AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0090440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0090440 MtrunA17_Chr1g0210361 86.780 885 67 7 550 1431 676 1513 0.0 1464
Msa0090440 MtrunA17_Chr1g0210361 92.073 328 26 0 234 561 537 864 0.0 598
Msa0090440 MtrunA17_Chr1g0210361 95.217 230 11 0 1 230 1 230 5.52e-140 468
Msa0090440 MtrunA17_Chr1g0210441 64.530 234 67 5 330 561 35 254 6.74e-83 274
Msa0090440 MtrunA17_Chr1g0210441 64.840 219 71 3 561 778 81 294 2.32e-79 264
Msa0090440 MtrunA17_Chr6g0462201 60.000 240 67 5 324 561 57 269 1.30e-73 248
Msa0090440 MtrunA17_Chr6g0462201 60.731 219 67 3 561 778 109 309 1.59e-69 236
Msa0090440 MtrunA17_Chr8g0357401 57.143 105 30 3 330 433 2 92 2.71e-22 93.2
Msa0090440 MtrunA17_Chr2g0289091 53.061 98 41 2 706 801 208 302 2.32e-17 86.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0090440 AT5G55820.10 26.616 789 367 26 763 1426 970 1671 3.72e-36 150
Msa0090440 AT5G55820.11 26.616 789 367 26 763 1426 1033 1734 4.82e-36 150
Msa0090440 AT5G55820.3 26.616 789 367 26 763 1426 1001 1702 4.96e-36 150
Msa0090440 AT5G55820.8 26.616 789 367 26 763 1426 970 1671 5.52e-36 150
Msa0090440 AT5G55820.7 26.616 789 367 26 763 1426 970 1671 5.52e-36 150
Msa0090440 AT5G55820.9 26.616 789 367 26 763 1426 1033 1734 6.00e-36 150
Msa0090440 AT5G55820.4 26.616 789 367 26 763 1426 1001 1702 6.31e-36 150
Msa0090440 AT5G55820.1 26.616 789 367 26 763 1426 1064 1765 7.56e-36 149
Msa0090440 AT5G55820.6 26.608 793 366 27 763 1426 970 1675 1.47e-35 149
Msa0090440 AT5G55820.2 26.608 793 366 27 763 1426 1001 1706 1.67e-35 148
Msa0090440 AT5G55820.5 26.608 793 366 27 763 1426 1033 1738 1.76e-35 148

Find 330 sgRNAs with CRISPR-Local

Find 642 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCATTTCGAATTTCAAATT+TGG 0.085039 1_2:-72485959 None:intergenic
TGACCCGGGCAAATGGTATT+TGG 0.161741 1_2:-72487934 None:intergenic
TGACCCGAGCAAATGGTATT+TGG 0.162766 1_2:-72488456 None:intergenic
GATGGCATAAACTTGTTATT+TGG 0.170908 1_2:-72493610 None:intergenic
TCCAGATAAATTTGATTTAC+TGG 0.172073 1_2:-72491981 None:intergenic
GCTTTCCTTGGTTATGTTAT+TGG 0.181640 1_2:-72492927 None:intergenic
TCTGAAGCAGTTACTGAAAA+TGG 0.194499 1_2:+72487811 Msa0090440:CDS
TCTGAAGCAGTTACTGAAAA+TGG 0.194499 1_2:+72488333 Msa0090440:CDS
AAAGCCGGCGGTTCTTTATT+TGG 0.203388 1_2:-72488255 None:intergenic
CTTCCATGCATTTCACAATA+AGG 0.205591 1_2:+72494206 Msa0090440:CDS
TTTCTCTTGGCACCATTTAC+TGG 0.213908 1_2:-72491935 None:intergenic
AATATCTTTATAGGCGAAAA+TGG 0.227994 1_2:+72493471 Msa0090440:intron
TTACTATCACGAACACAATT+TGG 0.239451 1_2:+72486749 Msa0090440:CDS
CATCTTCGGTACAAACTCTT+TGG 0.243033 1_2:+72491444 Msa0090440:CDS
AAAAGGAGAAAGATAGAAAA+AGG 0.243572 1_2:+72492611 Msa0090440:CDS
ATACTTGAGGTTCCATTTGC+AGG 0.245367 1_2:-72488699 None:intergenic
GACCCGGGCAAATGGTATTT+GGG 0.249527 1_2:-72487933 None:intergenic
TGGGATAAGATTTGCAAATA+AGG 0.250905 1_2:+72491808 Msa0090440:CDS
CTGTGGAACTTATGAAATTA+TGG 0.259369 1_2:-72488023 None:intergenic
GTCTTTACCTAATGGACTTC+TGG 0.261418 1_2:+72491331 Msa0090440:CDS
AAGGGAAATTGAAGAGAAAA+AGG 0.263230 1_2:+72492594 Msa0090440:CDS
TGGCATCTTGAGGTTAATTC+TGG 0.286561 1_2:+72490963 Msa0090440:CDS
GACCCGAGCAAATGGTATTT+GGG 0.295473 1_2:-72488455 None:intergenic
GCATTTCGAATTTCAAATTT+GGG 0.297640 1_2:-72485958 None:intergenic
AAAGCCGGCGGTTCTTTATC+TGG 0.302558 1_2:-72487733 None:intergenic
TCCAGTAAATCAAATTTATC+TGG 0.309989 1_2:+72491980 Msa0090440:CDS
TCATCATCATCTGATCTATA+TGG 0.312866 1_2:-72493571 None:intergenic
ACCATTTGCCCGGGTCAAAA+TGG 0.315119 1_2:+72487940 Msa0090440:CDS
ACCATTTGCTCGGGTCAAAA+TGG 0.315119 1_2:+72488462 Msa0090440:CDS
GATCCTCCAGAATTGGATTC+AGG 0.318727 1_2:+72486953 Msa0090440:CDS
TCTCCTTCTCCTTGGCTGTT+GGG 0.320549 1_2:-72487232 None:intergenic
CTTTATCAGTCTTTACCTAA+TGG 0.321316 1_2:+72491323 Msa0090440:CDS
TCCAGTAGGTCAAAGTTATC+TGG 0.322998 1_2:+72491893 Msa0090440:CDS
AATTCGAATTTCGGCAGTTC+AGG 0.323378 1_2:+72491476 Msa0090440:CDS
TGATAACGAACCTTCTTGTT+TGG 0.325700 1_2:+72487534 Msa0090440:CDS
TTCCATGCATTTCACAATAA+GGG 0.327299 1_2:+72494207 Msa0090440:CDS
GCTATTTATTCCATCCCTAT+TGG 0.328135 1_2:-72487677 None:intergenic
CTTTATCTGGTGACATTCTC+CGG 0.328594 1_2:-72487720 None:intergenic
AGTATGAAAGATCCAGTAAA+TGG 0.329638 1_2:+72491923 Msa0090440:CDS
CTGTTAGCAGAAACTTATAT+TGG 0.331558 1_2:+72490836 Msa0090440:intron
TTCTCCTTCTCCTTGGCTGT+TGG 0.335118 1_2:-72487233 None:intergenic
GGGATAAGATTTGCAAATAA+GGG 0.336599 1_2:+72491809 Msa0090440:CDS
GATAACGAACCTTCTTGTTT+GGG 0.337556 1_2:+72487535 Msa0090440:CDS
GTAAACCGACCATTACAATT+TGG 0.340754 1_2:-72491422 None:intergenic
AAACTGAAGGGATTTGCTTC+TGG 0.342233 1_2:-72490894 None:intergenic
CTTTATTTGGTGACATTCTC+CGG 0.344696 1_2:-72488242 None:intergenic
ATACTCGAGGTTCCACTTGC+AGG 0.347380 1_2:-72488177 None:intergenic
AAGAATCTGCCAGAACTTCC+TGG 0.347539 1_2:-72487786 None:intergenic
CATTAGGTAAAGACTGATAA+AGG 0.353331 1_2:-72491322 None:intergenic
AAAGAAGGAGGAAGAAGAAA+TGG 0.360491 1_2:+72492552 Msa0090440:CDS
TGATGACACAAATGTTGATT+TGG 0.361058 1_2:+72488422 Msa0090440:CDS
CCATTTCCATTCTGCATGTC+AGG 0.361076 1_2:-72491788 None:intergenic
CTGAAATTTCTCCTTCTCCT+TGG 0.361296 1_2:-72487240 None:intergenic
GATCGATTTAATTCGAATTT+CGG 0.363714 1_2:+72491467 Msa0090440:CDS
TCAACATTTGGCACATGATC+AGG 0.368921 1_2:+72488755 Msa0090440:CDS
TAAAGACCCACCGTCTATAC+TGG 0.369699 1_2:-72487359 None:intergenic
ACTTGCAGGCCTTTGGTCAA+TGG 0.373297 1_2:-72488163 None:intergenic
CCAAGCTTAAATCCTTGATA+TGG 0.374133 1_2:-72487195 None:intergenic
TGTCATTGAAGTTCAACATT+TGG 0.374241 1_2:+72488743 Msa0090440:CDS
CGATGACATCCAGGAAGTTC+TGG 0.374712 1_2:+72487777 Msa0090440:CDS
TCCAGATAACTTTGACCTAC+TGG 0.374996 1_2:-72491894 None:intergenic
ATTTGCAGGCCTTTGGTCAA+TGG 0.375780 1_2:-72488685 None:intergenic
ATGGCCCCTGAATCCAATTC+TGG 0.376414 1_2:-72486959 None:intergenic
TGGAATAAAGGAAGTAAGAT+TGG 0.380644 1_2:-72492071 None:intergenic
GAAAACAAGAGTGTAGTAAA+TGG 0.381490 1_2:+72491836 Msa0090440:CDS
CCTGACATGCAGAATGGAAA+TGG 0.382291 1_2:+72491788 Msa0090440:CDS
TTGCTGCACTAATGGAATAA+AGG 0.383319 1_2:-72492083 None:intergenic
AAATGTTGATTTGGCACAAC+AGG 0.385403 1_2:+72488431 Msa0090440:CDS
ATCTTCGGTACAAACTCTTT+GGG 0.385786 1_2:+72491445 Msa0090440:CDS
TTACGAGATTTGAATTTGAT+TGG 0.385797 1_2:+72491095 Msa0090440:CDS
AGGTTCCATTTGCAGGCCTT+TGG 0.389072 1_2:-72488692 None:intergenic
TGCTCGAGACGAAATGGAAT+TGG 0.390534 1_2:+72491184 Msa0090440:CDS
AATCATCGAGCATGCTCGTC+AGG 0.391925 1_2:+72486101 Msa0090440:CDS
GGGAGGATGCTTCCGTCTTA+AGG 0.395850 1_2:+72487590 Msa0090440:CDS
GCACATTATCTGTTTGCATA+AGG 0.396458 1_2:-72491151 None:intergenic
CATGATCAGGCGGATGATAT+AGG 0.396466 1_2:+72488768 Msa0090440:CDS
ATCACAGACACAGCGAAATC+AGG 0.397100 1_2:-72487619 None:intergenic
TTCAAGTGATCCTCCAGAAT+TGG 0.399473 1_2:+72486946 Msa0090440:CDS
TGATGACACGAATGTTGATT+TGG 0.402058 1_2:+72487900 Msa0090440:CDS
GACGGTTTGTCTGTTTCTCC+AGG 0.403774 1_2:+72491071 Msa0090440:CDS
CTCGTCAGGAATCTCGTCTA+TGG 0.403996 1_2:+72486115 Msa0090440:CDS
CGATGACATACAGGAAGTTC+TGG 0.404380 1_2:+72488299 Msa0090440:CDS
TACTGATTCAGAGTTCCTTT+TGG 0.404488 1_2:-72491861 None:intergenic
AGGTTCCACTTGCAGGCCTT+TGG 0.407847 1_2:-72488170 None:intergenic
AGCTCAGAATTTAACTTTGA+CGG 0.409942 1_2:+72491740 Msa0090440:CDS
ATGACGGCGAAGAGACCAAT+AGG 0.411361 1_2:+72487662 Msa0090440:CDS
TAATGGTCGGTTTACATCTT+CGG 0.411579 1_2:+72491430 Msa0090440:CDS
AATGGACTTCTGGAGGGATA+TGG 0.411763 1_2:+72491341 Msa0090440:CDS
AATAGCCTTGATTTGAAAGA+AGG 0.412758 1_2:+72487694 Msa0090440:CDS
GATTTGCTTCTGGCAACATA+AGG 0.413586 1_2:-72490884 None:intergenic
TCACTAATGCAGGGTAGCTC+TGG 0.414567 1_2:-72491518 None:intergenic
CTACTGCCAACACTAAGGTT+AGG 0.414720 1_2:+72487569 Msa0090440:CDS
ATCAAAATCAAGATGAACTT+TGG 0.415970 1_2:-72487503 None:intergenic
ATTGCTGGTACATTCCAAAA+AGG 0.418242 1_2:+72491563 Msa0090440:CDS
TTTAACGCTAGTTTCTCATC+TGG 0.420033 1_2:+72488390 Msa0090440:CDS
GGAGTGAGAAGAAGAGAGAT+AGG 0.422240 1_2:-72485993 None:intergenic
TAAAGTAGATGTGGCTGAAA+AGG 0.422910 1_2:+72487402 Msa0090440:CDS
TTCTGGAGGGATATGGTCTA+AGG 0.425267 1_2:+72491348 Msa0090440:CDS
GATTGGACTGCTGCAGCTAC+AGG 0.426309 1_2:+72487145 Msa0090440:CDS
ATTCCGTTGAGGATGAGTTT+AGG 0.429419 1_2:-72486153 None:intergenic
GTGAGCGAATGTGCCAATAA+AGG 0.435348 1_2:+72492971 Msa0090440:CDS
ATGCACTGCTCGAGACGAAA+TGG 0.437988 1_2:+72491178 Msa0090440:CDS
TACTGATTCGGAGTTTCTCT+TGG 0.438393 1_2:-72491948 None:intergenic
ACCATCTCCTGACAACCGTT+TGG 0.439507 1_2:-72487110 None:intergenic
GGCCCCAAATACCATTTGCC+CGG 0.441056 1_2:+72487930 Msa0090440:CDS
GGCGTCCTTCTTTCAAATCA+AGG 0.442924 1_2:-72487699 None:intergenic
GTATCTTCCATCACATCTGT+TGG 0.446459 1_2:-72488813 None:intergenic
GCTAGGCTATGCAACTTGTA+TGG 0.447833 1_2:-72491296 None:intergenic
AAGAGAGATAGGTGTGTGTT+TGG 0.448505 1_2:-72485982 None:intergenic
TATCCCTCCAGAAGTCCATT+AGG 0.453030 1_2:-72491338 None:intergenic
GCTCAGAATTTAACTTTGAC+GGG 0.456255 1_2:+72491741 Msa0090440:CDS
TCTTCCTGACTCTACACTCT+TGG 0.458280 1_2:+72488644 Msa0090440:CDS
AAAGCATCCAAACGGTTGTC+AGG 0.460177 1_2:+72487103 Msa0090440:CDS
ACTTCCCGTCCTGCGAATGA+TGG 0.460449 1_2:+72491371 Msa0090440:CDS
ATAGTACCAACTCAGGAATC+AGG 0.462592 1_2:+72494172 Msa0090440:CDS
CAATTTGGAATTCCTTTCAC+TGG 0.462751 1_2:+72486764 Msa0090440:CDS
AAATTCAAATCTCGTAATCC+TGG 0.464191 1_2:-72491089 None:intergenic
TATCTGATTCTGAGGTGAAA+TGG 0.464378 1_2:-72486978 None:intergenic
TATCTTCCATCACATCTGTT+GGG 0.464471 1_2:-72488812 None:intergenic
CTTATCATAACAGCTTTCCT+TGG 0.465240 1_2:-72492939 None:intergenic
ACTTCATTGCGTAAATCAAC+AGG 0.466833 1_2:-72486842 None:intergenic
GATTGCTCGGTCAACAATGC+TGG 0.467716 1_2:+72486917 Msa0090440:CDS
GAAAGCAGGAAAATTATAGA+AGG 0.468631 1_2:+72492806 Msa0090440:CDS
GATTTGAATTTGATTGGTAC+AGG 0.471938 1_2:+72491101 Msa0090440:CDS
ATGCAGTCTATACAGCAATC+TGG 0.472277 1_2:+72486793 Msa0090440:CDS
TTCAGCATGGACGAGAAGGC+GGG 0.473280 1_2:+72490936 Msa0090440:CDS
GAAAATGTTGATGAGATTGC+TGG 0.476098 1_2:+72491548 Msa0090440:CDS
TCCTGACTCTACACTCTTGG+CGG 0.479500 1_2:+72488647 Msa0090440:CDS
