AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1034400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1034400 MtrunA17_Chr7g0257301 91.345 1063 53 6 1 1028 1 1059 0.0 1961
Msa1034400 MtrunA17_Chr3g0102921 45.387 802 367 19 12 774 41 810 0.0 618
Msa1034400 MtrunA17_Chr1g0195111 57.642 458 162 5 321 774 326 755 3.88e-170 525
Msa1034400 MtrunA17_Chr1g0195111 49.306 144 64 3 14 154 25 162 5.58e-34 141
Msa1034400 MtrunA17_Chr1g0192481 57.243 428 156 4 346 771 13 415 5.54e-167 502
Msa1034400 MtrunA17_Chr5g0447041 53.535 495 197 6 314 775 342 836 9.24e-167 521
Msa1034400 MtrunA17_Chr5g0447041 49.306 144 65 3 12 153 37 174 7.11e-32 135
Msa1034400 MtrunA17_Chr7g0271961 54.371 469 175 5 311 774 321 755 4.95e-163 506
Msa1034400 MtrunA17_Chr7g0271961 48.428 159 72 4 14 168 28 180 6.90e-35 144
Msa1034400 MtrunA17_Chr7g0269691 39.254 563 291 14 12 551 27 561 4.31e-115 366
Msa1034400 MtrunA17_Chr5g0411971 44.175 412 189 6 371 776 379 755 4.26e-95 325
Msa1034400 MtrunA17_Chr5g0421591 43.932 412 190 6 371 776 354 730 1.44e-94 320
Msa1034400 MtrunA17_Chr1g0191851 41.357 457 226 8 319 767 74 496 5.50e-94 316
Msa1034400 MtrunA17_Chr5g0421521 43.447 412 192 6 371 776 354 730 2.60e-93 318
Msa1034400 MtrunA17_Chr2g0312631 44.527 402 185 8 379 774 372 741 3.58e-91 314
Msa1034400 MtrunA17_Chr7g0269681 69.626 214 64 1 562 774 12 225 3.54e-90 297
Msa1034400 MtrunA17_Chr7g0272871 40.781 461 223 9 319 767 54 476 4.46e-90 304
Msa1034400 MtrunA17_Chr2g0280421 37.190 484 232 15 288 748 338 772 5.07e-78 272
Msa1034400 MtrunA17_Chr2g0319271 38.478 460 224 13 313 748 322 746 1.46e-77 270
Msa1034400 MtrunA17_Chr4g0042061 35.865 474 231 12 315 748 338 778 3.96e-74 261
Msa1034400 MtrunA17_Chr8g0386901 51.489 235 112 1 318 550 410 644 2.66e-73 256
Msa1034400 MtrunA17_Chr4g0049011 37.617 428 232 13 325 745 222 621 2.16e-72 253
Msa1034400 MtrunA17_Chr8g0386891 57.848 223 86 2 588 802 1 223 4.39e-71 242
Msa1034400 MtrunA17_Chr6g0484511 56.281 199 82 3 357 551 255 452 1.94e-68 238
Msa1034400 MtrunA17_Chr8g0390981 50.439 228 110 2 321 546 445 671 1.80e-66 237
Msa1034400 MtrunA17_Chr8g0390981 37.008 127 62 3 21 147 35 143 2.58e-13 74.3
Msa1034400 MtrunA17_Chr6g0484501 57.870 216 88 3 562 774 3 218 9.44e-65 218
Msa1034400 MtrunA17_Chr8g0369881 35.948 459 220 12 327 767 818 1220 3.67e-64 237
Msa1034400 MtrunA17_Chr5g0407791 34.598 448 241 10 327 767 832 1234 2.68e-63 234
Msa1034400 MtrunA17_Chr1g0191181 35.765 425 229 11 344 764 44 428 2.68e-59 215
Msa1034400 MtrunA17_Chr8g0367581 36.702 376 195 9 374 745 129 465 8.98e-59 221
Msa1034400 MtrunA17_Chr8g0390991 63.243 185 64 2 591 774 4 185 4.90e-58 210
Msa1034400 MtrunA17_Chr4g0069141 35.961 406 202 10 388 771 150 519 4.99e-55 209
Msa1034400 MtrunA17_Chr3g0132921 29.724 471 286 13 391 850 9 445 3.28e-54 198
Msa1034400 MtrunA17_Chr2g0322291 38.571 350 169 8 435 767 130 450 1.30e-53 204
Msa1034400 MtrunA17_Chr4g0045381 35.176 398 202 10 391 767 193 555 9.32e-53 202
Msa1034400 MtrunA17_Chr1g0178411 36.223 323 173 7 433 742 58 360 2.95e-50 193
Msa1034400 MtrunA17_Chr1g0182151 34.677 372 205 10 386 742 49 397 4.04e-50 192
Msa1034400 MtrunA17_Chr7g0266631 36.145 332 161 8 433 742 54 356 1.30e-49 191
Msa1034400 MtrunA17_Chr1g0153061 32.178 404 229 10 392 770 9 392 1.60e-49 191
Msa1034400 MtrunA17_Chr5g0427481 32.564 390 224 9 392 763 18 386 2.03e-49 191
Msa1034400 MtrunA17_Chr4g0053211 31.387 411 235 11 391 773 12 403 5.19e-49 189
Msa1034400 MtrunA17_Chr3g0134191 32.178 404 229 11 392 770 9 392 8.95e-49 188
Msa1034400 MtrunA17_Chr5g0398521 34.635 384 183 13 390 743 56 401 3.43e-48 186
Msa1034400 MtrunA17_Chr2g0327581 35.423 319 176 7 433 742 94 391 5.05e-48 186
Msa1034400 MtrunA17_Chr2g0307481 32.629 426 213 12 374 775 53 428 8.87e-47 178
Msa1034400 MtrunA17_Chr1g0152231 35.674 356 166 11 435 764 46 364 3.76e-46 179
Msa1034400 MtrunA17_Chr3g0122121 33.166 398 207 10 367 742 76 436 1.13e-45 179
Msa1034400 MtrunA17_Chr1g0193221 31.961 413 211 11 392 776 4 374 2.20e-45 178
Msa1034400 MtrunA17_Chr7g0245931 32.546 381 194 9 390 743 51 395 2.30e-45 177
Msa1034400 MtrunA17_Chr3g0145071 36.337 344 174 10 435 770 140 446 6.30e-45 176
Msa1034400 MtrunA17_Chr8g0377731 33.582 402 205 9 392 770 56 418 1.28e-44 176
Msa1034400 MtrunA17_Chr4g0035661 35.920 348 171 10 435 767 130 440 1.92e-44 175
Msa1034400 MtrunA17_Chr4g0062291 32.632 380 198 9 392 752 124 464 2.00e-43 169
Msa1034400 MtrunA17_Chr7g0258991 35.075 402 198 14 386 767 68 426 4.56e-43 170
Msa1034400 MtrunA17_Chr5g0405181 34.930 355 179 12 435 778 69 382 2.97e-40 161
Msa1034400 MtrunA17_Chr6g0483701 31.690 426 226 15 392 799 31 409 1.92e-39 159
Msa1034400 MtrunA17_Chr8g0372171 34.211 380 189 13 435 803 68 397 2.78e-38 155
Msa1034400 MtrunA17_Chr3g0142261 32.951 349 181 9 435 775 67 370 1.59e-37 153
Msa1034400 MtrunA17_Chr4g0070001 33.251 403 195 15 392 774 144 492 4.37e-37 151
Msa1034400 MtrunA17_Chr4g0036001 31.450 407 215 11 383 774 16 373 1.07e-35 146
Msa1034400 MtrunA17_Chr7g0238581 30.260 423 230 13 392 794 26 403 1.37e-33 138
Msa1034400 MtrunA17_Chr1g0192491 45.000 160 78 4 12 168 28 180 1.44e-33 131
Msa1034400 MtrunA17_Chr5g0445211 31.188 404 214 12 391 770 74 437 2.06e-33 139
Msa1034400 MtrunA17_Chr3g0101021 28.877 374 204 11 391 742 75 408 1.26e-31 134
Msa1034400 MtrunA17_Chr2g0331761 28.883 367 207 10 392 745 186 511 1.63e-30 129
Msa1034400 MtrunA17_Chr4g0067421 29.124 388 212 11 378 742 192 539 1.66e-29 126
Msa1034400 MtrunA17_Chr6g0485471 27.957 372 204 10 392 745 116 441 2.79e-28 122
Msa1034400 MtrunA17_Chr2g0295881 30.154 325 171 9 435 742 248 533 7.66e-28 121
Msa1034400 MtrunA17_Chr1g0187411 31.126 302 168 8 458 745 196 471 9.69e-26 114
Msa1034400 MtrunA17_Chr6g0470541 28.041 296 156 10 452 738 69 316 3.58e-17 87.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1034400 AT3G10310.2 51.831 1065 365 21 11 1027 4 968 0.0 955
Msa1034400 AT3G10310.1 53.525 1007 356 20 11 1005 4 910 0.0 943
Msa1034400 AT3G44730.2 44.472 805 360 18 14 774 21 782 0.0 615
Msa1034400 AT3G44730.3 44.472 805 360 18 14 774 21 782 0.0 615
Msa1034400 AT5G27000.1 40.615 943 426 23 2 901 22 873 0.0 613
Msa1034400 AT3G44730.1 44.603 769 341 17 48 774 12 737 0.0 587
Msa1034400 AT3G44730.4 44.603 769 341 17 48 774 12 737 0.0 587
Msa1034400 AT1G09170.4 53.635 509 196 6 303 808 346 817 6.59e-170 520
Msa1034400 AT1G09170.4 42.754 138 69 4 27 161 55 185 6.23e-27 119
Msa1034400 AT1G09170.2 53.635 509 196 6 303 808 346 817 7.07e-169 518
Msa1034400 AT1G09170.2 42.754 138 69 4 27 161 55 185 6.50e-27 119
Msa1034400 AT1G09170.5 51.264 554 213 8 303 838 346 860 1.64e-168 522
Msa1034400 AT1G09170.5 42.754 138 69 4 27 161 55 185 1.05e-26 118
Msa1034400 AT1G09170.3 55.675 467 176 4 303 766 346 784 2.11e-165 507
Msa1034400 AT1G09170.3 42.754 138 69 4 27 161 55 185 8.20e-27 118
Msa1034400 AT1G09170.7 55.675 467 176 4 303 766 346 784 2.11e-165 507
Msa1034400 AT1G09170.7 42.754 138 69 4 27 161 55 185 8.20e-27 118
Msa1034400 AT2G47500.2 57.112 457 164 5 321 774 329 756 1.82e-164 508
Msa1034400 AT2G47500.2 50.676 148 64 3 10 154 28 169 6.06e-36 148
Msa1034400 AT2G47500.1 57.112 457 164 5 321 774 329 756 3.93e-164 509
Msa1034400 AT2G47500.1 50.676 148 64 3 10 154 28 169 6.58e-36 148
Msa1034400 AT1G73860.2 45.270 592 269 7 275 853 300 849 9.31e-160 496
Msa1034400 AT1G73860.1 46.881 561 243 7 306 853 414 932 1.76e-158 495
Msa1034400 AT1G18410.3 49.703 505 221 5 288 789 390 864 2.63e-156 489
Msa1034400 AT1G18410.2 49.703 505 221 5 288 789 390 864 2.63e-156 489
Msa1034400 AT1G18410.4 49.703 505 221 5 288 789 533 1007 8.02e-154 486
Msa1034400 AT1G63640.2 50.398 502 204 5 313 802 394 862 3.04e-151 477
Msa1034400 AT1G63640.5 50.797 502 209 6 313 802 384 859 3.91e-151 477
Msa1034400 AT1G63640.1 50.797 502 209 6 313 802 394 869 5.07e-151 477
Msa1034400 AT1G63640.4 50.797 502 209 6 313 802 394 869 5.07e-151 477
Msa1034400 AT1G63640.3 50.797 502 209 6 313 802 394 869 5.53e-151 477
Msa1034400 AT1G18410.1 49.703 505 213 6 288 789 533 999 7.33e-151 478
Msa1034400 AT1G18410.5 51.255 478 192 6 288 762 380 819 1.98e-150 473
Msa1034400 AT1G09170.6 53.790 409 158 4 303 708 346 726 8.89e-135 424
Msa1034400 AT1G09170.6 42.754 138 69 4 27 161 55 185 6.02e-27 118
Msa1034400 AT1G09170.8 53.790 409 158 4 303 708 346 726 8.89e-135 424
Msa1034400 AT1G09170.8 42.754 138 69 4 27 161 55 185 6.02e-27 118
Msa1034400 AT2G22610.2 46.269 402 172 7 372 764 395 761 4.98e-98 334
Msa1034400 AT2G22610.3 46.269 402 172 7 372 764 396 762 5.68e-98 334
Msa1034400 AT2G22610.1 46.269 402 172 7 372 764 395 761 6.63e-98 334
Msa1034400 AT5G27550.2 44.665 403 184 7 371 767 112 481 4.20e-94 316
Msa1034400 AT5G27550.1 44.665 403 184 7 371 767 112 481 4.20e-94 316
Msa1034400 AT1G72250.1 40.789 456 236 6 322 774 425 849 3.06e-89 311
Msa1034400 AT1G72250.2 42.202 436 218 6 342 774 454 858 3.63e-89 311
Msa1034400 AT1G72250.3 42.202 436 218 6 342 774 466 870 4.18e-89 311
Msa1034400 AT1G72250.4 42.202 436 218 6 342 774 465 869 4.61e-89 311
Msa1034400 AT1G09170.1 51.393 323 128 6 534 838 513 824 4.51e-83 291
Msa1034400 AT1G09170.1 49.289 211 104 2 303 511 346 555 1.75e-55 209
Msa1034400 AT1G09170.1 42.754 138 69 4 27 161 55 185 1.19e-26 118
Msa1034400 AT5G54670.3 38.667 450 231 11 314 748 260 679 1.43e-81 280
Msa1034400 AT5G54670.1 38.667 450 231 11 314 748 320 739 2.69e-81 281
