Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0590000 | XP_013454867.1 | 99.555 | 449 | 2 | 0 | 1 | 449 | 1 | 449 | 0.0 | 942 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0590000 | sp|P29500|TBB1_PEA | 99.333 | 450 | 2 | 1 | 1 | 449 | 1 | 450 | 0.0 | 936 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0590000 | A0A072USS0 | 99.555 | 449 | 2 | 0 | 1 | 449 | 1 | 449 | 0.0 | 942 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0590000 | 0.817929 | 2.555020e-52 | -8.615850e-47 |
| Msa0013270 | Msa0590000 | 0.809643 | 1.709689e-50 | -8.615850e-47 |
| Msa0018920 | Msa0590000 | 0.808683 | 2.746096e-50 | -8.615850e-47 |
| Msa0027800 | Msa0590000 | 0.803678 | 3.108966e-49 | -8.615850e-47 |
| Msa0030070 | Msa0590000 | 0.814703 | 1.346243e-51 | -8.615850e-47 |
| Msa0044780 | Msa0590000 | -0.839181 | 1.847316e-57 | -8.615850e-47 |
| Msa0050530 | Msa0590000 | 0.803054 | 4.186386e-49 | -8.615850e-47 |
| Msa0063190 | Msa0590000 | 0.803519 | 3.353860e-49 | -8.615850e-47 |
| Msa0078130 | Msa0590000 | 0.813429 | 2.570953e-51 | -8.615850e-47 |
| Msa0080370 | Msa0590000 | 0.826272 | 2.971687e-54 | -8.615850e-47 |
| Msa0080440 | Msa0590000 | 0.809827 | 1.560867e-50 | -8.615850e-47 |
| Msa0100600 | Msa0590000 | 0.805330 | 1.406373e-49 | -8.615850e-47 |
| Msa0100890 | Msa0590000 | 0.815502 | 8.947719e-52 | -8.615850e-47 |
| Msa0106540 | Msa0590000 | 0.822732 | 2.023481e-53 | -8.615850e-47 |
| Msa0108630 | Msa0590000 | 0.837314 | 5.593777e-57 | -8.615850e-47 |
| Msa0125590 | Msa0590000 | 0.814292 | 1.659619e-51 | -8.615850e-47 |
| Msa0131810 | Msa0590000 | 0.814219 | 1.722441e-51 | -8.615850e-47 |
| Msa0156050 | Msa0590000 | 0.804568 | 2.029035e-49 | -8.615850e-47 |
| Msa0156090 | Msa0590000 | 0.812803 | 3.528022e-51 | -8.615850e-47 |
| Msa0166180 | Msa0590000 | 0.800900 | 1.160272e-48 | -8.615850e-47 |
| Msa0168380 | Msa0590000 | 0.830317 | 3.142931e-55 | -8.615850e-47 |
| Msa0173250 | Msa0590000 | 0.819843 | 9.384400e-53 | -8.615850e-47 |
| Msa0183710 | Msa0590000 | 0.801183 | 1.015580e-48 | -8.615850e-47 |
| Msa0184700 | Msa0590000 | 0.806035 | 1.000216e-49 | -8.615850e-47 |
| Msa0203080 | Msa0590000 | 0.815945 | 7.125337e-52 | -8.615850e-47 |
| Msa0206370 | Msa0590000 | 0.840337 | 9.238928e-58 | -8.615850e-47 |
| Msa0211460 | Msa0590000 | 0.824045 | 9.983666e-54 | -8.615850e-47 |
| Msa0369040 | Msa0590000 | 0.828069 | 1.103369e-54 | -8.615850e-47 |
| Msa0386880 | Msa0590000 | 0.804838 | 1.782154e-49 | -8.615850e-47 |
| Msa0388250 | Msa0590000 | 0.815293 | 9.956652e-52 | -8.615850e-47 |
| Msa0401060 | Msa0590000 | 0.843632 | 1.243620e-58 | -8.615850e-47 |
| Msa0422820 | Msa0590000 | 0.807678 | 4.494203e-50 | -8.615850e-47 |
| Msa0437480 | Msa0590000 | 0.815159 | 1.066334e-51 | -8.615850e-47 |
| Msa0468390 | Msa0590000 | 0.800637 | 1.312639e-48 | -8.615850e-47 |
| Msa0469060 | Msa0590000 | 0.813370 | 2.649516e-51 | -8.615850e-47 |
| Msa0238960 | Msa0590000 | -0.819794 | 9.630139e-53 | -8.615850e-47 |
| Msa0240540 | Msa0590000 | 0.808333 | 3.261338e-50 | -8.615850e-47 |
| Msa0276800 | Msa0590000 | -0.838324 | 3.077972e-57 | -8.615850e-47 |
| Msa0276850 | Msa0590000 | 0.811823 | 5.772720e-51 | -8.615850e-47 |
| Msa0276860 | Msa0590000 | 0.809614 | 1.734302e-50 | -8.615850e-47 |
| Msa0279000 | Msa0590000 | 0.804493 | 2.103399e-49 | -8.615850e-47 |
| Msa0284800 | Msa0590000 | 0.819658 | 1.034432e-52 | -8.615850e-47 |
| Msa0312740 | Msa0590000 | 0.804348 | 2.255057e-49 | -8.615850e-47 |
| Msa0316720 | Msa0590000 | -0.837030 | 6.609973e-57 | -8.615850e-47 |
| Msa0336430 | Msa0590000 | 0.810840 | 9.435886e-51 | -8.615850e-47 |
| Msa0336460 | Msa0590000 | 0.824471 | 7.927161e-54 | -8.615850e-47 |
| Msa0336520 | Msa0590000 | 0.817616 | 3.006132e-52 | -8.615850e-47 |
| Msa0354840 | Msa0590000 | 0.814090 | 1.839179e-51 | -8.615850e-47 |
| Msa0504720 | Msa0590000 | 0.810044 | 1.401414e-50 | -8.615850e-47 |
| Msa0514020 | Msa0590000 | 0.804791 | 1.823609e-49 | -8.615850e-47 |
| Msa0521510 | Msa0590000 | 0.804307 | 2.300295e-49 | -8.615850e-47 |
| Msa0521610 | Msa0590000 | 0.800920 | 1.149131e-48 | -8.615850e-47 |
| Msa0526150 | Msa0590000 | 0.810113 | 1.354780e-50 | -8.615850e-47 |
| Msa0527850 | Msa0590000 | 0.813747 | 2.188783e-51 | -8.615850e-47 |
| Msa0533990 | Msa0590000 | 0.994689 | 2.366594e-209 | -8.615850e-47 |
| Msa0541740 | Msa0590000 | 0.801143 | 1.034871e-48 | -8.615850e-47 |
| Msa0549970 | Msa0590000 | 0.802525 | 5.381929e-49 | -8.615850e-47 |
| Msa0567330 | Msa0590000 | 0.848460 | 6.045247e-60 | -8.615850e-47 |
| Msa0567570 | Msa0590000 | 0.853733 | 1.965908e-61 | -8.615850e-47 |
| Msa0568290 | Msa0590000 | -0.810050 | 1.397588e-50 | -8.615850e-47 |
| Msa0568460 | Msa0590000 | -0.806563 | 7.743025e-50 | -8.615850e-47 |
| Msa0572830 | Msa0590000 | 0.806687 | 7.288543e-50 | -8.615850e-47 |
| Msa0576320 | Msa0590000 | 0.847334 | 1.235273e-59 | -8.615850e-47 |
| Msa0582460 | Msa0590000 | 0.821563 | 3.778491e-53 | -8.615850e-47 |
| Msa0586200 | Msa0590000 | 0.821152 | 4.699768e-53 | -8.615850e-47 |
| Msa0590000 | Msa0630440 | 0.871260 | 7.828200e-67 | -8.615850e-47 |
| Msa0590000 | Msa0642550 | 0.818074 | 2.369664e-52 | -8.615850e-47 |
| Msa0590000 | Msa0646440 | 0.807139 | 5.847473e-50 | -8.615850e-47 |
| Msa0590000 | Msa0647440 | 0.812307 | 4.528962e-51 | -8.615850e-47 |
| Msa0590000 | Msa0648040 | 0.810157 | 1.325493e-50 | -8.615850e-47 |
| Msa0590000 | Msa0657210 | 0.800997 | 1.108169e-48 | -8.615850e-47 |
| Msa0590000 | Msa0660090 | 0.809423 | 1.905919e-50 | -8.615850e-47 |
| Msa0590000 | Msa0661480 | 0.808986 | 2.365372e-50 | -8.615850e-47 |
| Msa0590000 | Msa0663290 | 0.825405 | 4.773366e-54 | -8.615850e-47 |
| Msa0590000 | Msa0664070 | 0.828815 | 7.287322e-55 | -8.615850e-47 |
| Msa0590000 | Msa0690740 | 0.811360 | 7.280397e-51 | -8.615850e-47 |
| Msa0590000 | Msa0701250 | 0.800101 | 1.687734e-48 | -8.615850e-47 |
| Msa0590000 | Msa0708020 | 0.829255 | 5.702328e-55 | -8.615850e-47 |