GTGTCACAAACTTTAACGCT+AGG 0.480607 1_2:+72487857 Msa0090440:CDS
TGAGTGAGCCATGGAGGAGG+AGG 0.481555 1_2:-72486177 None:intergenic
ATTTGCTTCTGGCAACATAA+GGG 0.485485 1_2:-72490883 None:intergenic
GTATAATCTCCGGAGTTACT+AGG 0.485789 1_2:-72491221 None:intergenic
TGAGGATGAGTTTAGGAAGA+AGG 0.486655 1_2:-72486146 None:intergenic
TCTTCCTGACTCTACACTCT+TGG 0.487334 1_2:+72488122 Msa0090440:CDS
GAATAACAAGGTCAATTGCC+AGG 0.490251 1_2:+72491600 Msa0090440:CDS
ATTGACCAAAGGCCTGCAAA+TGG 0.491085 1_2:+72488687 Msa0090440:CDS
TTCAGTGAATTCTGCAGAGA+AGG 0.491179 1_2:+72487258 Msa0090440:CDS
TGAACTTCAATGACAGCCTC+AGG 0.492780 1_2:-72488735 None:intergenic
CTGACATGCAGAATGGAAAT+GGG 0.498330 1_2:+72491789 Msa0090440:CDS
GGCCCCAAATACCATTTGCT+CGG 0.498943 1_2:+72488452 Msa0090440:CDS
CTTGGTTCTATCTGATTCTG+AGG 0.501944 1_2:-72486986 None:intergenic
TACTGCCAACACTAAGGTTA+GGG 0.502997 1_2:+72487570 Msa0090440:CDS
TGAGAATTCAGTATCACCTC+CGG 0.504133 1_2:-72491048 None:intergenic
CTTCCCGTCCTGCGAATGAT+GGG 0.505343 1_2:+72491372 Msa0090440:CDS
TCACAGACACAGCGAAATCA+GGG 0.506326 1_2:-72487618 None:intergenic
ACCCGGGCAAATGGTATTTG+GGG 0.506544 1_2:-72487932 None:intergenic
ATGGTGATAATGCTGGTGAT+TGG 0.506931 1_2:+72487128 Msa0090440:CDS
TAGCAGAAACTTATATTGGA+TGG 0.507210 1_2:+72490840 Msa0090440:intron
AACTTTGCTAGTGACACTAC+TGG 0.508099 1_2:-72487031 None:intergenic
ATAACAAGTTTATGCCATCA+TGG 0.508757 1_2:+72493614 Msa0090440:CDS
AAGGAGAACATTGCTGAAGT+TGG 0.509222 1_2:+72487277 Msa0090440:CDS
TGGACGAGAAGGCGGGGTCA+TGG 0.509251 1_2:+72490943 Msa0090440:CDS
GATTGCCGACCAAATTGTAA+TGG 0.510039 1_2:+72491413 Msa0090440:CDS
ATTGTCTTCTTTGATACTTG+AGG 0.510805 1_2:-72488712 None:intergenic
GTTACTAGTCAAACAAAAGA+AGG 0.511472 1_2:+72487322 Msa0090440:CDS
AATTTGGTCGGCAATCAGAA+AGG 0.512897 1_2:-72491406 None:intergenic
TCTTGTAAAACTGATGTTGA+AGG 0.513684 1_2:-72491686 None:intergenic
GTGTAGTAAATGGTGCCAAA+AGG 0.515561 1_2:+72491846 Msa0090440:CDS
GACATGAAGCTGCAAGAGCA+TGG 0.516786 1_2:+72492646 Msa0090440:CDS
ATCCTCCAGAATTGGATTCA+GGG 0.516829 1_2:+72486954 Msa0090440:CDS
ACCCGAGCAAATGGTATTTG+GGG 0.517000 1_2:-72488454 None:intergenic
TCAATGACAATGACAGCCTC+GGG 0.517083 1_2:-72488213 None:intergenic
CTTCTTCTCACTCCACCCTC+CGG 0.517415 1_2:+72486002 Msa0090440:five_prime_UTR
GAAGTTACTCGATGACATAC+AGG 0.519030 1_2:+72488290 Msa0090440:CDS
TCCGCCAAGAGTGTAGAGTC+AGG 0.519393 1_2:-72488648 None:intergenic
ACCAAGTGATGTATAATCTC+CGG 0.519918 1_2:-72491231 None:intergenic
GAATGTTGATTTGGCACGGC+AGG 0.523686 1_2:+72487909 Msa0090440:CDS
CTTGTAAAACTGATGTTGAA+GGG 0.523957 1_2:-72491685 None:intergenic
ACTCCCATCATTCGCAGGAC+GGG 0.525252 1_2:-72491375 None:intergenic
ATAAGGAACCCTTCGAACTC+TGG 0.525981 1_2:-72491134 None:intergenic
TCCAAACGGTTGTCAGGAGA+TGG 0.526289 1_2:+72487109 Msa0090440:CDS
GTCGATGATGTCAGCACCGG+AGG 0.528142 1_2:-72486018 None:intergenic
GAGTGAGTGAGCCATGGAGG+AGG 0.529315 1_2:-72486180 None:intergenic
TTCAATGACAATGACAGCCT+CGG 0.529539 1_2:-72488214 None:intergenic
CGGCAATCAGAAAGGGACCT+TGG 0.529723 1_2:-72491398 None:intergenic
GCCCCAAATACCATTTGCTC+GGG 0.529969 1_2:+72488453 Msa0090440:CDS
TCTGCCAAGAGTGTAGAGTC+AGG 0.530112 1_2:-72488126 None:intergenic
CCGCAGGCGCTGCTCAGTAA+CGG 0.530537 1_2:+72487973 Msa0090440:CDS
CCGCAGGCGCTGCTCAGTAA+CGG 0.530537 1_2:+72488495 Msa0090440:CDS
CCATATCAAGGATTTAAGCT+TGG 0.530852 1_2:+72487195 Msa0090440:CDS
ACATAAGGGTGTCTGAGCTT+CGG 0.531383 1_2:-72490869 None:intergenic
TGGAAACTCTCAGAGACTCT+TGG 0.532583 1_2:-72487004 None:intergenic
TGCATTAGCTAGTGGACGTA+AGG 0.533228 1_2:+72491709 Msa0090440:CDS
TGAGTCAATACTAAAACTGA+AGG 0.533610 1_2:-72490907 None:intergenic
GTGAAGAAGTCCATGAAAGC+AGG 0.535567 1_2:+72492792 Msa0090440:CDS
GCCGACCAAATTGTAATGGT+CGG 0.536408 1_2:+72491417 Msa0090440:CDS
ATTTGGTCGGCAATCAGAAA+GGG 0.536631 1_2:-72491405 None:intergenic
ACCGACCATTACAATTTGGT+CGG 0.539596 1_2:-72491418 None:intergenic
TAATAGCCCAACAGATGTGA+TGG 0.541873 1_2:+72488806 Msa0090440:CDS
GAAGTTACTCGATGACATCC+AGG 0.542475 1_2:+72487768 Msa0090440:CDS
GCCCCAAATACCATTTGCCC+GGG 0.542500 1_2:+72487931 Msa0090440:CDS
AAGAAACCTGACATGCAGAA+TGG 0.545089 1_2:+72491782 Msa0090440:CDS
ATGACGGTGATACGGGGCGC+AGG 0.545137 1_2:+72486879 Msa0090440:CDS
AAGACTGATAAAGGTTTGCT+AGG 0.546526 1_2:-72491313 None:intergenic
GAGGCTGTCATTGTCATTGA+AGG 0.549530 1_2:+72488216 Msa0090440:CDS
AGATGTGGCTGAAAAGGACT+TGG 0.549953 1_2:+72487408 Msa0090440:CDS
ATTTCGTCTCGAGCAGTGCA+TGG 0.550577 1_2:-72491176 None:intergenic
ATCCCTTATTGTGAAATGCA+TGG 0.550967 1_2:-72494209 None:intergenic
TAACAAGTTTATGCCATCAT+GGG 0.551395 1_2:+72493615 Msa0090440:CDS
AGTTTATGCCATCATGGGCA+AGG 0.551787 1_2:+72493620 Msa0090440:CDS
AAACTTATATTGGATGGAAG+AGG 0.551998 1_2:+72490846 Msa0090440:CDS
AAGGTCAAGGTCGAGGCAGA+AGG 0.553511 1_2:+72487057 Msa0090440:CDS
ATATGGTCTTCTTGTAGAGA+CGG 0.553596 1_2:-72487178 None:intergenic
ATCCTCCCTAACCTTAGTGT+TGG 0.555208 1_2:-72487575 None:intergenic
ACGGAATTCCTCCTCCTCCA+TGG 0.557225 1_2:+72486169 Msa0090440:CDS
CCGTTACTGAGCAGCGCCTG+CGG 0.558915 1_2:-72487973 None:intergenic
CCGTTACTGAGCAGCGCCTG+CGG 0.558915 1_2:-72488495 None:intergenic
TCAACATTTGTGTCATCAGT+AGG 0.559577 1_2:-72488417 None:intergenic
TCATTGTCATTGAAGGATGC+CGG 0.561205 1_2:+72488223 Msa0090440:CDS
CTACGTCCTGATTCCTGAGT+TGG 0.562596 1_2:-72494178 None:intergenic
TCAGCATGGACGAGAAGGCG+GGG 0.563169 1_2:+72490937 Msa0090440:CDS
GAAGAGGAAGGAGTTCATGA+TGG 0.569667 1_2:+72492516 Msa0090440:CDS
GAGGTTCAGCATGGACGAGA+AGG 0.569676 1_2:+72490932 Msa0090440:CDS
ACAACAAACCTTGCCCATGA+TGG 0.570513 1_2:-72493628 None:intergenic
GTCACCAAATAAAGAACCGC+CGG 0.570920 1_2:+72488251 Msa0090440:CDS
AGTTAAAGTGAGAAAAGAAG+AGG 0.571335 1_2:+72488866 Msa0090440:CDS
AGACATGAAGTTGTGTCTGA+AGG 0.572334 1_2:+72486725 Msa0090440:CDS
AAATGGTGACTTATTGCCGC+AGG 0.572570 1_2:+72487957 Msa0090440:CDS
AAATGGTGACTTATTGCCGC+AGG 0.572570 1_2:+72488479 Msa0090440:CDS
ATTGTCTTCTTTGATACTCG+AGG 0.573526 1_2:-72488190 None:intergenic
TCGTCAGGAATCTCGTCTAT+GGG 0.574025 1_2:+72486116 Msa0090440:CDS
ATTATTCGTAAAACTATCTG+TGG 0.574352 1_2:-72488562 None:intergenic
ATGTCATCGAGTAACTTCAA+TGG 0.574622 1_2:-72487763 None:intergenic
ATGTCATCGAGTAACTTCAA+TGG 0.574622 1_2:-72488285 None:intergenic
CTGCGAATGATGGGAGTCCA+AGG 0.576071 1_2:+72491381 Msa0090440:CDS
GCTGAATCGCTGATGGTCAA+AGG 0.576992 1_2:-72492905 None:intergenic
ACATGAAGCTGCAAGAGCAT+GGG 0.577354 1_2:+72492647 Msa0090440:CDS
TTACAAGATGCATTAGCTAG+TGG 0.577597 1_2:+72491701 Msa0090440:CDS
ATGAGTCTTCCTAGTAACTC+CGG 0.578024 1_2:+72491212 Msa0090440:CDS
ATAACGAACCTTCTTGTTTG+GGG 0.578757 1_2:+72487536 Msa0090440:CDS
GGAGTAGAAGAATAGCATGA+TGG 0.578879 1_2:-72491275 None:intergenic
TGACGGCGAAGAGACCAATA+GGG 0.579189 1_2:+72487663 Msa0090440:CDS
GACTCCCATCATTCGCAGGA+CGG 0.579832 1_2:-72491376 None:intergenic
CTTGGACTCCCATCATTCGC+AGG 0.580161 1_2:-72491380 None:intergenic
AAGCTTTACCAGAGTTCGAA+GGG 0.580210 1_2:+72491126 Msa0090440:CDS
GTCACCAGATAAAGAACCGC+CGG 0.581391 1_2:+72487729 Msa0090440:CDS
CAACCCAACAGCCAAGGAGA+AGG 0.582039 1_2:+72487229 Msa0090440:CDS
CTGCATTGTTGACCAGTGAA+AGG 0.582249 1_2:-72486776 None:intergenic
GAAGCTTTACCAGAGTTCGA+AGG 0.582405 1_2:+72491125 Msa0090440:CDS
GCCTCAGCTTTAATCAGAGA+AGG 0.582924 1_2:-72492454 None:intergenic
AAGATTTGCAAATAAGGGGA+AGG 0.585481 1_2:+72491814 Msa0090440:CDS
ACTCACTACTGCCAACACTA+AGG 0.586002 1_2:+72487564 Msa0090440:CDS
CTAGTGACACTACTGGGTCA+TGG 0.586152 1_2:-72487024 None:intergenic
ACACGAATGTTGATTTGGCA+CGG 0.586444 1_2:+72487905 Msa0090440:CDS
GAGAATTCAGTATCACCTCC+GGG 0.587873 1_2:-72491047 None:intergenic
AATAACAAGGTCAATTGCCA+GGG 0.588005 1_2:+72491601 Msa0090440:CDS
GTTCAGCATGGACGAGAAGG+CGG 0.588386 1_2:+72490935 Msa0090440:CDS
TTTACCTAATGGACTTCTGG+AGG 0.588500 1_2:+72491334 Msa0090440:CDS
ATTATTAGTAAAACTATCTG+TGG 0.589436 1_2:-72488040 None:intergenic
GGATAAGATTTGCAAATAAG+GGG 0.589492 1_2:+72491810 Msa0090440:CDS
TCCGGAGATTATACATCACT+TGG 0.590072 1_2:+72491230 Msa0090440:CDS
TTCAATGGTTCTGACAAAGC+CGG 0.590356 1_2:-72487748 None:intergenic
TTCAATGGTTCTGACAAAGC+CGG 0.590356 1_2:-72488270 None:intergenic
CATTTCGAATTTCAAATTTG+GGG 0.592023 1_2:-72485957 None:intergenic
TTCTGTTATAGTACCAACTC+AGG 0.592503 1_2:+72494165 Msa0090440:CDS
TCTACAAGAAGACCATATCA+AGG 0.594214 1_2:+72487183 Msa0090440:CDS
GCCTTCTCTGATTAAAGCTG+AGG 0.594967 1_2:+72492453 Msa0090440:CDS
GTCGAGGCAGAAGGCTCTCG+AGG 0.595838 1_2:+72487066 Msa0090440:CDS
ATAACAGAAGCCTCCGAGGT+AGG 0.595977 1_2:-72494151 None:intergenic
TCAACATTCGTGTCATCAGT+AGG 0.595995 1_2:-72487895 None:intergenic
ATTATACATTAAAGTAGATG+TGG 0.597400 1_2:+72487393 Msa0090440:CDS
AGTTGCAAAGGTCAAGGTCG+AGG 0.597929 1_2:+72487050 Msa0090440:CDS
TTGATCTCTTCCAGTATAGA+CGG 0.598405 1_2:+72487349 Msa0090440:CDS
ACTTTGCTAGTGACACTACT+GGG 0.599022 1_2:-72487030 None:intergenic
ATGATGTCAGCACCGGAGGG+TGG 0.600159 1_2:-72486014 None:intergenic
TTTAATGTCAGCATTACGCT+TGG 0.600229 1_2:-72492479 None:intergenic
AATATCAGCTAGTAGTCCCC+TGG 0.600234 1_2:-72491618 None:intergenic
TTACTAGTCAAACAAAAGAA+GGG 0.600478 1_2:+72487323 Msa0090440:CDS
ACAGTGCAAAAGCATCCAAA+CGG 0.601917 1_2:+72487095 Msa0090440:CDS
GCATTGTTGACCGAGCAATC+CGG 0.602170 1_2:-72486914 None:intergenic
ATCAGGGGAAAGCCTTAAGA+CGG 0.602213 1_2:-72487602 None:intergenic
TTGATTTGAAAGAAGGACGC+CGG 0.602654 1_2:+72487701 Msa0090440:CDS
GGCGAAGAGACCAATAGGGA+TGG 0.603033 1_2:+72487667 Msa0090440:CDS
TCCTCCAGAATTGGATTCAG+GGG 0.604071 1_2:+72486955 Msa0090440:CDS
GGCGGGGTCATGGCATCTTG+AGG 0.604648 1_2:+72490953 Msa0090440:CDS
GTTATTGGCTGAATCGCTGA+TGG 0.606293 1_2:-72492912 None:intergenic
TCAGGAGATGGTGATAATGC+TGG 0.606634 1_2:+72487121 Msa0090440:CDS
ATCTCTTCCAGTATAGACGG+TGG 0.607784 1_2:+72487352 Msa0090440:CDS
AGTCTTGACCCCAAACAAGA+AGG 0.608674 1_2:-72487544 None:intergenic
TAGCAAAGTTGCAAAGGTCA+AGG 0.609221 1_2:+72487044 Msa0090440:CDS
GAGTTTCAACCCAACAGCCA+AGG 0.609684 1_2:+72487223 Msa0090440:CDS
AAGCGAATGAGCAAAAGAAG+AGG 0.610436 1_2:+72492500 Msa0090440:CDS
TTACCTAATGGACTTCTGGA+GGG 0.611690 1_2:+72491335 Msa0090440:CDS
