-3932094 Msa0002060:CDS 25.0%
! TAGAAAAGATAAAGCATGTT+AGG - chr1_1:3932115-3932134 None:intergenic 25.0%
! AACACGAATCATATACTATA+AGG - chr1_1:3932703-3932722 None:intergenic 25.0%
!!! TTTTTTATTTTGGACTCTCT+AGG - chr1_1:3932795-3932814 None:intergenic 25.0%
! TAGAGAGTCCAAAATAAAAA+AGG + chr1_1:3932794-3932813 Msa0002060:intron 25.0%
! ACAAATGATTACAGATAACA+TGG + chr1_1:3932893-3932912 Msa0002060:intron 25.0%
! AACCATACACTAAAAGTTTA+CGG - chr1_1:3933139-3933158 None:intergenic 25.0%
!!! TAATTCGGTTTTGAAAAAGA+CGG - chr1_1:3933599-3933618 None:intergenic 25.0%
! TTATAATAACCAAACTGAAC+TGG - chr1_1:3933714-3933733 None:intergenic 25.0%
!!! TTTTTTCATGTTTGGTTTTC+AGG + chr1_1:3933797-3933816 Msa0002060:intron 25.0%
! AACTATTAAGTATCTTGAGT+TGG + chr1_1:3933824-3933843 Msa0002060:CDS 25.0%
!! TTCAAAGGTATAGTCTTTAA+AGG - chr1_1:3934055-3934074 None:intergenic 25.0%
!! GACTATACCTTTGAATTTTT+CGG + chr1_1:3934060-3934079 Msa0002060:three_prime_UTR 25.0%
!! ACTATACCTTTGAATTTTTC+GGG + chr1_1:3934061-3934080 Msa0002060:three_prime_UTR 25.0%
! ATATTCTTATATCAGTTCCA+TGG + chr1_1:3934084-3934103 Msa0002060:three_prime_UTR 25.0%
! ATTCAATATGTATCTATCCA+TGG - chr1_1:3934104-3934123 None:intergenic 25.0%
! ATTGACAAATAACTCAACAT+GGG - chr1_1:3934184-3934203 None:intergenic 25.0%
! GTTCCAATTTCTTTCAAATT+TGG + chr1_1:3934301-3934320 Msa0002060:three_prime_UTR 25.0%
! TTCCCAAATTTGAAAGAAAT+TGG - chr1_1:3934307-3934326 None:intergenic 25.0%
!! CTAACTTGTTATGACAAAAG+AGG + chr1_1:3929526-3929545 Msa0002060:five_prime_UTR 30.0%
AATATCAGTGAAATCACTCT+TGG + chr1_1:3929876-3929895 Msa0002060:CDS 30.0%
TTAGACAAGTTAGACTCAAT+AGG - chr1_1:3929997-3930016 None:intergenic 30.0%
!! TTAGTGCATGTTTTGTTCTA+TGG + chr1_1:3930018-3930037 Msa0002060:intron 30.0%
CTTTACTTTCAACTCACTTT+CGG - chr1_1:3930088-3930107 None:intergenic 30.0%
! TACACCTCCAGAATTAATTT+TGG + chr1_1:3930271-3930290 Msa0002060:intron 30.0%
! ACACCTCCAGAATTAATTTT+GGG + chr1_1:3930272-3930291 Msa0002060:intron 30.0%
!!! CATGCTGGTTTTTTGTTTTA+AGG - chr1_1:3930333-3930352 None:intergenic 30.0%
! AGTTTTACTCTGACTTCAAT+TGG + chr1_1:3930447-3930466 Msa0002060:intron 30.0%
! GTTTTACTCTGACTTCAATT+GGG + chr1_1:3930448-3930467 Msa0002060:intron 30.0%
!!! CTTACAAGCCATCTATTTTT+TGG - chr1_1:3930539-3930558 None:intergenic 30.0%
! CAAAAAATAGATGGCTTGTA+AGG + chr1_1:3930537-3930556 Msa0002060:intron 30.0%
CCTGAACATAAGTTTATAAG+TGG - chr1_1:3930575-3930594 None:intergenic 30.0%
CCACTTATAAACTTATGTTC+AGG + chr1_1:3930572-3930591 Msa0002060:intron 30.0%
AATCAAGATTGTTAAAGTCC+CGG - chr1_1:3930613-3930632 None:intergenic 30.0%
! TGACAAGGTATTAGTTATTC+AGG + chr1_1:3931417-3931436 Msa0002060:intron 30.0%
GTATTAGTTATTCAGGAGTT+TGG + chr1_1:3931424-3931443 Msa0002060:intron 30.0%