| Msa0590000 | Msa0713080 | 0.839045 | 2.003509e-57 | -8.615850e-47 |
| Msa0590000 | Msa0719270 | 0.805976 | 1.029119e-49 | -8.615850e-47 |
| Msa0590000 | Msa0745140 | 0.807334 | 5.316738e-50 | -8.615850e-47 |
| Msa0590000 | Msa0772220 | 0.819206 | 1.312030e-52 | -8.615850e-47 |
| Msa0590000 | Msa0776640 | 0.809131 | 2.201527e-50 | -8.615850e-47 |
| Msa0590000 | Msa0825920 | 0.810408 | 1.170114e-50 | -8.615850e-47 |
| Msa0590000 | Msa0851760 | 0.806063 | 9.867766e-50 | -8.615850e-47 |
| Msa0590000 | Msa0865420 | 0.806083 | 9.772084e-50 | -8.615850e-47 |
| Msa0590000 | Msa0866530 | 0.803076 | 4.142348e-49 | -8.615850e-47 |
| Msa0590000 | Msa0870020 | 0.826699 | 2.351092e-54 | -8.615850e-47 |
| Msa0590000 | Msa0879920 | 0.800437 | 1.441760e-48 | -8.615850e-47 |
| Msa0590000 | Msa0880910 | 0.813679 | 2.265336e-51 | -8.615850e-47 |
| Msa0590000 | Msa0903340 | 0.815539 | 8.780104e-52 | -8.615850e-47 |
| Msa0590000 | Msa0909260 | 0.809476 | 1.856858e-50 | -8.615850e-47 |
| Msa0590000 | Msa0930040 | 0.803869 | 2.836688e-49 | -8.615850e-47 |
| Msa0590000 | Msa0945900 | 0.802722 | 4.901291e-49 | -8.615850e-47 |
| Msa0590000 | Msa0967780 | 0.808183 | 3.510050e-50 | -8.615850e-47 |
| Msa0590000 | Msa1002640 | 0.812782 | 3.564737e-51 | -8.615850e-47 |
| Msa0590000 | Msa1019200 | 0.808983 | 2.368311e-50 | -8.615850e-47 |
| Msa0590000 | Msa1041060 | 0.805232 | 1.474376e-49 | -8.615850e-47 |
| Msa0590000 | Msa1042300 | 0.802586 | 5.230486e-49 | -8.615850e-47 |
| Msa0590000 | Msa1050260 | 0.801969 | 7.007200e-49 | -8.615850e-47 |
| Msa0590000 | Msa1104110 | 0.804568 | 2.029895e-49 | -8.615850e-47 |
| Msa0590000 | Msa1111910 | 0.813881 | 2.044615e-51 | -8.615850e-47 |
| Msa0590000 | Msa1147700 | 0.833739 | 4.485365e-56 | -8.615850e-47 |
| Msa0590000 | Msa1149910 | 0.817618 | 3.003041e-52 | -8.615850e-47 |
| Msa0590000 | Msa1183910 | 0.826336 | 2.868690e-54 | -8.615850e-47 |
| Msa0590000 | Msa1188340 | 0.813270 | 2.787146e-51 | -8.615850e-47 |
| Msa0590000 | Msa1192360 | 0.822059 | 2.900670e-53 | -8.615850e-47 |
| Msa0590000 | Msa1199850 | 0.815725 | 7.979220e-52 | -8.615850e-47 |
| Msa0590000 | Msa1206040 | 0.847318 | 1.247958e-59 | -8.615850e-47 |
| Msa0590000 | Msa1217890 | 0.800080 | 1.704073e-48 | -8.615850e-47 |
| Msa0590000 | Msa1220720 | 0.800794 | 1.219150e-48 | -8.615850e-47 |
| Msa0590000 | Msa1240940 | 0.842392 | 2.659638e-58 | -8.615850e-47 |
| Msa0590000 | Msa1242130 | 0.802771 | 4.790120e-49 | -8.615850e-47 |
| Msa0590000 | Msa1246830 | 0.803551 | 3.302669e-49 | -8.615850e-47 |
| Msa0590000 | Msa1250610 | 0.810443 | 1.149603e-50 | -8.615850e-47 |
| Msa0590000 | Msa1250660 | 0.807533 | 4.825350e-50 | -8.615850e-47 |
| Msa0590000 | Msa1254100 | 0.814465 | 1.519503e-51 | -8.615850e-47 |
| Msa0590000 | Msa1255710 | 0.812691 | 3.733302e-51 | -8.615850e-47 |
| Msa0590000 | Msa1265570 | 0.810234 | 1.275610e-50 | -8.615850e-47 |
| Msa0590000 | Msa1267930 | 0.800919 | 1.149504e-48 | -8.615850e-47 |
| Msa0590000 | Msa1273320 | 0.814906 | 1.213511e-51 | -8.615850e-47 |
| Msa0590000 | Msa1282300 | 0.837192 | 6.009184e-57 | -8.615850e-47 |
| Msa0590000 | Msa1288070 | 0.823888 | 1.086972e-53 | -8.615850e-47 |
| Msa0590000 | Msa1294280 | 0.813187 | 2.906215e-51 | -8.615850e-47 |
| Msa0590000 | Msa1296860 | 0.805419 | 1.347179e-49 | -8.615850e-47 |
| Msa0590000 | Msa1297070 | 0.834571 | 2.775728e-56 | -8.615850e-47 |
| Msa0590000 | Msa1308850 | 0.800056 | 1.723648e-48 | -8.615850e-47 |
| Msa0590000 | Msa1322960 | 0.800779 | 1.228156e-48 | -8.615850e-47 |
| Msa0590000 | Msa1326640 | 0.803588 | 3.245117e-49 | -8.615850e-47 |
| Msa0590000 | Msa1326680 | 0.806959 | 6.386299e-50 | -8.615850e-47 |
| Msa0590000 | Msa1328870 | 0.843523 | 1.330185e-58 | -8.615850e-47 |
| Msa0590000 | Msa1334670 | 0.814946 | 1.189090e-51 | -8.615850e-47 |
| Msa0590000 | Msa1362590 | 0.813364 | 2.657743e-51 | -8.615850e-47 |
| Msa0590000 | Msa1365230 | 0.813692 | 2.250282e-51 | -8.615850e-47 |
| Msa0590000 | Msa1371800 | 0.807795 | 4.244041e-50 | -8.615850e-47 |
| Msa0590000 | Msa1376310 | 0.803326 | 3.677560e-49 | -8.615850e-47 |
| Msa0590000 | Msa1385570 | 0.820021 | 8.546564e-53 | -8.615850e-47 |
| Msa0590000 | Msa1387570 | 0.800001 | 1.768836e-48 | -8.615850e-47 |
| Msa0590000 | Msa1389820 | 0.823928 | 1.063553e-53 | -8.615850e-47 |
| Msa0590000 | Msa1393560 | 0.800535 | 1.376776e-48 | -8.615850e-47 |
| Msa0590000 | Msa1402010 | 0.812117 | 4.982448e-51 | -8.615850e-47 |
| Msa0590000 | Msa1405830 | 0.822080 | 2.868645e-53 | -8.615850e-47 |
| Msa0590000 | Msa1407810 | 0.853884 | 1.778533e-61 | -8.615850e-47 |
| Msa0590000 | Msa1433360 | 0.840017 | 1.119885e-57 | -8.615850e-47 |
| Msa0590000 | Msa1437780 | 0.853538 | 2.237070e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0590000 | MtrunA17_Chr4g0007371 | 99.113 | 451 | 2 | 1 | 1 | 449 | 1 | 451 | 0.0 | 936 |
| Msa0590000 | MtrunA17_Chr4g0008401 | 96.047 | 430 | 17 | 0 | 1 | 430 | 1 | 430 | 0.0 | 850 |
| Msa0590000 | MtrunA17_Chr4g0008361 | 95.814 | 430 | 18 | 0 | 1 | 430 | 1 | 430 | 0.0 | 848 |
| Msa0590000 | MtrunA17_Chr1g0203181 | 95.814 | 430 | 18 | 0 | 1 | 430 | 1 | 430 | 0.0 | 848 |
| Msa0590000 | MtrunA17_Chr4g0051631 | 95.116 | 430 | 21 | 0 | 1 | 430 | 1 | 430 | 0.0 | 842 |
| Msa0590000 | MtrunA17_Chr2g0292921 | 94.884 | 430 | 22 | 0 | 1 | 430 | 1 | 430 | 0.0 | 841 |
| Msa0590000 | MtrunA17_Chr7g0255791 | 94.419 | 430 | 24 | 0 | 1 | 430 | 1 | 430 | 0.0 | 837 |
| Msa0590000 | MtrunA17_Chr3g0142731 | 93.056 | 432 | 28 | 1 | 1 | 430 | 1 | 432 | 0.0 | 825 |
| Msa0590000 | MtrunA17_Chr8g0386781 | 90.698 | 430 | 40 | 0 | 1 | 430 | 1 | 430 | 0.0 | 816 |
| Msa0590000 | MtrunA17_Chr8g0393021 | 90.271 | 442 | 40 | 2 | 1 | 439 | 1 | 442 | 0.0 | 814 |
| Msa0590000 | MtrunA17_Chr8g0378821 | 41.705 | 434 | 243 | 2 | 1 | 424 | 1 | 434 | 8.66e-126 | 372 |
| Msa0590000 | MtrunA17_Chr3g0140821 | 41.705 | 434 | 243 | 2 | 1 | 424 | 1 | 434 | 1.35e-124 | 369 |
| Msa0590000 | MtrunA17_Chr1g0206881 | 41.203 | 449 | 251 | 3 | 1 | 439 | 1 | 446 | 3.70e-124 | 368 |