GGATCTGAGTGAGTGAGCCA+TGG 0.615575 1_2:-72486186 None:intergenic
CTGCAAGAGCATAATAGACA+AGG 0.618186 1_2:+72492854 Msa0090440:CDS
TGTCACTAGCAAAGTTGCAA+AGG 0.618308 1_2:+72487038 Msa0090440:CDS
CATGCTCTCAGCATAAGAGA+AGG 0.620047 1_2:+72488073 Msa0090440:CDS
CATGCTCTCAGCATAAGAGA+AGG 0.620047 1_2:+72488595 Msa0090440:CDS
ATCGACGCTGTGAACAATGT+CGG 0.622705 1_2:+72486035 Msa0090440:exon
CTTCCTAAACTCATCCTCAA+CGG 0.622905 1_2:+72486150 Msa0090440:CDS
CGAATGTGCCAATAAAGGAA+AGG 0.623218 1_2:+72492976 Msa0090440:CDS
TCTGTGCTCGGCATTATCAG+TGG 0.626280 1_2:-72487464 None:intergenic
TAGTTGATTCCATTGACCAA+AGG 0.627809 1_2:+72488154 Msa0090440:CDS
TAGTTGATTCCATTGACCAA+AGG 0.627809 1_2:+72488676 Msa0090440:CDS
GCCCCTGAATCCAATTCTGG+AGG 0.629704 1_2:-72486956 None:intergenic
TGACTCAATGAGGTTCAGCA+TGG 0.631418 1_2:+72490923 Msa0090440:CDS
TCAAGTAGAAGAATCAATCC+CGG 0.632827 1_2:+72491029 Msa0090440:CDS
GAATGAGCAAAAGAAGAGGA+AGG 0.633939 1_2:+72492504 Msa0090440:CDS
ATTGACCAAAGGCCTGCAAG+TGG 0.633998 1_2:+72488165 Msa0090440:CDS
GGTGATACTGAATTCTCAGA+CGG 0.634543 1_2:+72491053 Msa0090440:CDS
CTCTCAGCATAAGAGAAGGA+AGG 0.636251 1_2:+72488077 Msa0090440:CDS
CTCTCAGCATAAGAGAAGGA+AGG 0.636251 1_2:+72488599 Msa0090440:CDS
TGCCAACACTAAGGTTAGGG+AGG 0.636910 1_2:+72487573 Msa0090440:CDS
TCTCTTCCAGTATAGACGGT+GGG 0.637069 1_2:+72487353 Msa0090440:CDS
AGTTGCAGCAGATCTGTGCT+CGG 0.638703 1_2:-72487476 None:intergenic
TTATAGTTCTCCTACCTCGG+AGG 0.639586 1_2:+72494141 Msa0090440:intron
AGATGTGATGGAAGATACCA+AGG 0.643125 1_2:+72488818 Msa0090440:CDS
AGCGTCGATGATGTCAGCAC+CGG 0.645651 1_2:-72486021 None:intergenic
ACATTTGGCACATGATCAGG+CGG 0.645866 1_2:+72488758 Msa0090440:CDS
TTGGTGCTTCTAGAAATACA+AGG 0.646683 1_2:+72487296 Msa0090440:CDS
ACTTCGTTCAGATCTTCGAT+CGG 0.648458 1_2:+72486070 Msa0090440:CDS
CTCACTCACTCAGATCCCAA+AGG 0.649468 1_2:+72486192 Msa0090440:CDS
TCTGAGTGAGTGAGCCATGG+AGG 0.649704 1_2:-72486183 None:intergenic
TTCAGCCAATAACATAACCA+AGG 0.650099 1_2:+72492922 Msa0090440:CDS
GAGTCAATACTAAAACTGAA+GGG 0.653080 1_2:-72490906 None:intergenic
TACTATAACAGAAGCCTCCG+AGG 0.657782 1_2:-72494155 None:intergenic
TCGATGATGTCAGCACCGGA+GGG 0.662758 1_2:-72486017 None:intergenic
AATGGTTCTGACAAAGCCGG+CGG 0.664360 1_2:-72487745 None:intergenic
AATGGTTCTGACAAAGCCGG+CGG 0.664360 1_2:-72488267 None:intergenic
GAGGAGGAGGAATTCCGTTG+AGG 0.670450 1_2:-72486164 None:intergenic
CAGTACGTAAAAGATCCAGT+AGG 0.686519 1_2:+72491879 Msa0090440:CDS
TGGTGCTTCTAGAAATACAA+GGG 0.689413 1_2:+72487297 Msa0090440:CDS
CACAGACACAGCGAAATCAG+GGG 0.690639 1_2:-72487617 None:intergenic
TGGTCTTCTTGTAGAGACGG+CGG 0.691093 1_2:-72487175 None:intergenic
TATCAAAGAAGACAATCCTG+AGG 0.716960 1_2:+72488719 Msa0090440:CDS
TTGGTTCAGAAGGAATAACA+AGG 0.722967 1_2:+72491588 Msa0090440:CDS
ATAACAAGGTCAATTGCCAG+GGG 0.734613 1_2:+72491602 Msa0090440:CDS
TATCAAAGAAGACAATCCCG+AGG 0.745065 1_2:+72488197 Msa0090440:CDS
AGTAGAAGAATCAATCCCGG+AGG 0.770052 1_2:+72491032 Msa0090440:CDS
GATGATATAGGAGATCAACA+TGG 0.784239 1_2:+72488780 Msa0090440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTGTTTTTCTAATATA+TGG + chr1_2:72492155-72492174 Msa0090440:intron 10.0%
!!! AATTTGTTTTTCTAATATAT+GGG + chr1_2:72492156-72492175 Msa0090440:intron 10.0%
!! ACAAAATAATAAAGAAATTT+CGG + chr1_2:72493911-72493930 Msa0090440:intron 10.0%
!!! CTTTTTATTTTTATAACTTG+TGG - chr1_2:72489151-72489170 None:intergenic 15.0%
!!! ATTACTAGAGTTTTTATTTA+AGG - chr1_2:72489798-72489817 None:intergenic 15.0%
!! TACTATATTTCAATACAAAA+GGG - chr1_2:72490040-72490059 None:intergenic 15.0%
!!! ATTTTGAATAATAAAAGTTG+AGG + chr1_2:72490549-72490568 Msa0090440:intron 15.0%
!!! GGTTTCTTTTTTATTTTATT+GGG - chr1_2:72491770-72491789 None:intergenic 15.0%
!!! AGGTTTCTTTTTTATTTTAT+TGG - chr1_2:72491771-72491790 None:intergenic 15.0%
!! TGAGATTTAAATATCTTTAT+AGG + chr1_2:72493462-72493481 Msa0090440:intron 15.0%
!!! TTTTGCACAATTAATATTAT+TGG - chr1_2:72493831-72493850 None:intergenic 15.0%
!! TAATATTAATTGTGCAAAAT+AGG + chr1_2:72493832-72493851 Msa0090440:intron 15.0%
!!! AAATTTAATTTTTGGAACGT+TGG - chr1_2:72485937-72485956 None:intergenic 20.0%
!!! ATTTGGGGAAATTTAATTTT+TGG - chr1_2:72485945-72485964 None:intergenic 20.0%
!! TAACAGAAAATAATAACAGT+TGG - chr1_2:72486375-72486394 None:intergenic 20.0%
!!! TTTAATTTTCAGTTACGATA+TGG + chr1_2:72486494-72486513 Msa0090440:intron 20.0%
!! AAAAAGATGTATAACAAATC+AGG - chr1_2:72486684-72486703 None:intergenic 20.0%
!! ATTATACATTAAAGTAGATG+TGG + chr1_2:72487393-72487412 Msa0090440:CDS 20.0%
!! ATTATTAGTAAAACTATCTG+TGG - chr1_2:72488043-72488062 None:intergenic 20.0%
!!! AGATAGTTTTACTAATAATG+TGG + chr1_2:72488044-72488063 Msa0090440:CDS 20.0%
!!! CTGTGGAATTTTTAAAATTA+TGG - chr1_2:72488548-72488567 None:intergenic 20.0%
!! TGATCATAATAAAGTAAATC+TGG - chr1_2:72489089-72489108 None:intergenic 20.0%
!! ATTGCTTCTATATTTGATTA+AGG - chr1_2:72489359-72489378 None:intergenic 20.0%
!! ACAGTGAAAATGAAATAAAT+AGG + chr1_2:72489712-72489731 Msa0090440:intron 20.0%
!! GATTTATTCTTCATTTCTAT+TGG - chr1_2:72489759-72489778 None:intergenic 20.0%
!!! GTTTTTATTTAAGGCTTTAT+TGG - chr1_2:72489789-72489808 None:intergenic 20.0%
!!! TTTATTTTTCTTCCAACTTT+TGG + chr1_2:72489926-72489945 Msa0090440:intron 20.0%
!! CTACTATATTTCAATACAAA+AGG - chr1_2:72490041-72490060 None:intergenic 20.0%
!! TATACTCAAAACTATAGTAA+TGG + chr1_2:72490087-72490106 Msa0090440:intron 20.0%
!! TTCAATTTGTCTGTATTAAA+AGG + chr1_2:72490363-72490382 Msa0090440:intron 20.0%
!!! TAGTTTCTAAAGTTATTGTT+TGG + chr1_2:72490491-72490510 Msa0090440:intron 20.0%
!!! AGTTTCTAAAGTTATTGTTT+GGG + chr1_2:72490492-72490511 Msa0090440:intron 20.0%
!! ATATATAAATTAATACGTGC+AGG + chr1_2:72490743-72490762 Msa0090440:intron 20.0%
!!! TACAATCTTTATTTTTGACT+CGG - chr1_2:72491654-72491673 None:intergenic 20.0%
!!! TTTGTATTTCTATGTTAAGA+TGG - chr1_2:72492365-72492384 None:intergenic 20.0%
!! AGCTAAAGAAAAAAAACAAA+GGG + chr1_2:72492576-72492595 Msa0090440:CDS 20.0%
!!! AACAATTTTATTGACAAAAG+AGG - chr1_2:72492711-72492730 None:intergenic 20.0%
!! TTATCTTTAACAATCATACT+TGG + chr1_2:72493029-72493048 Msa0090440:intron 20.0%
!!! ATTCTTTAATATGTGTCATT+TGG + chr1_2:72493422-72493441 Msa0090440:intron 20.0%
!! AAGATATTTAAATCTCACAA+TGG - chr1_2:72493459-72493478 None:intergenic 20.0%
!!! TTTTAATTCAAACTGTAACA+AGG + chr1_2:72493761-72493780 Msa0090440:intron 20.0%
!!! CAAAAAAGTTTTTAGGTAAA+TGG - chr1_2:72493942-72493961 None:intergenic 20.0%
!!! CATTTACCTAAAAACTTTTT+TGG + chr1_2:72493940-72493959 Msa0090440:intron 20.0%
! CATTTCGAATTTCAAATTTG+GGG - chr1_2:72485960-72485979 None:intergenic 25.0%
! GCATTTCGAATTTCAAATTT+GGG - chr1_2:72485961-72485980 None:intergenic 25.0%
!! TGCAATTTTCATTTCGTTTT+AGG + chr1_2:72486301-72486320 Msa0090440:intron 25.0%
! TACATGCATTATAGTGATAT+TGG + chr1_2:72486336-72486355 Msa0090440:intron 25.0%
!! TTTGAAAATCTGAAATCTAG+TGG + chr1_2:72486439-72486458 Msa0090440:intron 25.0%
! ATAATAATAATCAGCCACTA+TGG - chr1_2:72486571-72486590 None:intergenic 25.0%
!!! GAAGATTAATTTGCACAATA+AGG + chr1_2:72486594-72486613 Msa0090440:intron 25.0%
!!! TTTTAAAAATGACGGTGATA+CGG + chr1_2:72486871-72486890 Msa0090440:CDS 25.0%
! TTACTAGTCAAACAAAAGAA+GGG + chr1_2:72487323-72487342 Msa0090440:CDS 25.0%
! ATCAAAATCAAGATGAACTT+TGG - chr1_2:72487506-72487525 None:intergenic 25.0%
!! AAAGTTCATCTTGATTTTGA+TGG + chr1_2:72487505-72487524 Msa0090440:CDS 25.0%
! ATTATTCGTAAAACTATCTG+TGG - chr1_2:72488565-72488584 None:intergenic 25.0%
!!! AGATAGTTTTACGAATAATG+TGG + chr1_2:72488566-72488585 Msa0090440:CDS 25.0%
! TTAATATCAAATTGTACGTC+TGG + chr1_2:72489005-72489024 Msa0090440:intron 25.0%
! TAATATCAAATTGTACGTCT+GGG + chr1_2:72489006-72489025 Msa0090440:intron 25.0%
! ATCCTTGCAAATATTTCAAA+TGG - chr1_2:72489190-72489209 None:intergenic 25.0%
!! TTTTCAACTAGTACAAAACA+AGG - chr1_2:72489304-72489323 None:intergenic 25.0%
! AACTCAAAAATTGTATTGGA+GGG + chr1_2:72489476-72489495 Msa0090440:intron 25.0%
! GTGAGAAATATATAGAGAAA+TGG - chr1_2:72489633-72489652 None:intergenic 25.0%
!!! TAAATACTAAGGCTTTGTTT+GGG - chr1_2:72489681-72489700 None:intergenic 25.0%
!!! ATAAATACTAAGGCTTTGTT+TGG - chr1_2:72489682-72489701 None:intergenic 25.0%
! CCTCTATTACATAAATACTA+AGG - chr1_2:72489692-72489711 None:intergenic 25.0%
! CCTTAGTATTTATGTAATAG+AGG + chr1_2:72489689-72489708 Msa0090440:intron 25.0%
! TTCTTCATTTCTATTGGAAT+CGG - chr1_2:72489753-72489772 None:intergenic 25.0%
!!! TAAAATGTGTTGTTTACTCT+CGG - chr1_2:72489974-72489993 None:intergenic 25.0%
!!! ATTTTAAAGCAATTGAGCAA+GGG + chr1_2:72489988-72490007 Msa0090440:intron 25.0%
!!! ATTTCTTTTGAGAAATGAAG+AGG + chr1_2:72490118-72490137 Msa0090440:intron 25.0%
!!! GTTTCTAAAGTTATTGTTTG+GGG + chr1_2:72490493-72490512 Msa0090440:intron 25.0%
! AAATTCTATCAATGTTCAGT+TGG - chr1_2:72490700-72490719 None:intergenic 25.0%
! TTACGAGATTTGAATTTGAT+TGG + chr1_2:72491095-72491114 Msa0090440:CDS 25.0%
!! GATCGATTTAATTCGAATTT+CGG + chr1_2:72491467-72491486 Msa0090440:CDS 25.0%
! TCCAGTAAATCAAATTTATC+TGG + chr1_2:72491980-72491999 Msa0090440:CDS 25.0%
!! TCCAGATAAATTTGATTTAC+TGG - chr1_2:72491984-72492003 None:intergenic 25.0%
!! ACTCATTGTTGTTACATAAA+AGG - chr1_2:72492333-72492352 None:intergenic 25.0%
! CAGCTAAAGAAAAAAAACAA+AGG + chr1_2:72492575-72492594 Msa0090440:CDS 25.0%
! AAAAGGAGAAAGATAGAAAA+AGG + chr1_2:72492611-72492630 Msa0090440:CDS 25.0%
!!! TCTCTTTTGATTTTGTGAAA+AGG + chr1_2:72492743-72492762 Msa0090440:intron 25.0%
!! AGGCTAATATATAGATTTTC+TGG + chr1_2:72492763-72492782 Msa0090440:intron 25.0%
!!! ATATATAGATTTTCTGGTCT+AGG + chr1_2:72492769-72492788 Msa0090440:intron 25.0%
!!! TATATAGATTTTCTGGTCTA+GGG + chr1_2:72492770-72492789 Msa0090440:intron 25.0%
!! TCATTTTACCTTTCCTTTAT+TGG - chr1_2:72492987-72493006 None:intergenic 25.0%
!! GCAATTAAAACAAAAAGCAT+TGG - chr1_2:72493168-72493187 None:intergenic 25.0%
! TATAAATACTAGGAAACAGT+TGG - chr1_2:72493213-72493232 None:intergenic 25.0%
!!! TTATCCACTTTTGTTTTTGA+AGG + chr1_2:72493265-72493284 Msa0090440:intron 25.0%
! ATATCCTTCAAAAACAAAAG+TGG - chr1_2:72493272-72493291 None:intergenic 25.0%