! CTAAATCTCAATTTAGCTTC+AGG - chr1_1:3931478-3931497 None:intergenic 30.0%
TTATAATCTATGCACAAAGG+GGG - chr1_1:3931573-3931592 None:intergenic 30.0%
GACAAATATCAAAGAAAGTG+TGG + chr1_1:3931669-3931688 Msa0002060:CDS 30.0%
! ATTTGTTGCAAATTCATTGG+TGG + chr1_1:3931728-3931747 Msa0002060:intron 30.0%
TTTGTTGCAAATTCATTGGT+GGG + chr1_1:3931729-3931748 Msa0002060:intron 30.0%
GATGCTTATTACTTTATTGG+TGG + chr1_1:3931776-3931795 Msa0002060:intron 30.0%
!! GTTCAAAAACAATTTTAGCC+TGG - chr1_1:3931918-3931937 None:intergenic 30.0%
ATTCCTATGATCCTTCAAAA+TGG + chr1_1:3932016-3932035 Msa0002060:CDS 30.0%
AGAACTTATCAATGAAGGAA+AGG + chr1_1:3932080-3932099 Msa0002060:CDS 30.0%
AGATAAAGCATGTTAGGAAT+AGG - chr1_1:3932109-3932128 None:intergenic 30.0%
TCAAAGACTTATGAATCACA+AGG - chr1_1:3932351-3932370 None:intergenic 30.0%
AGTTTATGCTAATTGATGTG+TGG - chr1_1:3932394-3932413 None:intergenic 30.0%
!! TTTGTATTTTTGCATGCATC+AGG + chr1_1:3932451-3932470 Msa0002060:intron 30.0%
GTTTCAAATGAGACTTCATA+TGG + chr1_1:3932488-3932507 Msa0002060:CDS 30.0%
ATCACTTAATTCTGTATTGC+TGG + chr1_1:3932653-3932672 Msa0002060:intron 30.0%
TCATATACTATAAGGACAAC+AGG - chr1_1:3932695-3932714 None:intergenic 30.0%
!!! CAGGAAAGCCTTTTTTATTT+TGG - chr1_1:3932805-3932824 None:intergenic 30.0%
GATTACAGATAACATGGTTT+AGG + chr1_1:3932899-3932918 Msa0002060:intron 30.0%
TCTCACAATCAGCAATTTAT+AGG + chr1_1:3932998-3933017 Msa0002060:intron 30.0%
TCCAATTTATCCTTCAAACA+TGG + chr1_1:3933060-3933079 Msa0002060:intron 30.0%
CCAATTTATCCTTCAAACAT+GGG + chr1_1:3933061-3933080 Msa0002060:intron 30.0%
GATCATATTCATATGCACTT+TGG + chr1_1:3933083-3933102 Msa0002060:intron 30.0%
!!! TTGGACGTTTTTGAAGTTTA+AGG - chr1_1:3933110-3933129 None:intergenic 30.0%
TAAAAGTTTACGGATCACAT+TGG - chr1_1:3933129-3933148 None:intergenic 30.0%
! ATCCGTAAACTTTTAGTGTA+TGG + chr1_1:3933134-3933153 Msa0002060:intron 30.0%
!! AATTCTAAAGCTGCAAAAAG+TGG + chr1_1:3933480-3933499 Msa0002060:intron 30.0%
GATATAACCAATCACTTTCA+CGG + chr1_1:3933535-3933554 Msa0002060:intron 30.0%
ATATAACCAATCACTTTCAC+GGG + chr1_1:3933536-3933555 Msa0002060:intron 30.0%
TTCAATGACTTTAAACCACT+CGG + chr1_1:3933650-3933669 Msa0002060:intron 30.0%
TTATTTGAGCAGTTCAATTG+CGG - chr1_1:3933682-3933701 None:intergenic 30.0%
CAGTTTGGTTATTATAACAC+TGG + chr1_1:3933717-3933736 Msa0002060:intron 30.0%
ATTGGTTATCTTGTTAACCA+TGG - chr1_1:3933761-3933780 None:intergenic 30.0%
! CATCAATGTCTTCTTTTAGT+TGG - chr1_1:3933947-3933966 None:intergenic 30.0%
! ATGCTTTTACAACAACTGAA+CGG + chr1_1:3933964-3933983 Msa0002060:CDS 30.0%
! TATAGTCTTTAAAGGATGCT+AGG - chr1_1:3934047-3934066 None:intergenic 30.0%
GAATATCCCGAAAAATTCAA+AGG - chr1_1:3934070-3934089 None:intergenic 30.0%