| Msa0590000 | MtrunA17_Chr7g0253411 | 40.783 | 434 | 247 | 2 | 1 | 424 | 1 | 434 | 7.16e-124 | 367 |
| Msa0590000 | MtrunA17_Chr4g0054511 | 41.244 | 434 | 245 | 2 | 1 | 424 | 1 | 434 | 1.49e-122 | 364 |
| Msa0590000 | MtrunA17_Chr6g0461281 | 40.393 | 458 | 252 | 3 | 1 | 447 | 1 | 448 | 1.94e-122 | 363 |
| Msa0590000 | MtrunA17_Chr2g0300671 | 37.727 | 440 | 261 | 4 | 1 | 431 | 1 | 436 | 2.59e-101 | 309 |
| Msa0590000 | MtrunA17_Chr2g0300491 | 36.889 | 450 | 273 | 3 | 1 | 442 | 1 | 447 | 1.53e-99 | 306 |
| Msa0590000 | MtrunA17_Chr7g0275431 | 36.073 | 438 | 263 | 7 | 2 | 423 | 3 | 439 | 4.53e-99 | 305 |
| Msa0590000 | MtrunA17_Chr3g0109241 | 32.593 | 135 | 83 | 1 | 269 | 395 | 4 | 138 | 1.01e-21 | 91.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0590000 | AT5G62690.1 | 96.744 | 430 | 14 | 0 | 1 | 430 | 1 | 430 | 0.0 | 854 |
| Msa0590000 | AT5G62700.1 | 96.744 | 430 | 14 | 0 | 1 | 430 | 1 | 430 | 0.0 | 854 |
| Msa0590000 | AT5G23860.2 | 96.047 | 430 | 17 | 0 | 1 | 430 | 1 | 430 | 0.0 | 848 |
| Msa0590000 | AT5G23860.1 | 96.047 | 430 | 17 | 0 | 1 | 430 | 1 | 430 | 0.0 | 848 |
| Msa0590000 | AT2G29550.1 | 95.360 | 431 | 20 | 0 | 1 | 431 | 1 | 431 | 0.0 | 843 |
| Msa0590000 | AT1G75780.1 | 94.432 | 431 | 23 | 1 | 1 | 430 | 1 | 431 | 0.0 | 838 |
| Msa0590000 | AT5G12250.1 | 93.953 | 430 | 26 | 0 | 1 | 430 | 1 | 430 | 0.0 | 836 |
| Msa0590000 | AT4G20890.1 | 94.186 | 430 | 25 | 0 | 1 | 430 | 1 | 430 | 0.0 | 834 |
| Msa0590000 | AT5G44340.1 | 93.953 | 430 | 26 | 0 | 1 | 430 | 1 | 430 | 0.0 | 831 |
| Msa0590000 | AT1G20010.1 | 93.271 | 431 | 28 | 1 | 1 | 430 | 1 | 431 | 0.0 | 828 |
| Msa0590000 | AT1G64740.1 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 5.53e-126 | 373 |
| Msa0590000 | AT5G19780.1 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 2.01e-125 | 372 |
| Msa0590000 | AT5G19770.1 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 2.01e-125 | 372 |
| Msa0590000 | AT4G14960.2 | 41.781 | 438 | 242 | 3 | 1 | 428 | 1 | 435 | 2.22e-122 | 364 |
| Msa0590000 | AT1G50010.1 | 41.553 | 438 | 243 | 3 | 1 | 428 | 1 | 435 | 1.45e-121 | 362 |
| Msa0590000 | AT1G04820.1 | 41.553 | 438 | 243 | 3 | 1 | 428 | 1 | 435 | 1.45e-121 | 362 |
| Msa0590000 | AT4G14960.1 | 41.710 | 386 | 215 | 2 | 1 | 376 | 1 | 386 | 4.29e-104 | 316 |
| Msa0590000 | AT3G61650.1 | 35.011 | 457 | 278 | 8 | 2 | 442 | 3 | 456 | 5.63e-98 | 302 |
| Msa0590000 | AT5G05620.1 | 35.616 | 438 | 265 | 7 | 2 | 423 | 3 | 439 | 9.04e-98 | 301 |
Find 142 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATGCTGTAAAATTGATTT+TGG | 0.164016 | 4_2:+13372764 | Msa0590000:three_prime_UTR |
| AAGAAGGTTGAAATGAAATT+TGG | 0.190671 | 4_2:-13370158 | None:intergenic |
| ATCAAATCGGAGCAAAATTC+TGG | 0.214456 | 4_2:+13370272 | Msa0590000:CDS |
| CACTCACTTGGTGGAGGAAC+TGG | 0.264774 | 4_2:+13371653 | Msa0590000:CDS |
| TGGAATCCATTCCACAAAAT+AGG | 0.297243 | 4_2:-13372359 | None:intergenic |
| ACAGTAGACTTGACATTGTT+TGG | 0.300254 | 4_2:-13372379 | None:intergenic |
| AGAGTGGTGCTGGGAATAAC+TGG | 0.311077 | 4_2:+13370512 | Msa0590000:CDS |
| ACTGCTTCAGCCATGTTTAG+AGG | 0.311640 | 4_2:+13372277 | Msa0590000:CDS |
| AAAATGGCTTCAACATTCAT+TGG | 0.324788 | 4_2:+13372427 | Msa0590000:CDS |
| AGAAGGTTGAAATGAAATTT+GGG | 0.333106 | 4_2:-13370157 | None:intergenic |
| GGATCTTGAACCGGGTACTA+TGG | 0.338256 | 4_2:+13370429 | Msa0590000:CDS |
| TGTTCCGAGAGCGGTTCTTA+TGG | 0.339518 | 4_2:+13370408 | Msa0590000:CDS |
| TGGAAACTCCACATCCATTC+AGG | 0.349700 | 4_2:+13372447 | Msa0590000:CDS |
| GTGTTTGGTCAGAGTGGTGC+TGG | 0.360890 | 4_2:+13370502 | Msa0590000:CDS |
| TGAGAATTGTGATTGCTTGC+AGG | 0.369709 | 4_2:+13370603 | Msa0590000:CDS |
| CACTGCTATGTTCAGGAGAA+AGG | 0.380989 | 4_2:+13372498 | Msa0590000:CDS |
| GTCAGCTTAACTCTGATCTT+AGG | 0.393922 | 4_2:+13372074 | Msa0590000:CDS |
| AATAGGAGGAGTTCTTGTTC+TGG | 0.394999 | 4_2:-13372342 | None:intergenic |
| CACTTAGAGTCCTGTACTGC+TGG | 0.395756 | 4_2:-13372177 | None:intergenic |
| CTTGGTGGAGGAACTGGGTC+TGG | 0.396498 | 4_2:+13371659 | Msa0590000:CDS |
| TGTGAGTGTGAGAGAGGGTT+TGG | 0.397717 | 4_2:-13370112 | None:intergenic |
| AGCAGCACACATCATGTTCT+TGG | 0.404220 | 4_2:-13372230 | None:intergenic |
| ACCTGTTGTTTGAGGTTCCC+TGG | 0.407604 | 4_2:+13372052 | Msa0590000:CDS |
| GGTTCTTATGGATCTTGAAC+CGG | 0.408619 | 4_2:+13370420 | Msa0590000:CDS |
| ATTCTGTTCTTGATGTTGTT+AGG | 0.411260 | 4_2:+13370572 | Msa0590000:CDS |
| GGATGAGTATGGAGAGGAAG+AGG | 0.417641 | 4_2:+13372639 | Msa0590000:CDS |
| AAAGTAAGCATCATCCTGTC+TGG | 0.418443 | 4_2:-13371722 | None:intergenic |
| GAAATGAAAATTTGTGAAGA+AGG | 0.419340 | 4_2:-13370174 | None:intergenic |
| GGTTGGATCGATTCCATGTT+CGG | 0.419355 | 4_2:-13370308 | None:intergenic |
| CATTTGTTCATCAACCTCCT+TGG | 0.421209 | 4_2:-13372311 | None:intergenic |
| CTCCGATTTGATTACCGCAT+TGG | 0.423800 | 4_2:-13370261 | None:intergenic |
| GCTGGGAATAACTGGGCAAA+AGG | 0.423808 | 4_2:+13370520 | Msa0590000:CDS |
| CACATTTGTTGAGTGAGCTC+AGG | 0.431352 | 4_2:-13372202 | None:intergenic |
| AACAATTCACTGCTATGTTC+AGG | 0.434258 | 4_2:+13372491 | Msa0590000:CDS |
| CCTCATCAGCGGTGGCATCT+TGG | 0.436615 | 4_2:-13372618 | None:intergenic |
| ACCGCTGATGAGGATGAGTA+TGG | 0.442177 | 4_2:+13372628 | Msa0590000:CDS |
| AACAGAGAGGGTAGCATTGT+AGG | 0.442752 | 4_2:-13371789 | None:intergenic |
| CTGATATCAGCAACCATGTC+TGG | 0.452086 | 4_2:+13372025 | Msa0590000:CDS |
| GGAGGAACTGGGTCTGGAAT+GGG | 0.456477 | 4_2:+13371665 | Msa0590000:CDS |
| CTGGTGTCACCTGTTGTTTG+AGG | 0.465900 | 4_2:+13372044 | Msa0590000:CDS |
| TCCTGTACTGCTGGGAGCCA+CGG | 0.467863 | 4_2:-13372168 | None:intergenic |
| TGGAGAGGAAGAGGGTGAAG+AGG | 0.473975 | 4_2:+13372648 | Msa0590000:CDS |
| GGAGAAAGGCTTTCTTGCAT+TGG | 0.478824 | 4_2:+13372512 | Msa0590000:CDS |
| TGAATCACCGGTGTAGCGTC+CGG | 0.479982 | 4_2:-13370329 | None:intergenic |
| ACCAGGGAACCTCAAACAAC+AGG | 0.480075 | 4_2:-13372053 | None:intergenic |
| GGCCAATGCGGTAATCAAAT+CGG | 0.484414 | 4_2:+13370259 | Msa0590000:CDS |