Msa1034400 AT5G54670.2 38.667 450 231 11 314 748 320 739 2.69e-81 281
Msa1034400 AT4G27180.1 39.509 448 230 12 313 747 310 729 4.93e-81 280
Msa1034400 AT4G27180.2 39.509 448 230 12 313 747 310 729 4.93e-81 280
Msa1034400 AT4G21270.1 40.153 391 192 8 379 753 419 783 1.47e-73 260
Msa1034400 AT4G05190.1 40.155 386 189 9 379 748 416 775 1.36e-72 257
Msa1034400 AT4G05190.2 40.155 386 189 9 379 748 403 762 2.14e-72 256
Msa1034400 AT1G55550.1 37.939 427 216 11 379 797 79 464 2.14e-67 243
Msa1034400 AT5G65930.2 37.825 423 212 9 327 742 831 1209 2.45e-66 244
Msa1034400 AT5G65930.1 37.825 423 212 9 327 742 830 1208 2.55e-66 244
Msa1034400 AT5G65930.3 37.825 423 212 9 327 742 837 1215 3.99e-66 244
Msa1034400 AT5G27950.1 34.127 378 217 9 369 743 57 405 1.03e-56 208
Msa1034400 AT3G17360.1 38.418 354 170 9 435 770 210 533 1.61e-56 214
Msa1034400 AT3G17360.2 38.418 354 170 9 435 770 210 533 1.71e-56 214
Msa1034400 AT3G17360.3 38.418 354 170 9 435 770 210 533 1.89e-56 214
Msa1034400 AT5G10470.1 33.243 367 204 7 374 738 125 452 8.21e-56 212
Msa1034400 AT5G10470.2 33.243 367 204 7 374 738 125 452 8.60e-56 211
Msa1034400 AT3G19050.1 35.949 395 195 10 391 763 193 551 1.26e-55 212
Msa1034400 AT5G65460.6 29.314 481 276 13 264 738 26 448 1.68e-54 207
Msa1034400 AT5G65460.2 29.314 481 276 13 264 738 26 448 2.19e-54 207
Msa1034400 AT5G65460.1 29.314 481 276 13 264 738 26 448 2.64e-54 207
Msa1034400 AT5G65460.4 29.314 481 276 13 264 738 26 448 2.80e-54 207
Msa1034400 AT5G65460.3 29.132 484 280 13 264 738 26 455 4.43e-54 206
Msa1034400 AT3G44050.1 36.571 350 176 6 435 767 135 455 3.56e-52 200
Msa1034400 AT5G47820.2 31.027 477 275 14 391 831 11 469 3.67e-52 199
Msa1034400 AT5G47820.1 31.027 477 275 14 391 831 11 469 3.67e-52 199
Msa1034400 AT5G60930.2 35.180 361 201 11 431 770 41 389 1.24e-51 199
Msa1034400 AT5G60930.3 35.180 361 201 11 431 770 41 389 1.28e-51 198
Msa1034400 AT5G60930.1 35.180 361 201 11 431 770 41 389 1.32e-51 198
Msa1034400 AT2G37420.1 37.231 325 162 8 433 742 93 390 2.88e-50 193
Msa1034400 AT2G37420.2 37.231 325 162 8 433 742 93 390 2.88e-50 193
Msa1034400 AT2G28620.1 35.817 349 185 8 433 763 95 422 1.47e-49 191
Msa1034400 AT2G28620.3 35.817 349 185 8 433 763 95 422 1.49e-49 191
Msa1034400 AT2G28620.2 35.817 349 185 8 433 763 95 422 1.49e-49 191
Msa1034400 AT2G36200.1 35.241 332 164 8 433 742 57 359 3.05e-49 190
Msa1034400 AT2G36200.2 35.241 332 164 8 433 742 57 359 3.83e-49 190
Msa1034400 AT3G45850.2 32.995 394 222 10 391 763 55 427 6.73e-49 189
Msa1034400 AT3G45850.1 32.995 394 222 10 391 763 55 427 6.73e-49 189
Msa1034400 AT3G49650.1 32.432 407 215 8 392 774 15 385 2.52e-48 186
Msa1034400 AT3G23670.1 35.385 390 185 10 392 758 97 442 7.85e-48 186
Msa1034400 AT3G23670.2 35.385 390 185 10 392 758 97 442 8.89e-48 185
Msa1034400 AT4G14150.1 34.359 390 189 10 392 758 92 437 2.81e-47 185
Msa1034400 AT3G50240.2 34.167 360 188 11 435 761 64 407 4.15e-46 180
Msa1034400 AT3G50240.1 34.167 360 188 11 435 761 64 407 8.02e-46 179
Msa1034400 AT3G50240.4 34.167 360 188 11 435 761 64 407 9.52e-46 179
Msa1034400 AT1G18550.1 34.748 377 173 10 392 742 152 481 9.75e-46 177
Msa1034400 AT5G06670.8 36.467 351 167 12 435 767 107 419 2.84e-45 176
Msa1034400 AT5G06670.4 36.467 351 167 12 435 767 107 419 2.84e-45 176
Msa1034400 AT5G06670.7 36.467 351 167 12 435 767 107 419 2.84e-45 176
Msa1034400 AT5G06670.5 36.467 351 167 12 435 767 107 419 2.96e-45 176
Msa1034400 AT1G59540.1 35.920 348 171 12 437 770 46 355 3.11e-45 176
Msa1034400 AT3G54870.1 35.385 325 160 7 435 742 150 441 3.42e-45 177
Msa1034400 AT3G54870.3 35.385 325 160 7 435 742 150 441 3.56e-45 177
Msa1034400 AT3G54870.2 35.385 325 160 7 435 742 150 441 4.61e-45 177
Msa1034400 AT5G06670.2 36.467 351 167 12 435 767 107 419 5.37e-45 177
Msa1034400 AT5G06670.3 36.467 351 167 12 435 767 107 419 5.37e-45 177
Msa1034400 AT1G12430.1 33.421 380 188 10 392 743 71 413 1.25e-44 175
Msa1034400 AT1G12430.2 33.421 380 188 10 392 743 71 413 1.34e-44 175
Msa1034400 AT2G21380.2 35.942 345 174 11 435 770 145 451 1.46e-44 176
Msa1034400 AT2G21380.1 35.942 345 174 11 435 770 145 451 1.46e-44 176
Msa1034400 AT1G01950.1 32.984 382 191 10 390 743 59 403 6.03e-44 173
Msa1034400 AT1G01950.2 32.984 382 191 10 390 743 59 403 6.48e-44 172
Msa1034400 AT1G01950.3 32.984 382 191 10 390 743 59 403 8.90e-44 172
Msa1034400 AT4G39050.1 35.277 343 179 9 435 770 139 445 1.06e-43 173
Msa1034400 AT3G12020.4 36.103 349 171 11 435 767 110 422 1.21e-43 172
Msa1034400 AT3G12020.1 36.103 349 171 11 435 767 110 422 1.21e-43 172
Msa1034400 AT3G63480.2 33.728 338 182 6 435 764 48 351 1.82e-43 165
Msa1034400 AT1G21730.1 35.753 372 185 12 388 748 72 400 2.15e-43 171
Msa1034400 AT5G06670.6 35.833 360 166 13 435 767 107 428 2.15e-43 172
Msa1034400 AT5G06670.1 35.833 360 166 13 435 767 107 428 2.15e-43 172
Msa1034400 AT3G12020.3 36.103 349 171 11 435 767 110 422 2.32e-43 172
Msa1034400 AT3G12020.2 36.103 349 171 11 435 767 110 422 2.32e-43 172
Msa1034400 AT3G63480.1 33.626 342 181 7 435 764 48 355 2.43e-42 162
Msa1034400 AT4G24170.1 33.046 348 183 6 435 775 50 354 2.14e-41 165
Msa1034400 AT4G24170.2 33.046 348 183 6 435 775 50 354 2.14e-41 165
Msa1034400 AT3G10180.1 31.990 397 202 11 392 763 4 357 3.10e-40 162
Msa1034400 AT3G10180.2 31.990 397 202 11 392 763 4 357 3.20e-40 162
Msa1034400 AT1G18370.1 34.277 318 157 9 435 742 78 353 4.12e-40 161
Msa1034400 AT3G43210.3 33.594 384 192 14 392 760 30 365 5.48e-39 157
Msa1034400 AT3G43210.5 33.594 384 192 14 392 760 30 365 5.48e-39 157
Msa1034400 AT3G43210.2 33.594 384 192 14 392 760 30 365 5.48e-39 157
Msa1034400 AT3G43210.4 33.594 384 192 14 392 760 30 365 5.48e-39 157
Msa1034400 AT3G43210.1 33.594 384 192 14 392 760 30 365 5.48e-39 157
Msa1034400 AT2G21300.2 32.345 371 191 10 420 775 49 374 9.68e-38 153
Msa1034400 AT2G21300.4 32.345 371 191 10 420 775 49 374 9.68e-38 153
Msa1034400 AT2G21300.3 32.345 371 191 10 420 775 49 374 9.68e-38 153
Msa1034400 AT2G21300.1 32.345 371 191 10 420 775 49 374 9.68e-38 153
Msa1034400 AT2G21300.5 32.345 371 191 10 420 775 49 374 9.68e-38 153
Msa1034400 AT3G50240.3 35.110 319 160 10 474 761 3 305 9.87e-38 153
Msa1034400 AT4G38950.3 31.903 373 188 12 420 774 38 362 1.47e-37 152
Msa1034400 AT4G38950.5 31.903 373 188 12 420 774 38 362 1.47e-37 152
Msa1034400 AT4G38950.4 31.903 373 188 12 420 774 38 362 1.47e-37 152
Msa1034400 AT4G38950.1 31.903 373 188 12 420 774 38 362 1.47e-37 152
Msa1034400 AT4G38950.2 31.903 373 188 12 420 774 38 362 1.47e-37 152
Msa1034400 AT5G66310.2 34.097 349 177 10 435 775 67 370 1.88e-37 153
Msa1034400 AT5G66310.3 34.097 349 177 10 435 775 67 370 1.88e-37 153
Msa1034400 AT5G66310.1 34.097 349 177 10 435 775 67 370 1.88e-37 153
Msa1034400 AT3G51150.1 33.524 349 179 10 435 775 66 369 3.88e-37 152
Msa1034400 AT3G51150.2 33.524 349 179 10 435 775 66 369 4.20e-37 152
Msa1034400 AT3G51150.4 33.524 349 179 10 435 775 66 369 4.20e-37 152
Msa1034400 AT3G51150.3 33.524 349 179 10 435 775 66 369 4.20e-37 152
Msa1034400 AT3G16060.1 30.025 393 218 10 392 771 170 518 2.94e-35 144
Msa1034400 AT1G59540.2 35.593 295 143 10 489 770 3 263 2.42e-34 142
Msa1034400 AT1G01950.4 33.673 294 143 5 470 743 1 262 9.20e-34 140
Msa1034400 AT3G20150.1 31.044 364 190 13 435 771 136 465 3.47e-31 133
Msa1034400 AT3G20150.2 31.044 364 190 13 435 771 136 465 3.83e-31 132
Msa1034400 AT3G16630.2 30.481 374 196 13 392 742 194 526 1.09e-29 127
Msa1034400 AT3G16630.1 30.481 374 196 13 392 742 194 526 1.09e-29 127
Msa1034400 AT5G02370.1 28.493 365 196 10 391 738 20 336 1.27e-29 125
Msa1034400 AT5G27950.2 34.109 258 146 7 489 743 3 239 3.55e-29 122
Msa1034400 AT4G14330.1 30.091 329 187 11 431 752 85 377 9.22e-28 121
Msa1034400 AT5G42490.2 31.538 260 126 8 435 685 56 272 6.09e-25 112
Msa1034400 AT5G42490.1 31.538 260 126 8 435 685 56 272 6.27e-25 112
Msa1034400 AT5G65460.5 33.333 225 113 6 516 738 13 202 7.58e-23 105
Msa1034400 AT3G51150.5 38.251 183 101 4 600 775 39 216 3.99e-22 103

Find 221 sgRNAs with CRISPR-Local

Find 451 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGAATTGCCATTGCTTAAT+TGG 0.142478 7_1:+69858519 None:intergenic
TCAGTTTCCCAATTGTTCTT+AGG 0.202993 7_1:+69858264 None:intergenic
GGATATGGGAATCAATTATT+TGG 0.219731 7_1:-69860070 Msa1034400:CDS
GTAGATCATGTGGGTGAATT+TGG 0.227042 7_1:+69858414 None:intergenic
TTTAGCTTTGACACTGCTTC+TGG 0.228403 7_1:+69858545 None:intergenic
GCAGAATCAGACCTACATTT+AGG 0.232671 7_1:-69860638 Msa1034400:CDS
TCCATCACTGATCTAATTAA+TGG 0.242800 7_1:+69860347 None:intergenic
TTGTGAGAAGGGTTGGTTTA+GGG 0.243375 7_1:+69864446 None:intergenic
TTGAAGAATGAATATGAAAA+AGG 0.248047 7_1:+69859913 None:intergenic
TTATCTAGCATTTGTGCTTC+AGG 0.257503 7_1:+69858383 None:intergenic
CACTGGTTTCTTTGTTCATC+CGG 0.268183 7_1:+69859028 None:intergenic
GGGTTTCCACTGTGGATCTT+GGG 0.268846 7_1:-69859056 Msa1034400:CDS
CGATCTTTCTGTTGAGATAT+TGG 0.269725 7_1:+69858581 None:intergenic
AGGGTTTCCACTGTGGATCT+TGG 0.273644 7_1:-69859057 Msa1034400:CDS
GCCTATAACCTTAGCTGTTA+TGG 0.274854 7_1:+69858319 None:intergenic
ACCAGGATGAATCTTGTTAA+TGG 0.275943 7_1:+69863914 None:intergenic
ATGCAGAAACCAACAAATTA+TGG 0.286924 7_1:-69858132 Msa1034400:intron
TGTACTCAGATGAGGTTTAT+AGG 0.290281 7_1:-69860379 Msa1034400:intron
AACAAGTCTCTTTCCTGTTT+GGG 0.298943 7_1:-69859364 Msa1034400:CDS
ACAATTGGGAAACTGATTAA+TGG 0.305518 7_1:-69858257 Msa1034400:CDS