TATTCAATACCCAGTTTGTA+CGG - chr1_1:3934160-3934179 None:intergenic 30.0%
CATTGACAAATAACTCAACA+TGG - chr1_1:3934185-3934204 None:intergenic 30.0%
AACAACGTGTTTGTATTGTG+TGG + chr1_1:3929625-3929644 Msa0002060:five_prime_UTR 35.0%
TTGTGTGAGAGAATGAGAAA+TGG - chr1_1:3929715-3929734 None:intergenic 35.0%
! GTAGAAGAAGATGCATTTTG+AGG + chr1_1:3929772-3929791 Msa0002060:CDS 35.0%
!! TGTTTTGTTCCACTTCTAGA+GGG - chr1_1:3930298-3930317 None:intergenic 35.0%
!! TTGTTTTGTTCCACTTCTAG+AGG - chr1_1:3930299-3930318 None:intergenic 35.0%
GTGCTAACAATTCCTTTGTT+GGG + chr1_1:3930411-3930430 Msa0002060:intron 35.0%
! GTAGCATGTTGTTGATTGAT+TGG + chr1_1:3930898-3930917 Msa0002060:intron 35.0%
CAATGTTTCAGATGACCTTT+GGG + chr1_1:3930923-3930942 Msa0002060:intron 35.0%
AATGTTTCAGATGACCTTTG+GGG + chr1_1:3930924-3930943 Msa0002060:intron 35.0%
CTCAATTATGCATTCGAGAA+CGG + chr1_1:3930979-3930998 Msa0002060:CDS 35.0%
GTGAAAATGAGATGGAATGA+AGG - chr1_1:3931062-3931081 None:intergenic 35.0%
GTACAAGTGTGAAAATGAGA+TGG - chr1_1:3931070-3931089 None:intergenic 35.0%
TCTCTTTCTTCATTGGAATC+GGG - chr1_1:3931345-3931364 None:intergenic 35.0%
GTCTCTTTCTTCATTGGAAT+CGG - chr1_1:3931346-3931365 None:intergenic 35.0%
! AGAAATAGTGATGATGAACC+AGG + chr1_1:3931897-3931916 Msa0002060:intron 35.0%
! AGCAAATACAAAGTACTCCT+CGG - chr1_1:3932187-3932206 None:intergenic 35.0%
TCACATACACATGTACAAGA+AGG - chr1_1:3932422-3932441 None:intergenic 35.0%
TTCTGGATACTGACAATCTT+TGG - chr1_1:3932554-3932573 None:intergenic 35.0%
!! CTTGTAAGAAGTCGTTTTGA+AGG + chr1_1:3932587-3932606 Msa0002060:CDS 35.0%
CCAAGTATTCAAAGATCTAC+AGG - chr1_1:3932824-3932843 None:intergenic 35.0%
CCTGTAGATCTTTGAATACT+TGG + chr1_1:3932821-3932840 Msa0002060:intron 35.0%
!!! TTTAGGATTTTAGTTGCCAG+AGG + chr1_1:3932916-3932935 Msa0002060:intron 35.0%
CCCATGTTTGAAGGATAAAT+TGG - chr1_1:3933064-3933083 None:intergenic 35.0%
GAATATGATCCCATGTTTGA+AGG - chr1_1:3933073-3933092 None:intergenic 35.0%
AGCTTCTTCATGTTCTTAGT+TGG + chr1_1:3933340-3933359 Msa0002060:intron 35.0%
CAATGTTGCAATTCTTTGGA+TGG - chr1_1:3933401-3933420 None:intergenic 35.0%
CATCCAAAGAATTGCAACAT+TGG + chr1_1:3933399-3933418 Msa0002060:intron 35.0%
AAGCCAATGTTGCAATTCTT+TGG - chr1_1:3933405-3933424 None:intergenic 35.0%
TATATCTTTCCATGTAGCCA+GGG - chr1_1:3933521-3933540 None:intergenic 35.0%
TTATATCTTTCCATGTAGCC+AGG - chr1_1:3933522-3933541 None:intergenic 35.0%
AATAACCAAACTGAACTGGA+TGG - chr1_1:3933710-3933729 None:intergenic 35.0%
! GTTAACCATGGTTTAGAGTA+TGG - chr1_1:3933749-3933768 None:intergenic 35.0%
AGGAGTTAAACCATGTTTCT+TGG - chr1_1:3933850-3933869 None:intergenic 35.0%
ATAATTGAACTCGCCATGAA+TGG - chr1_1:3933906-3933925 None:intergenic 35.0%
TTCATGGCGAGTTCAATTAT+CGG + chr1_1:3933906-3933925 Msa0002060:CDS 35.0%