! TATTCTTTACAATGATCTTC+TGG + chr1_2:72493391-72493410 Msa0090440:intron 25.0%
! AAATCTCACAATGGTTATAA+AGG - chr1_2:72493450-72493469 None:intergenic 25.0%
! AATATCTTTATAGGCGAAAA+TGG + chr1_2:72493471-72493490 Msa0090440:intron 25.0%
! GTACCCATTTAATAATGTTA+TGG + chr1_2:72493672-72493691 Msa0090440:intron 25.0%
! GCACCATAACATTATTAAAT+GGG - chr1_2:72493678-72493697 None:intergenic 25.0%
!!! AAAGCTTTAAAAGCAATATG+TGG + chr1_2:72493799-72493818 Msa0090440:intron 25.0%
!! AAGCAACCAAAAAAGTTTTT+AGG - chr1_2:72493949-72493968 None:intergenic 25.0%
! GAACTATAAAAGAATGCAAT+TGG - chr1_2:72494130-72494149 None:intergenic 25.0%
CGCATTTCGAATTTCAAATT+TGG - chr1_2:72485962-72485981 None:intergenic 30.0%
GGTTTACAGTGAAATTATGA+GGG + chr1_2:72486272-72486291 Msa0090440:intron 30.0%
TTGCACAATAAGGTTTAGTA+AGG + chr1_2:72486604-72486623 Msa0090440:intron 30.0%
CAAATTTCCCAACGTAAAAT+CGG - chr1_2:72486659-72486678 None:intergenic 30.0%
TTACTATCACGAACACAATT+TGG + chr1_2:72486749-72486768 Msa0090440:CDS 30.0%
!! GTCTGTGCTTTTAAAAATGA+CGG + chr1_2:72486863-72486882 Msa0090440:CDS 30.0%
TTTAAAAATGACGGTGATAC+GGG + chr1_2:72486872-72486891 Msa0090440:CDS 30.0%
GTTACTAGTCAAACAAAAGA+AGG + chr1_2:72487322-72487341 Msa0090440:CDS 30.0%
! CATCAGATGCTATATTTTCT+TGG - chr1_2:72487438-72487457 None:intergenic 30.0%
TCATCAAAAACAAGTTGCTT+AGG - chr1_2:72487646-72487665 None:intergenic 30.0%
!!! AAGCAACTTGTTTTTGATGA+CGG + chr1_2:72487646-72487665 Msa0090440:CDS 30.0%
! AATAGCCTTGATTTGAAAGA+AGG + chr1_2:72487694-72487713 Msa0090440:CDS 30.0%
CTGTGGAACTTATGAAATTA+TGG - chr1_2:72488026-72488045 None:intergenic 30.0%
! TGATGACACAAATGTTGATT+TGG + chr1_2:72488422-72488441 Msa0090440:CDS 30.0%
ATTGTCTTCTTTGATACTTG+AGG - chr1_2:72488715-72488734 None:intergenic 30.0%
TGTCATTGAAGTTCAACATT+TGG + chr1_2:72488743-72488762 Msa0090440:CDS 30.0%
TACCAAGGAAAGTCAAAAAA+TGG + chr1_2:72488833-72488852 Msa0090440:CDS 30.0%
!!! TTCCATTTTTTGACTTTCCT+TGG - chr1_2:72488838-72488857 None:intergenic 30.0%
AAGGAAAGTCAAAAAATGGA+AGG + chr1_2:72488837-72488856 Msa0090440:CDS 30.0%
AGGAAAGTCAAAAAATGGAA+GGG + chr1_2:72488838-72488857 Msa0090440:CDS 30.0%
AGTTAAAGTGAGAAAAGAAG+AGG + chr1_2:72488866-72488885 Msa0090440:CDS 30.0%
GGACAATTCATATCTACTTT+GGG - chr1_2:72488947-72488966 None:intergenic 30.0%
! CTCCATTTGAAATATTTGCA+AGG + chr1_2:72489185-72489204 Msa0090440:intron 30.0%
!! TGTAGACTGAGTTTTAATCT+TGG - chr1_2:72489266-72489285 None:intergenic 30.0%
CAAATATAGAAGCAATACCT+AGG + chr1_2:72489363-72489382 Msa0090440:intron 30.0%
AGGGAACTCAAAAATTGTAT+TGG + chr1_2:72489472-72489491 Msa0090440:intron 30.0%
GAACTCAAAAATTGTATTGG+AGG + chr1_2:72489475-72489494 Msa0090440:intron 30.0%
!! TTAAGGCTTTATTGGCTTTA+AGG - chr1_2:72489781-72489800 None:intergenic 30.0%
!!! CATTTTAAAGCAATTGAGCA+AGG + chr1_2:72489987-72490006 Msa0090440:intron 30.0%
!!! TTTTAAAGCAATTGAGCAAG+GGG + chr1_2:72489989-72490008 Msa0090440:intron 30.0%
TCATTTCTATTAACCAACTG+AGG - chr1_2:72490206-72490225 None:intergenic 30.0%
ATGCAAGCTGGTATTAATTT+AGG + chr1_2:72490253-72490272 Msa0090440:intron 30.0%
AAGTGTCACAATTTATGACA+AGG - chr1_2:72490415-72490434 None:intergenic 30.0%
AATCAGACAGTTTCATTATC+AGG + chr1_2:72490467-72490486 Msa0090440:intron 30.0%
ATTATTCAAAATCCAGCTCA+TGG - chr1_2:72490541-72490560 None:intergenic 30.0%
!!! AATATCTGCCAAGTTTTTTC+TGG + chr1_2:72490617-72490636 Msa0090440:intron 30.0%
TTATATATTCGTTGCAGAGT+AGG - chr1_2:72490731-72490750 None:intergenic 30.0%
CTCAGACAAATCAAGTAAAA+TGG - chr1_2:72490793-72490812 None:intergenic 30.0%
CAATATAAGTTTCTGCTAAC+AGG - chr1_2:72490838-72490857 None:intergenic 30.0%
CTGTTAGCAGAAACTTATAT+TGG + chr1_2:72490836-72490855 Msa0090440:intron 30.0%
TAGCAGAAACTTATATTGGA+TGG + chr1_2:72490840-72490859 Msa0090440:intron 30.0%
AAACTTATATTGGATGGAAG+AGG + chr1_2:72490846-72490865 Msa0090440:CDS 30.0%
TGAGTCAATACTAAAACTGA+AGG - chr1_2:72490910-72490929 None:intergenic 30.0%
!!! GTTTTAGTATTGACTCAATG+AGG + chr1_2:72490913-72490932 Msa0090440:CDS 30.0%
AAATTCAAATCTCGTAATCC+TGG - chr1_2:72491092-72491111 None:intergenic 30.0%
GATTTGAATTTGATTGGTAC+AGG + chr1_2:72491101-72491120 Msa0090440:CDS 30.0%
CATTAGGTAAAGACTGATAA+AGG - chr1_2:72491325-72491344 None:intergenic 30.0%
CTTTATCAGTCTTTACCTAA+TGG + chr1_2:72491323-72491342 Msa0090440:CDS 30.0%
! TCATTTTCTTCACTAATGCA+GGG - chr1_2:72491530-72491549 None:intergenic 30.0%
! TTCATTTTCTTCACTAATGC+AGG - chr1_2:72491531-72491550 None:intergenic 30.0%
CTTGTAAAACTGATGTTGAA+GGG - chr1_2:72491688-72491707 None:intergenic 30.0%
TCTTGTAAAACTGATGTTGA+AGG - chr1_2:72491689-72491708 None:intergenic 30.0%
! AGCTCAGAATTTAACTTTGA+CGG + chr1_2:72491740-72491759 Msa0090440:CDS 30.0%
TGGGATAAGATTTGCAAATA+AGG + chr1_2:72491808-72491827 Msa0090440:CDS 30.0%
GGGATAAGATTTGCAAATAA+GGG + chr1_2:72491809-72491828 Msa0090440:CDS 30.0%
GGATAAGATTTGCAAATAAG+GGG + chr1_2:72491810-72491829 Msa0090440:CDS 30.0%
! GAAAACAAGAGTGTAGTAAA+TGG + chr1_2:72491836-72491855 Msa0090440:CDS 30.0%
AGTATGAAAGATCCAGTAAA+TGG + chr1_2:72491923-72491942 Msa0090440:CDS 30.0%
TGGAATAAAGGAAGTAAGAT+TGG - chr1_2:72492074-72492093 None:intergenic 30.0%
! ACATTTATCTGGTGGAATTT+TGG - chr1_2:72492227-72492246 None:intergenic 30.0%
AAAATTCCACCAGATAAATG+TGG + chr1_2:72492226-72492245 Msa0090440:intron 30.0%
AAATTCCACCAGATAAATGT+GGG + chr1_2:72492227-72492246 Msa0090440:intron 30.0%
!! TAAGCAATTTTTGAAAGCCA+TGG - chr1_2:72492259-72492278 None:intergenic 30.0%
TGGCTTTCAAAAATTGCTTA+TGG + chr1_2:72492259-72492278 Msa0090440:intron 30.0%
CTTTCAAAAATTGCTTATGG+CGG + chr1_2:72492262-72492281 Msa0090440:intron 30.0%
TGTTGTTACATAAAAGGTCA+GGG - chr1_2:72492327-72492346 None:intergenic 30.0%
! TTGTTGTTACATAAAAGGTC+AGG - chr1_2:72492328-72492347 None:intergenic 30.0%
AAGGGAAATTGAAGAGAAAA+AGG + chr1_2:72492594-72492613 Msa0090440:CDS 30.0%
! CTATAATTTTCCTGCTTTCA+TGG - chr1_2:72492805-72492824 None:intergenic 30.0%
GAAAGCAGGAAAATTATAGA+AGG + chr1_2:72492806-72492825 Msa0090440:CDS 30.0%
CTTTAACAATCATACTTGGA+AGG + chr1_2:72493033-72493052 Msa0090440:intron 30.0%
AAGAACTTCTTGTATAGAAC+TGG - chr1_2:72493098-72493117 None:intergenic 30.0%
! TTCTTTTCTTCTAACAATGC+AGG + chr1_2:72493113-72493132 Msa0090440:intron 30.0%
TGTTGAGCACTATAAATACT+AGG - chr1_2:72493223-72493242 None:intergenic 30.0%
AGTGCTCAACAATTATTTGA+AGG + chr1_2:72493232-72493251 Msa0090440:intron 30.0%
GTGCTCAACAATTATTTGAA+GGG + chr1_2:72493233-72493252 Msa0090440:intron 30.0%
AAGGATATGATTTATCCACT+TGG + chr1_2:72493284-72493303 Msa0090440:intron 30.0%
TTAAACAGTTTAACACCAAG+TGG - chr1_2:72493302-72493321 None:intergenic 30.0%
TTACACGAGAGAATTATGTT+TGG - chr1_2:72493325-72493344 None:intergenic 30.0%
TCATCATCATCTGATCTATA+TGG - chr1_2:72493574-72493593 None:intergenic 30.0%
!! GATGGCATAAACTTGTTATT+TGG - chr1_2:72493613-72493632 None:intergenic 30.0%
ATAACAAGTTTATGCCATCA+TGG + chr1_2:72493614-72493633 Msa0090440:CDS 30.0%
TAACAAGTTTATGCCATCAT+GGG + chr1_2:72493615-72493634 Msa0090440:CDS 30.0%
GGCACCATAACATTATTAAA+TGG - chr1_2:72493679-72493698 None:intergenic 30.0%
! CTTCTCTCAATGTGATTTTT+GGG + chr1_2:72493698-72493717 Msa0090440:intron 30.0%
! CTTTAAAAGCAATATGTGGT+TGG + chr1_2:72493803-72493822 Msa0090440:intron 30.0%
CAAGCAATAGTAAATCTATC+TGG - chr1_2:72493888-72493907 None:intergenic 30.0%
! GATTATTTCTTCCCAGAAAA+TGG + chr1_2:72493994-72494013 Msa0090440:intron 30.0%
! AGTTTTTGCGATATTGCAAA+AGG + chr1_2:72494043-72494062 Msa0090440:intron 30.0%
TTCCATGCATTTCACAATAA+GGG + chr1_2:72494207-72494226 Msa0090440:CDS 30.0%
! CAATAAGGGATTTTGTGTTA+AGG + chr1_2:72494221-72494240 Msa0090440:CDS 30.0%
! TTCACTTGTTAGCAGGAATT+AGG + chr1_2:72486250-72486269 Msa0090440:intron 35.0%
! TCACTTGTTAGCAGGAATTA+GGG + chr1_2:72486251-72486270 Msa0090440:intron 35.0%
GGGTTTACAGTGAAATTATG+AGG + chr1_2:72486271-72486290 Msa0090440:intron 35.0%
AGATCCTTGATTCTGTTAAG+TGG + chr1_2:72486394-72486413 Msa0090440:intron 35.0%
GAATCTGTCAAATACCATAG+TGG + chr1_2:72486554-72486573 Msa0090440:intron 35.0%
!! ATTCTAAGCCGATTTTACGT+TGG + chr1_2:72486648-72486667 Msa0090440:intron 35.0%
!! TTCTAAGCCGATTTTACGTT+GGG + chr1_2:72486649-72486668 Msa0090440:intron 35.0%
! CAATTTGGAATTCCTTTCAC+TGG + chr1_2:72486764-72486783 Msa0090440:CDS 35.0%
ACTTCATTGCGTAAATCAAC+AGG - chr1_2:72486845-72486864 None:intergenic 35.0%
TTAAAAATGACGGTGATACG+GGG + chr1_2:72486873-72486892 Msa0090440:CDS 35.0%
!! TATCTGATTCTGAGGTGAAA+TGG - chr1_2:72486981-72487000 None:intergenic 35.0%
ATATGGTCTTCTTGTAGAGA+CGG - chr1_2:72487181-72487200 None:intergenic 35.0%
TCTACAAGAAGACCATATCA+AGG + chr1_2:72487183-72487202 Msa0090440:CDS 35.0%
CCAAGCTTAAATCCTTGATA+TGG - chr1_2:72487198-72487217 None:intergenic 35.0%
CCATATCAAGGATTTAAGCT+TGG + chr1_2:72487195-72487214 Msa0090440:CDS 35.0%
! TTGGTGCTTCTAGAAATACA+AGG + chr1_2:72487296-72487315 Msa0090440:CDS 35.0%
! TGGTGCTTCTAGAAATACAA+GGG + chr1_2:72487297-72487316 Msa0090440:CDS 35.0%
TTGATCTCTTCCAGTATAGA+CGG + chr1_2:72487349-72487368 Msa0090440:CDS 35.0%
TAAAGTAGATGTGGCTGAAA+AGG + chr1_2:72487402-72487421 Msa0090440:CDS 35.0%
! TGATAACGAACCTTCTTGTT+TGG + chr1_2:72487534-72487553 Msa0090440:CDS 35.0%
! GATAACGAACCTTCTTGTTT+GGG + chr1_2:72487535-72487554 Msa0090440:CDS 35.0%
! ATAACGAACCTTCTTGTTTG+GGG + chr1_2:72487536-72487555 Msa0090440:CDS 35.0%
GCTATTTATTCCATCCCTAT+TGG - chr1_2:72487680-72487699 None:intergenic 35.0%
ATGTCATCGAGTAACTTCAA+TGG - chr1_2:72487766-72487785 None:intergenic 35.0%
! TCTGAAGCAGTTACTGAAAA+TGG + chr1_2:72487811-72487830 Msa0090440:CDS 35.0%
! TTTAACGCTAGGTTTTCATC+TGG + chr1_2:72487868-72487887 Msa0090440:CDS 35.0%
! TGATGACACGAATGTTGATT+TGG + chr1_2:72487900-72487919 Msa0090440:CDS 35.0%
!! AATAAGTCACCATTTTGACC+CGG - chr1_2:72487952-72487971 None:intergenic 35.0%
! TAGTTGATTCCATTGACCAA+AGG + chr1_2:72488154-72488173 Msa0090440:CDS 35.0%
ATTGTCTTCTTTGATACTCG+AGG - chr1_2:72488193-72488212 None:intergenic 35.0%
! CTTTATTTGGTGACATTCTC+CGG - chr1_2:72488245-72488264 None:intergenic 35.0%