GTTTAGGACAAGCTCCAATT+TGG 0.305889 7_1:-69857513 Msa1034400:three_prime_UTR
GAAAACTGTTTCAGTTTAAT+CGG 0.306233 7_1:-69860530 Msa1034400:CDS
ATTGTATTCTATCACTTAAA+TGG 0.307613 7_1:-69863224 Msa1034400:CDS
AGGAGGAACATCCAAGGATA+TGG 0.308260 7_1:-69860085 Msa1034400:CDS
TAACAAGTCTCTTTCCTGTT+TGG 0.313852 7_1:-69859365 Msa1034400:CDS
GGCCTCTCACTAGCTGCTAT+TGG 0.314020 7_1:+69858053 None:intergenic
GCTTATGGTCAAACTGGATC+TGG 0.315266 7_1:-69860302 Msa1034400:CDS
TTCTTAGGGATCTTCTAAAC+TGG 0.315436 7_1:+69858279 None:intergenic
ATGGAGAATTGTTCAAGAAA+TGG 0.328204 7_1:-69864243 Msa1034400:CDS
AAATTTGTGGGACACGTTCT+TGG 0.332808 7_1:+69864538 None:intergenic
CAGTTTCCCAATTGTTCTTA+GGG 0.334957 7_1:+69858265 None:intergenic
AAGACTGTAGTTGATTTCAT+TGG 0.341996 7_1:-69860606 Msa1034400:CDS
ATTTGTGCTTCAGGTGTTTC+AGG 0.343345 7_1:+69858392 None:intergenic
AGAAGATCCCTAAGAACAAT+TGG 0.343400 7_1:-69858272 Msa1034400:CDS
CTCTGATGCATGTAGGCGTT+TGG 0.346921 7_1:-69863088 Msa1034400:CDS
CTTGTTTCTTGCTTGAGAAA+TGG 0.350549 7_1:-69863954 Msa1034400:CDS
AGAATTCTCACATTCCTTAC+AGG 0.355383 7_1:-69859315 Msa1034400:CDS
GTACTCAGATGAGGTTTATA+GGG 0.359129 7_1:-69860378 Msa1034400:intron
TTTGTCTACTCTTTCACTTC+CGG 0.360943 7_1:+69859429 None:intergenic
CAGAATCAGACCTACATTTA+GGG 0.363816 7_1:-69860637 Msa1034400:CDS
GGGAGTATTATGCTTTGGTT+CGG 0.366873 7_1:+69864467 None:intergenic
GGGTGAGTTGTGAGAAGGGT+TGG 0.368358 7_1:+69864439 None:intergenic
AGACTGTAGTTGATTTCATT+GGG 0.369878 7_1:-69860605 Msa1034400:CDS
AAGAAAGCATACTTCTTATC+AGG 0.371962 7_1:+69858233 None:intergenic
TGGAGAATTGTTCAAGAAAT+GGG 0.371966 7_1:-69864242 Msa1034400:CDS
GAAGCAGTGTCAAAGCTAAA+TGG 0.372499 7_1:-69858542 Msa1034400:CDS
ATCAGCTTTCACAGGTTTGT+TGG 0.376128 7_1:+69858721 None:intergenic
TCACCAAAGGAATCTGCTTC+GGG 0.380680 7_1:+69859108 None:intergenic
TCACTTCAACCATAATTTGT+TGG 0.381463 7_1:+69858123 None:intergenic
CATTGTAAATCTCGACCATT+TGG 0.382291 7_1:+69859983 None:intergenic
CAGTCAAAATCTGATTAAAT+AGG 0.382759 7_1:+69862181 None:intergenic
GCTAGAACTGACTCTAGTTT+AGG 0.384627 7_1:-69857529 Msa1034400:three_prime_UTR
GTCAAGGGAAGCAGCACTTA+TGG 0.388579 7_1:-69858092 Msa1034400:CDS
TTCACCAAAGGAATCTGCTT+CGG 0.391230 7_1:+69859107 None:intergenic
CAAGCTTAATCTTCTTGAAC+GGG 0.394044 7_1:+69858664 None:intergenic
AGTGTCTGATTCTGTAGGTT+TGG 0.394411 7_1:+69861516 None:intergenic
GTTGTGAGAAGGGTTGGTTT+AGG 0.397956 7_1:+69864445 None:intergenic
TGTTTGCCAATGCAATCTTA+AGG 0.402264 7_1:+69858855 None:intergenic
TCCATAACAGCTAAGGTTAT+AGG 0.403022 7_1:-69858320 Msa1034400:CDS
CTGTGGATCTTGGGGCTGCC+CGG 0.404032 7_1:-69859047 Msa1034400:CDS
GGAGTATTATGCTTTGGTTC+GGG 0.404311 7_1:+69864468 None:intergenic
TTTAGGGGAGTATTATGCTT+TGG 0.408564 7_1:+69864462 None:intergenic
GTTATAGGCACAAATGGAAA+AGG 0.412952 7_1:-69858305 Msa1034400:CDS
TGATACATGTTCGTAGGACT+TGG 0.413437 7_1:+69858470 None:intergenic
CTCTAATGTGAGGTCAGTTA+AGG 0.415756 7_1:+69859786 None:intergenic
AATTTGTGGGACACGTTCTT+GGG 0.420719 7_1:+69864539 None:intergenic
TGGTTTGAATTCAAATTTGT+GGG 0.420796 7_1:+69864526 None:intergenic
CATTACAACAATCCCTTGCT+TGG 0.426772 7_1:-69863704 Msa1034400:CDS
GCAACTGCGAATGCAGTTCC+CGG 0.426944 7_1:+69859471 None:intergenic
TACTCTGAAGTTTGCTCAGA+GGG 0.429330 7_1:-69859076 Msa1034400:CDS
CATACGGTCAACGAGCATAT+TGG 0.430481 7_1:+69862384 None:intergenic
CGTGATCACATCTCCCAAAC+AGG 0.431156 7_1:+69859351 None:intergenic
ATGTTGCAGAGTGGTCCTTC+AGG 0.432220 7_1:-69860105 Msa1034400:intron
GTTCTACTGCAATCAACAAT+AGG 0.433640 7_1:-69859648 Msa1034400:CDS
TTGATTGATTGCAAAACTAA+AGG 0.442750 7_1:+69863144 None:intergenic
GAAAACCAAGTGGGTCCTCT+TGG 0.443644 7_1:-69864005 Msa1034400:CDS
AGAGTCAGTTCTAGCCTTGT+TGG 0.444108 7_1:+69857537 None:intergenic
ATAATTGATTCCCATATCCT+TGG 0.445791 7_1:+69860074 None:intergenic
GCTAAGGTTATAGGCACAAA+TGG 0.447822 7_1:-69858311 Msa1034400:CDS
ACCTCAGGGAACTTCATAGA+TGG 0.448893 7_1:+69862141 None:intergenic
ATTACAACAATCCCTTGCTT+GGG 0.452765 7_1:-69863703 Msa1034400:CDS
CTTCATTTAGTAGACCTTGC+CGG 0.453682 7_1:-69859448 Msa1034400:CDS
AGCCATCATCGTTGCAGCTC+CGG 0.457003 7_1:+69859761 None:intergenic
GGGTGGGTGAGTTGTGAGAA+GGG 0.457480 7_1:+69864435 None:intergenic
TTTGGATTTGTCTGCAACAT+CGG 0.462506 7_1:-69863070 Msa1034400:CDS
AATGAAATCAACTACAGTCT+TGG 0.464057 7_1:+69860608 None:intergenic
TTCTCTTCGCAATGGAAACC+TGG 0.465157 7_1:-69862323 Msa1034400:intron
TGTGAGAAGGGTTGGTTTAG+GGG 0.467587 7_1:+69864447 None:intergenic
AATTAAGCAATGGCAATTCC+AGG 0.475466 7_1:-69858517 Msa1034400:CDS
ACTGGTTTCTTTGTTCATCC+GGG 0.479265 7_1:+69859029 None:intergenic
CTTTCTGAACGAACAGGAGG+AGG 0.480863 7_1:+69857612 None:intergenic
TTGAAGCTTCTGATCTTGAA+AGG 0.482629 7_1:-69863596 Msa1034400:CDS
CAAGCAAGGGATTGTTGTAA+TGG 0.484842 7_1:+69863705 None:intergenic
GTTATGACCCTCATGAAACT+TGG 0.487406 7_1:-69859691 Msa1034400:CDS
GTACTTACTGTGCATGTTAG+TGG 0.489613 7_1:-69859505 Msa1034400:CDS
GTTAGTGGCAAAGATACATC+CGG 0.489788 7_1:-69859490 Msa1034400:CDS
TAAGTGCTGCTTCCCTTGAC+AGG 0.491704 7_1:+69858095 None:intergenic
TGAAGCTTCTGATCTTGAAA+GGG 0.492772 7_1:-69863595 Msa1034400:intron
TTCTCAATACTAAGTCTTCG+TGG 0.493322 7_1:+69858761 None:intergenic
GTATGAAATTTATGTCCAAA+TGG 0.494333 7_1:-69859998 Msa1034400:CDS
AGTCCCGAAGCAGATTCCTT+TGG 0.494542 7_1:-69859111 Msa1034400:CDS
CGGGTTACGAACCTGAGGTA+TGG 0.494930 7_1:+69864487 None:intergenic
ATACAGTGTAGAGCTTGCTC+TGG 0.495239 7_1:-69861238 Msa1034400:intron
ATGGTTTGAATTCAAATTTG+TGG 0.498378 7_1:+69864525 None:intergenic
GAAGATCCCTAAGAACAATT+GGG 0.498477 7_1:-69858271 Msa1034400:CDS
CCAAGCTTAATCTTCTTGAA+CGG 0.500360 7_1:+69858663 None:intergenic
GTCTTGCTTTCTGAACGAAC+AGG 0.502445 7_1:+69857606 None:intergenic
TTTCAGGAAAGTGTAGAGAA+TGG 0.502521 7_1:-69863267 Msa1034400:intron
CTTATGGTCAAACTGGATCT+GGG 0.503379 7_1:-69860301 Msa1034400:CDS
GGTTTCCACTGTGGATCTTG+GGG 0.506848 7_1:-69859055 Msa1034400:CDS
ATCCGGAGCTGCAACGATGA+TGG 0.507146 7_1:-69859763 Msa1034400:CDS
ATACTAGATATAAAATTTCA+AGG 0.508484 7_1:-69857392 Msa1034400:three_prime_UTR
TTGATTGTTGATGATCATGA+TGG 0.509054 7_1:-69864262 Msa1034400:exon
AAATACTGATATGCAGGTAA+AGG 0.509302 7_1:+69863672 None:intergenic
TTTCTTTGGCATAAAGCATA+CGG 0.511185 7_1:+69862368 None:intergenic
ACTCTACCTTGGCCAGCTGT+TGG 0.512774 7_1:+69860498 None:intergenic
TTTAAGTTGCATAACCTCAC+TGG 0.514300 7_1:+69859011 None:intergenic
TGAAGTGAAGTCACCTGTCA+AGG 0.515266 7_1:-69858108 Msa1034400:CDS
AAACGGTGGCTATAGACAAC+AGG 0.516688 7_1:-69857579 Msa1034400:exon
ACTGACCGCAATCTAGCATC+AGG 0.516943 7_1:+69859730 None:intergenic
GGTGTTTCAGGTAGATCATG+TGG 0.518073 7_1:+69858404 None:intergenic
GAGATGTCAACCAAAGCTCT+TGG 0.518239 7_1:-69860836 Msa1034400:CDS
TCATCCTGGTGCAGTACCTA+AGG 0.521318 7_1:-69863901 Msa1034400:intron
GTGAGTTTGCTGTTCCTGTA+AGG 0.523039 7_1:+69859301 None:intergenic
TACATGTTCGTAGGACTTGG+AGG 0.524430 7_1:+69858473 None:intergenic
AGTGTAGAGAATGGTTCTGC+AGG 0.525095 7_1:-69863258 Msa1034400:CDS
CTACTCTTTCACTTCCGGCA+AGG 0.525218 7_1:+69859434 None:intergenic
AGGACAAGCTCCAATTTGGT+TGG 0.527358 7_1:-69857509 Msa1034400:three_prime_UTR
ACCATTAATTAGATCAGTGA+TGG 0.530145 7_1:-69860348 Msa1034400:CDS
TCAAGAAAAGCTGAAGAAGC+AGG 0.530188 7_1:-69864198 Msa1034400:intron
AGATCAGAAGCTTCAAAAGC+GGG 0.530626 7_1:+69863603 None:intergenic
CGGCAAGGTCTACTAAATGA+AGG 0.531186 7_1:+69859449 None:intergenic
TGAGAACCTTAAGATTGCAT+TGG 0.533937 7_1:-69858861 Msa1034400:CDS
GGAGGAACATCCAAGGATAT+GGG 0.535551 7_1:-69860084 Msa1034400:CDS
CTTGAACGGGCTATATAAGA+AGG 0.539423 7_1:+69858677 None:intergenic
TCTTAGGGATCTTCTAAACT+GGG 0.539898 7_1:+69858280 None:intergenic
TCTTTAGTTCTATTGAACAT+TGG 0.541463 7_1:+69858818 None:intergenic
CTGACCTCACATTAGAGATC+CGG 0.542547 7_1:-69859780 Msa1034400:CDS
TAAGATTGCATTGGCAAACA+AGG 0.542669 7_1:-69858852 Msa1034400:CDS
CTGTTTGGGAGATGTGATCA+CGG 0.543710 7_1:-69859350 Msa1034400:CDS
GCCATTAACAAGATTCATCC+TGG 0.545779 7_1:-69863915 Msa1034400:CDS
TGGGTGGGTGAGTTGTGAGA+AGG 0.546697 7_1:+69864434 None:intergenic
GTAGACAAATCTGAAGTCAC+AGG 0.547966 7_1:-69859415 Msa1034400:CDS
TCCTTGGATGTTCCTCCTGA+AGG 0.549961 7_1:+69860090 None:intergenic
TCAAATGTCTAGTGAAAGGA+AGG 0.552457 7_1:-69860031 Msa1034400:CDS
GTTGATTTCATTGGGGAAGA+CGG 0.552835 7_1:-69860597 Msa1034400:CDS
TTATAGGCACAAATGGAAAA+GGG 0.558965 7_1:-69858304 Msa1034400:CDS
TGCTCAGAGGGTTTCCACTG+TGG 0.560630 7_1:-69859064 Msa1034400:CDS
TCAAGAAGATTAAGCTTGGA+AGG 0.560886 7_1:-69858659 Msa1034400:CDS
TTTGACATGCAACTCTGACC+TGG 0.563977 7_1:+69858499 None:intergenic
GAAACAAGTTCTCTCTCAGT+AGG 0.565148 7_1:+69863969 None:intergenic
TGCTGAGTCCATAACAGCTA+AGG 0.565413 7_1:-69858327 Msa1034400:CDS
TTGGATTCAGCCCTAAATGT+AGG 0.565651 7_1:+69860627 None:intergenic
TGTTTCAAATGTCTAGTGAA+AGG 0.567801 7_1:-69860035 Msa1034400:CDS
GAGAAAGTGTCTGATTCTGT+AGG 0.571137 7_1:+69861511 None:intergenic
GGTTATGCAACTTAAAGCAC+AGG 0.573547 7_1:-69859004 Msa1034400:intron
GTTACGATCATTCACTCAGC+GGG 0.575475 7_1:-69864562 None:intergenic
TTAATTAGATCAGTGATGGA+TGG 0.576784 7_1:-69860344 Msa1034400:CDS
TTTGGTCCAACAGCTGGCCA+AGG 0.577990 7_1:-69860504 Msa1034400:intron
GTATATCTATGAGATGCTTG+TGG 0.578205 7_1:+69861200 None:intergenic
ACGTTACAAAACCATACCTC+AGG 0.584513 7_1:-69864498 Msa1034400:five_prime_UTR
CTCTGCACGTCAAAATCCCA+AGG 0.592562 7_1:-69861491 Msa1034400:intron
CATTACCCTCTGATGCATGT+AGG 0.592612 7_1:-69863095 Msa1034400:CDS
ATATTCCAAGAGGACCCACT+TGG 0.593663 7_1:+69864000 None:intergenic