GTACTTACGAAAACGTTATG+CGG + chr1_1:3934134-3934153 Msa0002060:three_prime_UTR 35.0%
ATGAGAAATGGCAACAACGT+CGG - chr1_1:3929703-3929722 None:intergenic 40.0%
!! GAAGAAGATGCATTTTGAGG+AGG + chr1_1:3929775-3929794 Msa0002060:CDS 40.0%
!! GTACTGCAATGGATTGTTGA+TGG - chr1_1:3929832-3929851 None:intergenic 40.0%
TCAACAATCCATTGCAGTAC+CGG + chr1_1:3929832-3929851 Msa0002060:CDS 40.0%
AGAGGGCCCAAAATTAATTC+TGG - chr1_1:3930281-3930300 None:intergenic 40.0%
AAAAAACCAGCATGTAACCC+AGG + chr1_1:3930339-3930358 Msa0002060:intron 40.0%
AAAAACCAGCATGTAACCCA+GGG + chr1_1:3930340-3930359 Msa0002060:intron 40.0%
TTCGAACTTGACACCTAAAG+AGG - chr1_1:3930383-3930402 None:intergenic 40.0%
AAAGGAATTGTTAGCACCTG+GGG - chr1_1:3930408-3930427 None:intergenic 40.0%
CAAAGGAATTGTTAGCACCT+GGG - chr1_1:3930409-3930428 None:intergenic 40.0%
ACAAAGGAATTGTTAGCACC+TGG - chr1_1:3930410-3930429 None:intergenic 40.0%
GGTGCTAACAATTCCTTTGT+TGG + chr1_1:3930410-3930429 Msa0002060:intron 40.0%
TATATGAACTCGCCCAACAA+AGG - chr1_1:3930426-3930445 None:intergenic 40.0%
! AATAGATGGCTTGTAAGGTG+AGG + chr1_1:3930542-3930561 Msa0002060:intron 40.0%
GCAATGTTTCAGATGACCTT+TGG + chr1_1:3930922-3930941 Msa0002060:intron 40.0%
TAATGCTCTTGATACTGCTG+AGG + chr1_1:3931005-3931024 Msa0002060:CDS 40.0%
AGTTGTGTGTAGGGATAACT+TGG - chr1_1:3931242-3931261 None:intergenic 40.0%
GATTGCAAGAGTTGTGTGTA+GGG - chr1_1:3931251-3931270 None:intergenic 40.0%
AGATTGCAAGAGTTGTGTGT+AGG - chr1_1:3931252-3931271 None:intergenic 40.0%
CCTTGTGTCTCTTTCTTCAT+TGG - chr1_1:3931352-3931371 None:intergenic 40.0%
CCAATGAAGAAAGAGACACA+AGG + chr1_1:3931349-3931368 Msa0002060:CDS 40.0%
CTGATCTCTATATAGCTAGC+TGG + chr1_1:3931377-3931396 Msa0002060:CDS 40.0%
GAAATCTCAATCTCGTGACA+AGG + chr1_1:3931402-3931421 Msa0002060:CDS 40.0%
CTGAGAGATCGAGTTACTTA+CGG + chr1_1:3931617-3931636 Msa0002060:CDS 40.0%
TGAGAGATCGAGTTACTTAC+GGG + chr1_1:3931618-3931637 Msa0002060:CDS 40.0%
GAGAAAAGTCTTAAGCGTCT+CGG + chr1_1:3931691-3931710 Msa0002060:CDS 40.0%
AGAAAAGTCTTAAGCGTCTC+GGG + chr1_1:3931692-3931711 Msa0002060:CDS 40.0%
!! CCTCCATTTTGAAGGATCAT+AGG - chr1_1:3932022-3932041 None:intergenic 40.0%
CCTATGATCCTTCAAAATGG+AGG + chr1_1:3932019-3932038 Msa0002060:CDS 40.0%
GCTTGCAACTGTTCAACAAA+CGG - chr1_1:3932054-3932073 None:intergenic 40.0%
ATGCATCAGGTACGTTACAT+AGG + chr1_1:3932464-3932483 Msa0002060:intron 40.0%
TGAGACTTCATATGGAGTGA+TGG + chr1_1:3932496-3932515 Msa0002060:CDS 40.0%
! AGTACAGTTCTTTTCTGACG+TGG + chr1_1:3932612-3932631 Msa0002060:intron 40.0%
TTGAAGGTGGCAAGAGAAAT+AGG + chr1_1:3932946-3932965 Msa0002060:intron 40.0%
!! GCATACATTCTCCTGCTTTT+GGG + chr1_1:3933020-3933039 Msa0002060:intron 40.0%
!! CATACATTCTCCTGCTTTTG+GGG + chr1_1:3933021-3933040 Msa0002060:intron 40.0%