ATGTCATCGAGTAACTTCAA+TGG - chr1_2:72487766-72487785 None:intergenic 35.0%
! TCTGAAGCAGTTACTGAAAA+TGG + chr1_2:72487811-72487830 Msa0090440:CDS 35.0%
! TTTAACGCTAGTTTCTCATC+TGG + chr1_2:72488390-72488409 Msa0090440:CDS 35.0%
TCAACATTTGTGTCATCAGT+AGG - chr1_2:72488420-72488439 None:intergenic 35.0%
!! AAATGTTGATTTGGCACAAC+AGG + chr1_2:72488431-72488450 Msa0090440:CDS 35.0%
! TAGTTGATTCCATTGACCAA+AGG + chr1_2:72488154-72488173 Msa0090440:CDS 35.0%
TATCAAAGAAGACAATCCTG+AGG + chr1_2:72488719-72488738 Msa0090440:CDS 35.0%
GATGATATAGGAGATCAACA+TGG + chr1_2:72488780-72488799 Msa0090440:CDS 35.0%
TATCTTCCATCACATCTGTT+GGG - chr1_2:72488815-72488834 None:intergenic 35.0%
CGGACAATTCATATCTACTT+TGG - chr1_2:72488948-72488967 None:intergenic 35.0%
CTCTGTTATCGCAAGATATA+CGG - chr1_2:72488968-72488987 None:intergenic 35.0%
ATATCTTGCGATAACAGAGT+TGG + chr1_2:72488969-72488988 Msa0090440:intron 35.0%
AAACTGCATGACAATTACAG+CGG - chr1_2:72489052-72489071 None:intergenic 35.0%
! CTGTAATTGTCATGCAGTTT+TGG + chr1_2:72489052-72489071 Msa0090440:intron 35.0%
AAGTAAATCTGGCAATGTCT+CGG - chr1_2:72489078-72489097 None:intergenic 35.0%
TCTTGGATTCTCTAGTAACT+GGG - chr1_2:72489249-72489268 None:intergenic 35.0%
ATCTTGGATTCTCTAGTAAC+TGG - chr1_2:72489250-72489269 None:intergenic 35.0%
AACTCAGTCTACATACATTG+TGG + chr1_2:72489273-72489292 Msa0090440:intron 35.0%
AACTAGTACAAAACAAGGCT+AGG - chr1_2:72489299-72489318 None:intergenic 35.0%
!!! TTTTGAGTTCCCTGAAATGA+GGG - chr1_2:72489465-72489484 None:intergenic 35.0%
!!! TTTTTGAGTTCCCTGAAATG+AGG - chr1_2:72489466-72489485 None:intergenic 35.0%
AAACTCTAGTAATCCCATCT+AGG + chr1_2:72489805-72489824 Msa0090440:intron 35.0%
AACTCTAGTAATCCCATCTA+GGG + chr1_2:72489806-72489825 Msa0090440:intron 35.0%
!! CTGTTGTTTCCCAATAACTT+CGG + chr1_2:72489845-72489864 Msa0090440:intron 35.0%
ATTTGCTTGCCGAAGTTATT+GGG - chr1_2:72489857-72489876 None:intergenic 35.0%
! AATTTGCTTGCCGAAGTTAT+TGG - chr1_2:72489858-72489877 None:intergenic 35.0%
!! CTGTCTGATTTTAGAAGAGA+TGG - chr1_2:72490457-72490476 None:intergenic 35.0%
CATGGAAAATAGTCTTTCAC+TGG - chr1_2:72490523-72490542 None:intergenic 35.0%
! AAAGACTATTTTCCATGAGC+TGG + chr1_2:72490526-72490545 Msa0090440:intron 35.0%
ATAGAGAGCCAGAAAAAACT+TGG - chr1_2:72490628-72490647 None:intergenic 35.0%
ATTTGCTTCTGGCAACATAA+GGG - chr1_2:72490886-72490905 None:intergenic 35.0%
TCAAGTAGAAGAATCAATCC+CGG + chr1_2:72491029-72491048 Msa0090440:CDS 35.0%
GCACATTATCTGTTTGCATA+AGG - chr1_2:72491154-72491173 None:intergenic 35.0%
ACCAAGTGATGTATAATCTC+CGG - chr1_2:72491234-72491253 None:intergenic 35.0%
! AAGACTGATAAAGGTTTGCT+AGG - chr1_2:72491316-72491335 None:intergenic 35.0%
GTAAACCGACCATTACAATT+TGG - chr1_2:72491425-72491444 None:intergenic 35.0%
! TAATGGTCGGTTTACATCTT+CGG + chr1_2:72491430-72491449 Msa0090440:CDS 35.0%
ATCTTCGGTACAAACTCTTT+GGG + chr1_2:72491445-72491464 Msa0090440:CDS 35.0%
! GAAAATGTTGATGAGATTGC+TGG + chr1_2:72491548-72491567 Msa0090440:CDS 35.0%
ATTGCTGGTACATTCCAAAA+AGG + chr1_2:72491563-72491582 Msa0090440:CDS 35.0%
TTGGTTCAGAAGGAATAACA+AGG + chr1_2:72491588-72491607 Msa0090440:CDS 35.0%
AATAACAAGGTCAATTGCCA+GGG + chr1_2:72491601-72491620 Msa0090440:CDS 35.0%
TTACAAGATGCATTAGCTAG+TGG + chr1_2:72491701-72491720 Msa0090440:CDS 35.0%
! GCTCAGAATTTAACTTTGAC+GGG + chr1_2:72491741-72491760 Msa0090440:CDS 35.0%
AAGATTTGCAAATAAGGGGA+AGG + chr1_2:72491814-72491833 Msa0090440:CDS 35.0%
!!! TACTGATTCAGAGTTCCTTT+TGG - chr1_2:72491864-72491883 None:intergenic 35.0%
!!! GGATCTTTTACGTACTGATT+CGG - chr1_2:72491876-72491895 None:intergenic 35.0%
TTGCTGCACTAATGGAATAA+AGG - chr1_2:72492086-72492105 None:intergenic 35.0%
ATTAGTGCAGCAAAAACAAG+CGG + chr1_2:72492093-72492112 Msa0090440:CDS 35.0%
!! AATATATGGGTTGCCTCTTT+TGG + chr1_2:72492169-72492188 Msa0090440:intron 35.0%
TTTGCGCACAATATTGTCAA+TGG + chr1_2:72492194-72492213 Msa0090440:intron 35.0%
ATAAATGTGGGTTTGATCCA+TGG + chr1_2:72492239-72492258 Msa0090440:intron 35.0%
TTTAATGTCAGCATTACGCT+TGG - chr1_2:72492482-72492501 None:intergenic 35.0%
AAAGAAGGAGGAAGAAGAAA+TGG + chr1_2:72492552-72492571 Msa0090440:CDS 35.0%
GGAGAAAGATAGAAAAAGGA+AGG + chr1_2:72492615-72492634 Msa0090440:CDS 35.0%
TTCAGCCAATAACATAACCA+AGG + chr1_2:72492922-72492941 Msa0090440:CDS 35.0%
GCTTTCCTTGGTTATGTTAT+TGG - chr1_2:72492930-72492949 None:intergenic 35.0%
CTTATCATAACAGCTTTCCT+TGG - chr1_2:72492942-72492961 None:intergenic 35.0%
!! ATTTCATAGCAGTTTTGTCC+CGG + chr1_2:72493056-72493075 Msa0090440:intron 35.0%
! TGGAAAAGATTTTTCCTAGC+CGG - chr1_2:72493078-72493097 None:intergenic 35.0%
CCAAAAATCACATTGAGAGA+AGG - chr1_2:72493700-72493719 None:intergenic 35.0%
! CCTTCTCTCAATGTGATTTT+TGG + chr1_2:72493697-72493716 Msa0090440:intron 35.0%
!! TTTGGGTTTTCAACCTTTCA+TGG + chr1_2:72493715-72493734 Msa0090440:intron 35.0%
TTATTTCCAGAACCCAAACA+GGG - chr1_2:72493861-72493880 None:intergenic 35.0%
ATTATTTCCAGAACCCAAAC+AGG - chr1_2:72493862-72493881 None:intergenic 35.0%
GGGAAGAAATAATCATTGAC+AGG - chr1_2:72493988-72494007 None:intergenic 35.0%
! CTTTTATAGTTCTCCTACCT+CGG + chr1_2:72494138-72494157 Msa0090440:intron 35.0%
TTCTGTTATAGTACCAACTC+AGG + chr1_2:72494165-72494184 Msa0090440:CDS 35.0%
CTTCCATGCATTTCACAATA+AGG + chr1_2:72494206-72494225 Msa0090440:CDS 35.0%
ATCCCTTATTGTGAAATGCA+TGG - chr1_2:72494212-72494231 None:intergenic 35.0%
AAGAGAGATAGGTGTGTGTT+TGG - chr1_2:72485985-72486004 None:intergenic 40.0%
ACTTCGTTCAGATCTTCGAT+CGG + chr1_2:72486070-72486089 Msa0090440:CDS 40.0%
TGAGGATGAGTTTAGGAAGA+AGG - chr1_2:72486149-72486168 None:intergenic 40.0%
CTTCCTAAACTCATCCTCAA+CGG + chr1_2:72486150-72486169 Msa0090440:CDS 40.0%
ATTCCGTTGAGGATGAGTTT+AGG - chr1_2:72486156-72486175 None:intergenic 40.0%
!! CTCGATTTTCACTTGTTAGC+AGG + chr1_2:72486243-72486262 Msa0090440:intron 40.0%
TGCTCCACTTAACAGAATCA+AGG - chr1_2:72486401-72486420 None:intergenic 40.0%
AGACATGAAGTTGTGTCTGA+AGG + chr1_2:72486725-72486744 Msa0090440:CDS 40.0%
ATGCAGTCTATACAGCAATC+TGG + chr1_2:72486793-72486812 Msa0090440:CDS 40.0%
! TTCAATTTTGCCGGATTGCT+CGG + chr1_2:72486904-72486923 Msa0090440:CDS 40.0%
TTCAAGTGATCCTCCAGAAT+TGG + chr1_2:72486946-72486965 Msa0090440:CDS 40.0%
ATCCTCCAGAATTGGATTCA+GGG + chr1_2:72486954-72486973 Msa0090440:CDS 40.0%
!! CTTGGTTCTATCTGATTCTG+AGG - chr1_2:72486989-72487008 None:intergenic 40.0%
ACTTTGCTAGTGACACTACT+GGG - chr1_2:72487033-72487052 None:intergenic 40.0%
AACTTTGCTAGTGACACTAC+TGG - chr1_2:72487034-72487053 None:intergenic 40.0%
TGTCACTAGCAAAGTTGCAA+AGG + chr1_2:72487038-72487057 Msa0090440:CDS 40.0%
TAGCAAAGTTGCAAAGGTCA+AGG + chr1_2:72487044-72487063 Msa0090440:CDS 40.0%
!! ACAGTGCAAAAGCATCCAAA+CGG + chr1_2:72487095-72487114 Msa0090440:CDS 40.0%
! ATGGTGATAATGCTGGTGAT+TGG + chr1_2:72487128-72487147 Msa0090440:CDS 40.0%
CTGAAATTTCTCCTTCTCCT+TGG - chr1_2:72487243-72487262 None:intergenic 40.0%
TTCAGTGAATTCTGCAGAGA+AGG + chr1_2:72487258-72487277 Msa0090440:CDS 40.0%
AAGGAGAACATTGCTGAAGT+TGG + chr1_2:72487277-72487296 Msa0090440:CDS 40.0%
TACTGCCAACACTAAGGTTA+GGG + chr1_2:72487570-72487589 Msa0090440:CDS 40.0%
! TTGATTTGAAAGAAGGACGC+CGG + chr1_2:72487701-72487720 Msa0090440:CDS 40.0%
CTTTATCTGGTGACATTCTC+CGG - chr1_2:72487723-72487742 None:intergenic 40.0%
!! TTCAATGGTTCTGACAAAGC+CGG - chr1_2:72487751-72487770 None:intergenic 40.0%
GTGTCACAAACTTTAACGCT+AGG + chr1_2:72487857-72487876 Msa0090440:CDS 40.0%
TCAACATTCGTGTCATCAGT+AGG - chr1_2:72487898-72487917 None:intergenic 40.0%
!! ACACGAATGTTGATTTGGCA+CGG + chr1_2:72487905-72487924 Msa0090440:CDS 40.0%
!! ATAAGTCACCATTTTGACCC+GGG - chr1_2:72487951-72487970 None:intergenic 40.0%
ATGGCAGTCAGTTGAAAAAC+TGG - chr1_2:72488007-72488026 None:intergenic 40.0%
TATCAAAGAAGACAATCCCG+AGG + chr1_2:72488197-72488216 Msa0090440:CDS 40.0%
TTCAATGACAATGACAGCCT+CGG - chr1_2:72488217-72488236 None:intergenic 40.0%
TCATTGTCATTGAAGGATGC+CGG + chr1_2:72488223-72488242 Msa0090440:CDS 40.0%
!! TTCAATGGTTCTGACAAAGC+CGG - chr1_2:72487751-72487770 None:intergenic 40.0%
GAAGTTACTCGATGACATAC+AGG + chr1_2:72488290-72488309 Msa0090440:CDS 40.0%
ATGGCAGTCAGTTGAAAAAC+TGG - chr1_2:72488007-72488026 None:intergenic 40.0%
ATACTTGAGGTTCCATTTGC+AGG - chr1_2:72488702-72488721 None:intergenic 40.0%
TCAACATTTGGCACATGATC+AGG + chr1_2:72488755-72488774 Msa0090440:CDS 40.0%
TAATAGCCCAACAGATGTGA+TGG + chr1_2:72488806-72488825 Msa0090440:CDS 40.0%
GTATCTTCCATCACATCTGT+TGG - chr1_2:72488816-72488835 None:intergenic 40.0%
! AGATGTGATGGAAGATACCA+AGG + chr1_2:72488818-72488837 Msa0090440:CDS 40.0%
AGAGTAATGAAACAGCAGAG+CGG + chr1_2:72489212-72489231 Msa0090440:intron 40.0%
!! AGCAATACCTAGGCTTTGTT+TGG + chr1_2:72489373-72489392 Msa0090440:intron 40.0%
!! GCAATACCTAGGCTTTGTTT+GGG + chr1_2:72489374-72489393 Msa0090440:intron 40.0%
! TTTGAGTTCCCTGAAATGAG+GGG - chr1_2:72489464-72489483 None:intergenic 40.0%
!! TAAGGCTTTGTTTGGGAGTT+TGG - chr1_2:72489674-72489693 None:intergenic 40.0%
ACTCTAGTAATCCCATCTAG+GGG + chr1_2:72489807-72489826 Msa0090440:intron 40.0%
AATGATGTTTCCCCCTAGAT+GGG - chr1_2:72489821-72489840 None:intergenic 40.0%
AAATGATGTTTCCCCCTAGA+TGG - chr1_2:72489822-72489841 None:intergenic 40.0%
ACAACGAAGATGCCAAAAGT+TGG - chr1_2:72489941-72489960 None:intergenic 40.0%
AGGATCCCTACTTAGATTAG+AGG + chr1_2:72490138-72490157 Msa0090440:intron 40.0%
TCCCTACTTAGATTAGAGGA+TGG + chr1_2:72490142-72490161 Msa0090440:intron 40.0%
CCCATCCTCTAATCTAAGTA+GGG - chr1_2:72490146-72490165 None:intergenic 40.0%
CCCTACTTAGATTAGAGGAT+GGG + chr1_2:72490143-72490162 Msa0090440:intron 40.0%
TCCCATCCTCTAATCTAAGT+AGG - chr1_2:72490147-72490166 None:intergenic 40.0%
TACTTAGATTAGAGGATGGG+AGG + chr1_2:72490146-72490165 Msa0090440:intron 40.0%
ACTTAGATTAGAGGATGGGA+GGG + chr1_2:72490147-72490166 Msa0090440:intron 40.0%
ACAGTAACTTTGATGCAAGC+TGG + chr1_2:72490241-72490260 Msa0090440:intron 40.0%
!! TGCAAGCTACTGATTTAACC+TGG + chr1_2:72490294-72490313 Msa0090440:intron 40.0%
!! CTACTGATTTAACCTGGCAT+TGG + chr1_2:72490300-72490319 Msa0090440:intron 40.0%
AAGAGATGGCTCATGCTATA+AGG - chr1_2:72490443-72490462 None:intergenic 40.0%