| GTGAGGTATCGCCCATGCCT+AGG | 0.488888 | 4_2:-13372256 | None:intergenic |
| CGGAGCAAAATTCTGGGAAG+TGG | 0.489877 | 4_2:+13370279 | Msa0590000:CDS |
| CCCGTGGCTCCCAGCAGTAC+AGG | 0.489965 | 4_2:+13372167 | Msa0590000:CDS |
| TTGATGTGACCTGTTGGTAG+TGG | 0.497914 | 4_2:+13372797 | Msa0590000:three_prime_UTR |
| GATGAGTATGGAGAGGAAGA+GGG | 0.503164 | 4_2:+13372640 | Msa0590000:CDS |
| ACTCACTTGGTGGAGGAACT+GGG | 0.505509 | 4_2:+13371654 | Msa0590000:CDS |
| GCTTTCTTGCATTGGTACAC+TGG | 0.506815 | 4_2:+13372520 | Msa0590000:CDS |
| CCTGTACTGCTGGGAGCCAC+GGG | 0.507415 | 4_2:-13372167 | None:intergenic |
| CAGAAGAACATGTCACAAGA+TGG | 0.507580 | 4_2:-13372960 | None:intergenic |
| TGGAGGAACTGGGTCTGGAA+TGG | 0.508835 | 4_2:+13371664 | Msa0590000:CDS |
| TGTGCTGCTGACCCTAGGCA+TGG | 0.509772 | 4_2:+13372244 | Msa0590000:CDS |
| TGTCTTTCTCCACTACCAAC+AGG | 0.510299 | 4_2:-13372806 | None:intergenic |
| TGACCAAACACAAAATTATC+CGG | 0.511815 | 4_2:-13370490 | None:intergenic |
| CAAGTATGCCACTCACTTGG+TGG | 0.517337 | 4_2:+13371644 | Msa0590000:CDS |
| TCAAATCGGAGCAAAATTCT+GGG | 0.518022 | 4_2:+13370273 | Msa0590000:CDS |
| TGAGAGTGTGAGTGTGAGAG+AGG | 0.522101 | 4_2:-13370118 | None:intergenic |
| AGATCAGAGTTAAGCTGACC+AGG | 0.523471 | 4_2:-13372070 | None:intergenic |
| CCTACGGAACATTTCCTGAA+TGG | 0.523804 | 4_2:-13372461 | None:intergenic |
| TTGCATTGGTACACTGGTGA+AGG | 0.524227 | 4_2:+13372526 | Msa0590000:CDS |
| TTTCAAGTATGCCACTCACT+TGG | 0.530375 | 4_2:+13371641 | Msa0590000:CDS |
| CGGGTACTATGGATAGTATC+CGG | 0.537467 | 4_2:+13370440 | Msa0590000:CDS |
| GAAGTGGTTTGCGCCGAACA+TGG | 0.540201 | 4_2:+13370295 | Msa0590000:CDS |
| ACTATGGATAGTATCCGGTC+TGG | 0.540371 | 4_2:+13370445 | Msa0590000:CDS |
| CTGAGCTCACTCAACAAATG+TGG | 0.540387 | 4_2:+13372203 | Msa0590000:CDS |
| GCTCATCTTGCCTCTAAACA+TGG | 0.543181 | 4_2:-13372287 | None:intergenic |
| GAACATTTCCTGAATGGATG+TGG | 0.547117 | 4_2:-13372455 | None:intergenic |
| CTGGGAATAACTGGGCAAAA+GGG | 0.547182 | 4_2:+13370521 | Msa0590000:CDS |
| ACAGAGAGGGTAGCATTGTA+GGG | 0.548602 | 4_2:-13371788 | None:intergenic |
| ATCGTAGAATTTATTAACTG+TGG | 0.549899 | 4_2:+13372891 | Msa0590000:three_prime_UTR |
| CCAAGATGCCACCGCTGATG+AGG | 0.550130 | 4_2:+13372618 | Msa0590000:CDS |
| ATTCAGATCTTCAACTTGAA+CGG | 0.550491 | 4_2:+13370347 | Msa0590000:CDS |
| AGTATCCGGTCTGGACCGTA+TGG | 0.551849 | 4_2:+13370454 | Msa0590000:CDS |
| TGAGAGCAACATGAATGATC+TGG | 0.551963 | 4_2:+13372576 | Msa0590000:CDS |
| GAACATGGAATCGATCCAAC+CGG | 0.551983 | 4_2:+13370310 | Msa0590000:CDS |
| GAGAGTGTGAGTGTGAGAGA+GGG | 0.556844 | 4_2:-13370117 | None:intergenic |
| GTTCTTATGGATCTTGAACC+GGG | 0.556874 | 4_2:+13370421 | Msa0590000:CDS |
| GTGTCAGAAACCTTAGGAGA+AGG | 0.556885 | 4_2:-13371755 | None:intergenic |
| TGAGGTATCGCCCATGCCTA+GGG | 0.558978 | 4_2:-13372255 | None:intergenic |
| TGGTGAAGGCATGGACGAGA+TGG | 0.560351 | 4_2:+13372540 | Msa0590000:CDS |
| TGATGTGTGCTGCTGACCCT+AGG | 0.561458 | 4_2:+13372239 | Msa0590000:CDS |
| GAGAATTGTGATTGCTTGCA+GGG | 0.561746 | 4_2:+13370604 | Msa0590000:CDS |
| CCATTCAGGAAATGTTCCGT+AGG | 0.563699 | 4_2:+13372461 | Msa0590000:CDS |
| TGTTTGGTCAGAGTGGTGCT+GGG | 0.566395 | 4_2:+13370503 | Msa0590000:CDS |
| TCAGGGAAGAATACCCAGAC+AGG | 0.570015 | 4_2:+13371708 | Msa0590000:CDS |
| ACATTTGTTGAGTGAGCTCA+GGG | 0.571976 | 4_2:-13372201 | None:intergenic |
| GATTACCGCATTGGCCACCT+TGG | 0.572205 | 4_2:-13370252 | None:intergenic |
| TCACCGGTGTAGCGTCCGGT+TGG | 0.574212 | 4_2:-13370325 | None:intergenic |
| GCGGAAGCAAATGTCATACA+AGG | 0.580969 | 4_2:-13371861 | None:intergenic |
| AGATCCATAAGAACCGCTCT+CGG | 0.582689 | 4_2:-13370412 | None:intergenic |
| CGTCAAATTCTTCACATCCA+AGG | 0.585397 | 4_2:+13370235 | Msa0590000:CDS |
| TGAGCTCACTCAACAAATGT+GGG | 0.585971 | 4_2:+13372204 | Msa0590000:CDS |
| AAGTAAGCATCATCCTGTCT+GGG | 0.586190 | 4_2:-13371721 | None:intergenic |
| ACCACGGTGTCAGAAACCTT+AGG | 0.586612 | 4_2:-13371761 | None:intergenic |
| TGGAAGATTTGTTCCGAGAG+CGG | 0.586683 | 4_2:+13370399 | Msa0590000:CDS |
| TTTGCTCCGTTGACTTCCCG+TGG | 0.590682 | 4_2:+13372151 | Msa0590000:CDS |
| TCCTAAGGTTTCTGACACCG+TGG | 0.591848 | 4_2:+13371760 | Msa0590000:CDS |
| AGAAGAACATGTCACAAGAT+GGG | 0.594643 | 4_2:-13372959 | None:intergenic |
| AACAAGCTGGTGAACAGAGA+GGG | 0.596692 | 4_2:-13371801 | None:intergenic |
| TGTCAGAAACCTTAGGAGAA+GGG | 0.599265 | 4_2:-13371754 | None:intergenic |
| TGGGAGCCACGGGAAGTCAA+CGG | 0.600459 | 4_2:-13372157 | None:intergenic |
| GATTGCTGAGCTTCAAAATG+CGG | 0.606039 | 4_2:-13371880 | None:intergenic |
| AAGTTGAAGATCTGAATCAC+CGG | 0.607154 | 4_2:-13370341 | None:intergenic |
| TGAATTGTTCACTCACCCTA+CGG | 0.607184 | 4_2:-13372477 | None:intergenic |
| TTGGTACACTGGTGAAGGCA+TGG | 0.610557 | 4_2:+13372531 | Msa0590000:CDS |
| AATCCATTCCACAAAATAGG+AGG | 0.611691 | 4_2:-13372356 | None:intergenic |
| TCTGACCATACGGTCCAGAC+CGG | 0.612759 | 4_2:-13370459 | None:intergenic |
| CATTCAGGAAATGTTCCGTA+GGG | 0.612874 | 4_2:+13372462 | Msa0590000:CDS |
| ACTTAGAGTCCTGTACTGCT+GGG | 0.613311 | 4_2:-13372176 | None:intergenic |
| GCTTGTTGAAAATGCAGATG+AGG | 0.614968 | 4_2:+13371817 | Msa0590000:CDS |
| GATCCAACCGGACGCTACAC+CGG | 0.618066 | 4_2:+13370322 | Msa0590000:CDS |
| GTATGGTCAGATCTTTAGAC+CGG | 0.619894 | 4_2:+13370471 | Msa0590000:CDS |
| GCAAAAGGGCATTATACTGA+AGG | 0.620923 | 4_2:+13370535 | Msa0590000:CDS |
| GGTCTAAAGATCTGACCATA+CGG | 0.621130 | 4_2:-13370469 | None:intergenic |
| CACATCCAAGGTGGCCAATG+CGG | 0.624440 | 4_2:+13370247 | Msa0590000:CDS |
| GTGCTGCTGACCCTAGGCAT+GGG | 0.624521 | 4_2:+13372245 | Msa0590000:CDS |
| GAGTGGTGCTGGGAATAACT+GGG | 0.624747 | 4_2:+13370513 | Msa0590000:CDS |
| CAGTTCCTCCACCAAGTGAG+TGG | 0.625629 | 4_2:-13371652 | None:intergenic |
| CGGATACTATCCATAGTACC+CGG | 0.627540 | 4_2:-13370439 | None:intergenic |
| TGAAAATGCAGATGAGGTCA+TGG | 0.629240 | 4_2:+13371823 | Msa0590000:CDS |
| GTATGCCACTCACTTGGTGG+AGG | 0.629569 | 4_2:+13371647 | Msa0590000:CDS |
| TCCATACTCATCCTCATCAG+CGG | 0.637103 | 4_2:-13372629 | None:intergenic |