GCTAAAAATTCCCCAAAAGC+AGG - chr1_1:3933034-3933053 None:intergenic 40.0%
ATTTACCCCACTCCAAGTTA+GGG - chr1_1:3933242-3933261 None:intergenic 40.0%
AATTTACCCCACTCCAAGTT+AGG - chr1_1:3933243-3933262 None:intergenic 40.0%
ACTTCACATCCGCTAACTTA+GGG - chr1_1:3933316-3933335 None:intergenic 40.0%
AACTTCACATCCGCTAACTT+AGG - chr1_1:3933317-3933336 None:intergenic 40.0%
!! TGTTTTTGCAGTTGATCTCG+TGG + chr1_1:3933368-3933387 Msa0002060:intron 40.0%
TTCTTACCCGTGAAAGTGAT+TGG - chr1_1:3933545-3933564 None:intergenic 40.0%
TGCTGGTACGATGTCTAATT+CGG - chr1_1:3933614-3933633 None:intergenic 40.0%
TCAGACCATACTCTAAACCA+TGG + chr1_1:3933741-3933760 Msa0002060:intron 40.0%
AATTATCGGTGCAACATCTG+TGG + chr1_1:3933920-3933939 Msa0002060:CDS 40.0%
AAAAACGATGTGCACGAGTG+TGG + chr1_1:3929550-3929569 Msa0002060:five_prime_UTR 45.0%
GATAAGCTGCTAAGAAGCCA+TGG + chr1_1:3929656-3929675 Msa0002060:exon 45.0%
!! CTGCAATGGATTGTTGATGG+CGG - chr1_1:3929829-3929848 None:intergenic 45.0%
GATCAGAGTCACCAAGTTTC+CGG - chr1_1:3929854-3929873 None:intergenic 45.0%
GGGCCCAAAATTAATTCTGG+AGG - chr1_1:3930278-3930297 None:intergenic 45.0%
!! AATTTTGGGCCCTCTAGAAG+TGG + chr1_1:3930286-3930305 Msa0002060:intron 45.0%
! ACCTAAAGAGGCATACTCCT+AGG - chr1_1:3930371-3930390 None:intergenic 45.0%
AAGGAATTGTTAGCACCTGG+GGG - chr1_1:3930407-3930426 None:intergenic 45.0%
AATCCTATCATCCACTAGCG+AGG - chr1_1:3930474-3930493 None:intergenic 45.0%
! TCGCTAGTGGATGATAGGAT+TGG + chr1_1:3930473-3930492 Msa0002060:intron 45.0%
! TCCTCTGACTAGTCGGTTAT+TGG + chr1_1:3930496-3930515 Msa0002060:intron 45.0%
! TCCAATAACCGACTAGTCAG+AGG - chr1_1:3930500-3930519 None:intergenic 45.0%
CAGGTCAGTCTCATTCAATC+CGG + chr1_1:3930591-3930610 Msa0002060:intron 45.0%
AGGTCAGTCTCATTCAATCC+GGG + chr1_1:3930592-3930611 Msa0002060:intron 45.0%
! TTCTGTGTTTTGCTCCCCAA+AGG - chr1_1:3930941-3930960 None:intergenic 45.0%
! GGGACAATGCAGACATTTTG+CGG + chr1_1:3931638-3931657 Msa0002060:CDS 45.0%
! GGACAATGCAGACATTTTGC+GGG + chr1_1:3931639-3931658 Msa0002060:CDS 45.0%
AACAATGCAACGTAGCGATC+TGG - chr1_1:3931988-3932007 None:intergenic 45.0%
GATCGCTACGTTGCATTGTT+TGG + chr1_1:3931988-3932007 Msa0002060:CDS 45.0%
! ACACTAGGCCTCCATTTTGA+AGG - chr1_1:3932030-3932049 None:intergenic 45.0%
TGTTCAACAAACGGCACACT+AGG - chr1_1:3932045-3932064 None:intergenic 45.0%
!!! GTTTTGACTTAGAGAAGCCG+AGG + chr1_1:3932167-3932186 Msa0002060:intron 45.0%
GTCCATGCAGCTAAAGTTGA+GGG + chr1_1:3932524-3932543 Msa0002060:CDS 45.0%
CAAGCAAGCTATAGCTGTTC+TGG - chr1_1:3932571-3932590 None:intergenic 45.0%
!! TTTTAGTTGCCAGAGGTGCA+AGG + chr1_1:3932923-3932942 Msa0002060:intron 45.0%
! GGCATACATTCTCCTGCTTT+TGG + chr1_1:3933019-3933038 Msa0002060:intron 45.0%