! GATTTGCTTCTGGCAACATA+AGG - chr1_2:72490887-72490906 None:intergenic 40.0%
TGGCATCTTGAGGTTAATTC+TGG + chr1_2:72490963-72490982 Msa0090440:CDS 40.0%
TGAGAATTCAGTATCACCTC+CGG - chr1_2:72491051-72491070 None:intergenic 40.0%
GGTGATACTGAATTCTCAGA+CGG + chr1_2:72491053-72491072 Msa0090440:CDS 40.0%
AAGCTTTACCAGAGTTCGAA+GGG + chr1_2:72491126-72491145 Msa0090440:CDS 40.0%
ATGAGTCTTCCTAGTAACTC+CGG + chr1_2:72491212-72491231 Msa0090440:CDS 40.0%
GTATAATCTCCGGAGTTACT+AGG - chr1_2:72491224-72491243 None:intergenic 40.0%
TCCGGAGATTATACATCACT+TGG + chr1_2:72491230-72491249 Msa0090440:CDS 40.0%
GGAGTAGAAGAATAGCATGA+TGG - chr1_2:72491278-72491297 None:intergenic 40.0%
!! GTCTTTACCTAATGGACTTC+TGG + chr1_2:72491331-72491350 Msa0090440:CDS 40.0%
!! TTTACCTAATGGACTTCTGG+AGG + chr1_2:72491334-72491353 Msa0090440:CDS 40.0%
!! TTACCTAATGGACTTCTGGA+GGG + chr1_2:72491335-72491354 Msa0090440:CDS 40.0%
ATTTGGTCGGCAATCAGAAA+GGG - chr1_2:72491408-72491427 None:intergenic 40.0%
AATTTGGTCGGCAATCAGAA+AGG - chr1_2:72491409-72491428 None:intergenic 40.0%
GATTGCCGACCAAATTGTAA+TGG + chr1_2:72491413-72491432 Msa0090440:CDS 40.0%
ACCGACCATTACAATTTGGT+CGG - chr1_2:72491421-72491440 None:intergenic 40.0%
CATCTTCGGTACAAACTCTT+TGG + chr1_2:72491444-72491463 Msa0090440:CDS 40.0%
AATTCGAATTTCGGCAGTTC+AGG + chr1_2:72491476-72491495 Msa0090440:CDS 40.0%
! GGTACATTCCAAAAAGGCAT+TGG + chr1_2:72491569-72491588 Msa0090440:CDS 40.0%
! CTTCTGAACCAATGCCTTTT+TGG - chr1_2:72491580-72491599 None:intergenic 40.0%
!! CAAAAAGGCATTGGTTCAGA+AGG + chr1_2:72491578-72491597 Msa0090440:CDS 40.0%
GAATAACAAGGTCAATTGCC+AGG + chr1_2:72491600-72491619 Msa0090440:CDS 40.0%
ATAACAAGGTCAATTGCCAG+GGG + chr1_2:72491602-72491621 Msa0090440:CDS 40.0%
AAGAAACCTGACATGCAGAA+TGG + chr1_2:72491782-72491801 Msa0090440:CDS 40.0%
CTGACATGCAGAATGGAAAT+GGG + chr1_2:72491789-72491808 Msa0090440:CDS 40.0%
! GTGTAGTAAATGGTGCCAAA+AGG + chr1_2:72491846-72491865 Msa0090440:CDS 40.0%
CAGTACGTAAAAGATCCAGT+AGG + chr1_2:72491879-72491898 Msa0090440:CDS 40.0%
TCCAGTAGGTCAAAGTTATC+TGG + chr1_2:72491893-72491912 Msa0090440:CDS 40.0%
TCCAGATAACTTTGACCTAC+TGG - chr1_2:72491897-72491916 None:intergenic 40.0%
TTTCTCTTGGCACCATTTAC+TGG - chr1_2:72491938-72491957 None:intergenic 40.0%
!! TACTGATTCGGAGTTTCTCT+TGG - chr1_2:72491951-72491970 None:intergenic 40.0%
!!! GCTTGTTTTTGCTGCACTAA+TGG - chr1_2:72492094-72492113 None:intergenic 40.0%
! CAGCGGTTTTTACAGGTAAA+TGG + chr1_2:72492116-72492135 Msa0090440:intron 40.0%
TTGTGCGCAAAATCCAAAAG+AGG - chr1_2:72492185-72492204 None:intergenic 40.0%
TCAAACCCACATTTATCTGG+TGG - chr1_2:72492235-72492254 None:intergenic 40.0%
GGATCAAACCCACATTTATC+TGG - chr1_2:72492238-72492257 None:intergenic 40.0%
ACCCTAACATGTGAACATGT+AGG + chr1_2:72492412-72492431 Msa0090440:intron 40.0%
GCCTACATGTTCACATGTTA+GGG - chr1_2:72492416-72492435 None:intergenic 40.0%
TGCCTACATGTTCACATGTT+AGG - chr1_2:72492417-72492436 None:intergenic 40.0%
AAGCGAATGAGCAAAAGAAG+AGG + chr1_2:72492500-72492519 Msa0090440:CDS 40.0%
GAATGAGCAAAAGAAGAGGA+AGG + chr1_2:72492504-72492523 Msa0090440:CDS 40.0%
! CTGCAAGAGCATAATAGACA+AGG + chr1_2:72492854-72492873 Msa0090440:CDS 40.0%
CGAATGTGCCAATAAAGGAA+AGG + chr1_2:72492976-72492995 Msa0090440:CDS 40.0%
! GGAAAAGATTTTTCCTAGCC+GGG - chr1_2:72493077-72493096 None:intergenic 40.0%
CAAAATAGGTACCCCTGTTT+GGG + chr1_2:72493846-72493865 Msa0090440:intron 40.0%
TATTTCCAGAACCCAAACAG+GGG - chr1_2:72493860-72493879 None:intergenic 40.0%
ACCCGGAAACAATATTTCCT+CGG + chr1_2:72494017-72494036 Msa0090440:intron 40.0%
TGCCGAGGAAATATTGTTTC+CGG - chr1_2:72494022-72494041 None:intergenic 40.0%
ATATCGCAAAAACTTTGCCG+AGG - chr1_2:72494037-72494056 None:intergenic 40.0%
ATAGTACCAACTCAGGAATC+AGG + chr1_2:72494172-72494191 Msa0090440:CDS 40.0%
GGAGTGAGAAGAAGAGAGAT+AGG - chr1_2:72485996-72486015 None:intergenic 45.0%
ATCGACGCTGTGAACAATGT+CGG + chr1_2:72486035-72486054 Msa0090440:exon 45.0%
TCGTCAGGAATCTCGTCTAT+GGG + chr1_2:72486116-72486135 Msa0090440:CDS 45.0%
GAGAGAGAGAGAGAACCTTT+GGG - chr1_2:72486210-72486229 None:intergenic 45.0%
AGAGAGAGAGAGAGAACCTT+TGG - chr1_2:72486211-72486230 None:intergenic 45.0%
CTGCATTGTTGACCAGTGAA+AGG - chr1_2:72486779-72486798 None:intergenic 45.0%
GATCCTCCAGAATTGGATTC+AGG + chr1_2:72486953-72486972 Msa0090440:CDS 45.0%
TCCTCCAGAATTGGATTCAG+GGG + chr1_2:72486955-72486974 Msa0090440:CDS 45.0%
TGGAAACTCTCAGAGACTCT+TGG - chr1_2:72487007-72487026 None:intergenic 45.0%
! AAAGCATCCAAACGGTTGTC+AGG + chr1_2:72487103-72487122 Msa0090440:CDS 45.0%
! TCAGGAGATGGTGATAATGC+TGG + chr1_2:72487121-72487140 Msa0090440:CDS 45.0%
ATCTCTTCCAGTATAGACGG+TGG + chr1_2:72487352-72487371 Msa0090440:CDS 45.0%
TCTCTTCCAGTATAGACGGT+GGG + chr1_2:72487353-72487372 Msa0090440:CDS 45.0%
TAAAGACCCACCGTCTATAC+TGG - chr1_2:72487362-72487381 None:intergenic 45.0%
AGATGTGGCTGAAAAGGACT+TGG + chr1_2:72487408-72487427 Msa0090440:CDS 45.0%
AGTCTTGACCCCAAACAAGA+AGG - chr1_2:72487547-72487566 None:intergenic 45.0%
ACTCACTACTGCCAACACTA+AGG + chr1_2:72487564-72487583 Msa0090440:CDS 45.0%
CTACTGCCAACACTAAGGTT+AGG + chr1_2:72487569-72487588 Msa0090440:CDS 45.0%
ATCCTCCCTAACCTTAGTGT+TGG - chr1_2:72487578-72487597 None:intergenic 45.0%
ATCAGGGGAAAGCCTTAAGA+CGG - chr1_2:72487605-72487624 None:intergenic 45.0%
TCACAGACACAGCGAAATCA+GGG - chr1_2:72487621-72487640 None:intergenic 45.0%
ATCACAGACACAGCGAAATC+AGG - chr1_2:72487622-72487641 None:intergenic 45.0%
GGCGTCCTTCTTTCAAATCA+AGG - chr1_2:72487702-72487721 None:intergenic 45.0%
GAAGTTACTCGATGACATCC+AGG + chr1_2:72487768-72487787 Msa0090440:CDS 45.0%
AAGAATCTGCCAGAACTTCC+TGG - chr1_2:72487789-72487808 None:intergenic 45.0%
AAATGGTGACTTATTGCCGC+AGG + chr1_2:72487957-72487976 Msa0090440:CDS 45.0%
CATGCTCTCAGCATAAGAGA+AGG + chr1_2:72488073-72488092 Msa0090440:CDS 45.0%
CTCTCAGCATAAGAGAAGGA+AGG + chr1_2:72488077-72488096 Msa0090440:CDS 45.0%
TCTTCCTGACTCTACACTCT+TGG + chr1_2:72488122-72488141 Msa0090440:CDS 45.0%
TCAATGACAATGACAGCCTC+GGG - chr1_2:72488216-72488235 None:intergenic 45.0%
GAGGCTGTCATTGTCATTGA+AGG + chr1_2:72488216-72488235 Msa0090440:CDS 45.0%
GTCACCAAATAAAGAACCGC+CGG + chr1_2:72488251-72488270 Msa0090440:CDS 45.0%
AAAGCCGGCGGTTCTTTATT+TGG - chr1_2:72488258-72488277 None:intergenic 45.0%
CGATGACATACAGGAAGTTC+TGG + chr1_2:72488299-72488318 Msa0090440:CDS 45.0%
ACCCGAGCAAATGGTATTTG+GGG - chr1_2:72488457-72488476 None:intergenic 45.0%
GACCCGAGCAAATGGTATTT+GGG - chr1_2:72488458-72488477 None:intergenic 45.0%
TGACCCGAGCAAATGGTATT+TGG - chr1_2:72488459-72488478 None:intergenic 45.0%
ACCATTTGCTCGGGTCAAAA+TGG + chr1_2:72488462-72488481 Msa0090440:CDS 45.0%
!! ACCATTTTGACCCGAGCAAA+TGG - chr1_2:72488466-72488485 None:intergenic 45.0%
AAATGGTGACTTATTGCCGC+AGG + chr1_2:72487957-72487976 Msa0090440:CDS 45.0%
CATGCTCTCAGCATAAGAGA+AGG + chr1_2:72488073-72488092 Msa0090440:CDS 45.0%
CTCTCAGCATAAGAGAAGGA+AGG + chr1_2:72488077-72488096 Msa0090440:CDS 45.0%
TCTTCCTGACTCTACACTCT+TGG + chr1_2:72488122-72488141 Msa0090440:CDS 45.0%
ATTTGCAGGCCTTTGGTCAA+TGG - chr1_2:72488688-72488707 None:intergenic 45.0%
ATTGACCAAAGGCCTGCAAA+TGG + chr1_2:72488687-72488706 Msa0090440:CDS 45.0%
TGAACTTCAATGACAGCCTC+AGG - chr1_2:72488738-72488757 None:intergenic 45.0%
ACATTTGGCACATGATCAGG+CGG + chr1_2:72488758-72488777 Msa0090440:CDS 45.0%
CATGATCAGGCGGATGATAT+AGG + chr1_2:72488768-72488787 Msa0090440:CDS 45.0%
AATTGTACGTCTGGGAGTCT+TGG + chr1_2:72489014-72489033 Msa0090440:intron 45.0%
TAATGAAACAGCAGAGCGGT+GGG + chr1_2:72489216-72489235 Msa0090440:intron 45.0%
CAAACTCCCAAACAAAGCCT+AGG - chr1_2:72489672-72489691 None:intergenic 45.0%
!! CTAGGCTTTGTTTGGGAGTT+TGG + chr1_2:72489381-72489400 Msa0090440:intron 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + chr1_2:72489385-72489404 Msa0090440:intron 45.0%
! TTTGGGAGTTTGGAGGGTAT+TGG + chr1_2:72489391-72489410 Msa0090440:intron 45.0%
!! TTGGGAGTTTGGAGGGTATT+GGG + chr1_2:72489392-72489411 Msa0090440:intron 45.0%
TACAAAACCCCCCTCATTTC+AGG + chr1_2:72489452-72489471 Msa0090440:intron 45.0%
ACAAAACCCCCCTCATTTCA+GGG + chr1_2:72489453-72489472 Msa0090440:intron 45.0%
TTGAGTTCCCTGAAATGAGG+GGG - chr1_2:72489463-72489482 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - chr1_2:72489386-72489405 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - chr1_2:72489385-72489404 None:intergenic 45.0%
CTCTAGTAATCCCATCTAGG+GGG + chr1_2:72489808-72489827 Msa0090440:intron 45.0%
ATGGGAGGGAACAAGGATAA+AGG + chr1_2:72490161-72490180 Msa0090440:intron 45.0%
TGGGAGGGAACAAGGATAAA+GGG + chr1_2:72490162-72490181 Msa0090440:intron 45.0%
AGGATAAAGGGAGAGGTTCA+AGG + chr1_2:72490174-72490193 Msa0090440:intron 45.0%
GGATAAAGGGAGAGGTTCAA+GGG + chr1_2:72490175-72490194 Msa0090440:intron 45.0%
CAGTCTAAAGAACCAATGCC+AGG - chr1_2:72490315-72490334 None:intergenic 45.0%
!! CTGGCATTGGTTCTTTAGAC+TGG + chr1_2:72490313-72490332 Msa0090440:intron 45.0%
!! ACATAAGGGTGTCTGAGCTT+CGG - chr1_2:72490872-72490891 None:intergenic 45.0%
TGACTCAATGAGGTTCAGCA+TGG + chr1_2:72490923-72490942 Msa0090440:CDS 45.0%
AGTAGAAGAATCAATCCCGG+AGG + chr1_2:72491032-72491051 Msa0090440:CDS 45.0%
GAGAATTCAGTATCACCTCC+GGG - chr1_2:72491050-72491069 None:intergenic 45.0%
GAAGCTTTACCAGAGTTCGA+AGG + chr1_2:72491125-72491144 Msa0090440:CDS 45.0%
ATAAGGAACCCTTCGAACTC+TGG - chr1_2:72491137-72491156 None:intergenic 45.0%
TGCTCGAGACGAAATGGAAT+TGG + chr1_2:72491184-72491203 Msa0090440:CDS 45.0%
GCTAGGCTATGCAACTTGTA+TGG - chr1_2:72491299-72491318 None:intergenic 45.0%
TATCCCTCCAGAAGTCCATT+AGG - chr1_2:72491341-72491360 None:intergenic 45.0%
! AATGGACTTCTGGAGGGATA+TGG + chr1_2:72491341-72491360 Msa0090440:CDS 45.0%
! TTCTGGAGGGATATGGTCTA+AGG + chr1_2:72491348-72491367 Msa0090440:CDS 45.0%
GCCGACCAAATTGTAATGGT+CGG + chr1_2:72491417-72491436 Msa0090440:CDS 45.0%
AATATCAGCTAGTAGTCCCC+TGG - chr1_2:72491621-72491640 None:intergenic 45.0%
! TGCATTAGCTAGTGGACGTA+AGG + chr1_2:72491709-72491728 Msa0090440:CDS 45.0%
CCATTTCCATTCTGCATGTC+AGG - chr1_2:72491791-72491810 None:intergenic 45.0%