CCGTTCAAGAAGATTAAGCT+TGG 0.596933 7_1:-69858663 Msa1034400:CDS
AGGCTGAGAATCCCAAGCAA+GGG 0.597069 7_1:+69863692 None:intergenic
AGTCACAGGAGATAGACTAA+AGG 0.599146 7_1:-69859401 Msa1034400:CDS
ATGGACTCAGCAATGTCACT+TGG 0.599894 7_1:+69858338 None:intergenic
TCTCAATACTAAGTCTTCGT+GGG 0.601583 7_1:+69858762 None:intergenic
ATCAGAGGGTAATGCAGTAG+TGG 0.602322 7_1:+69863104 None:intergenic
TAACCTCTCCAAGTTTCATG+AGG 0.604030 7_1:+69859683 None:intergenic
CAAACGCCTACATGCATCAG+AGG 0.604438 7_1:+69863089 None:intergenic
CTACGAACATGTATCAGAAG+AGG 0.606125 7_1:-69858463 Msa1034400:CDS
TATGCCAAAGAAAATATCGA+TGG 0.609731 7_1:-69862358 Msa1034400:CDS
ACTGCTTCTGGATCTTGCTG+TGG 0.613587 7_1:+69858557 None:intergenic
TTGCTTTCTGAACGAACAGG+AGG 0.614772 7_1:+69857609 None:intergenic
GAAGTGAAGTCACCTGTCAA+GGG 0.614987 7_1:-69858107 Msa1034400:CDS
AAGGCTGAGAATCCCAAGCA+AGG 0.615998 7_1:+69863691 None:intergenic
CTAAATGGCCAATTAAGCAA+TGG 0.616196 7_1:-69858527 Msa1034400:CDS
CTTAGTATTGAGAATTGCAG+CGG 0.622695 7_1:-69858752 Msa1034400:CDS
GACGTTATGAAGCAACCCAA+TGG 0.623526 7_1:-69864031 Msa1034400:CDS
AACATGGTCCAAGATTTGAA+AGG 0.626815 7_1:-69860776 Msa1034400:intron
ACTGGATGCAGCAGAAACTG+TGG 0.628725 7_1:-69862416 Msa1034400:intron
CAGAAAGCAAGACTTCGAAA+CGG 0.631357 7_1:-69857596 Msa1034400:CDS
AAGATCAGAAGCTTCAAAAG+CGG 0.634490 7_1:+69863602 None:intergenic
GCCTTCCTGATGCTAGATTG+CGG 0.636993 7_1:-69859735 Msa1034400:CDS
TTACTTGAAGCACACCAACA+AGG 0.637997 7_1:-69857551 Msa1034400:three_prime_UTR
GACCCTCATGAAACTTGGAG+AGG 0.638012 7_1:-69859686 Msa1034400:CDS
TTGCAGAGTGGTCCTTCAGG+AGG 0.638600 7_1:-69860102 Msa1034400:intron
AGTAAGAGATCTACTTGCAG+AGG 0.640969 7_1:-69859956 Msa1034400:CDS
TGGTTCGGGTTACGAACCTG+AGG 0.641002 7_1:+69864482 None:intergenic
GTAGGTTTGGAAGTGAAATG+AGG 0.641850 7_1:+69861529 None:intergenic
AGTACTCACTGTTTCACCAA+AGG 0.643179 7_1:+69859095 None:intergenic
ATCTGGGAAGACTCACACAA+TGG 0.644722 7_1:-69860285 Msa1034400:intron
AACCTCTCCAAGTTTCATGA+GGG 0.645480 7_1:+69859684 None:intergenic
GACTGTAGTTGATTTCATTG+GGG 0.649147 7_1:-69860604 Msa1034400:CDS
CTCTTCTGATACATGTTCGT+AGG 0.652350 7_1:+69858464 None:intergenic
AAGCAGATGAGCAATCAAAG+TGG 0.652540 7_1:-69863189 Msa1034400:CDS
TTAGTGGCAAAGATACATCC+GGG 0.653146 7_1:-69859489 Msa1034400:CDS
TGAACATTACTCTCAGCAGG+AGG 0.655015 7_1:+69863039 None:intergenic
ACCGCAATCTAGCATCAGGA+AGG 0.656775 7_1:+69859734 None:intergenic
GTACTCTGAAGTTTGCTCAG+AGG 0.660610 7_1:-69859077 Msa1034400:CDS
CAATGGCTTGAAAACCAAGT+GGG 0.663083 7_1:-69864014 Msa1034400:CDS
AATACCTTAGGTACTGCACC+AGG 0.663806 7_1:+69863897 None:intergenic
GTGTTTCAGGTAGATCATGT+GGG 0.666598 7_1:+69858405 None:intergenic
TCCTTCAGGAGGAACATCCA+AGG 0.668293 7_1:-69860091 Msa1034400:CDS
GAACAGAAAGCTATACAACA+TGG 0.675317 7_1:-69860792 Msa1034400:CDS
AAACGCCTACATGCATCAGA+GGG 0.680840 7_1:+69863090 None:intergenic
CCAATGGCTTGAAAACCAAG+TGG 0.687606 7_1:-69864015 Msa1034400:CDS
GGCAGCCCCAAGATCCACAG+TGG 0.688756 7_1:+69859050 None:intergenic
GGTTGATGTGATATTCCAAG+AGG 0.690556 7_1:+69863990 None:intergenic
AGCTCCGGATCTCTAATGTG+AGG 0.694251 7_1:+69859776 None:intergenic
TTGCAGTAGAACTGACAGCA+CGG 0.699807 7_1:+69859659 None:intergenic
AAAGCAAGACTTCGAAACGG+TGG 0.700538 7_1:-69857593 Msa1034400:CDS
GCGGTCAGTGAACTCTACAA+CGG 0.707039 7_1:-69859716 Msa1034400:CDS
GGTTTGGAAGTGAAATGAGG+TGG 0.725205 7_1:+69861532 None:intergenic
ATAGGAGTAGTCGTTCACAC+AGG 0.748839 7_1:-69859630 Msa1034400:intron
GGTTACGATCATTCACTCAG+CGG 0.749429 7_1:-69864563 None:intergenic
GCCATCTATGAAGTTCCCTG+AGG 0.755654 7_1:-69862142 Msa1034400:intron
CTAGATATAAAATTTCAAGG+AGG 0.764317 7_1:-69857389 Msa1034400:three_prime_UTR
GATGAACAAAGAAACCAGTG+AGG 0.792099 7_1:-69859025 Msa1034400:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTGCATATTTAAAATAAA+TGG - chr7_1:69858044-69858063 Msa1034400:intron 10.0%
!!! TTAAAGAATTTTAAAAAAGA+AGG - chr7_1:69860320-69860339 Msa1034400:CDS 10.0%
!!! TAAAGAATTTTAAAAAAGAA+GGG - chr7_1:69860321-69860340 Msa1034400:CDS 10.0%
!!! ATTTTGTAGAAAAAAGATTT+TGG - chr7_1:69857563-69857582 Msa1034400:three_prime_UTR 15.0%
!!! TTTTGTAGAAAAAAGATTTT+GGG - chr7_1:69857564-69857583 Msa1034400:three_prime_UTR 15.0%
!! AAACATGATTTATAGATTAA+GGG + chr7_1:69860068-69860087 None:intergenic 15.0%
!! TAAACATGATTTATAGATTA+AGG + chr7_1:69860069-69860088 None:intergenic 15.0%
!!! GCAATCTAAATATTTTAAAA+AGG - chr7_1:69860187-69860206 Msa1034400:intron 15.0%
!! ATAAATGCAGTAAAAAAAAA+TGG + chr7_1:69860551-69860570 None:intergenic 15.0%
!!! TTTTTTACTTCTAGATTTAA+AGG - chr7_1:69861133-69861152 Msa1034400:intron 15.0%
!!! TTTTTACTTCTAGATTTAAA+GGG - chr7_1:69861134-69861153 Msa1034400:intron 15.0%
!! TACATTAGTATTAAGAATAA+AGG + chr7_1:69864191-69864210 None:intergenic 15.0%
!! ATACTAGATATAAAATTTCA+AGG - chr7_1:69864493-69864512 Msa1034400:five_prime_UTR 15.0%
!!! GAAAAGTTAAGATTTTTTGT+TGG + chr7_1:69857517-69857536 None:intergenic 20.0%
!! TATTGCAATTTGATTGTATA+TGG - chr7_1:69858007-69858026 Msa1034400:intron 20.0%
!! ACAATATTAACATCACATAA+AGG + chr7_1:69858139-69858158 None:intergenic 20.0%
!! TATGTGATGTTAATATTGTT+AGG - chr7_1:69858140-69858159 Msa1034400:intron 20.0%
!! ATAACAACAAGATATATCAA+AGG + chr7_1:69858542-69858561 None:intergenic 20.0%
!!! TGATATATCTTGTTGTTATT+AGG - chr7_1:69858543-69858562 Msa1034400:CDS 20.0%
!! ATTGTATTCTATCACTTAAA+TGG - chr7_1:69858661-69858680 Msa1034400:CDS 20.0%
!!! ACTAAAGGATGAAAATATTT+TGG - chr7_1:69859222-69859241 Msa1034400:intron 20.0%
!! TACTGAATAAATCATGAAAA+AGG + chr7_1:69859301-69859320 None:intergenic 20.0%
!! ATTCAGTAACTTCTAATTAT+TGG - chr7_1:69859313-69859332 Msa1034400:CDS 20.0%
!! TAACTTCTAATTATTGGAAA+AGG - chr7_1:69859319-69859338 Msa1034400:CDS 20.0%
!! TAGCAAGAATACAATTATTA+GGG + chr7_1:69859441-69859460 None:intergenic 20.0%
!! GTAAAGACTAAATAATGATT+AGG + chr7_1:69859668-69859687 None:intergenic 20.0%
!! AAGAGTTATAATATTGACAA+AGG + chr7_1:69859934-69859953 None:intergenic 20.0%
!! TGATTAATGAATACAACATT+TGG + chr7_1:69860031-69860050 None:intergenic 20.0%
!! TTTGAGTAAAAACATATGAA+AGG - chr7_1:69860112-69860131 Msa1034400:intron 20.0%
!! ATATGAAAGGATATACATAA+GGG - chr7_1:69860125-69860144 Msa1034400:intron 20.0%
!! GTAAAAAAAGAAAAAAATCG+AGG - chr7_1:69860571-69860590 Msa1034400:CDS 20.0%
!!! AAAGTAGAGATAGTTTTTAA+TGG - chr7_1:69860988-69861007 Msa1034400:CDS 20.0%
!! TAAAAAAACCTTTCAAATCT+TGG + chr7_1:69861120-69861139 None:intergenic 20.0%
!! TTGAAGAATGAATATGAAAA+AGG + chr7_1:69861975-69861994 None:intergenic 20.0%
!!! ATACTATTGTTCTAAAGATA+AGG - chr7_1:69862018-69862037 Msa1034400:intron 20.0%
!! AACATTAACATGATATCATA+TGG + chr7_1:69862694-69862713 None:intergenic 20.0%
!! TTTGATCTTGAAAAATGAAA+CGG - chr7_1:69863993-69864012 Msa1034400:CDS 20.0%
!!! CCTTTGTTTTTTTAGAAATA+GGG - chr7_1:69864427-69864446 Msa1034400:five_prime_UTR 20.0%
!!! CTTTGTTTTTTTAGAAATAG+GGG - chr7_1:69864428-69864447 Msa1034400:five_prime_UTR 20.0%
!!! TTTGTTTTTTTAGAAATAGG+GGG - chr7_1:69864429-69864448 Msa1034400:five_prime_UTR 20.0%
! TGGTTTGAATTCAAATTTGT+GGG + chr7_1:69857362-69857381 None:intergenic 25.0%
! ATGGTTTGAATTCAAATTTG+TGG + chr7_1:69857363-69857382 None:intergenic 25.0%
!!! ATGGTTTTGTAACGTTATTA+TGG + chr7_1:69857382-69857401 None:intergenic 25.0%
!!! AAAAAGGAACTTTTTGAAGT+GGG + chr7_1:69857473-69857492 None:intergenic 25.0%
!!! AAAAAAGGAACTTTTTGAAG+TGG + chr7_1:69857474-69857493 None:intergenic 25.0%
!! TTTTCAAAATACTGATATGC+AGG + chr7_1:69858222-69858241 None:intergenic 25.0%
! AGAAAAAAGTAGTGCTTTAT+TGG - chr7_1:69858391-69858410 Msa1034400:CDS 25.0%
! ATTGGTAAATTTAGAAAACC+AGG - chr7_1:69858409-69858428 Msa1034400:CDS 25.0%
! TTGGTAAATTTAGAAAACCA+GGG - chr7_1:69858410-69858429 Msa1034400:CDS 25.0%
! TGTTTGAACAAGTATATTGT+TGG - chr7_1:69858586-69858605 Msa1034400:CDS 25.0%
! TTGATTGATTGCAAAACTAA+AGG + chr7_1:69858744-69858763 None:intergenic 25.0%
! AGTAATGTTCAAAAACAAGA+AGG - chr7_1:69858858-69858877 Msa1034400:CDS 25.0%
!!! AATTTTAATCCTTTAGCTGA+TGG - chr7_1:69858954-69858973 Msa1034400:intron 25.0%
! GGTTTGAAAACATACAATTA+AGG + chr7_1:69859065-69859084 None:intergenic 25.0%
!! TATGTTTTCAAACCATAACA+TGG - chr7_1:69859071-69859090 Msa1034400:CDS 25.0%
!! ATGTTTTCAAACCATAACAT+GGG - chr7_1:69859072-69859091 Msa1034400:CDS 25.0%
! AATAAAAACTTCCCATGTTA+TGG + chr7_1:69859086-69859105 None:intergenic 25.0%
!! ATAACATGGGAAGTTTTTAT+TGG - chr7_1:69859085-69859104 Msa1034400:CDS 25.0%
!!! AAAAGCAGGAACTTTTTTAA+TGG + chr7_1:69859154-69859173 None:intergenic 25.0%
! ATGAAAAAAAGTCAAAAAGC+AGG + chr7_1:69859168-69859187 None:intergenic 25.0%
!! TTTAGGTTTGAAAACTTACA+AGG + chr7_1:69859194-69859213 None:intergenic 25.0%
! ACCTAAACTCAAATAACTAA+AGG - chr7_1:69859207-69859226 Msa1034400:intron 25.0%
!! TCCTTTAGTTATTTGAGTTT+AGG + chr7_1:69859211-69859230 None:intergenic 25.0%
!!! GTTAAAAAGCATTTGTACAT+AGG - chr7_1:69859377-69859396 Msa1034400:CDS 25.0%
! GTAGCAAGAATACAATTATT+AGG + chr7_1:69859442-69859461 None:intergenic 25.0%
!! ATTTCCATCGATATTTTCTT+TGG + chr7_1:69859534-69859553 None:intergenic 25.0%
! ACATTTGTTTACATGATTAC+AGG + chr7_1:69859603-69859622 None:intergenic 25.0%
! AAGACTAAATAATGATTAGG+TGG + chr7_1:69859665-69859684 None:intergenic 25.0%
! CAGTCAAAATCTGATTAAAT+AGG + chr7_1:69859707-69859726 None:intergenic 25.0%
!!! CTATTTAATCAGATTTTGAC+TGG - chr7_1:69859705-69859724 Msa1034400:CDS 25.0%
! ATTATGAATTAGCACCAAAA+AGG + chr7_1:69859794-69859813 None:intergenic 25.0%