AGTCCAGTTGAACCCTAACT+TGG + chr1_1:3933227-3933246 Msa0002060:intron 45.0%
ACTCCAAGTTAGGGTTCAAC+TGG - chr1_1:3933233-3933252 None:intergenic 45.0%
AGTTGAACCCTAACTTGGAG+TGG + chr1_1:3933232-3933251 Msa0002060:intron 45.0%
GTTGAACCCTAACTTGGAGT+GGG + chr1_1:3933233-3933252 Msa0002060:intron 45.0%
TTGAACCCTAACTTGGAGTG+GGG + chr1_1:3933234-3933253 Msa0002060:intron 45.0%
TTGCTATCCTATTCCCCACT+AGG + chr1_1:3933423-3933442 Msa0002060:intron 45.0%
ATCGTACCAGCATGACTTCT+GGG + chr1_1:3933622-3933641 Msa0002060:intron 45.0%
CTGAACCATCCAGTTCAGTT+TGG + chr1_1:3933702-3933721 Msa0002060:intron 45.0%
!! CTTGAGTTGGCCAAGAAACA+TGG + chr1_1:3933837-3933856 Msa0002060:CDS 45.0%
TGTGAGAGATCGTCCATTCA+TGG + chr1_1:3933890-3933909 Msa0002060:CDS 45.0%
GTCATGACTTCTGCTGGTAA+AGG - chr1_1:3933990-3934009 None:intergenic 45.0%
TTACCAGCAGAAGTCATGAC+AGG + chr1_1:3933990-3934009 Msa0002060:CDS 45.0%
ATTCCTGTCATGACTTCTGC+TGG - chr1_1:3933996-3934015 None:intergenic 45.0%
!!! TTTATTTGAAATTATTATTA+AGG + chr1_1:3930748-3930767 Msa0002060:intron 5.0%
!!! TTATTTGAAATTATTATTAA+GGG + chr1_1:3930749-3930768 Msa0002060:intron 5.0%
AGAAATGGCAACAACGTCGG+AGG - chr1_1:3929700-3929719 None:intergenic 50.0%
!! TTGATGGCGGCACAAACAAG+AGG - chr1_1:3929816-3929835 None:intergenic 50.0%
CCAAGTTTCCGGTACTGCAA+TGG - chr1_1:3929843-3929862 None:intergenic 50.0%
! CCATTGCAGTACCGGAAACT+TGG + chr1_1:3929840-3929859 Msa0002060:CDS 50.0%
ATACTCCTAGGCCAATCCCT+GGG - chr1_1:3930359-3930378 None:intergenic 50.0%
! GCCTAGGAGTATGCCTCTTT+AGG + chr1_1:3930367-3930386 Msa0002060:intron 50.0%
!! GGATTGGTCCTCTGACTAGT+CGG + chr1_1:3930489-3930508 Msa0002060:intron 50.0%
CGTCCATGCAGCTAAAGTTG+AGG + chr1_1:3932523-3932542 Msa0002060:CDS 50.0%
GTCCCTCAACTTTAGCTGCA+TGG - chr1_1:3932529-3932548 None:intergenic 50.0%
GCACCATGACCCTAAGTTAG+CGG + chr1_1:3933304-3933323 Msa0002060:intron 50.0%
CATCCGCTAACTTAGGGTCA+TGG - chr1_1:3933310-3933329 None:intergenic 50.0%
CTATCCTATTCCCCACTAGG+CGG + chr1_1:3933426-3933445 Msa0002060:intron 50.0%
GGAAGACTGAATCTCTTCCC+TGG + chr1_1:3933501-3933520 Msa0002060:intron 50.0%
GAATCTCTTCCCTGGCTACA+TGG + chr1_1:3933509-3933528 Msa0002060:intron 50.0%
CATCGTACCAGCATGACTTC+TGG + chr1_1:3933621-3933640 Msa0002060:intron 50.0%
!! CAATTGCGGTTTTGTCCGAG+TGG - chr1_1:3933668-3933687 None:intergenic 50.0%
GTTATGCGGCCGTACAAACT+GGG + chr1_1:3934148-3934167 Msa0002060:three_prime_UTR 50.0%
GATGTGCACGAGTGTGGTGT+TGG + chr1_1:3929556-3929575 Msa0002060:five_prime_UTR 55.0%
AGCTGCTAAGAAGCCATGGC+CGG + chr1_1:3929660-3929679 Msa0002060:exon 55.0%
GGAGGAGAAAGAGCAGACAC+CGG - chr1_1:3929682-3929701 None:intergenic 55.0%
TGAGGAGGACGAGAACTGTG+AGG + chr1_1:3929790-3929809 Msa0002060:CDS 55.0%