CCTGACATGCAGAATGGAAA+TGG + chr1_2:72491788-72491807 Msa0090440:CDS 45.0%
!!! CAACGATGTCCCACTTTTTC+TGG + chr1_2:72492019-72492038 Msa0090440:CDS 45.0%
!!! GATGTCCCACTTTTTCTGGA+GGG + chr1_2:72492023-72492042 Msa0090440:CDS 45.0%
GACTTCCCTCCAGAAAAAGT+GGG - chr1_2:72492031-72492050 None:intergenic 45.0%
AGACTTCCCTCCAGAAAAAG+TGG - chr1_2:72492032-72492051 None:intergenic 45.0%
GCGCACAATATTGTCAATGG+TGG + chr1_2:72492197-72492216 Msa0090440:intron 45.0%
CAAAAATTGCTTATGGCGGC+TGG + chr1_2:72492266-72492285 Msa0090440:intron 45.0%
GCCTTCTCTGATTAAAGCTG+AGG + chr1_2:72492453-72492472 Msa0090440:CDS 45.0%
! GCCTCAGCTTTAATCAGAGA+AGG - chr1_2:72492457-72492476 None:intergenic 45.0%
GAAGAGGAAGGAGTTCATGA+TGG + chr1_2:72492516-72492535 Msa0090440:CDS 45.0%
GGAGCAGCAGAAGAAAAAGA+AGG + chr1_2:72492537-72492556 Msa0090440:CDS 45.0%
GCAGCAGAAGAAAAAGAAGG+AGG + chr1_2:72492540-72492559 Msa0090440:CDS 45.0%
! ACATGAAGCTGCAAGAGCAT+GGG + chr1_2:72492647-72492666 Msa0090440:CDS 45.0%
GTGAAGAAGTCCATGAAAGC+AGG + chr1_2:72492792-72492811 Msa0090440:CDS 45.0%
! GTTATTGGCTGAATCGCTGA+TGG - chr1_2:72492915-72492934 None:intergenic 45.0%
GTGAGCGAATGTGCCAATAA+AGG + chr1_2:72492971-72492990 Msa0090440:CDS 45.0%
AGTTTATGCCATCATGGGCA+AGG + chr1_2:72493620-72493639 Msa0090440:CDS 45.0%
ACAACAAACCTTGCCCATGA+TGG - chr1_2:72493631-72493650 None:intergenic 45.0%
! AAAAGCACATGCGCCATGAA+AGG - chr1_2:72493731-72493750 None:intergenic 45.0%
GCAAAATAGGTACCCCTGTT+TGG + chr1_2:72493845-72493864 Msa0090440:intron 45.0%
TTCTTCCCAGAAAATGGACC+CGG + chr1_2:72494000-72494019 Msa0090440:intron 45.0%
! TGTTTCCGGGTCCATTTTCT+GGG - chr1_2:72494008-72494027 None:intergenic 45.0%
! TTGTTTCCGGGTCCATTTTC+TGG - chr1_2:72494009-72494028 None:intergenic 45.0%
GCCGAGGAAATATTGTTTCC+GGG - chr1_2:72494021-72494040 None:intergenic 45.0%
TTATAGTTCTCCTACCTCGG+AGG + chr1_2:72494141-72494160 Msa0090440:intron 45.0%
TACTATAACAGAAGCCTCCG+AGG - chr1_2:72494158-72494177 None:intergenic 45.0%
AATCATCGAGCATGCTCGTC+AGG + chr1_2:72486101-72486120 Msa0090440:CDS 50.0%
CTCGTCAGGAATCTCGTCTA+TGG + chr1_2:72486115-72486134 Msa0090440:CDS 50.0%
CTCACTCACTCAGATCCCAA+AGG + chr1_2:72486192-72486211 Msa0090440:CDS 50.0%
! GCGCAGGCTTTCAATTTTGC+CGG + chr1_2:72486895-72486914 Msa0090440:CDS 50.0%
GCATTGTTGACCGAGCAATC+CGG - chr1_2:72486917-72486936 None:intergenic 50.0%
GATTGCTCGGTCAACAATGC+TGG + chr1_2:72486917-72486936 Msa0090440:CDS 50.0%
ATGGCCCCTGAATCCAATTC+TGG - chr1_2:72486962-72486981 None:intergenic 50.0%
CTAGTGACACTACTGGGTCA+TGG - chr1_2:72487027-72487046 None:intergenic 50.0%
AGTTGCAAAGGTCAAGGTCG+AGG + chr1_2:72487050-72487069 Msa0090440:CDS 50.0%
TCCAAACGGTTGTCAGGAGA+TGG + chr1_2:72487109-72487128 Msa0090440:CDS 50.0%
ACCATCTCCTGACAACCGTT+TGG - chr1_2:72487113-72487132 None:intergenic 50.0%
TGGTCTTCTTGTAGAGACGG+CGG - chr1_2:72487178-72487197 None:intergenic 50.0%
GAGTTTCAACCCAACAGCCA+AGG + chr1_2:72487223-72487242 Msa0090440:CDS 50.0%
TCTCCTTCTCCTTGGCTGTT+GGG - chr1_2:72487235-72487254 None:intergenic 50.0%
TTCTCCTTCTCCTTGGCTGT+TGG - chr1_2:72487236-72487255 None:intergenic 50.0%
TCTGTGCTCGGCATTATCAG+TGG - chr1_2:72487467-72487486 None:intergenic 50.0%
AGTTGCAGCAGATCTGTGCT+CGG - chr1_2:72487479-72487498 None:intergenic 50.0%
TGCCAACACTAAGGTTAGGG+AGG + chr1_2:72487573-72487592 Msa0090440:CDS 50.0%
CACAGACACAGCGAAATCAG+GGG - chr1_2:72487620-72487639 None:intergenic 50.0%
ATGACGGCGAAGAGACCAAT+AGG + chr1_2:72487662-72487681 Msa0090440:CDS 50.0%
TGACGGCGAAGAGACCAATA+GGG + chr1_2:72487663-72487682 Msa0090440:CDS 50.0%
GTCACCAGATAAAGAACCGC+CGG + chr1_2:72487729-72487748 Msa0090440:CDS 50.0%
AAAGCCGGCGGTTCTTTATC+TGG - chr1_2:72487736-72487755 None:intergenic 50.0%
!! AATGGTTCTGACAAAGCCGG+CGG - chr1_2:72487748-72487767 None:intergenic 50.0%
CGATGACATCCAGGAAGTTC+TGG + chr1_2:72487777-72487796 Msa0090440:CDS 50.0%
!! GAATGTTGATTTGGCACGGC+AGG + chr1_2:72487909-72487928 Msa0090440:CDS 50.0%
ACCCGGGCAAATGGTATTTG+GGG - chr1_2:72487935-72487954 None:intergenic 50.0%
GACCCGGGCAAATGGTATTT+GGG - chr1_2:72487936-72487955 None:intergenic 50.0%
TGACCCGGGCAAATGGTATT+TGG - chr1_2:72487937-72487956 None:intergenic 50.0%
ACCATTTGCCCGGGTCAAAA+TGG + chr1_2:72487940-72487959 Msa0090440:CDS 50.0%
!! ACCATTTTGACCCGGGCAAA+TGG - chr1_2:72487944-72487963 None:intergenic 50.0%
! TCTGCCAAGAGTGTAGAGTC+AGG - chr1_2:72488129-72488148 None:intergenic 50.0%
ACTTGCAGGCCTTTGGTCAA+TGG - chr1_2:72488166-72488185 None:intergenic 50.0%
ATTGACCAAAGGCCTGCAAG+TGG + chr1_2:72488165-72488184 Msa0090440:CDS 50.0%
ATACTCGAGGTTCCACTTGC+AGG - chr1_2:72488180-72488199 None:intergenic 50.0%
!! AATGGTTCTGACAAAGCCGG+CGG - chr1_2:72487748-72487767 None:intergenic 50.0%
GGCCCCAAATACCATTTGCT+CGG + chr1_2:72488452-72488471 Msa0090440:CDS 50.0%
GCCCCAAATACCATTTGCTC+GGG + chr1_2:72488453-72488472 Msa0090440:CDS 50.0%
TCCTGACTCTACACTCTTGG+CGG + chr1_2:72488125-72488144 Msa0090440:CDS 50.0%
AGGTTCCATTTGCAGGCCTT+TGG - chr1_2:72488695-72488714 None:intergenic 50.0%
GTAATGAAACAGCAGAGCGG+TGG + chr1_2:72489215-72489234 Msa0090440:intron 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + chr1_2:72489384-72489403 Msa0090440:intron 50.0%
!! TGGGAGTTTGGAGGGTATTG+GGG + chr1_2:72489393-72489412 Msa0090440:intron 50.0%
TGAGTTCCCTGAAATGAGGG+GGG - chr1_2:72489462-72489481 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - chr1_2:72489384-72489403 None:intergenic 50.0%
TTAGAGGATGGGAGGGAACA+AGG + chr1_2:72490154-72490173 Msa0090440:intron 50.0%
GGGAACAAGGATAAAGGGAG+AGG + chr1_2:72490167-72490186 Msa0090440:intron 50.0%
!! TTCAAGGGAGCATCCTCAGT+TGG + chr1_2:72490190-72490209 Msa0090440:intron 50.0%
! GACGGTTTGTCTGTTTCTCC+AGG + chr1_2:72491071-72491090 Msa0090440:CDS 50.0%
ATTTCGTCTCGAGCAGTGCA+TGG - chr1_2:72491179-72491198 None:intergenic 50.0%
ATGCACTGCTCGAGACGAAA+TGG + chr1_2:72491178-72491197 Msa0090440:CDS 50.0%
TCACTAATGCAGGGTAGCTC+TGG - chr1_2:72491521-72491540 None:intergenic 50.0%
!!! CGATGTCCCACTTTTTCTGG+AGG + chr1_2:72492022-72492041 Msa0090440:CDS 50.0%
GACATGAAGCTGCAAGAGCA+TGG + chr1_2:72492646-72492665 Msa0090440:CDS 50.0%
GCTGAATCGCTGATGGTCAA+AGG - chr1_2:72492908-72492927 None:intergenic 50.0%
!! ATAGCAGTTTTGTCCCGGCT+AGG + chr1_2:72493061-72493080 Msa0090440:intron 50.0%
AGCTTGTACGTGTGCTTAGC+AGG + chr1_2:72493352-72493371 Msa0090440:intron 50.0%
GCTTGTACGTGTGCTTAGCA+GGG + chr1_2:72493353-72493372 Msa0090440:intron 50.0%
! TCATGGCGCATGTGCTTTTG+TGG + chr1_2:72493732-72493751 Msa0090440:intron 50.0%
ATAACAGAAGCCTCCGAGGT+AGG - chr1_2:72494154-72494173 None:intergenic 50.0%
CTACGTCCTGATTCCTGAGT+TGG - chr1_2:72494181-72494200 None:intergenic 50.0%
CTTCTTCTCACTCCACCCTC+CGG + chr1_2:72486002-72486021 Msa0090440:five_prime_UTR 55.0%
! TCGATGATGTCAGCACCGGA+GGG - chr1_2:72486020-72486039 None:intergenic 55.0%
!! AGCGTCGATGATGTCAGCAC+CGG - chr1_2:72486024-72486043 None:intergenic 55.0%
GAGGAGGAGGAATTCCGTTG+AGG - chr1_2:72486167-72486186 None:intergenic 55.0%
ACGGAATTCCTCCTCCTCCA+TGG + chr1_2:72486169-72486188 Msa0090440:CDS 55.0%
TCTGAGTGAGTGAGCCATGG+AGG - chr1_2:72486186-72486205 None:intergenic 55.0%
GGATCTGAGTGAGTGAGCCA+TGG - chr1_2:72486189-72486208 None:intergenic 55.0%
GCCCCTGAATCCAATTCTGG+AGG - chr1_2:72486959-72486978 None:intergenic 55.0%
AAGGTCAAGGTCGAGGCAGA+AGG + chr1_2:72487057-72487076 Msa0090440:CDS 55.0%
GATTGGACTGCTGCAGCTAC+AGG + chr1_2:72487145-72487164 Msa0090440:CDS 55.0%
CAACCCAACAGCCAAGGAGA+AGG + chr1_2:72487229-72487248 Msa0090440:CDS 55.0%
GGGAGGATGCTTCCGTCTTA+AGG + chr1_2:72487590-72487609 Msa0090440:CDS 55.0%
GGCGAAGAGACCAATAGGGA+TGG + chr1_2:72487667-72487686 Msa0090440:CDS 55.0%
GGCCCCAAATACCATTTGCC+CGG + chr1_2:72487930-72487949 Msa0090440:CDS 55.0%
GCCCCAAATACCATTTGCCC+GGG + chr1_2:72487931-72487950 Msa0090440:CDS 55.0%
AGGTTCCACTTGCAGGCCTT+TGG - chr1_2:72488173-72488192 None:intergenic 55.0%
! TCCGCCAAGAGTGTAGAGTC+AGG - chr1_2:72488651-72488670 None:intergenic 55.0%
!! GGGAGTTTGGAGGGTATTGG+GGG + chr1_2:72489394-72489413 Msa0090440:intron 55.0%
!! GGAGTTTGGAGGGTATTGGG+GGG + chr1_2:72489395-72489414 Msa0090440:intron 55.0%
!! GAGTTTGGAGGGTATTGGGG+GGG + chr1_2:72489396-72489415 Msa0090440:intron 55.0%
!! AGTTTGGAGGGTATTGGGGG+GGG + chr1_2:72489397-72489416 Msa0090440:intron 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG - chr1_2:72489664-72489683 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG - chr1_2:72489665-72489684 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG - chr1_2:72489666-72489685 None:intergenic 55.0%
GAGGTTCAGCATGGACGAGA+AGG + chr1_2:72490932-72490951 Msa0090440:CDS 55.0%
GTTCAGCATGGACGAGAAGG+CGG + chr1_2:72490935-72490954 Msa0090440:CDS 55.0%
TTCAGCATGGACGAGAAGGC+GGG + chr1_2:72490936-72490955 Msa0090440:CDS 55.0%
ACTTCCCGTCCTGCGAATGA+TGG + chr1_2:72491371-72491390 Msa0090440:CDS 55.0%
CTTCCCGTCCTGCGAATGAT+GGG + chr1_2:72491372-72491391 Msa0090440:CDS 55.0%
ACTCCCATCATTCGCAGGAC+GGG - chr1_2:72491378-72491397 None:intergenic 55.0%
GACTCCCATCATTCGCAGGA+CGG - chr1_2:72491379-72491398 None:intergenic 55.0%
CTTGGACTCCCATCATTCGC+AGG - chr1_2:72491383-72491402 None:intergenic 55.0%
! CTGCGAATGATGGGAGTCCA+AGG + chr1_2:72491381-72491400 Msa0090440:CDS 55.0%
CGGCAATCAGAAAGGGACCT+TGG - chr1_2:72491401-72491420 None:intergenic 55.0%
GCAGCAAAAACAAGCGGCAG+CGG + chr1_2:72492099-72492118 Msa0090440:CDS 55.0%
! CAAGCGGCAGCGGTTTTTAC+AGG + chr1_2:72492109-72492128 Msa0090440:CDS 55.0%
AAAAGGTCAGGGCAGCACCA+TGG - chr1_2:72492316-72492335 None:intergenic 55.0%
! AGGTACCCCTGTTTGGGTTC+TGG + chr1_2:72493852-72493871 Msa0090440:intron 55.0%
! ATGATGTCAGCACCGGAGGG+TGG - chr1_2:72486017-72486036 None:intergenic 60.0%
! GTCGATGATGTCAGCACCGG+AGG - chr1_2:72486021-72486040 None:intergenic 60.0%
TGAGTGAGCCATGGAGGAGG+AGG - chr1_2:72486180-72486199 None:intergenic 60.0%
GAGTGAGTGAGCCATGGAGG+AGG - chr1_2:72486183-72486202 None:intergenic 60.0%
!! GTTTGGAGGGTATTGGGGGG+GGG + chr1_2:72489398-72489417 Msa0090440:intron 60.0%
!! TTTGGAGGGTATTGGGGGGG+GGG + chr1_2:72489399-72489418 Msa0090440:intron 60.0%