!!! CATCCTTGGTTTTTATTTTT+TGG - chr7_1:69859898-69859917 Msa1034400:CDS 25.0%
! CATATGAAAGGATATACATA+AGG - chr7_1:69860124-69860143 Msa1034400:intron 25.0%
! ATACATAACATAAGACTTCT+TGG - chr7_1:69860281-69860300 Msa1034400:intron 25.0%
!! TTCTTTTAGATTTCGAAGAA+GGG + chr7_1:69860511-69860530 None:intergenic 25.0%
!! TTTCTTTTAGATTTCGAAGA+AGG + chr7_1:69860512-69860531 None:intergenic 25.0%
! TATACAGAAAAAAGAACTTC+AGG - chr7_1:69860703-69860722 Msa1034400:intron 25.0%
!!! CAGAGTTTTTTCAAAGATAT+AGG - chr7_1:69860911-69860930 Msa1034400:intron 25.0%
! GAAAACTGTTTCAGTTTAAT+CGG - chr7_1:69861355-69861374 Msa1034400:intron 25.0%
!! TTTCAGTTTAATCGGATTTT+TGG - chr7_1:69861363-69861382 Msa1034400:intron 25.0%
! AGTAAATTTCAACAAAGAGA+TGG + chr7_1:69861482-69861501 None:intergenic 25.0%
!!! AACGTTTGTATTTTTGCTTA+TGG - chr7_1:69861568-69861587 Msa1034400:CDS 25.0%
! GTATGAAATTTATGTCCAAA+TGG - chr7_1:69861887-69861906 Msa1034400:intron 25.0%
!! AAAGCTTTTCTTTGACATAA+TGG + chr7_1:69862647-69862666 None:intergenic 25.0%
! ATTATGTCAAAGAAAAGCTT+TGG - chr7_1:69862646-69862665 Msa1034400:intron 25.0%
!! TATCATGTTAATGTTTTCTC+TGG - chr7_1:69862699-69862718 Msa1034400:intron 25.0%
! AGTCTTAAATCTTAACTTCT+TGG - chr7_1:69862921-69862940 Msa1034400:intron 25.0%
! CCATAGCAAAAAAAAAAAAG+AGG + chr7_1:69862995-69863014 None:intergenic 25.0%
!!! CCTCTTTTTTTTTTTTGCTA+TGG - chr7_1:69862992-69863011 Msa1034400:intron 25.0%
!!! TTTTTTTTGCTATGGATACT+AGG - chr7_1:69863000-69863019 Msa1034400:intron 25.0%
!!! TCTTTAGTTCTATTGAACAT+TGG + chr7_1:69863070-69863089 None:intergenic 25.0%
!! ATAAGAAGTATGCTTTCTTT+AGG - chr7_1:69863656-69863675 Msa1034400:CDS 25.0%
! TAAAAAGGTTTAAAAACACC+AGG + chr7_1:69863690-69863709 None:intergenic 25.0%
!! ACCTTTTTACAAATGTTTTC+AGG - chr7_1:69863701-69863720 Msa1034400:CDS 25.0%
! ACCTGAAAACATTTGTAAAA+AGG + chr7_1:69863705-69863724 None:intergenic 25.0%
! ATTCTGTATGATTAACTTAC+AGG + chr7_1:69863944-69863963 None:intergenic 25.0%
! TATTATTATAGTCCTGATCA+AGG - chr7_1:69864075-69864094 Msa1034400:intron 25.0%
!! ACTAACTCTATGATTGTTTT+TGG - chr7_1:69864210-69864229 Msa1034400:CDS 25.0%
!!! GCCTTTGTTTTTTTAGAAAT+AGG - chr7_1:69864426-69864445 Msa1034400:five_prime_UTR 25.0%
!!! CCCTATTTCTAAAAAAACAA+AGG + chr7_1:69864430-69864449 None:intergenic 25.0%
! CTAGATATAAAATTTCAAGG+AGG - chr7_1:69864496-69864515 Msa1034400:five_prime_UTR 25.0%
GAAGAATGAGAAGAGAAAAA+AGG + chr7_1:69857489-69857508 None:intergenic 30.0%
!! TTGATTGTTGATGATCATGA+TGG - chr7_1:69857623-69857642 Msa1034400:CDS 30.0%
ATGGAGAATTGTTCAAGAAA+TGG - chr7_1:69857642-69857661 Msa1034400:intron 30.0%
TGGAGAATTGTTCAAGAAAT+GGG - chr7_1:69857643-69857662 Msa1034400:intron 30.0%
CAATCAAATTGCAATACCTT+AGG + chr7_1:69858003-69858022 None:intergenic 30.0%
AAATACTGATATGCAGGTAA+AGG + chr7_1:69858216-69858235 None:intergenic 30.0%
AAAACCAGGGTTTAAATGAT+GGG - chr7_1:69858423-69858442 Msa1034400:CDS 30.0%
TTCAAATGTGACCTAAATTG+AGG - chr7_1:69858460-69858479 Msa1034400:CDS 30.0%
!!! TCTTGTTGTTATTAGGCTTT+TGG - chr7_1:69858550-69858569 Msa1034400:CDS 30.0%
!!! TGTTATTAGGCTTTTGGTTT+TGG - chr7_1:69858556-69858575 Msa1034400:CDS 30.0%
!! TTGTTGGTCATTTGTTTTTC+AGG - chr7_1:69858602-69858621 Msa1034400:CDS 30.0%
TTAAAGTGCAAAATGTCAAC+TGG + chr7_1:69859016-69859035 None:intergenic 30.0%
! AGTTGACATTTTGCACTTTA+AGG - chr7_1:69859015-69859034 Msa1034400:CDS 30.0%
ATACAATTATTAGGGACACA+AGG + chr7_1:69859433-69859452 None:intergenic 30.0%
TTTCTTTGGCATAAAGCATA+CGG + chr7_1:69859520-69859539 None:intergenic 30.0%
TATGCCAAAGAAAATATCGA+TGG - chr7_1:69859527-69859546 Msa1034400:intron 30.0%
AGGTACAAATTATGATTACC+AGG + chr7_1:69859583-69859602 None:intergenic 30.0%
! CATTATTTAGTCTTTACTGC+AGG - chr7_1:69859671-69859690 Msa1034400:CDS 30.0%
! TTTTCCGAAGTTATCCTTTT+TGG - chr7_1:69859777-69859796 Msa1034400:CDS 30.0%
TAATTGAGAACAATCATCCT+TGG - chr7_1:69859884-69859903 Msa1034400:CDS 30.0%
CAGCCAAAAAATAAAAACCA+AGG + chr7_1:69859904-69859923 None:intergenic 30.0%
TCATGTTTATCAAACCAATC+TGG - chr7_1:69860080-69860099 Msa1034400:CDS 30.0%
TCAAAATGTTCAAACCAGAT+TGG + chr7_1:69860097-69860116 None:intergenic 30.0%
TCCATTATGCTCATTCTATT+AGG - chr7_1:69860160-69860179 Msa1034400:intron 30.0%
TCCTAATAGAATGAGCATAA+TGG + chr7_1:69860164-69860183 None:intergenic 30.0%
GGAAAAACATATTGTACCTT+GGG + chr7_1:69860413-69860432 None:intergenic 30.0%
AGGAAAAACATATTGTACCT+TGG + chr7_1:69860414-69860433 None:intergenic 30.0%
TTCGAAGAAGGGAAATAATT+CGG + chr7_1:69860500-69860519 None:intergenic 30.0%
CAAGAAGCTTTCAAAGTTAA+TGG + chr7_1:69860948-69860967 None:intergenic 30.0%
!! TTGTGTTATTTCATGAATCC+AGG - chr7_1:69861013-69861032 Msa1034400:CDS 30.0%
! CATTTTGCATTTGAAAAGGT+AGG + chr7_1:69861206-69861225 None:intergenic 30.0%
AATGAAATCAACTACAGTCT+TGG + chr7_1:69861280-69861299 None:intergenic 30.0%
! AAGACTGTAGTTGATTTCAT+TGG - chr7_1:69861279-69861298 Msa1034400:intron 30.0%
! AGACTGTAGTTGATTTCATT+GGG - chr7_1:69861280-69861299 Msa1034400:intron 30.0%
!! CCATCTTTTAGTGTTTTTGA+TGG + chr7_1:69861333-69861352 None:intergenic 30.0%
CCATCAAAAACACTAAAAGA+TGG - chr7_1:69861330-69861349 Msa1034400:intron 30.0%
! TACTATTTTGTACTCAGATG+AGG - chr7_1:69861498-69861517 Msa1034400:CDS 30.0%
ACCATTAATTAGATCAGTGA+TGG - chr7_1:69861537-69861556 Msa1034400:CDS 30.0%
TCCATCACTGATCTAATTAA+TGG + chr7_1:69861541-69861560 None:intergenic 30.0%
! TTAATTAGATCAGTGATGGA+TGG - chr7_1:69861541-69861560 Msa1034400:CDS 30.0%
! ATTTTTGCTTATGGTCAAAC+TGG - chr7_1:69861577-69861596 Msa1034400:intron 30.0%
AATTTAGATGGTTTGAGCAT+TGG + chr7_1:69861745-69861764 None:intergenic 30.0%
!!! TTTTTTTTCATGTTGCAGAG+TGG - chr7_1:69861771-69861790 Msa1034400:intron 30.0%
! ATAATTGATTCCCATATCCT+TGG + chr7_1:69861814-69861833 None:intergenic 30.0%
GGATATGGGAATCAATTATT+TGG - chr7_1:69861815-69861834 Msa1034400:intron 30.0%
TGTTTCAAATGTCTAGTGAA+AGG - chr7_1:69861850-69861869 Msa1034400:intron 30.0%
!! CTATTGTTCTAAAGATAAGG+CGG - chr7_1:69862021-69862040 Msa1034400:intron 30.0%
GGAAATAAACTACTTGCAAA+TGG + chr7_1:69862081-69862100 None:intergenic 30.0%
ATCATATGGTGAAAAAACCA+AGG + chr7_1:69862680-69862699 None:intergenic 30.0%
! TCTGGAAATTTTTGCATTGT+AGG - chr7_1:69862717-69862736 Msa1034400:intron 30.0%
! TTTTTATCATCAGCTTTCAC+AGG + chr7_1:69863175-69863194 None:intergenic 30.0%
GTGAAAGCTGATGATAAAAA+TGG - chr7_1:69863175-69863194 Msa1034400:CDS 30.0%
!!! AAAGTTTTGTTTACACATGC+CGG + chr7_1:69863274-69863293 None:intergenic 30.0%
TTATAGGCACAAATGGAAAA+GGG - chr7_1:69863581-69863600 Msa1034400:intron 30.0%
ACAATTGGGAAACTGATTAA+TGG - chr7_1:69863628-69863647 Msa1034400:CDS 30.0%
! AAGAAAGCATACTTCTTATC+AGG + chr7_1:69863655-69863674 None:intergenic 30.0%
ATGCAGAAACCAACAAATTA+TGG - chr7_1:69863753-69863772 Msa1034400:intron 30.0%
! TCACTTCAACCATAATTTGT+TGG + chr7_1:69863765-69863784 None:intergenic 30.0%
! GTTAAAGATTGTCTCCTTTT+TGG + chr7_1:69863856-69863875 None:intergenic 30.0%
AAAAGGAGACAATCTTTAAC+AGG - chr7_1:69863856-69863875 Msa1034400:intron 30.0%
TCTCAGTGAGAAATGAAAAA+TGG + chr7_1:69863969-69863988 None:intergenic 30.0%
AACAAAAACTCCAACCAAAT+TGG + chr7_1:69864389-69864408 None:intergenic 30.0%
!!! TTTTTTTAGAAATAGGGGGA+GGG - chr7_1:69864433-69864452 Msa1034400:five_prime_UTR 30.0%
!! TCTCTACCTTACTTTTCAAA+AGG - chr7_1:69864520-69864539 Msa1034400:five_prime_UTR 30.0%
!! CTCTACCTTACTTTTCAAAA+GGG - chr7_1:69864521-69864540 Msa1034400:five_prime_UTR 30.0%
!! TCTACCTTACTTTTCAAAAG+GGG - chr7_1:69864522-69864541 Msa1034400:five_prime_UTR 30.0%
!! TTTAGGGGAGTATTATGCTT+TGG + chr7_1:69857426-69857445 None:intergenic 35.0%
! CTTGTTTCTTGCTTGAGAAA+TGG - chr7_1:69857931-69857950 Msa1034400:intron 35.0%
ACCAGGATGAATCTTGTTAA+TGG + chr7_1:69857974-69857993 None:intergenic 35.0%
ATTACAACAATCCCTTGCTT+GGG - chr7_1:69858182-69858201 Msa1034400:intron 35.0%
AAGATCAGAAGCTTCAAAAG+CGG + chr7_1:69858286-69858305 None:intergenic 35.0%
TTGAAGCTTCTGATCTTGAA+AGG - chr7_1:69858289-69858308 Msa1034400:CDS 35.0%
TGAAGCTTCTGATCTTGAAA+GGG - chr7_1:69858290-69858309 Msa1034400:CDS 35.0%
GAAAACCAGGGTTTAAATGA+TGG - chr7_1:69858422-69858441 Msa1034400:CDS 35.0%
CATTATTGATATTGCGTCCT+AGG - chr7_1:69858503-69858522 Msa1034400:CDS 35.0%
! TTTCAGGAAAGTGTAGAGAA+TGG - chr7_1:69858618-69858637 Msa1034400:CDS 35.0%
TTTGGATTTGTCTGCAACAT+CGG - chr7_1:69858815-69858834 Msa1034400:CDS 35.0%
! TTTTGAACATTACTCTCAGC+AGG + chr7_1:69858852-69858871 None:intergenic 35.0%
CTCACTAGTATCTGATTCAT+TGG - chr7_1:69858899-69858918 Msa1034400:intron 35.0%
GGAATATTAGTTCAGAATGC+TGG - chr7_1:69859036-69859055 Msa1034400:CDS 35.0%
AAAATCTCCAACTAACCTCA+GGG + chr7_1:69859761-69859780 None:intergenic 35.0%
AGCACCAAAAAGGATAACTT+CGG + chr7_1:69859784-69859803 None:intergenic 35.0%
! ATAATTTGCAGCATGAAGAC+TGG + chr7_1:69859832-69859851 None:intergenic 35.0%
TTCATGCTGCAAATTATGCT+AGG - chr7_1:69859835-69859854 Msa1034400:intron 35.0%
! CTCTTGATGTATGTTGTTTG+TGG - chr7_1:69859949-69859968 Msa1034400:CDS 35.0%
AAATATTGTGAACCCATGTG+AGG - chr7_1:69860237-69860256 Msa1034400:intron 35.0%
ACACTGTATGAAATGCACAT+TGG + chr7_1:69860636-69860655 None:intergenic 35.0%
GTATATCTATGAGATGCTTG+TGG + chr7_1:69860688-69860707 None:intergenic 35.0%
CAGAAAAAAGAACTTCAGGT+AGG - chr7_1:69860707-69860726 Msa1034400:intron 35.0%
!! GCATTTGTGCAGCTTTAAAT+AGG - chr7_1:69860729-69860748 Msa1034400:intron 35.0%
AAACATTGTCTCAAAACTGC+AGG + chr7_1:69860810-69860829 None:intergenic 35.0%