| CAACAAGCTGGTGAACAGAG+AGG | 0.644239 | 4_2:-13371802 | None:intergenic |
| TGACATGTGATCTTGAATGA+AGG | 0.644561 | 4_2:+13372684 | Msa0590000:exon |
| ACAACAGGTGACACCAGACA+TGG | 0.645746 | 4_2:-13372038 | None:intergenic |
| ATACTCATCCTCATCAGCGG+TGG | 0.651736 | 4_2:-13372626 | None:intergenic |
| ACAGTTAATAAATTCTACGA+TGG | 0.654518 | 4_2:-13372889 | None:intergenic |
| TATTACAATGAAGCAAGTGG+TGG | 0.660724 | 4_2:+13370379 | Msa0590000:CDS |
| GATCAGAGTTAAGCTGACCA+GGG | 0.663223 | 4_2:-13372069 | None:intergenic |
| TGATGAGGATGAGTATGGAG+AGG | 0.668397 | 4_2:+13372633 | Msa0590000:CDS |
| TAGAGGCAAGATGAGCACCA+AGG | 0.693808 | 4_2:+13372294 | Msa0590000:CDS |
| CAAATTCTTCACATCCAAGG+TGG | 0.706919 | 4_2:+13370238 | Msa0590000:CDS |
| TAAACATGGCTGAAGCAGTG+AGG | 0.710604 | 4_2:-13372273 | None:intergenic |
| AGGCAAGATGAGCACCAAGG+AGG | 0.712769 | 4_2:+13372297 | Msa0590000:CDS |
| GTGTATTACAATGAAGCAAG+TGG | 0.718256 | 4_2:+13370376 | Msa0590000:CDS |
| AGCATTGTAGGGTTCAACCA+CGG | 0.721451 | 4_2:-13371777 | None:intergenic |
| GGACGAGATGGAATTCACTG+AGG | 0.754042 | 4_2:+13372552 | Msa0590000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAACTTGTTTTGAAATTT+AGG | + | chr4_2:13370741-13370760 | Msa0590000:intron | 15.0% |
| !!! | TTAACTTGTTTTGAAATTTA+GGG | + | chr4_2:13370742-13370761 | Msa0590000:intron | 15.0% |
| !!! | ATTTGTTTCTGATTTATTTA+TGG | + | chr4_2:13370974-13370993 | Msa0590000:intron | 15.0% |
| !!! | TTTGTTTCTGATTTATTTAT+GGG | + | chr4_2:13370975-13370994 | Msa0590000:intron | 15.0% |
| !!! | TTTTGAACTTTTGTGATTTT+AGG | + | chr4_2:13370641-13370660 | Msa0590000:intron | 20.0% |
| !!! | TTTGAACTTTTGTGATTTTA+GGG | + | chr4_2:13370642-13370661 | Msa0590000:intron | 20.0% |
| !!! | TGTTGATTTTTTTGGATTTA+TGG | + | chr4_2:13370885-13370904 | Msa0590000:intron | 20.0% |
| !!! | TCTAACTTGTTTTGAAATTT+AGG | + | chr4_2:13371014-13371033 | Msa0590000:intron | 20.0% |
| !!! | TTGGTTTTTATAGAGGAAAT+GGG | - | chr4_2:13370096-13370115 | None:intergenic | 25.0% |
| !!! | TTTGGTTTTTATAGAGGAAA+TGG | - | chr4_2:13370097-13370116 | None:intergenic | 25.0% |
| ! | AGAAGGTTGAAATGAAATTT+GGG | - | chr4_2:13370160-13370179 | None:intergenic | 25.0% |
| ! | AAGAAGGTTGAAATGAAATT+TGG | - | chr4_2:13370161-13370180 | None:intergenic | 25.0% |
| ! | GAAATGAAAATTTGTGAAGA+AGG | - | chr4_2:13370177-13370196 | None:intergenic | 25.0% |
| !! | CTTCACAAATTTTCATTTCT+AGG | + | chr4_2:13370178-13370197 | Msa0590000:five_prime_UTR | 25.0% |
| !!! | ATTTGACGCATTTTGAAAAA+GGG | - | chr4_2:13370223-13370242 | None:intergenic | 25.0% |
| !!! | AATTTGACGCATTTTGAAAA+AGG | - | chr4_2:13370224-13370243 | None:intergenic | 25.0% |
| !!! | TAGGGTTTTGTTGATTTTTT+TGG | + | chr4_2:13370877-13370896 | Msa0590000:intron | 25.0% |
| !!! | TTTGTTGATTTATGTGTTGA+TGG | + | chr4_2:13371191-13371210 | Msa0590000:intron | 25.0% |
| !!! | ATGTGTTTTTATACAGTTGT+GGG | + | chr4_2:13371261-13371280 | Msa0590000:intron | 25.0% |
| ! | AGTTAACAATTAACAGTTCA+TGG | - | chr4_2:13371496-13371515 | None:intergenic | 25.0% |
| !!! | GTTAACTTGTCTTTGAAATT+TGG | + | chr4_2:13371509-13371528 | Msa0590000:intron | 25.0% |
| !!! | TGTCTTTGAAATTTGGTTTT+AGG | + | chr4_2:13371516-13371535 | Msa0590000:intron | 25.0% |
| !!! | GTCTTTGAAATTTGGTTTTA+GGG | + | chr4_2:13371517-13371536 | Msa0590000:intron | 25.0% |
| !!! | TTGTGTGCTTTTTTTATGTA+AGG | + | chr4_2:13371550-13371569 | Msa0590000:intron | 25.0% |
| !!! | TGTGTGCTTTTTTTATGTAA+GGG | + | chr4_2:13371551-13371570 | Msa0590000:intron | 25.0% |
| !!! | TCTTTTGATTTCAAAGATCA+GGG | + | chr4_2:13371691-13371710 | Msa0590000:CDS | 25.0% |
| !!! | CTATGCTGTAAAATTGATTT+TGG | + | chr4_2:13372764-13372783 | Msa0590000:three_prime_UTR | 25.0% |
| ! | ACAGTTAATAAATTCTACGA+TGG | - | chr4_2:13372892-13372911 | None:intergenic | 25.0% |
| ! | ATCGTAGAATTTATTAACTG+TGG | + | chr4_2:13372891-13372910 | Msa0590000:three_prime_UTR | 25.0% |
| ! | TGGTTTTTATAGAGGAAATG+GGG | - | chr4_2:13370095-13370114 | None:intergenic | 30.0% |
| !! | ATTTGGGTTTTCGATTTCTA+GGG | - | chr4_2:13370144-13370163 | None:intergenic | 30.0% |
| !! | AATTTGGGTTTTCGATTTCT+AGG | - | chr4_2:13370145-13370164 | None:intergenic | 30.0% |
| ATTCAGATCTTCAACTTGAA+CGG | + | chr4_2:13370347-13370366 | Msa0590000:CDS | 30.0% | |
| TGACCAAACACAAAATTATC+CGG | - | chr4_2:13370493-13370512 | None:intergenic | 30.0% | |
| ATTCTGTTCTTGATGTTGTT+AGG | + | chr4_2:13370572-13370591 | Msa0590000:CDS | 30.0% | |
| !! | GTGTTTTTGTAGTGTTTTGT+CGG | + | chr4_2:13370683-13370702 | Msa0590000:intron | 30.0% |
| ! | TTTGTGGGTGATTTTTGTAA+TGG | + | chr4_2:13370841-13370860 | Msa0590000:intron | 30.0% |
| ! | TTGTGGGTGATTTTTGTAAT+GGG | + | chr4_2:13370842-13370861 | Msa0590000:intron | 30.0% |
| !!! | TGATTTTTGTAATGGGTATG+TGG | + | chr4_2:13370849-13370868 | Msa0590000:intron | 30.0% |
| !! | TGCTTTTCATAGAGTTTTGT+GGG | + | chr4_2:13371115-13371134 | Msa0590000:intron | 30.0% |
| ! | TTTGTGGGTGATTTTTGTAA+TGG | + | chr4_2:13370841-13370860 | Msa0590000:intron | 30.0% |
| ! | TTGTGGGTGATTTTTGTAAT+GGG | + | chr4_2:13370842-13370861 | Msa0590000:intron | 30.0% |
| !! | CATGTGTTTTTATACAGTTG+TGG | + | chr4_2:13371260-13371279 | Msa0590000:intron | 30.0% |
| ! | TTGTGGGTGATTTTTGTAAT+GGG | + | chr4_2:13370842-13370861 | Msa0590000:intron | 30.0% |
| !!! | GTGATTTTTGTAATGGGTAT+GGG | + | chr4_2:13370848-13370867 | Msa0590000:intron | 30.0% |
| !! | AAAGTGCTGATAGATTTGTT+AGG | + | chr4_2:13371350-13371369 | Msa0590000:intron | 30.0% |
| !! | AAGTGCTGATAGATTTGTTA+GGG | + | chr4_2:13371351-13371370 | Msa0590000:intron | 30.0% |
| !! | TAGATTTGTTAGGGTTTGTT+TGG | + | chr4_2:13371360-13371379 | Msa0590000:intron | 30.0% |
| !!! | GTGTGCTTTTTTTATGTAAG+GGG | + | chr4_2:13371552-13371571 | Msa0590000:intron | 30.0% |
| !!! | CTCTTTTGATTTCAAAGATC+AGG | + | chr4_2:13371690-13371709 | Msa0590000:CDS | 30.0% |
| ! | TGTTTGTTGAGTAATGTGTT+TGG | + | chr4_2:13371967-13371986 | Msa0590000:intron | 30.0% |