TTGGAGGGGAGGGGAAAGGA+GGG - chr1_2:72489655-72489674 None:intergenic 60.0%
TTTGGAGGGGAGGGGAAAGG+AGG - chr1_2:72489656-72489675 None:intergenic 60.0%
GAGTTTGGAGGGGAGGGGAA+AGG - chr1_2:72489659-72489678 None:intergenic 60.0%
TCAGCATGGACGAGAAGGCG+GGG + chr1_2:72490937-72490956 Msa0090440:CDS 60.0%
TACGCCACCCTATTCCGCCA+TGG + chr1_2:72492296-72492315 Msa0090440:intron 60.0%
! AGCACCATGGCGGAATAGGG+TGG - chr1_2:72492303-72492322 None:intergenic 60.0%
! GGCAGCACCATGGCGGAATA+GGG - chr1_2:72492306-72492325 None:intergenic 60.0%
ATGACGGTGATACGGGGCGC+AGG + chr1_2:72486879-72486898 Msa0090440:CDS 65.0%
GTCGAGGCAGAAGGCTCTCG+AGG + chr1_2:72487066-72487085 Msa0090440:CDS 65.0%
CCGTTACTGAGCAGCGCCTG+CGG - chr1_2:72487976-72487995 None:intergenic 65.0%
! CCGCAGGCGCTGCTCAGTAA+CGG + chr1_2:72487973-72487992 Msa0090440:CDS 65.0%
CCGTTACTGAGCAGCGCCTG+CGG - chr1_2:72487976-72487995 None:intergenic 65.0%
! CCGCAGGCGCTGCTCAGTAA+CGG + chr1_2:72487973-72487992 Msa0090440:CDS 65.0%
!! TTGGAGGGTATTGGGGGGGG+GGG + chr1_2:72489400-72489419 Msa0090440:intron 65.0%
TGGACGAGAAGGCGGGGTCA+TGG + chr1_2:72490943-72490962 Msa0090440:CDS 65.0%
GGCGGGGTCATGGCATCTTG+AGG + chr1_2:72490953-72490972 Msa0090440:CDS 65.0%
! GGGCAGCACCATGGCGGAAT+AGG - chr1_2:72492307-72492326 None:intergenic 65.0%
AGGTCAGGGCAGCACCATGG+CGG - chr1_2:72492313-72492332 None:intergenic 65.0%
!! TGGAGGGTATTGGGGGGGGG+GGG + chr1_2:72489401-72489420 Msa0090440:intron 70.0%
!! GGAGGGTATTGGGGGGGGGG+GGG + chr1_2:72489402-72489421 Msa0090440:intron 75.0%
!! GAGGGTATTGGGGGGGGGGG+GGG + chr1_2:72489403-72489422 Msa0090440:intron 75.0%
!! AGGGTATTGGGGGGGGGGGG+GGG + chr1_2:72489404-72489423 Msa0090440:intron 75.0%
!!! GGGTATTGGGGGGGGGGGGG+GGG + chr1_2:72489405-72489424 Msa0090440:intron 80.0%
!! GGTATTGGGGGGGGGGGGGG+GGG + chr1_2:72489406-72489425 Msa0090440:intron 80.0%
! GTATTGGGGGGGGGGGGGGG+GGG + chr1_2:72489407-72489426 Msa0090440:intron 80.0%
! TATTGGGGGGGGGGGGGGGG+GGG + chr1_2:72489408-72489427 Msa0090440:intron 80.0%
! ATTGGGGGGGGGGGGGGGGG+GGG + chr1_2:72489409-72489428 Msa0090440:intron 85.0%
! TTGGGGGGGGGGGGGGGGGG+GGG + chr1_2:72489410-72489429 Msa0090440:intron 90.0%
! TGGGGGGGGGGGGGGGGGGG+GGG + chr1_2:72489411-72489430 Msa0090440:intron 95.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 72485907 72494268 72485907 ID=Msa0090440;Name=Msa0090440
chr1_2 mRNA 72485907 72494268 72485907 ID=Msa0090440-mRNA-1;Parent=Msa0090440;Name=Msa0090440-mRNA-1;_AED=0.04;_eAED=0.04;_QI=144|0.83|0.85|1|1|1|7|10|1453
chr1_2 exon 72485907 72486213 72485907 ID=Msa0090440-mRNA-1:exon:25177;Parent=Msa0090440-mRNA-1
chr1_2 exon 72486717 72488887 72486717 ID=Msa0090440-mRNA-1:exon:25178;Parent=Msa0090440-mRNA-1
chr1_2 exon 72490846 72492130 72490846 ID=Msa0090440-mRNA-1:exon:25179;Parent=Msa0090440-mRNA-1
chr1_2 exon 72492434 72492699 72492434 ID=Msa0090440-mRNA-1:exon:25180;Parent=Msa0090440-mRNA-1
chr1_2 exon 72492791 72492997 72492791 ID=Msa0090440-mRNA-1:exon:25181;Parent=Msa0090440-mRNA-1
chr1_2 exon 72493484 72493641 72493484 ID=Msa0090440-mRNA-1:exon:25182;Parent=Msa0090440-mRNA-1
chr1_2 exon 72494147 72494268 72494147 ID=Msa0090440-mRNA-1:exon:25183;Parent=Msa0090440-mRNA-1
chr1_2 five_prime_UTR 72485907 72486050 72485907 ID=Msa0090440-mRNA-1:five_prime_utr;Parent=Msa0090440-mRNA-1
chr1_2 CDS 72486051 72486213 72486051 ID=Msa0090440-mRNA-1:cds;Parent=Msa0090440-mRNA-1
chr1_2 CDS 72486717 72488887 72486717 ID=Msa0090440-mRNA-1:cds;Parent=Msa0090440-mRNA-1
chr1_2 CDS 72490846 72492130 72490846 ID=Msa0090440-mRNA-1:cds;Parent=Msa0090440-mRNA-1
chr1_2 CDS 72492434 72492699 72492434 ID=Msa0090440-mRNA-1:cds;Parent=Msa0090440-mRNA-1
chr1_2 CDS 72492791 72492997 72492791 ID=Msa0090440-mRNA-1:cds;Parent=Msa0090440-mRNA-1
chr1_2 CDS 72493484 72493641 72493484 ID=Msa0090440-mRNA-1:cds;Parent=Msa0090440-mRNA-1
chr1_2 CDS 72494147 72494258 72494147 ID=Msa0090440-mRNA-1:cds;Parent=Msa0090440-mRNA-1
chr1_2 three_prime_UTR 72494259 72494268 72494259 ID=Msa0090440-mRNA-1:three_prime_utr;Parent=Msa0090440-mRNA-1
Gene Sequence

>Msa0090440

ATGTCGGCGATCGAGAAACACTTCGTTCAGATCTTCGATCGGAAAAAGCGAATCATCGAGCATGCTCGTCAGGAATCTCGTCTATGGGAGCATCACCTTCTTCCTAAACTCATCCTCAACGGAATTCCTCCTCCTCCATGGCTCACTCACTCAGATCCCAAAGATTTAAACAGACATGAAGTTGTGTCTGAAGGTTTACTATCACGAACACAATTTGGAATTCCTTTCACTGGTCAACAATGCAGTCTATACAGCAATCTGGATGCTGTTTTCAATGATGTTCAGTATCCTGTTGATTTACGCAATGAAGTCTGTGCTTTTAAAAATGACGGTGATACGGGGCGCAGGCTTTCAATTTTGCCGGATTGCTCGGTCAACAATGCTGGATGTGCTTCAAGTGATCCTCCAGAATTGGATTCAGGGGCCATTTCACCTCAGAATCAGATAGAACCAAGAGTCTCTGAGAGTTTCCATGACCCAGTAGTGTCACTAGCAAAGTTGCAAAGGTCAAGGTCGAGGCAGAAGGCTCTCGAGGAACGTAACAGTGCAAAAGCATCCAAACGGTTGTCAGGAGATGGTGATAATGCTGGTGATTGGACTGCTGCAGCTACAGGTTCTGCACCGCCGTCTCTACAAGAAGACCATATCAAGGATTTAAGCTTGGTCAATGAGTTTCAACCCAACAGCCAAGGAGAAGGAGAAATTTCAGTGAATTCTGCAGAGAAGGAGAACATTGCTGAAGTTGGTGCTTCTAGAAATACAAGGGCTGTTACTAGTCAAACAAAAGAAGGGCAGTTGATCTCTTCCAGTATAGACGGTGGGTCTTTACTTGCAGAGTCATTATACATTAAAGTAGATGTGGCTGAAAAGGACTTGGATGTCCAAGAAAATATAGCATCTGATGTGAATTCCACTGATAATGCCGAGCACAGATCTGCTGCAACTAATGCCAAAGTTCATCTTGATTTTGATGGATTAGTTGATAACGAACCTTCTTGTTTGGGGTCAAGACTCACTACTGCCAACACTAAGGTTAGGGAGGATGCTTCCGTCTTAAGGCTTTCCCCTGATTTCGCTGTGTCTGTGATTCCTAAGCAACTTGTTTTTGATGACGGCGAAGAGACCAATAGGGATGGAATAAATAGCCTTGATTTGAAAGAAGGACGCCGGAGAATGTCACCAGATAAAGAACCGCCGGCTTTGTCAGAACCATTGAAGTTACTCGATGACATCCAGGAAGTTCTGGCAGATTCTTTTTCTGAAGCAGTTACTGAAAATGGTTTGCTTAGACACTCAGACAAAAGTGTCACAAACTTTAACGCTAGGTTTTCATCTGGTTCTCCTACTGATGACACGAATGTTGATTTGGCACGGCAGGCCCCAAATACCATTTGCCCGGGTCAAAATGGTGACTTATTGCCGCAGGCGCTGCTCAGTAACGGAAAAGTTACCAGTTTTTCAACTGACTGCCATAATTTCATAAGTTCCACAGATAGTTTTACTAATAATGTGGAGCATTCATGCTCTCAGCATAAGAGAAGGAAGGTTGAAATTGAAACAGAGAAATTTCTTCCTGACTCTACACTCTTGGCAGAAAAGCTAGTTGATTCCATTGACCAAAGGCCTGCAAGTGGAACCTCGAGTATCAAAGAAGACAATCCCGAGGCTGTCATTGTCATTGAAGGATGCCGGAGAATGTCACCAAATAAAGAACCGCCGGCTTTGTCAGAACCATTGAAGTTACTCGATGACATACAGGAAGTTCTGGCAGATTCTTTTTCTGAAGCAGTTACTGAAAATGGTTTGCTTAGACATTCAGACAAAAGTGTCACAAACTTTAACGCTAGTTTCTCATCTGGTTCTCCTACTGATGACACAAATGTTGATTTGGCACAACAGGCCCCAAATACCATTTGCTCGGGTCAAAATGGTGACTTATTGCCGCAGGCGCTGCTCAGTAACGGAAAAGTTACCAGTTTTTCAACTGACTGCCATAATTTTAAAAATTCCACAGATAGTTTTACGAATAATGTGGAGCATTCATGCTCTCAGCATAAGAGAAGGAAGGTTGAAATTGAAAAAGAGAAATTTCTTCCTGACTCTACACTCTTGGCGGAAAAGCTAGTTGATTCCATTGACCAAAGGCCTGCAAATGGAACCTCAAGTATCAAAGAAGACAATCCTGAGGCTGTCATTGAAGTTCAACATTTGGCACATGATCAGGCGGATGATATAGGAGATCAACATGGTAGTAATAGCCCAACAGATGTGATGGAAGATACCAAGGAAAGTCAAAAAATGGAAGGGTCTTCAGTTAAAGTGAGAAAAGAAGAGAAACTTATATTGGATGGAAGAGGCCGAAGCTCAGACACCCTTATGTTGCCAGAAGCAAATCCCTTCAGTTTTAGTATTGACTCAATGAGGTTCAGCATGGACGAGAAGGCGGGGTCATGGCATCTTGAGGTTAATTCTGGACAAGATAGTGCAGAGCATCTGACTTGTGTTGAAAGAAGCACTTCAAGTAGAAGAATCAATCCCGGAGGTGATACTGAATTCTCAGACGGTTTGTCTGTTTCTCCAGGATTACGAGATTTGAATTTGATTGGTACAGGCGAAGCTTTACCAGAGTTCGAAGGGTTCCTTATGCAAACAGATAATGTGCAACCATGCACTGCTCGAGACGAAATGGAATTGGAAAGTATGAGTCTTCCTAGTAACTCCGGAGATTATACATCACTTGGTAGATCTAGATTCATACATTCTCCATCATGCTATTCTTCTACTCCATACAAGTTGCATAGCCTAGCAAACCTTTATCAGTCTTTACCTAATGGACTTCTGGAGGGATATGGTCTAAGGACTTCCCGTCCTGCGAATGATGGGAGTCCAAGGTCCCTTTCTGATTGCCGACCAAATTGTAATGGTCGGTTTACATCTTCGGTACAAACTCTTTGGGATCGATTTAATTCGAATTTCGGCAGTTCAGGAAAGCGTAAGAGTTCAAAACCAGAGCTACCCTGCATTAGTGAAGAAAATGAAAATGTTGATGAGATTGCTGGTACATTCCAAAAAGGCATTGGTTCAGAAGGAATAACAAGGTCAATTGCCAGGGGACTACTAGCTGATATTGTAGATAACGCCGAGTCAAAAATAAAGATTGTAGATAATGCAAACCCTTCAACATCAGTTTTACAAGATGCATTAGCTAGTGGACGTAAGGATTCTTTGAGCTCAGAATTTAACTTTGACGGGACTCCCAATAAAATAAAAAAGAAACCTGACATGCAGAATGGAAATGGGATAAGATTTGCAAATAAGGGGAAGGAAAACAAGAGTGTAGTAAATGGTGCCAAAAGGAACTCTGAATCAGTACGTAAAAGATCCAGTAGGTCAAAGTTATCTGGAAAAAATAGTATGAAAGATCCAGTAAATGGTGCCAAGAGAAACTCCGAATCAGTACGTAAAAGATCCAGTAAATCAAATTTATCTGGAAAAATTAGTTTGAAACAACGATGTCCCACTTTTTCTGGAGGGAAGTCTACACGCAGTAATATTGTATCCAATCTTACTTCCTTTATTCCATTAGTGCAGCAAAAACAAGCGGCAGCGGTTTTTACAGGCAAGAGAAATATCAAAGTGCCTTCTCTGATTAAAGCTGAGGCTGCCAAGCGTAATGCTGACATTAAAGCGAATGAGCAAAAGAAGAGGAAGGAGTTCATGATGGAGCAGCAGAAGAAAAAGAAGGAGGAAGAAGAAATGGCAGCTAAAGAAAAAAAACAAAGGGAAATTGAAGAGAAAAAGGAGAAAGATAGAAAAAGGAAGGCTGTTAATGACATGAAGCTGCAAGAGCATGGGAAGATACATGCGAAGAAAGCTAGAGCTGCAGGTGAAGAAGTCCATGAAAGCAGGAAAATTATAGAAGGAAGAGACAATTGTAACAACTTGCTACTGCAAGAGCATAATAGACAAGGCAATGTGCAAAAAATTTCAGAAACTGAACCTTTGACCATCAGCGATTCAGCCAATAACATAACCAAGGAAAGCTGTTATGATAAGTCAGAATCTGTGAGCGAATGTGCCAATAAAGGAAAGGCGAAAATGGTTGATTTGATCAAAGCTGTTGAAGACAATGACTCTATCATCAAAAACTCACTTCAAGAGCAATCATACGAGATGTCTCCATATAGATCAGATGATGATGAAGATGATGATGATGTACCAAATAACAAGTTTATGCCATCATGGGCAAGTTCTCCTACCTCGGAGGCTTCTGTTATAGTACCAACTCAGGAATCAGGACGTAGTGATTCTTCCATGCATTTCACAATAAGGGATTTTGTGTTAAGGTATGCTGTCTCTTGA
Protein sequence

>Msa0090440

MSAIEKHFVQIFDRKKRIIEHARQESRLWEHHLLPKLILNGIPPPPWLTHSDPKDLNRHEVVSEGLLSRTQFGIPFTGQQCSLYSNLDAVFNDVQYPVDLRNEVCAFKNDGDTGRRLSILPDCSVNNAGCASSDPPELDSGAISPQNQIEPRVSESFHDPVVSLAKLQRSRSRQKALEERNSAKASKRLSGDGDNAGDWTAAATGSAPPSLQEDHIKDLSLVNEFQPNSQGEGEISVNSAEKENIAEVGASRNTRAVTSQTKEGQLISSSIDGGSLLAESLYIKVDVAEKDLDVQENIASDVNSTDNAEHRSAATNAKVHLDFDGLVDNEPSCLGSRLTTANTKVREDASVLRLSPDFAVSVIPKQLVFDDGEETNRDGINSLDLKEGRRRMSPDKEPPALSEPLKLLDDIQEVLADSFSEAVTENGLLRHSDKSVTNFNARFSSGSPTDDTNVDLARQAPNTICPGQNGDLLPQALLSNGKVTSFSTDCHNFISSTDSFTNNVEHSCSQHKRRKVEIETEKFLPDSTLLAEKLVDSIDQRPASGTSSIKEDNPEAVIVIEGCRRMSPNKEPPALSEPLKLLDDIQEVLADSFSEAVTENGLLRHSDKSVTNFNASFSSGSPTDDTNVDLAQQAPNTICSGQNGDLLPQALLSNGKVTSFSTDCHNFKNSTDSFTNNVEHSCSQHKRRKVEIEKEKFLPDSTLLAEKLVDSIDQRPANGTSSIKEDNPEAVIEVQHLAHDQADDIGDQHGSNSPTDVMEDTKESQKMEGSSVKVRKEEKLILDGRGRSSDTLMLPEANPFSFSIDSMRFSMDEKAGSWHLEVNSGQDSAEHLTCVERSTSSRRINPGGDTEFSDGLSVSPGLRDLNLIGTGEALPEFEGFLMQTDNVQPCTARDEMELESMSLPSNSGDYTSLGRSRFIHSPSCYSSTPYKLHSLANLYQSLPNGLLEGYGLRTSRPANDGSPRSLSDCRPNCNGRFTSSVQTLWDRFNSNFGSSGKRKSSKPELPCISEENENVDEIAGTFQKGIGSEGITRSIARGLLADIVDNAESKIKIVDNANPSTSVLQDALASGRKDSLSSEFNFDGTPNKIKKKPDMQNGNGIRFANKGKENKSVVNGAKRNSESVRKRSSRSKLSGKNSMKDPVNGAKRNSESVRKRSSKSNLSGKISLKQRCPTFSGGKSTRSNIVSNLTSFIPLVQQKQAAAVFTGKRNIKVPSLIKAEAAKRNADIKANEQKKRKEFMMEQQKKKKEEEEMAAKEKKQREIEEKKEKDRKRKAVNDMKLQEHGKIHAKKARAAGEEVHESRKIIEGRDNCNNLLLQEHNRQGNVQKISETEPLTISDSANNITKESCYDKSESVSECANKGKAKMVDLIKAVEDNDSIIKNSLQEQSYEMSPYRSDDDEDDDDVPNNKFMPSWASSPTSEASVIVPTQESGRSDSSMHFTIRDFVLRYAVS*