! ATCTCATTAACTTGACAACC+TGG + chr7_1:69861034-69861053 None:intergenic 35.0%
!! TTTTTGATAGCCAAGAGCTT+TGG + chr7_1:69861062-69861081 None:intergenic 35.0%
GAACAGAAAGCTATACAACA+TGG - chr7_1:69861093-69861112 Msa1034400:intron 35.0%
AACATGGTCCAAGATTTGAA+AGG - chr7_1:69861109-69861128 Msa1034400:intron 35.0%
! CCTGCATTTTGCATTTGAAA+AGG + chr7_1:69861210-69861229 None:intergenic 35.0%
! CCTTTTCAAATGCAAAATGC+AGG - chr7_1:69861207-69861226 Msa1034400:CDS 35.0%
CAGAATCAGACCTACATTTA+GGG - chr7_1:69861248-69861267 Msa1034400:intron 35.0%
! GACTGTAGTTGATTTCATTG+GGG - chr7_1:69861281-69861300 Msa1034400:intron 35.0%
!!! TAGCTTTTAGAACTCTACCT+TGG + chr7_1:69861401-69861420 None:intergenic 35.0%
AGAGATGGATAGAGAAAGAA+GGG + chr7_1:69861467-69861486 None:intergenic 35.0%
AAGAGATGGATAGAGAAAGA+AGG + chr7_1:69861468-69861487 None:intergenic 35.0%
TGTACTCAGATGAGGTTTAT+AGG - chr7_1:69861506-69861525 Msa1034400:CDS 35.0%
GTACTCAGATGAGGTTTATA+GGG - chr7_1:69861507-69861526 Msa1034400:CDS 35.0%
TCAAATGTCTAGTGAAAGGA+AGG - chr7_1:69861854-69861873 Msa1034400:intron 35.0%
CATTGTAAATCTCGACCATT+TGG + chr7_1:69861905-69861924 None:intergenic 35.0%
GTTCTACTGCAATCAACAAT+AGG - chr7_1:69862237-69862256 Msa1034400:intron 35.0%
TTTGTCTACTCTTTCACTTC+CGG + chr7_1:69862459-69862478 None:intergenic 35.0%
TAACAAGTCTCTTTCCTGTT+TGG - chr7_1:69862520-69862539 Msa1034400:intron 35.0%
AACAAGTCTCTTTCCTGTTT+GGG - chr7_1:69862521-69862540 Msa1034400:intron 35.0%
AGAATTCTCACATTCCTTAC+AGG - chr7_1:69862570-69862589 Msa1034400:intron 35.0%
! GGAAATTTTTGCATTGTAGG+TGG - chr7_1:69862720-69862739 Msa1034400:intron 35.0%
!! TTTAAGTTGCATAACCTCAC+TGG + chr7_1:69862877-69862896 None:intergenic 35.0%
ACTTCTTGGAGACTAAGAAT+CGG - chr7_1:69862935-69862954 Msa1034400:intron 35.0%
TGAGAACCTTAAGATTGCAT+TGG - chr7_1:69863024-69863043 Msa1034400:intron 35.0%
TGTTTGCCAATGCAATCTTA+AGG + chr7_1:69863033-69863052 None:intergenic 35.0%
! TAAGATTGCATTGGCAAACA+AGG - chr7_1:69863033-69863052 Msa1034400:CDS 35.0%
TCTCAATACTAAGTCTTCGT+GGG + chr7_1:69863126-69863145 None:intergenic 35.0%
TTCTCAATACTAAGTCTTCG+TGG + chr7_1:69863127-69863146 None:intergenic 35.0%
! CTTAGTATTGAGAATTGCAG+CGG - chr7_1:69863133-69863152 Msa1034400:CDS 35.0%
CAAGCTTAATCTTCTTGAAC+GGG + chr7_1:69863224-69863243 None:intergenic 35.0%
CCAAGCTTAATCTTCTTGAA+CGG + chr7_1:69863225-69863244 None:intergenic 35.0%
TCAAGAAGATTAAGCTTGGA+AGG - chr7_1:69863226-69863245 Msa1034400:CDS 35.0%
! AAGAACTGTCAAAAAAGCAC+CGG - chr7_1:69863252-69863271 Msa1034400:CDS 35.0%
CGATCTTTCTGTTGAGATAT+TGG + chr7_1:69863307-69863326 None:intergenic 35.0%
CTAAATGGCCAATTAAGCAA+TGG - chr7_1:69863358-69863377 Msa1034400:intron 35.0%
TGGAATTGCCATTGCTTAAT+TGG + chr7_1:69863369-69863388 None:intergenic 35.0%
AATTAAGCAATGGCAATTCC+AGG - chr7_1:69863368-69863387 Msa1034400:intron 35.0%
TTATCTAGCATTTGTGCTTC+AGG + chr7_1:69863505-69863524 None:intergenic 35.0%
TCCATAACAGCTAAGGTTAT+AGG - chr7_1:69863565-69863584 Msa1034400:intron 35.0%
GTTATAGGCACAAATGGAAA+AGG - chr7_1:69863580-69863599 Msa1034400:intron 35.0%
TCTTAGGGATCTTCTAAACT+GGG + chr7_1:69863608-69863627 None:intergenic 35.0%
TTCTTAGGGATCTTCTAAAC+TGG + chr7_1:69863609-69863628 None:intergenic 35.0%
AGAAGATCCCTAAGAACAAT+TGG - chr7_1:69863613-69863632 Msa1034400:CDS 35.0%
GAAGATCCCTAAGAACAATT+GGG - chr7_1:69863614-69863633 Msa1034400:CDS 35.0%
CAGTTTCCCAATTGTTCTTA+GGG + chr7_1:69863623-69863642 None:intergenic 35.0%
TCAGTTTCCCAATTGTTCTT+AGG + chr7_1:69863624-69863643 None:intergenic 35.0%
TTTCTTTAGGCTTCTAAACC+TGG - chr7_1:69863669-69863688 Msa1034400:CDS 35.0%
TCTTTAACAGGAATACCATC+CGG - chr7_1:69863868-69863887 Msa1034400:intron 35.0%
TGATTAACTTACAGGCTACT+GGG + chr7_1:69863936-69863955 None:intergenic 35.0%
ATGATTAACTTACAGGCTAC+TGG + chr7_1:69863937-69863956 None:intergenic 35.0%
TCCTCAAAAGTCTCAAACAT+TGG - chr7_1:69864027-69864046 Msa1034400:CDS 35.0%
!! ACCAATGTTTGAGACTTTTG+AGG + chr7_1:69864031-69864050 None:intergenic 35.0%
CTTCGAAAGTTATCTGACAT+AGG + chr7_1:69864054-69864073 None:intergenic 35.0%
!!! GTTTTTTTAGAAATAGGGGG+AGG - chr7_1:69864432-69864451 Msa1034400:five_prime_UTR 35.0%
!! CTACCTTACTTTTCAAAAGG+GGG - chr7_1:69864523-69864542 Msa1034400:five_prime_UTR 35.0%
!! AATCCCCCTTTTGAAAAGTA+AGG + chr7_1:69864529-69864548 None:intergenic 35.0%
AATTTGTGGGACACGTTCTT+GGG + chr7_1:69857349-69857368 None:intergenic 40.0%
AAATTTGTGGGACACGTTCT+TGG + chr7_1:69857350-69857369 None:intergenic 40.0%
ACGTTACAAAACCATACCTC+AGG - chr7_1:69857387-69857406 Msa1034400:three_prime_UTR 40.0%
! GGAGTATTATGCTTTGGTTC+GGG + chr7_1:69857420-69857439 None:intergenic 40.0%
!! GGGAGTATTATGCTTTGGTT+CGG + chr7_1:69857421-69857440 None:intergenic 40.0%
!! TTGTGAGAAGGGTTGGTTTA+GGG + chr7_1:69857442-69857461 None:intergenic 40.0%
!!! AGGAACTTTTTGAAGTGGGT+GGG + chr7_1:69857469-69857488 None:intergenic 40.0%
!!! AAGGAACTTTTTGAAGTGGG+TGG + chr7_1:69857470-69857489 None:intergenic 40.0%
TCAAGAAAAGCTGAAGAAGC+AGG - chr7_1:69857687-69857706 Msa1034400:intron 40.0%
!! CACTTGGTTTTCAAGCCATT+GGG + chr7_1:69857872-69857891 None:intergenic 40.0%
CAATGGCTTGAAAACCAAGT+GGG - chr7_1:69857871-69857890 Msa1034400:intron 40.0%
! GGTTGATGTGATATTCCAAG+AGG + chr7_1:69857898-69857917 None:intergenic 40.0%
GAAACAAGTTCTCTCTCAGT+AGG + chr7_1:69857919-69857938 None:intergenic 40.0%
GCCATTAACAAGATTCATCC+TGG - chr7_1:69857970-69857989 Msa1034400:intron 40.0%
CAAGCAAGGGATTGTTGTAA+TGG + chr7_1:69858183-69858202 None:intergenic 40.0%
CATTACAACAATCCCTTGCT+TGG - chr7_1:69858181-69858200 Msa1034400:intron 40.0%
!!! TGTGCGCAATTTTTTGAACG+CGG - chr7_1:69858242-69858261 Msa1034400:intron 40.0%
AGATCAGAAGCTTCAAAAGC+GGG + chr7_1:69858285-69858304 None:intergenic 40.0%
AAGCAGATGAGCAATCAAAG+TGG - chr7_1:69858696-69858715 Msa1034400:CDS 40.0%
! TTTTGGACTTGTGTGCATCA+TGG - chr7_1:69859239-69859258 Msa1034400:intron 40.0%
TTTGGACTTGTGTGCATCAT+GGG - chr7_1:69859240-69859259 Msa1034400:intron 40.0%
ATTCTTGCTACTACCTTCAC+TGG - chr7_1:69859451-69859470 Msa1034400:CDS 40.0%
! CTTTTTGCTTCTCTTCGCAA+TGG - chr7_1:69859554-69859573 Msa1034400:intron 40.0%
!!! GATTTTGACTGGTTGTTGTG+TGG - chr7_1:69859716-69859735 Msa1034400:CDS 40.0%
GAAAATCTCCAACTAACCTC+AGG + chr7_1:69859762-69859781 None:intergenic 40.0%
ATTAACTCTGACCACAGCAT+TGG + chr7_1:69859993-69860012 None:intergenic 40.0%
AAAGCAAGCAATCCTCACAT+GGG + chr7_1:69860252-69860271 None:intergenic 40.0%
AAAAGCAAGCAATCCTCACA+TGG + chr7_1:69860253-69860272 None:intergenic 40.0%
GTAGGTTTGGAAGTGAAATG+AGG + chr7_1:69860359-69860378 None:intergenic 40.0%
AGTGTCTGATTCTGTAGGTT+TGG + chr7_1:69860372-69860391 None:intergenic 40.0%
!! GAGAAAGTGTCTGATTCTGT+AGG + chr7_1:69860377-69860396 None:intergenic 40.0%
TGTAAATCACGTGTTCACTC+AGG - chr7_1:69860829-69860848 Msa1034400:CDS 40.0%
CGAAGATTACTTGGAGATCA+AGG + chr7_1:69861179-69861198 None:intergenic 40.0%
GTAGGTACACGAAGATTACT+TGG + chr7_1:69861188-69861207 None:intergenic 40.0%
GCAGAATCAGACCTACATTT+AGG - chr7_1:69861247-69861266 Msa1034400:intron 40.0%
TTGGATTCAGCCCTAAATGT+AGG + chr7_1:69861261-69861280 None:intergenic 40.0%
! GTTGATTTCATTGGGGAAGA+CGG - chr7_1:69861288-69861307 Msa1034400:intron 40.0%
AGAAAGAAGGGGGATAAAGT+CGG + chr7_1:69861455-69861474 None:intergenic 40.0%
AGATGGATAGAGAAAGAAGG+GGG + chr7_1:69861465-69861484 None:intergenic 40.0%
GAGATGGATAGAGAAAGAAG+GGG + chr7_1:69861466-69861485 None:intergenic 40.0%
CTTATGGTCAAACTGGATCT+GGG - chr7_1:69861584-69861603 Msa1034400:intron 40.0%
!! ATGGTTTGAGCATTGGTCAA+AGG + chr7_1:69861738-69861757 None:intergenic 40.0%
AGTAAGAGATCTACTTGCAG+AGG - chr7_1:69861929-69861948 Msa1034400:intron 40.0%
CTCTAATGTGAGGTCAGTTA+AGG + chr7_1:69862102-69862121 None:intergenic 40.0%
GTTATGACCCTCATGAAACT+TGG - chr7_1:69862194-69862213 Msa1034400:CDS 40.0%
AACCTCTCCAAGTTTCATGA+GGG + chr7_1:69862204-69862223 None:intergenic 40.0%
TAACCTCTCCAAGTTTCATG+AGG + chr7_1:69862205-69862224 None:intergenic 40.0%
!! CAGGTGAGTTTTCACTTTTC+AGG - chr7_1:69862274-69862293 Msa1034400:intron 40.0%
GTAAGTACACTGAGACACAT+TGG + chr7_1:69862368-69862387 None:intergenic 40.0%
GTACTTACTGTGCATGTTAG+TGG - chr7_1:69862380-69862399 Msa1034400:CDS 40.0%
GTTAGTGGCAAAGATACATC+CGG - chr7_1:69862395-69862414 Msa1034400:CDS 40.0%
TTAGTGGCAAAGATACATCC+GGG - chr7_1:69862396-69862415 Msa1034400:CDS 40.0%
CTTCATTTAGTAGACCTTGC+CGG - chr7_1:69862437-69862456 Msa1034400:intron 40.0%
! GTAGACAAATCTGAAGTCAC+AGG - chr7_1:69862470-69862489 Msa1034400:intron 40.0%
AGTCACAGGAGATAGACTAA+AGG - chr7_1:69862484-69862503 Msa1034400:intron 40.0%
! CAAACTCACACTTCTTTTGC+AGG - chr7_1:69862598-69862617 Msa1034400:intron 40.0%
TTCACCAAAGGAATCTGCTT+CGG + chr7_1:69862781-69862800 None:intergenic 40.0%
AGTACTCACTGTTTCACCAA+AGG + chr7_1:69862793-69862812 None:intergenic 40.0%
!! TACTCTGAAGTTTGCTCAGA+GGG - chr7_1:69862809-69862828 Msa1034400:intron 40.0%
! ACTGGTTTCTTTGTTCATCC+GGG + chr7_1:69862859-69862878 None:intergenic 40.0%
!! CACTGGTTTCTTTGTTCATC+CGG + chr7_1:69862860-69862879 None:intergenic 40.0%
GATGAACAAAGAAACCAGTG+AGG - chr7_1:69862860-69862879 Msa1034400:intron 40.0%
GGTTATGCAACTTAAAGCAC+AGG - chr7_1:69862881-69862900 Msa1034400:intron 40.0%
ACTCGTTAACCTGGTATCAT+AGG - chr7_1:69862958-69862977 Msa1034400:intron 40.0%
CTCGTTAACCTGGTATCATA+GGG - chr7_1:69862959-69862978 Msa1034400:intron 40.0%
GTTAAACACCCTATGATACC+AGG + chr7_1:69862970-69862989 None:intergenic 40.0%
ATCAGCTTTCACAGGTTTGT+TGG + chr7_1:69863167-69863186 None:intergenic 40.0%