| !!! | GTAATGTGTTTGGTTTTATG+TGG | + | chr4_2:13371977-13371996 | Msa0590000:intron | 30.0% |
| AAAATGGCTTCAACATTCAT+TGG | + | chr4_2:13372427-13372446 | Msa0590000:CDS | 30.0% | |
| !!! | TAAGCATCACTTTTTGTTGT+TGG | + | chr4_2:13372845-13372864 | Msa0590000:three_prime_UTR | 30.0% |
| !!! | AGAGGGTTTGGTTTTTATAG+AGG | - | chr4_2:13370103-13370122 | None:intergenic | 35.0% |
| ATCAAATCGGAGCAAAATTC+TGG | + | chr4_2:13370272-13370291 | Msa0590000:CDS | 35.0% | |
| TCAAATCGGAGCAAAATTCT+GGG | + | chr4_2:13370273-13370292 | Msa0590000:CDS | 35.0% | |
| AAGTTGAAGATCTGAATCAC+CGG | - | chr4_2:13370344-13370363 | None:intergenic | 35.0% | |
| GTGTATTACAATGAAGCAAG+TGG | + | chr4_2:13370376-13370395 | Msa0590000:CDS | 35.0% | |
| TATTACAATGAAGCAAGTGG+TGG | + | chr4_2:13370379-13370398 | Msa0590000:CDS | 35.0% | |
| ! | AGACCGGATAATTTTGTGTT+TGG | + | chr4_2:13370487-13370506 | Msa0590000:CDS | 35.0% |
| ! | AATTTTGTGTTTGGTCAGAG+TGG | + | chr4_2:13370496-13370515 | Msa0590000:CDS | 35.0% |
| ! | TTTTTGTAGTGTTTTGTCGG+TGG | + | chr4_2:13370686-13370705 | Msa0590000:intron | 35.0% |
| ! | TTTGTCGGTGGTTTTTGTAA+TGG | + | chr4_2:13370698-13370717 | Msa0590000:intron | 35.0% |
| ! | TTGTCGGTGGTTTTTGTAAT+GGG | + | chr4_2:13370699-13370718 | Msa0590000:intron | 35.0% |
| !! | CATTGATTGAGAAGTGTTGA+TGG | + | chr4_2:13370768-13370787 | Msa0590000:intron | 35.0% |
| !!! | GAAGTGTTGAAGTGTTTTTG+TGG | + | chr4_2:13370815-13370834 | Msa0590000:intron | 35.0% |
| !! | AGTGTTTTTGTGGAGTTTTG+TGG | + | chr4_2:13370825-13370844 | Msa0590000:intron | 35.0% |
| !! | GTGTTTTTGTGGAGTTTTGT+GGG | + | chr4_2:13370826-13370845 | Msa0590000:intron | 35.0% |
| ! | TAATGGGTATGTGGTCATTT+AGG | + | chr4_2:13370858-13370877 | Msa0590000:intron | 35.0% |
| AATGGGTATGTGGTCATTTA+GGG | + | chr4_2:13370859-13370878 | Msa0590000:intron | 35.0% | |
| ! | TTTGAAGTGATGAAGTCTTG+TGG | + | chr4_2:13370923-13370942 | Msa0590000:intron | 35.0% |
| !!! | TGTACGTTTTGAAGTGTTGA+TGG | + | chr4_2:13371041-13371060 | Msa0590000:intron | 35.0% |
| ! | GTGCTTTTCATAGAGTTTTG+TGG | + | chr4_2:13371114-13371133 | Msa0590000:intron | 35.0% |
| ! | GTTGTGGGTGATTTTTGTAA+TGG | + | chr4_2:13371276-13371295 | Msa0590000:intron | 35.0% |
| !!! | GGTGATTTTTGTAATGGGTA+TGG | + | chr4_2:13370847-13370866 | Msa0590000:intron | 35.0% |
| TTGTAGTTGAACTTTCTGTG+TGG | + | chr4_2:13371404-13371423 | Msa0590000:intron | 35.0% | |
| ! | AACTTTCTGTGTGGTTTTCT+AGG | + | chr4_2:13371413-13371432 | Msa0590000:intron | 35.0% |
| ! | ACTTTCTGTGTGGTTTTCTA+GGG | + | chr4_2:13371414-13371433 | Msa0590000:intron | 35.0% |
| !! | GGTTAACTTTGATAGTGTTG+TGG | + | chr4_2:13371573-13371592 | Msa0590000:intron | 35.0% |
| GTTGTGGCTGATTATGAAAT+TGG | + | chr4_2:13371589-13371608 | Msa0590000:intron | 35.0% | |
| GGCTGATTATGAAATTGGTT+TGG | + | chr4_2:13371594-13371613 | Msa0590000:intron | 35.0% | |
| !! | TGTGTTTTATTGTTGTGTGC+AGG | + | chr4_2:13371617-13371636 | Msa0590000:intron | 35.0% |
| AAATAGCAAAGCTTACAGCT+TGG | - | chr4_2:13371905-13371924 | None:intergenic | 35.0% | |
| !!! | ATGTGTTTGGTTTTATGTGG+TGG | + | chr4_2:13371980-13371999 | Msa0590000:intron | 35.0% |
| AATCCATTCCACAAAATAGG+AGG | - | chr4_2:13372359-13372378 | None:intergenic | 35.0% | |
| TGGAATCCATTCCACAAAAT+AGG | - | chr4_2:13372362-13372381 | None:intergenic | 35.0% | |
| ACAGTAGACTTGACATTGTT+TGG | - | chr4_2:13372382-13372401 | None:intergenic | 35.0% | |
| AACAATTCACTGCTATGTTC+AGG | + | chr4_2:13372491-13372510 | Msa0590000:CDS | 35.0% | |
| TGACATGTGATCTTGAATGA+AGG | + | chr4_2:13372684-13372703 | Msa0590000:exon | 35.0% | |
| AGAAGAACATGTCACAAGAT+GGG | - | chr4_2:13372962-13372981 | None:intergenic | 35.0% | |
| !! | GTCATTGATCTTTTGCTGTA+TGG | + | chr4_2:13372990-13373009 | Msa0590000:three_prime_UTR | 35.0% |
| CGTCAAATTCTTCACATCCA+AGG | + | chr4_2:13370235-13370254 | Msa0590000:CDS | 40.0% | |
| CAAATTCTTCACATCCAAGG+TGG | + | chr4_2:13370238-13370257 | Msa0590000:CDS | 40.0% | |
| GGTTCTTATGGATCTTGAAC+CGG | + | chr4_2:13370420-13370439 | Msa0590000:CDS | 40.0% | |
| GTTCTTATGGATCTTGAACC+GGG | + | chr4_2:13370421-13370440 | Msa0590000:CDS | 40.0% | |
| GGTCTAAAGATCTGACCATA+CGG | - | chr4_2:13370472-13370491 | None:intergenic | 40.0% | |
| GTATGGTCAGATCTTTAGAC+CGG | + | chr4_2:13370471-13370490 | Msa0590000:CDS | 40.0% | |
| !! | GCAAAAGGGCATTATACTGA+AGG | + | chr4_2:13370535-13370554 | Msa0590000:CDS | 40.0% |
| TGAGAATTGTGATTGCTTGC+AGG | + | chr4_2:13370603-13370622 | Msa0590000:CDS | 40.0% | |
| GAGAATTGTGATTGCTTGCA+GGG | + | chr4_2:13370604-13370623 | Msa0590000:CDS | 40.0% | |
| ACCCTGCAAGCAATAACAAA+GGG | - | chr4_2:13371318-13371337 | None:intergenic | 40.0% | |
| TACCCTGCAAGCAATAACAA+AGG | - | chr4_2:13371319-13371338 | None:intergenic | 40.0% | |
| ! | TTGTTATTGCTTGCAGGGTA+TGG | + | chr4_2:13371319-13371338 | Msa0590000:intron | 40.0% |
| ! | TTTCAAGTATGCCACTCACT+TGG | + | chr4_2:13371641-13371660 | Msa0590000:CDS | 40.0% |
| AAGTAAGCATCATCCTGTCT+GGG | - | chr4_2:13371724-13371743 | None:intergenic | 40.0% | |
| AAAGTAAGCATCATCCTGTC+TGG | - | chr4_2:13371725-13371744 | None:intergenic | 40.0% | |
| TGTCAGAAACCTTAGGAGAA+GGG | - | chr4_2:13371757-13371776 | None:intergenic | 40.0% | |
| ! | CATCTGCATTTTCAACAAGC+TGG | - | chr4_2:13371817-13371836 | None:intergenic | 40.0% |
| ! | GCTTGTTGAAAATGCAGATG+AGG | + | chr4_2:13371817-13371836 | Msa0590000:CDS | 40.0% |
| TGAAAATGCAGATGAGGTCA+TGG | + | chr4_2:13371823-13371842 | Msa0590000:CDS | 40.0% | |
| GATTGCTGAGCTTCAAAATG+CGG | - | chr4_2:13371883-13371902 | None:intergenic | 40.0% | |
| GTCAGCTTAACTCTGATCTT+AGG | + | chr4_2:13372074-13372093 | Msa0590000:CDS | 40.0% | |
| ACCATGAAAAAGTGAAGACG+CGG | - | chr4_2:13372127-13372146 | None:intergenic | 40.0% | |
| !!! | CGTCTTCACTTTTTCATGGT+TGG | + | chr4_2:13372127-13372146 | Msa0590000:CDS | 40.0% |
| ! | ACATTTGTTGAGTGAGCTCA+GGG | - | chr4_2:13372204-13372223 | None:intergenic | 40.0% |
| TGAGCTCACTCAACAAATGT+GGG | + | chr4_2:13372204-13372223 | Msa0590000:CDS | 40.0% | |