CCAATCCCTGGGTTACATGC+TGG - chr1_1:3930348-3930367 None:intergenic 55.0%
CCAGCATGTAACCCAGGGAT+TGG + chr1_1:3930345-3930364 Msa0002060:intron 55.0%
!! TGTAACCCAGGGATTGGCCT+AGG + chr1_1:3930351-3930370 Msa0002060:intron 55.0%
CATACTCCTAGGCCAATCCC+TGG - chr1_1:3930360-3930379 None:intergenic 55.0%
GTGTCAAGTTCGAATCCCCC+AGG + chr1_1:3930389-3930408 Msa0002060:intron 55.0%
CTTCAATTGGGCCTCGCTAG+TGG + chr1_1:3930460-3930479 Msa0002060:intron 55.0%
! TGCCAGAGGTGCAAGGTTGA+AGG + chr1_1:3932930-3932949 Msa0002060:intron 55.0%
CACCTTCAACCTTGCACCTC+TGG - chr1_1:3932935-3932954 None:intergenic 55.0%
! CAGAGGTGCAAGGTTGAAGG+TGG + chr1_1:3932933-3932952 Msa0002060:intron 55.0%
ACCAGCATGACTTCTGGGTC+AGG + chr1_1:3933627-3933646 Msa0002060:intron 55.0%
ACCTGACCCAGAAGTCATGC+TGG - chr1_1:3933631-3933650 None:intergenic 55.0%
AATCCAAGCGCGAGCTGAAC+AGG - chr1_1:3933870-3933889 None:intergenic 55.0%
CGTTATGCGGCCGTACAAAC+TGG + chr1_1:3934147-3934166 Msa0002060:three_prime_UTR 55.0%
GAAAGAGCAGACACCGGCCA+TGG - chr1_1:3929676-3929695 None:intergenic 60.0%
! GGGCCTCGCTAGTGGATGAT+AGG + chr1_1:3930468-3930487 Msa0002060:intron 60.0%
TCCTATTCCCCACTAGGCGG+CGG + chr1_1:3933429-3933448 Msa0002060:intron 60.0%
! AGAGTGTTCCGCCGCCTAGT+GGG - chr1_1:3933440-3933459 None:intergenic 60.0%
ACTCCTGTTCAGCTCGCGCT+TGG + chr1_1:3933864-3933883 Msa0002060:CDS 60.0%
TCCGCCGCCTAGTGGGGAAT+AGG - chr1_1:3933433-3933452 None:intergenic 65.0%
GAGTGTTCCGCCGCCTAGTG+GGG - chr1_1:3933439-3933458 None:intergenic 65.0%
!! GAGAGTGTTCCGCCGCCTAG+TGG - chr1_1:3933441-3933460 None:intergenic 65.0%
CTAGGCGGCGGAACACTCTC+TGG + chr1_1:3933441-3933460 Msa0002060:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 3929521 3934339 3929521 ID=Msa0002060;Name=Msa0002060
chr1_1 mRNA 3929521 3934339 3929521 ID=Msa0002060-mRNA-1;Parent=Msa0002060;Name=Msa0002060-mRNA-1;_AED=0.17;_eAED=0.17;_QI=154|0.44|0.7|0.8|1|1|10|281|361
chr1_1 exon 3929521 3929902 3929521 ID=Msa0002060-mRNA-1:exon:1162;Parent=Msa0002060-mRNA-1
chr1_1 exon 3930770 3930775 3930770 ID=Msa0002060-mRNA-1:exon:1163;Parent=Msa0002060-mRNA-1
chr1_1 exon 3930934 3931029 3930934 ID=Msa0002060-mRNA-1:exon:1164;Parent=Msa0002060-mRNA-1
chr1_1 exon 3931340 3931423 3931340 ID=Msa0002060-mRNA-1:exon:1165;Parent=Msa0002060-mRNA-1
chr1_1 exon 3931586 3931746 3931586 ID=Msa0002060-mRNA-1:exon:1166;Parent=Msa0002060-mRNA-1
chr1_1 exon 3931885 3931893 3931885 ID=Msa0002060-mRNA-1:exon:1167;Parent=Msa0002060-mRNA-1
chr1_1 exon 3931984 3932101 3931984 ID=Msa0002060-mRNA-1:exon:1168;Parent=Msa0002060-mRNA-1
chr1_1 exon 3932473 3932608 3932473 ID=Msa0002060-mRNA-1:exon:1169;Parent=Msa0002060-mRNA-1
chr1_1 exon 3933379 3933386 3933379 ID=Msa0002060-mRNA-1:exon:1170;Parent=Msa0002060-mRNA-1