!! CTTGAACGGGCTATATAAGA+AGG + chr7_1:69863211-69863230 None:intergenic 40.0%
CCGTTCAAGAAGATTAAGCT+TGG - chr7_1:69863222-69863241 Msa1034400:CDS 40.0%
!!! GGTGCTTTTTTGACAGTTCT+TGG + chr7_1:69863253-69863272 None:intergenic 40.0%
!! TTTAGCTTTGACACTGCTTC+TGG + chr7_1:69863343-69863362 None:intergenic 40.0%
GAAGCAGTGTCAAAGCTAAA+TGG - chr7_1:69863343-69863362 Msa1034400:intron 40.0%
TGATACATGTTCGTAGGACT+TGG + chr7_1:69863418-69863437 None:intergenic 40.0%
CTCTTCTGATACATGTTCGT+AGG + chr7_1:69863424-69863443 None:intergenic 40.0%
CTACGAACATGTATCAGAAG+AGG - chr7_1:69863422-69863441 Msa1034400:intron 40.0%
GTAGATCATGTGGGTGAATT+TGG + chr7_1:69863474-69863493 None:intergenic 40.0%
! GTGTTTCAGGTAGATCATGT+GGG + chr7_1:69863483-69863502 None:intergenic 40.0%
ATTTGTGCTTCAGGTGTTTC+AGG + chr7_1:69863496-69863515 None:intergenic 40.0%
GCCTATAACCTTAGCTGTTA+TGG + chr7_1:69863569-69863588 None:intergenic 40.0%
GCTAAGGTTATAGGCACAAA+TGG - chr7_1:69863574-69863593 Msa1034400:intron 40.0%
CTTTAACAGGAATACCATCC+GGG - chr7_1:69863869-69863888 Msa1034400:intron 40.0%
CGTCAATTTAGTCCTTGATC+AGG + chr7_1:69864090-69864109 None:intergenic 40.0%
CAGAAAGCAAGACTTCGAAA+CGG - chr7_1:69864289-69864308 Msa1034400:five_prime_UTR 40.0%
TTACTTGAAGCACACCAACA+AGG - chr7_1:69864334-69864353 Msa1034400:five_prime_UTR 40.0%
! GCTAGAACTGACTCTAGTTT+AGG - chr7_1:69864356-69864375 Msa1034400:five_prime_UTR 40.0%
! GTTTAGGACAAGCTCCAATT+TGG - chr7_1:69864372-69864391 Msa1034400:five_prime_UTR 40.0%
!! TGTGAGAAGGGTTGGTTTAG+GGG + chr7_1:69857441-69857460 None:intergenic 45.0%
!! GTTGTGAGAAGGGTTGGTTT+AGG + chr7_1:69857443-69857462 None:intergenic 45.0%
GACGTTATGAAGCAACCCAA+TGG - chr7_1:69857854-69857873 Msa1034400:intron 45.0%
!! CCACTTGGTTTTCAAGCCAT+TGG + chr7_1:69857873-69857892 None:intergenic 45.0%
CCAATGGCTTGAAAACCAAG+TGG - chr7_1:69857870-69857889 Msa1034400:intron 45.0%
ATATTCCAAGAGGACCCACT+TGG + chr7_1:69857888-69857907 None:intergenic 45.0%
! AATACCTTAGGTACTGCACC+AGG + chr7_1:69857991-69858010 None:intergenic 45.0%
ACAGCCCATCATTTAAACCC+TGG + chr7_1:69858430-69858449 None:intergenic 45.0%
CCACAGCTCAACCTCAATTT+AGG + chr7_1:69858474-69858493 None:intergenic 45.0%
CCTAAATTGAGGTTGAGCTG+TGG - chr7_1:69858471-69858490 Msa1034400:CDS 45.0%
TGATATTGCGTCCTAGGTTG+TGG - chr7_1:69858509-69858528 Msa1034400:CDS 45.0%
AAGGTTCATGACCACAACCT+AGG + chr7_1:69858523-69858542 None:intergenic 45.0%
! AGTGTAGAGAATGGTTCTGC+AGG - chr7_1:69858627-69858646 Msa1034400:CDS 45.0%
! AGGAGATTTTGAGCGTTTGC+TGG + chr7_1:69858724-69858743 None:intergenic 45.0%
ATCAGAGGGTAATGCAGTAG+TGG + chr7_1:69858784-69858803 None:intergenic 45.0%
CATTACCCTCTGATGCATGT+AGG - chr7_1:69858790-69858809 Msa1034400:CDS 45.0%
AAACGCCTACATGCATCAGA+GGG + chr7_1:69858798-69858817 None:intergenic 45.0%
TGAACATTACTCTCAGCAGG+AGG + chr7_1:69858849-69858868 None:intergenic 45.0%
CATACGGTCAACGAGCATAT+TGG + chr7_1:69859504-69859523 None:intergenic 45.0%
TTCTCTTCGCAATGGAAACC+TGG - chr7_1:69859562-69859581 Msa1034400:intron 45.0%
ACCTCAGGGAACTTCATAGA+TGG + chr7_1:69859747-69859766 None:intergenic 45.0%
TGAAGTTCCCTGAGGTTAGT+TGG - chr7_1:69859751-69859770 Msa1034400:CDS 45.0%
GGTTTGGAAGTGAAATGAGG+TGG + chr7_1:69860356-69860375 None:intergenic 45.0%
! ATACAGTGTAGAGCTTGCTC+TGG - chr7_1:69860647-69860666 Msa1034400:CDS 45.0%
GAGATGTCAACCAAAGCTCT+TGG - chr7_1:69861049-69861068 Msa1034400:intron 45.0%
GCTTATGGTCAAACTGGATC+TGG - chr7_1:69861583-69861602 Msa1034400:intron 45.0%
ATCTGGGAAGACTCACACAA+TGG - chr7_1:69861600-69861619 Msa1034400:intron 45.0%
AGGAGGAACATCCAAGGATA+TGG - chr7_1:69861800-69861819 Msa1034400:intron 45.0%
GGAGGAACATCCAAGGATAT+GGG - chr7_1:69861801-69861820 Msa1034400:intron 45.0%
CTGACCTCACATTAGAGATC+CGG - chr7_1:69862105-69862124 Msa1034400:intron 45.0%
TTGCAGTAGAACTGACAGCA+CGG + chr7_1:69862229-69862248 None:intergenic 45.0%
ATAGGAGTAGTCGTTCACAC+AGG - chr7_1:69862255-69862274 Msa1034400:intron 45.0%
CGGCAAGGTCTACTAAATGA+AGG + chr7_1:69862439-69862458 None:intergenic 45.0%
CTGTTTGGGAGATGTGATCA+CGG - chr7_1:69862535-69862554 Msa1034400:intron 45.0%
!! GTGAGTTTGCTGTTCCTGTA+AGG + chr7_1:69862587-69862606 None:intergenic 45.0%
! CTTCTTTTGCAGGACTCCTT+AGG - chr7_1:69862608-69862627 Msa1034400:intron 45.0%
TGGACACAAGTGTGTACCTA+AGG + chr7_1:69862627-69862646 None:intergenic 45.0%
!! AAGCTTTGGAGACTCTACCT+TGG - chr7_1:69862660-69862679 Msa1034400:intron 45.0%
TCACCAAAGGAATCTGCTTC+GGG + chr7_1:69862780-69862799 None:intergenic 45.0%
!! GTACTCTGAAGTTTGCTCAG+AGG - chr7_1:69862808-69862827 Msa1034400:intron 45.0%
AAGAATCGGACTCGTTAACC+TGG - chr7_1:69862949-69862968 Msa1034400:intron 45.0%
!!! CGCAGTGGAGTTTTTTCTAG+CGG + chr7_1:69863103-69863122 None:intergenic 45.0%
TTTGACATGCAACTCTGACC+TGG + chr7_1:69863389-69863408 None:intergenic 45.0%
TACATGTTCGTAGGACTTGG+AGG + chr7_1:69863415-69863434 None:intergenic 45.0%
! GGTGTTTCAGGTAGATCATG+TGG + chr7_1:69863484-69863503 None:intergenic 45.0%
ATGGACTCAGCAATGTCACT+TGG + chr7_1:69863550-69863569 None:intergenic 45.0%
TGCTGAGTCCATAACAGCTA+AGG - chr7_1:69863558-69863577 Msa1034400:intron 45.0%
TGAAGTGAAGTCACCTGTCA+AGG - chr7_1:69863777-69863796 Msa1034400:intron 45.0%
GAAGTGAAGTCACCTGTCAA+GGG - chr7_1:69863778-69863797 Msa1034400:intron 45.0%
GAAGACCTTCGCGAATTGTT+AGG + chr7_1:69863895-69863914 None:intergenic 45.0%
AATTCGCGAAGGTCTTCTCT+TGG - chr7_1:69863898-69863917 Msa1034400:intron 45.0%
TTGCTTTCTGAACGAACAGG+AGG + chr7_1:69864279-69864298 None:intergenic 45.0%
GTCTTGCTTTCTGAACGAAC+AGG + chr7_1:69864282-69864301 None:intergenic 45.0%
AAAGCAAGACTTCGAAACGG+TGG - chr7_1:69864292-69864311 Msa1034400:five_prime_UTR 45.0%
AAACGGTGGCTATAGACAAC+AGG - chr7_1:69864306-69864325 Msa1034400:five_prime_UTR 45.0%
!! AGAGTCAGTTCTAGCCTTGT+TGG + chr7_1:69864351-69864370 None:intergenic 45.0%
AGGACAAGCTCCAATTTGGT+TGG - chr7_1:69864376-69864395 Msa1034400:five_prime_UTR 45.0%
!! AAAAAAAATATATATATTAC+AGG + chr7_1:69860434-69860453 None:intergenic 5.0%
!! AAAAAAAATTAAAATTTAGA+TGG + chr7_1:69861757-69861776 None:intergenic 5.0%
GAAAACCAAGTGGGTCCTCT+TGG - chr7_1:69857880-69857899 Msa1034400:intron 50.0%
TCATCCTGGTGCAGTACCTA+AGG - chr7_1:69857984-69858003 Msa1034400:intron 50.0%
AGGCTGAGAATCCCAAGCAA+GGG + chr7_1:69858196-69858215 None:intergenic 50.0%
AAGGCTGAGAATCCCAAGCA+AGG + chr7_1:69858197-69858216 None:intergenic 50.0%
TTGAGGTTGAGCTGTGGTCA+TGG - chr7_1:69858477-69858496 Msa1034400:CDS 50.0%
CAAACGCCTACATGCATCAG+AGG + chr7_1:69858799-69858818 None:intergenic 50.0%
CTCTGATGCATGTAGGCGTT+TGG - chr7_1:69858797-69858816 Msa1034400:CDS 50.0%
TGCAGCTAGCCATCAGCTAA+AGG + chr7_1:69858966-69858985 None:intergenic 50.0%
GTTTCTGCTGCATCCAGTGA+AGG + chr7_1:69859467-69859486 None:intergenic 50.0%
ACTGGATGCAGCAGAAACTG+TGG - chr7_1:69859469-69859488 Msa1034400:CDS 50.0%
GCCATCTATGAAGTTCCCTG+AGG - chr7_1:69859743-69859762 Msa1034400:CDS 50.0%
ACGCTCAAGAACCAATGCTG+TGG - chr7_1:69859979-69859998 Msa1034400:CDS 50.0%
CTCTGCACGTCAAAATCCCA+AGG - chr7_1:69860394-69860413 Msa1034400:intron 50.0%
!!! CGGATTTTTGGTCCAACAGC+TGG - chr7_1:69861375-69861394 Msa1034400:intron 50.0%
ATGTTGCAGAGTGGTCCTTC+AGG - chr7_1:69861780-69861799 Msa1034400:intron 50.0%
TCCTTCAGGAGGAACATCCA+AGG - chr7_1:69861794-69861813 Msa1034400:intron 50.0%
TCCTTGGATGTTCCTCCTGA+AGG + chr7_1:69861798-69861817 None:intergenic 50.0%
AGCTCCGGATCTCTAATGTG+AGG + chr7_1:69862112-69862131 None:intergenic 50.0%
GCCTTCCTGATGCTAGATTG+CGG - chr7_1:69862150-69862169 Msa1034400:CDS 50.0%
ACCGCAATCTAGCATCAGGA+AGG + chr7_1:69862154-69862173 None:intergenic 50.0%
ACTGACCGCAATCTAGCATC+AGG + chr7_1:69862158-69862177 None:intergenic 50.0%
GCGGTCAGTGAACTCTACAA+CGG - chr7_1:69862169-69862188 Msa1034400:CDS 50.0%
GACCCTCATGAAACTTGGAG+AGG - chr7_1:69862199-69862218 Msa1034400:intron 50.0%
CTACTCTTTCACTTCCGGCA+AGG + chr7_1:69862454-69862473 None:intergenic 50.0%
CGTGATCACATCTCCCAAAC+AGG + chr7_1:69862537-69862556 None:intergenic 50.0%
AGTCCCGAAGCAGATTCCTT+TGG - chr7_1:69862774-69862793 Msa1034400:intron 50.0%
AGGGTTTCCACTGTGGATCT+TGG - chr7_1:69862828-69862847 Msa1034400:intron 50.0%
GGGTTTCCACTGTGGATCTT+GGG - chr7_1:69862829-69862848 Msa1034400:intron 50.0%
GGTTTCCACTGTGGATCTTG+GGG - chr7_1:69862830-69862849 Msa1034400:intron 50.0%
ACTGCTTCTGGATCTTGCTG+TGG + chr7_1:69863331-69863350 None:intergenic 50.0%
!! TAAGTGCTGCTTCCCTTGAC+AGG + chr7_1:69863793-69863812 None:intergenic 50.0%
GTCAAGGGAAGCAGCACTTA+TGG - chr7_1:69863793-69863812 Msa1034400:intron 50.0%
CAGCTAGTGAGAGGCCAAAA+AGG - chr7_1:69863839-69863858 Msa1034400:intron 50.0%
AACTTACAGGCTACTGGGAC+TGG + chr7_1:69863931-69863950 None:intergenic 50.0%
CTTTCTGAACGAACAGGAGG+AGG + chr7_1:69864276-69864295 None:intergenic 50.0%
CGGGTTACGAACCTGAGGTA+TGG + chr7_1:69857401-69857420 None:intergenic 55.0%
! TGGTTCGGGTTACGAACCTG+AGG + chr7_1:69857406-69857425 None:intergenic 55.0%
GGGTGAGTTGTGAGAAGGGT+TGG + chr7_1:69857449-69857468 None:intergenic 55.0%
GGGTGGGTGAGTTGTGAGAA+GGG + chr7_1:69857453-69857472 None:intergenic 55.0%
TGGGTGGGTGAGTTGTGAGA+AGG + chr7_1:69857454-69857473 None:intergenic 55.0%
TTTGGTCCAACAGCTGGCCA+AGG - chr7_1:69861381-69861400 Msa1034400:intron 55.0%
ACTCTACCTTGGCCAGCTGT+TGG + chr7_1:69861390-69861409 None:intergenic 55.0%
TTGCAGAGTGGTCCTTCAGG+AGG - chr7_1:69861783-69861802 Msa1034400:intron 55.0%
ATCCGGAGCTGCAACGATGA+TGG - chr7_1:69862122-69862141 Msa1034400:intron 55.0%