| CATTTGTTCATCAACCTCCT+TGG | - | chr4_2:13372314-13372333 | None:intergenic | 40.0% | |
| AATAGGAGGAGTTCTTGTTC+TGG | - | chr4_2:13372345-13372364 | None:intergenic | 40.0% | |
| ! | CAAGAACTCCTCCTATTTTG+TGG | + | chr4_2:13372348-13372367 | Msa0590000:CDS | 40.0% |
| ! | ACTCCTCCTATTTTGTGGAA+TGG | + | chr4_2:13372353-13372372 | Msa0590000:CDS | 40.0% |
| !! | AAGCCATTTTCAACCCTGTT+GGG | - | chr4_2:13372417-13372436 | None:intergenic | 40.0% |
| GAACATTTCCTGAATGGATG+TGG | - | chr4_2:13372458-13372477 | None:intergenic | 40.0% | |
| CATTCAGGAAATGTTCCGTA+GGG | + | chr4_2:13372462-13372481 | Msa0590000:CDS | 40.0% | |
| TGAATTGTTCACTCACCCTA+CGG | - | chr4_2:13372480-13372499 | None:intergenic | 40.0% | |
| TGAGAGCAACATGAATGATC+TGG | + | chr4_2:13372576-13372595 | Msa0590000:CDS | 40.0% | |
| !!! | TCTGTTTTGATGTGACCTGT+TGG | + | chr4_2:13372791-13372810 | Msa0590000:three_prime_UTR | 40.0% |
| CAGAAGAACATGTCACAAGA+TGG | - | chr4_2:13372963-13372982 | None:intergenic | 40.0% | |
| GGCCAATGCGGTAATCAAAT+CGG | + | chr4_2:13370259-13370278 | Msa0590000:CDS | 45.0% | |
| ! | CTCCGATTTGATTACCGCAT+TGG | - | chr4_2:13370264-13370283 | None:intergenic | 45.0% |
| ! | GGTTGGATCGATTCCATGTT+CGG | - | chr4_2:13370311-13370330 | None:intergenic | 45.0% |
| GAACATGGAATCGATCCAAC+CGG | + | chr4_2:13370310-13370329 | Msa0590000:CDS | 45.0% | |
| ! | TGGAAGATTTGTTCCGAGAG+CGG | + | chr4_2:13370399-13370418 | Msa0590000:CDS | 45.0% |
| AGATCCATAAGAACCGCTCT+CGG | - | chr4_2:13370415-13370434 | None:intergenic | 45.0% | |
| CGGATACTATCCATAGTACC+CGG | - | chr4_2:13370442-13370461 | None:intergenic | 45.0% | |
| CGGGTACTATGGATAGTATC+CGG | + | chr4_2:13370440-13370459 | Msa0590000:CDS | 45.0% | |
| ACTATGGATAGTATCCGGTC+TGG | + | chr4_2:13370445-13370464 | Msa0590000:CDS | 45.0% | |
| CTGGGAATAACTGGGCAAAA+GGG | + | chr4_2:13370521-13370540 | Msa0590000:CDS | 45.0% | |
| !! | GTCTTGTGGTTGAAGTGTTG+AGG | + | chr4_2:13370937-13370956 | Msa0590000:intron | 45.0% |
| !! | AGCCCTTTGTTATTGCTTGC+AGG | + | chr4_2:13371313-13371332 | Msa0590000:intron | 45.0% |
| !! | GCCCTTTGTTATTGCTTGCA+GGG | + | chr4_2:13371314-13371333 | Msa0590000:intron | 45.0% |
| ! | CTCTGTTTTCCCTTCTCCTA+AGG | + | chr4_2:13371745-13371764 | Msa0590000:CDS | 45.0% |
| GTGTCAGAAACCTTAGGAGA+AGG | - | chr4_2:13371758-13371777 | None:intergenic | 45.0% | |
| AGCATTGTAGGGTTCAACCA+CGG | - | chr4_2:13371780-13371799 | None:intergenic | 45.0% | |
| ACAGAGAGGGTAGCATTGTA+GGG | - | chr4_2:13371791-13371810 | None:intergenic | 45.0% | |
| AACAGAGAGGGTAGCATTGT+AGG | - | chr4_2:13371792-13371811 | None:intergenic | 45.0% | |
| AACAAGCTGGTGAACAGAGA+GGG | - | chr4_2:13371804-13371823 | None:intergenic | 45.0% | |
| GCGGAAGCAAATGTCATACA+AGG | - | chr4_2:13371864-13371883 | None:intergenic | 45.0% | |
| !! | GTTTTATGTGGTGGTGCAGT+TGG | + | chr4_2:13371989-13372008 | Msa0590000:intron | 45.0% |
| CTGATATCAGCAACCATGTC+TGG | + | chr4_2:13372025-13372044 | Msa0590000:CDS | 45.0% | |
| GATCAGAGTTAAGCTGACCA+GGG | - | chr4_2:13372072-13372091 | None:intergenic | 45.0% | |
| AGATCAGAGTTAAGCTGACC+AGG | - | chr4_2:13372073-13372092 | None:intergenic | 45.0% | |
| AAAAAGTGAAGACGCGGGAA+TGG | - | chr4_2:13372121-13372140 | None:intergenic | 45.0% | |
| CCATGAAAAAGTGAAGACGC+GGG | - | chr4_2:13372126-13372145 | None:intergenic | 45.0% | |
| ACTTAGAGTCCTGTACTGCT+GGG | - | chr4_2:13372179-13372198 | None:intergenic | 45.0% | |
| ! | CACATTTGTTGAGTGAGCTC+AGG | - | chr4_2:13372205-13372224 | None:intergenic | 45.0% |
| CTGAGCTCACTCAACAAATG+TGG | + | chr4_2:13372203-13372222 | Msa0590000:CDS | 45.0% | |
| AGCAGCACACATCATGTTCT+TGG | - | chr4_2:13372233-13372252 | None:intergenic | 45.0% | |
| TAAACATGGCTGAAGCAGTG+AGG | - | chr4_2:13372276-13372295 | None:intergenic | 45.0% | |
| ACTGCTTCAGCCATGTTTAG+AGG | + | chr4_2:13372277-13372296 | Msa0590000:CDS | 45.0% | |
| GCTCATCTTGCCTCTAAACA+TGG | - | chr4_2:13372290-13372309 | None:intergenic | 45.0% | |
| !! | AGCCATTTTCAACCCTGTTG+GGG | - | chr4_2:13372416-13372435 | None:intergenic | 45.0% |
| !! | GAAGCCATTTTCAACCCTGT+TGG | - | chr4_2:13372418-13372437 | None:intergenic | 45.0% |
| TGGAAACTCCACATCCATTC+AGG | + | chr4_2:13372447-13372466 | Msa0590000:CDS | 45.0% | |
| CCTACGGAACATTTCCTGAA+TGG | - | chr4_2:13372464-13372483 | None:intergenic | 45.0% | |
| CCATTCAGGAAATGTTCCGT+AGG | + | chr4_2:13372461-13372480 | Msa0590000:CDS | 45.0% | |
| CACTGCTATGTTCAGGAGAA+AGG | + | chr4_2:13372498-13372517 | Msa0590000:CDS | 45.0% | |
| GGAGAAAGGCTTTCTTGCAT+TGG | + | chr4_2:13372512-13372531 | Msa0590000:CDS | 45.0% | |
| ! | GCTTTCTTGCATTGGTACAC+TGG | + | chr4_2:13372520-13372539 | Msa0590000:CDS | 45.0% |
| ! | TTGCATTGGTACACTGGTGA+AGG | + | chr4_2:13372526-13372545 | Msa0590000:CDS | 45.0% |
| TCCATACTCATCCTCATCAG+CGG | - | chr4_2:13372632-13372651 | None:intergenic | 45.0% | |
| TGATGAGGATGAGTATGGAG+AGG | + | chr4_2:13372633-13372652 | Msa0590000:CDS | 45.0% | |
| GATGAGTATGGAGAGGAAGA+GGG | + | chr4_2:13372640-13372659 | Msa0590000:CDS | 45.0% | |
| ! | TTGATGTGACCTGTTGGTAG+TGG | + | chr4_2:13372797-13372816 | Msa0590000:three_prime_UTR | 45.0% |
| TGTCTTTCTCCACTACCAAC+AGG | - | chr4_2:13372809-13372828 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTTTTTTTTTGTT+TGG | - | chr4_2:13370072-13370091 | None:intergenic | 5.0% |
| TGTGAGTGTGAGAGAGGGTT+TGG | - | chr4_2:13370115-13370134 | None:intergenic | 50.0% | |
| ! | GAGAGTGTGAGTGTGAGAGA+GGG | - | chr4_2:13370120-13370139 | None:intergenic | 50.0% |
| ! | TGAGAGTGTGAGTGTGAGAG+AGG | - | chr4_2:13370121-13370140 | None:intergenic | 50.0% |
| ! | CGGAGCAAAATTCTGGGAAG+TGG | + | chr4_2:13370279-13370298 | Msa0590000:CDS | 50.0% |
| TGTTCCGAGAGCGGTTCTTA+TGG | + | chr4_2:13370408-13370427 | Msa0590000:CDS | 50.0% | |
| GGATCTTGAACCGGGTACTA+TGG | + | chr4_2:13370429-13370448 | Msa0590000:CDS | 50.0% | |
| TGTTTGGTCAGAGTGGTGCT+GGG | + | chr4_2:13370503-13370522 | Msa0590000:CDS | 50.0% | |
| ! | AGAGTGGTGCTGGGAATAAC+TGG | + | chr4_2:13370512-13370531 | Msa0590000:CDS | 50.0% |