chr1_1 exon 3933819 3934339 3933819 ID=Msa0002060-mRNA-1:exon:1171;Parent=Msa0002060-mRNA-1
chr1_1 five_prime_UTR 3929521 3929674 3929521 ID=Msa0002060-mRNA-1:five_prime_utr;Parent=Msa0002060-mRNA-1
chr1_1 CDS 3929675 3929902 3929675 ID=Msa0002060-mRNA-1:cds;Parent=Msa0002060-mRNA-1
chr1_1 CDS 3930770 3930775 3930770 ID=Msa0002060-mRNA-1:cds;Parent=Msa0002060-mRNA-1
chr1_1 CDS 3930934 3931029 3930934 ID=Msa0002060-mRNA-1:cds;Parent=Msa0002060-mRNA-1
chr1_1 CDS 3931340 3931423 3931340 ID=Msa0002060-mRNA-1:cds;Parent=Msa0002060-mRNA-1
chr1_1 CDS 3931586 3931746 3931586 ID=Msa0002060-mRNA-1:cds;Parent=Msa0002060-mRNA-1
chr1_1 CDS 3931885 3931893 3931885 ID=Msa0002060-mRNA-1:cds;Parent=Msa0002060-mRNA-1
chr1_1 CDS 3931984 3932101 3931984 ID=Msa0002060-mRNA-1:cds;Parent=Msa0002060-mRNA-1
chr1_1 CDS 3932473 3932608 3932473 ID=Msa0002060-mRNA-1:cds;Parent=Msa0002060-mRNA-1
chr1_1 CDS 3933379 3933386 3933379 ID=Msa0002060-mRNA-1:cds;Parent=Msa0002060-mRNA-1
chr1_1 CDS 3933819 3934058 3933819 ID=Msa0002060-mRNA-1:cds;Parent=Msa0002060-mRNA-1
chr1_1 three_prime_UTR 3934059 3934339 3934059 ID=Msa0002060-mRNA-1:three_prime_utr;Parent=Msa0002060-mRNA-1
Gene Sequence

>Msa0002060

ATGGCCGGTGTCTGCTCTTTCTCCTCCGACGTTGTTGCCATTTCTCATTCTCTCACACAATCACTGTCTCTCAACAATACTACACTTTCAACAACAAGTAGAAGAAGATGCATTTTGAGGAGGACGAGAACTGTGAGGCCTCTTGTTTGTGCCGCCATCAACAATCCATTGCAGTACCGGAAACTTGGTGACTCTGATCTTAATATCAGTGAAATCACTCTTGGTACTGGTAAAATGACCTTTGGGGAGCAAAACACAGAAAAAGAATCTCATGACATACTCAATTATGCATTCGAGAACGGCATTAATGCTCTTGATACTGCTGAGGCTTACCCGATTCCAATGAAGAAAGAGACACAAGGAAAAACTGATCTCTATATAGCTAGCTGGCTGAAATCTCAATCTCGTGACAAGATTATAATAGCAACAAAAGTTTGCGGTTATTCTGAGAGATCGAGTTACTTACGGGACAATGCAGACATTTTGCGGGTTGATGCGACAAATATCAAAGAAAGTGTGGAGAAAAGTCTTAAGCGTCTCGGGACTGATTATATTGATTTGTTGCAAATTCATTGGAATCATAAGCCAGATCGCTACGTTGCATTGTTTGGTGAATATTCCTATGATCCTTCAAAATGGAGGCCTAGTGTGCCGTTTGTTGAACAGTTGCAAGCTTTTCAAGAACTTATCAATGAAGGAAAGGTACGTTACATAGGTGTTTCAAATGAGACTTCATATGGAGTGATGGAATTCGTCCATGCAGCTAAAGTTGAGGGACTTCCAAAGATTGTCAGTATCCAGAACAGCTATAGCTTGCTTGTAAGAAGTCGTTTTGAAGTTGATCTCGAAGCAACTATTAAGTATCTTGAGTTGGCCAAGAAACATGGTTTAACTCCTGTTCAGCTCGCGCTTGGATTTGTGAGAGATCGTCCATTCATGGCGAGTTCAATTATCGGTGCAACATCTGTGGACCAACTAAAAGAAGACATTGATGCTTTTACAACAACTGAACGGCCTTTACCAGCAGAAGTCATGACAGGAATTGAAGCTATCTTCAAGAGATACAAAGATCCTAGCATCCTTTAA

Protein sequence

>Msa0002060

MAGVCSFSSDVVAISHSLTQSLSLNNTTLSTTSRRRCILRRTRTVRPLVCAAINNPLQYRKLGDSDLNISEITLGTGKMTFGEQNTEKESHDILNYAFENGINALDTAEAYPIPMKKETQGKTDLYIASWLKSQSRDKIIIATKVCGYSERSSYLRDNADILRVDATNIKESVEKSLKRLGTDYIDLLQIHWNHKPDRYVALFGEYSYDPSKWRPSVPFVEQLQAFQELINEGKVRYIGVSNETSYGVMEFVHAAKVEGLPKIVSIQNSYSLLVRSRFEVDLEATIKYLELAKKHGLTPVQLALGFVRDRPFMASSIIGATSVDQLKEDIDAFTTTERPLPAEVMTGIEAIFKRYKDPSIL*