AGCCATCATCGTTGCAGCTC+CGG + chr7_1:69862127-69862146 None:intergenic 55.0%
GCAACTGCGAATGCAGTTCC+CGG + chr7_1:69862417-69862436 None:intergenic 55.0%
TGCTCAGAGGGTTTCCACTG+TGG - chr7_1:69862821-69862840 Msa1034400:intron 55.0%
CGCCAATAGCAGCTAGTGAG+AGG - chr7_1:69863830-69863849 Msa1034400:intron 55.0%
GGCCTCTCACTAGCTGCTAT+TGG + chr7_1:69863835-69863854 None:intergenic 55.0%
CCTTCGCGAATTGTTAGGCC+CGG + chr7_1:69863890-69863909 None:intergenic 55.0%
TCGCGAAGGTCTTCTCTTGG+AGG - chr7_1:69863901-69863920 Msa1034400:intron 55.0%
CGCGAAGGTCTTCTCTTGGA+GGG - chr7_1:69863902-69863921 Msa1034400:CDS 55.0%
CTAAGTCTTCGTGGGCGCAG+TGG + chr7_1:69863118-69863137 None:intergenic 60.0%
CGCGAATTGTTAGGCCCGGA+TGG + chr7_1:69863886-69863905 None:intergenic 60.0%
CCGGGCCTAACAATTCGCGA+AGG - chr7_1:69863887-69863906 Msa1034400:intron 60.0%
GGGAGATGTGATCACGGCGC+TGG - chr7_1:69862541-69862560 Msa1034400:intron 65.0%
GGCAGCCCCAAGATCCACAG+TGG + chr7_1:69862838-69862857 None:intergenic 65.0%
CTGTGGATCTTGGGGCTGCC+CGG - chr7_1:69862838-69862857 Msa1034400:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 69857334 69864573 69857334 ID=Msa1034400;Name=Msa1034400
chr7_1 mRNA 69857334 69864573 69857334 ID=Msa1034400-mRNA-1;Parent=Msa1034400;Name=Msa1034400-mRNA-1;_AED=0.10;_eAED=0.10;_QI=299|0.88|0.84|1|0.88|0.89|19|253|1028
chr7_1 exon 69857334 69857660 69857334 ID=Msa1034400-mRNA-1:exon:16570;Parent=Msa1034400-mRNA-1
chr7_1 exon 69858063 69858148 69858063 ID=Msa1034400-mRNA-1:exon:16569;Parent=Msa1034400-mRNA-1
chr7_1 exon 69858245 69858885 69858245 ID=Msa1034400-mRNA-1:exon:16568;Parent=Msa1034400-mRNA-1
chr7_1 exon 69859005 69859168 69859005 ID=Msa1034400-mRNA-1:exon:16567;Parent=Msa1034400-mRNA-1
chr7_1 exon 69859278 69859528 69859278 ID=Msa1034400-mRNA-1:exon:16566;Parent=Msa1034400-mRNA-1
chr7_1 exon 69859631 69859815 69859631 ID=Msa1034400-mRNA-1:exon:16565;Parent=Msa1034400-mRNA-1
chr7_1 exon 69859882 69860118 69859882 ID=Msa1034400-mRNA-1:exon:16564;Parent=Msa1034400-mRNA-1
chr7_1 exon 69860286 69860392 69860286 ID=Msa1034400-mRNA-1:exon:16563;Parent=Msa1034400-mRNA-1
chr7_1 exon 69860505 69860678 69860505 ID=Msa1034400-mRNA-1:exon:16562;Parent=Msa1034400-mRNA-1
chr7_1 exon 69860777 69860872 69860777 ID=Msa1034400-mRNA-1:exon:16561;Parent=Msa1034400-mRNA-1
chr7_1 exon 69860975 69861056 69860975 ID=Msa1034400-mRNA-1:exon:16560;Parent=Msa1034400-mRNA-1
chr7_1 exon 69861183 69861254 69861183 ID=Msa1034400-mRNA-1:exon:16559;Parent=Msa1034400-mRNA-1
chr7_1 exon 69861492 69861593 69861492 ID=Msa1034400-mRNA-1:exon:16558;Parent=Msa1034400-mRNA-1
chr7_1 exon 69862143 69862214 69862143 ID=Msa1034400-mRNA-1:exon:16557;Parent=Msa1034400-mRNA-1
chr7_1 exon 69862324 69862427 69862324 ID=Msa1034400-mRNA-1:exon:16556;Parent=Msa1034400-mRNA-1
chr7_1 exon 69863028 69863283 69863028 ID=Msa1034400-mRNA-1:exon:16555;Parent=Msa1034400-mRNA-1
chr7_1 exon 69863596 69863745 69863596 ID=Msa1034400-mRNA-1:exon:16554;Parent=Msa1034400-mRNA-1
chr7_1 exon 69863902 69864059 69863902 ID=Msa1034400-mRNA-1:exon:16553;Parent=Msa1034400-mRNA-1
chr7_1 exon 69864199 69864573 69864199 ID=Msa1034400-mRNA-1:exon:16552;Parent=Msa1034400-mRNA-1
chr7_1 five_prime_UTR 69864275 69864573 69864275 ID=Msa1034400-mRNA-1:five_prime_utr;Parent=Msa1034400-mRNA-1
chr7_1 CDS 69864199 69864274 69864199 ID=Msa1034400-mRNA-1:cds;Parent=Msa1034400-mRNA-1
chr7_1 CDS 69863902 69864059 69863902 ID=Msa1034400-mRNA-1:cds;Parent=Msa1034400-mRNA-1
chr7_1 CDS 69863596 69863745 69863596 ID=Msa1034400-mRNA-1:cds;Parent=Msa1034400-mRNA-1
chr7_1 CDS 69863028 69863283 69863028 ID=Msa1034400-mRNA-1:cds;Parent=Msa1034400-mRNA-1
chr7_1 CDS 69862324 69862427 69862324 ID=Msa1034400-mRNA-1:cds;Parent=Msa1034400-mRNA-1
chr7_1 CDS 69862143 69862214 69862143 ID=Msa1034400-mRNA-1:cds;Parent=Msa1034400-mRNA-1
chr7_1 CDS 69861492 69861593 69861492 ID=Msa1034400-mRNA-1:cds;Parent=Msa1034400-mRNA-1
chr7_1 CDS 69861183 69861254 69861183 ID=Msa1034400-mRNA-1:cds;Parent=Msa1034400-mRNA-1
chr7_1 CDS 69860975 69861056 69860975 ID=Msa1034400-mRNA-1:cds;Parent=Msa1034400-mRNA-1
chr7_1 CDS 69860777 69860872 69860777 ID=Msa1034400-mRNA-1:cds;Parent=Msa1034400-mRNA-1
chr7_1 CDS 69860505 69860678 69860505 ID=Msa1034400-mRNA-1:cds;Parent=Msa1034400-mRNA-1
chr7_1 CDS 69860286 69860392 69860286 ID=Msa1034400-mRNA-1:cds;Parent=Msa1034400-mRNA-1
chr7_1 CDS 69859882 69860118 69859882 ID=Msa1034400-mRNA-1:cds;Parent=Msa1034400-mRNA-1
chr7_1 CDS 69859631 69859815 69859631 ID=Msa1034400-mRNA-1:cds;Parent=Msa1034400-mRNA-1
chr7_1 CDS 69859278 69859528 69859278 ID=Msa1034400-mRNA-1:cds;Parent=Msa1034400-mRNA-1
chr7_1 CDS 69859005 69859168 69859005 ID=Msa1034400-mRNA-1:cds;Parent=Msa1034400-mRNA-1
chr7_1 CDS 69858245 69858885 69858245 ID=Msa1034400-mRNA-1:cds;Parent=Msa1034400-mRNA-1
chr7_1 CDS 69858063 69858148 69858063 ID=Msa1034400-mRNA-1:cds;Parent=Msa1034400-mRNA-1
chr7_1 CDS 69857587 69857660 69857587 ID=Msa1034400-mRNA-1:cds;Parent=Msa1034400-mRNA-1
chr7_1 three_prime_UTR 69857334 69857586 69857334 ID=Msa1034400-mRNA-1:three_prime_utr;Parent=Msa1034400-mRNA-1
Gene Sequence

>Msa1034400

ATGATCATGATGGAGAATTGTTCAAGAAATGGGTTTCATGATTTCAAAATGTCTTCAAGAAAAGCTGAAGAAGCAGCTTTGAGACGTTATGAAGCAACCCAATGGCTTGAAAACCAAGTGGGTCCTCTTGGAATATCACATCAACCTACTGAGAGAGAACTTGTTTCTTGCTTGAGAAATGGTCTCATTCTTTGTAAAGCCATTAACAAGATTCATCCTGGTGCAGTACCTAAGGTTGTTGATACTCAAGTGCCATTACAACAATCCCTTGCTTGGGATTCTCAGCCTTTACCTGCATATCAGTATTTTGAAAATGTGCGCAATTTTTTGAACGCGGCTGATGAATTAAAGCTTCCCGCTTTTGAAGCTTCTGATCTTGAAAGGGAAAGTGTAGAGAATGGTTCTGCAGGAAAAATTGTTGATTGTATTCTATCACTTAAATGGTTTCATGAGTCGAAGCAGATGAGCAATCAAAGTGGATCCAGCAAACGCTCAAAATCTCCTTTAGTTTTGCAATCAATCAATAGATTGCAACAAAAAGCCACTACTGCATTACCCTCTGATGCATGTAGGCGTTTGGATTTGTCTGCAACATCGGAAATAAAGCCTCCTGCTGAGAGTAATGTTCAAAAACAAGAAGCAGAAACTGTGGAGTCACTTGCCAATATGCTCGTTGACCGTATGCTTTATGCCAAAGAAAATATCGATGGAAATCTTTTTGCTTCTCTTCGCAATGGAAACCTGGATCAAATAGACCTATTTAATCAGATTTTGACTGGTTGTTGTGTGGAACAGCCATCTATGAAGTTCCCTGAGTTGCTATTAAAGAATTTTAAAAAAGAAGGGAGTAGCTTACCACCTCATTTCACTTCCAAACCTACAGAATCAGACACTTTCTCTGCACGTCAAAATCCCAAGTGTAGAGCTTGCTCTGGAAAGTGCACTTGCAACCACAAGCATCTCATAGATATACAGAAAAAAGAACTTCAGGATCTCAAAGCATTGAAGTTGAAAATTAAGAATGAGTTTGAAGAAATGCAATCACAGTTTCAGAGTTTTTTCAAAGATATAGGTTGTCAAGTTAATGAGATGTCAACCAAAGCTCTTGGCTATCAAAAAGTAGTCGAAGAGAACAGAAAGCTATACAACATGGTCCAAGATTTGAAAGGCAACATTCGAGTATACTGCAGAATCAGACCTACATTTAGGGCTGAATCCAAGACTGTAGTTGATTTCATTGGGGAAGACGGTTCTCTGTGCATTTTAGATCCATCAAAAACACTAAAAGATGGAAGAAAACTGTTTCAGTTTAATCGGATTTTTGGTCCAACAGCTGGCCAAGATGAGGTTTATAGGGACACTCAACCATTAATTAGATCAGTGATGGATGGATACAACGTTTGTATTTTTGCTTATGGTCAAACTGGATCTGGGAAGACTCACACAATGAGTGGTCCTTCAGGAGGAACATCCAAGGATATGGGAATCAATTATTTGGCTCTTAATGATTTGTTTCAAATGTCTAGTGAAAGGAAGGACAACATAAAGTATGAAATTTATGTCCAAATGGTCGAGATTTACAATGAACAAGTAAGAGATCTACTTGCAGAGGACAAAACAGAAAACAAATATCCTTTTTCATATTCATTCTTCAATAAATATTGTCAGAAATATATTCATACTATTTTTATTTCCTTAACTGACCTCACATTAGAGATCCGGAGCTGCAACGATGATGGCTTGAGCCTTCCTGATGCTAGATTGCGGTCAGTGAACTCTACAACGGATGTTATGACCCTCATGAAACTTGGAGAGGTTAACCGTGCTGTCAGTTCTACTGCAATCAACAATAGGAGTAGTCGTTCACACAGTGTACTTACTGTGCATGTTAGTGGCAAAGATACATCCGGGAACTGCATTCGCAGTTGCCTTCATTTAGTAGACCTTGCCGGAAGTGAAAGAGTAGACAAATCTGAAGTCACAGGAGATAGACTAAAGGAAGCGCTATACATTAACAAGTCTCTTTCCTGTTTGGGAGATGTGATCACGGCGCTGGCTCAGAAGAATTCTCACATTCCTTACAGGAACAGCAAACTCACACTTCTTTTGCAGGACTCCTTAGGTGGACATGCTAAAACATTAATGTTTGCGCATGTGAGTCCCGAAGCAGATTCCTTTGGTGAAACAGTGAGTACTCTGAAGTTTGCTCAGAGGGTTTCCACTGTGGATCTTGGGGCTGCCCGGATGAACAAAGAAACCAGTGAGGTTATGCAACTTAAAGCACAGGTTGAGAACCTTAAGATTGCATTGGCAAACAAGGAAAACTCAAAACCAATGTTCAATAGAACTAAAGAATTCGACACTCCGCTAGAAAAAACTCCACTGCGCCCACGAAGACTTAGTATTGAGAATTGCAGCGGAATAAAGACCAACAAACCTGTGAAAGCTGATGATAAAAATGGAGCTAAATCACCTTCTTATATAGCCCGTTCAAGAAGATTAAGCTTGGAAGGTCCAAGAACTGTCAAAAAAGCACCGGCATGTGTAAACAAAACTTTACAGTTTGAGCCAATATCTCAACAGAAAGATCGTCCACAGCAAGATCCAGAAGCAGTGTCAAAGCTAAATGGCCAATTAAGCAATGGCAATTCCAGGTCAGAGTTGCATGTCAAAGCTCCTCCAAGTCCTACGAACATGTATCAGAAGAGGTGTATAAAAGTTGATAGTGAAGTAGTCCAAATTCACCCACATGATCTACCTGAAACACCTGAAGCACAAATGCTAGATAAAAATGATTCAAACAGAATTGTGCCAAGTGACATTGCTGAGTCCATAACAGCTAAGGTTATAGGCACAAATGGAAAAGGGTCCCAGTTTAGAAGATCCCTAAGAACAATTGGGAAACTGATTAATGGACCTGATAAGAAAAACCAACAAATTATGGTTGAAGTGAAGTCACCTGTCAAGGGAAGCAGCACTTATGGAAGTCAGATAAAGTCGCCAATAGCAGCTAATGAGACAGAGAGAAATGCTAGAACGCCTCCTCCTGTTCGTTCAGAAAGCAAGACTTCGAAACGGTGGCTATAG
Protein sequence

>Msa1034400

MIMMENCSRNGFHDFKMSSRKAEEAALRRYEATQWLENQVGPLGISHQPTERELVSCLRNGLILCKAINKIHPGAVPKVVDTQVPLQQSLAWDSQPLPAYQYFENVRNFLNAADELKLPAFEASDLERESVENGSAGKIVDCILSLKWFHESKQMSNQSGSSKRSKSPLVLQSINRLQQKATTALPSDACRRLDLSATSEIKPPAESNVQKQEAETVESLANMLVDRMLYAKENIDGNLFASLRNGNLDQIDLFNQILTGCCVEQPSMKFPELLLKNFKKEGSSLPPHFTSKPTESDTFSARQNPKCRACSGKCTCNHKHLIDIQKKELQDLKALKLKIKNEFEEMQSQFQSFFKDIGCQVNEMSTKALGYQKVVEENRKLYNMVQDLKGNIRVYCRIRPTFRAESKTVVDFIGEDGSLCILDPSKTLKDGRKLFQFNRIFGPTAGQDEVYRDTQPLIRSVMDGYNVCIFAYGQTGSGKTHTMSGPSGGTSKDMGINYLALNDLFQMSSERKDNIKYEIYVQMVEIYNEQVRDLLAEDKTENKYPFSYSFFNKYCQKYIHTIFISLTDLTLEIRSCNDDGLSLPDARLRSVNSTTDVMTLMKLGEVNRAVSSTAINNRSSRSHSVLTVHVSGKDTSGNCIRSCLHLVDLAGSERVDKSEVTGDRLKEALYINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEADSFGETVSTLKFAQRVSTVDLGAARMNKETSEVMQLKAQVENLKIALANKENSKPMFNRTKEFDTPLEKTPLRPRRLSIENCSGIKTNKPVKADDKNGAKSPSYIARSRRLSLEGPRTVKKAPACVNKTLQFEPISQQKDRPQQDPEAVSKLNGQLSNGNSRSELHVKAPPSPTNMYQKRCIKVDSEVVQIHPHDLPETPEAQMLDKNDSNRIVPSDIAESITAKVIGTNGKGSQFRRSLRTIGKLINGPDKKNQQIMVEVKSPVKGSSTYGSQIKSPIAANETERNARTPPPVRSESKTSKRWL*