| ! | GAGTGGTGCTGGGAATAACT+GGG | + | chr4_2:13370513-13370532 | Msa0590000:CDS | 50.0% |
| GCTGGGAATAACTGGGCAAA+AGG | + | chr4_2:13370520-13370539 | Msa0590000:CDS | 50.0% | |
| CAAGTATGCCACTCACTTGG+TGG | + | chr4_2:13371644-13371663 | Msa0590000:CDS | 50.0% | |
| ! | ACTCACTTGGTGGAGGAACT+GGG | + | chr4_2:13371654-13371673 | Msa0590000:CDS | 50.0% |
| TCAGGGAAGAATACCCAGAC+AGG | + | chr4_2:13371708-13371727 | Msa0590000:CDS | 50.0% | |
| TCCTAAGGTTTCTGACACCG+TGG | + | chr4_2:13371760-13371779 | Msa0590000:CDS | 50.0% | |
| ! | ACCACGGTGTCAGAAACCTT+AGG | - | chr4_2:13371764-13371783 | None:intergenic | 50.0% |
| CAACAAGCTGGTGAACAGAG+AGG | - | chr4_2:13371805-13371824 | None:intergenic | 50.0% | |
| ACAACAGGTGACACCAGACA+TGG | - | chr4_2:13372041-13372060 | None:intergenic | 50.0% | |
| !! | CTGGTGTCACCTGTTGTTTG+AGG | + | chr4_2:13372044-13372063 | Msa0590000:CDS | 50.0% |
| ! | ACCTGTTGTTTGAGGTTCCC+TGG | + | chr4_2:13372052-13372071 | Msa0590000:CDS | 50.0% |
| ACCAGGGAACCTCAAACAAC+AGG | - | chr4_2:13372056-13372075 | None:intergenic | 50.0% | |
| !!! | CCCGCGTCTTCACTTTTTCA+TGG | + | chr4_2:13372123-13372142 | Msa0590000:CDS | 50.0% |
| CACTTAGAGTCCTGTACTGC+TGG | - | chr4_2:13372180-13372199 | None:intergenic | 50.0% | |
| TAGAGGCAAGATGAGCACCA+AGG | + | chr4_2:13372294-13372313 | Msa0590000:CDS | 50.0% | |
| TCTGTGATATCCCCCCAACA+GGG | + | chr4_2:13372401-13372420 | Msa0590000:CDS | 50.0% | |
| ! | CCATTTTCAACCCTGTTGGG+GGG | - | chr4_2:13372414-13372433 | None:intergenic | 50.0% |
| !! | GCCATTTTCAACCCTGTTGG+GGG | - | chr4_2:13372415-13372434 | None:intergenic | 50.0% |
| TTGGTACACTGGTGAAGGCA+TGG | + | chr4_2:13372531-13372550 | Msa0590000:CDS | 50.0% | |
| GGACGAGATGGAATTCACTG+AGG | + | chr4_2:13372552-13372571 | Msa0590000:CDS | 50.0% | |
| ATACTCATCCTCATCAGCGG+TGG | - | chr4_2:13372629-13372648 | None:intergenic | 50.0% | |
| ACCGCTGATGAGGATGAGTA+TGG | + | chr4_2:13372628-13372647 | Msa0590000:CDS | 50.0% | |
| GGATGAGTATGGAGAGGAAG+AGG | + | chr4_2:13372639-13372658 | Msa0590000:CDS | 50.0% | |
| CACATCCAAGGTGGCCAATG+CGG | + | chr4_2:13370247-13370266 | Msa0590000:CDS | 55.0% | |
| ! | GATTACCGCATTGGCCACCT+TGG | - | chr4_2:13370255-13370274 | None:intergenic | 55.0% |
| ! | GAAGTGGTTTGCGCCGAACA+TGG | + | chr4_2:13370295-13370314 | Msa0590000:CDS | 55.0% |
| TGAATCACCGGTGTAGCGTC+CGG | - | chr4_2:13370332-13370351 | None:intergenic | 55.0% | |
| AGTATCCGGTCTGGACCGTA+TGG | + | chr4_2:13370454-13370473 | Msa0590000:CDS | 55.0% | |
| TCTGACCATACGGTCCAGAC+CGG | - | chr4_2:13370462-13370481 | None:intergenic | 55.0% | |
| GTGTTTGGTCAGAGTGGTGC+TGG | + | chr4_2:13370502-13370521 | Msa0590000:CDS | 55.0% | |
| ! | GTATGCCACTCACTTGGTGG+AGG | + | chr4_2:13371647-13371666 | Msa0590000:CDS | 55.0% |
| CAGTTCCTCCACCAAGTGAG+TGG | - | chr4_2:13371655-13371674 | None:intergenic | 55.0% | |
| ! | CACTCACTTGGTGGAGGAAC+TGG | + | chr4_2:13371653-13371672 | Msa0590000:CDS | 55.0% |
| TGGAGGAACTGGGTCTGGAA+TGG | + | chr4_2:13371664-13371683 | Msa0590000:CDS | 55.0% | |
| ! | GGAGGAACTGGGTCTGGAAT+GGG | + | chr4_2:13371665-13371684 | Msa0590000:CDS | 55.0% |
| !! | TTTGCTCCGTTGACTTCCCG+TGG | + | chr4_2:13372151-13372170 | Msa0590000:CDS | 55.0% |
| ! | TGATGTGTGCTGCTGACCCT+AGG | + | chr4_2:13372239-13372258 | Msa0590000:CDS | 55.0% |
| !! | TGAGGTATCGCCCATGCCTA+GGG | - | chr4_2:13372258-13372277 | None:intergenic | 55.0% |
| AGGCAAGATGAGCACCAAGG+AGG | + | chr4_2:13372297-13372316 | Msa0590000:CDS | 55.0% | |
| GTCTGTGATATCCCCCCAAC+AGG | + | chr4_2:13372400-13372419 | Msa0590000:CDS | 55.0% | |
| CCCCCCAACAGGGTTGAAAA+TGG | + | chr4_2:13372411-13372430 | Msa0590000:CDS | 55.0% | |
| ! | TGGTGAAGGCATGGACGAGA+TGG | + | chr4_2:13372540-13372559 | Msa0590000:CDS | 55.0% |
| TGGAGAGGAAGAGGGTGAAG+AGG | + | chr4_2:13372648-13372667 | Msa0590000:CDS | 55.0% | |
| GATCCAACCGGACGCTACAC+CGG | + | chr4_2:13370322-13370341 | Msa0590000:CDS | 60.0% | |
| CTTGGTGGAGGAACTGGGTC+TGG | + | chr4_2:13371659-13371678 | Msa0590000:CDS | 60.0% | |
| TGGGAGCCACGGGAAGTCAA+CGG | - | chr4_2:13372160-13372179 | None:intergenic | 60.0% | |
| TCCTGTACTGCTGGGAGCCA+CGG | - | chr4_2:13372171-13372190 | None:intergenic | 60.0% | |
| ! | TGTGCTGCTGACCCTAGGCA+TGG | + | chr4_2:13372244-13372263 | Msa0590000:CDS | 60.0% |
| ! | GTGCTGCTGACCCTAGGCAT+GGG | + | chr4_2:13372245-13372264 | Msa0590000:CDS | 60.0% |
| !! | GTGAGGTATCGCCCATGCCT+AGG | - | chr4_2:13372259-13372278 | None:intergenic | 60.0% |
| CCTCATCAGCGGTGGCATCT+TGG | - | chr4_2:13372621-13372640 | None:intergenic | 60.0% | |
| CCAAGATGCCACCGCTGATG+AGG | + | chr4_2:13372618-13372637 | Msa0590000:CDS | 60.0% | |
| TCACCGGTGTAGCGTCCGGT+TGG | - | chr4_2:13370328-13370347 | None:intergenic | 65.0% | |
| CCTGTACTGCTGGGAGCCAC+GGG | - | chr4_2:13372170-13372189 | None:intergenic | 65.0% | |
| CCCGTGGCTCCCAGCAGTAC+AGG | + | chr4_2:13372167-13372186 | Msa0590000:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 13370063 | 13373027 | 13370063 | ID=Msa0590000;Name=Msa0590000 |
| chr4_2 | mRNA | 13370063 | 13373027 | 13370063 | ID=Msa0590000-mRNA-1;Parent=Msa0590000;Name=Msa0590000-mRNA-1;_AED=0.03;_eAED=0.03;_QI=169|1|1|1|1|1|3|334|449 |
| chr4_2 | exon | 13370063 | 13370625 | 13370063 | ID=Msa0590000-mRNA-1:exon:3877;Parent=Msa0590000-mRNA-1 |
| chr4_2 | exon | 13371639 | 13371908 | 13371639 | ID=Msa0590000-mRNA-1:exon:3878;Parent=Msa0590000-mRNA-1 |
| chr4_2 | exon | 13372008 | 13373027 | 13372008 | ID=Msa0590000-mRNA-1:exon:3879;Parent=Msa0590000-mRNA-1 |
| chr4_2 | five_prime_UTR | 13370063 | 13370231 | 13370063 | ID=Msa0590000-mRNA-1:five_prime_utr;Parent=Msa0590000-mRNA-1 |
| chr4_2 | CDS | 13370232 | 13370625 | 13370232 | ID=Msa0590000-mRNA-1:cds;Parent=Msa0590000-mRNA-1 |
| chr4_2 | CDS | 13371639 | 13371908 | 13371639 | ID=Msa0590000-mRNA-1:cds;Parent=Msa0590000-mRNA-1 |
| chr4_2 | CDS | 13372008 | 13372693 | 13372008 | ID=Msa0590000-mRNA-1:cds;Parent=Msa0590000-mRNA-1 |
| chr4_2 | three_prime_UTR | 13372694 | 13373027 | 13372694 | ID=Msa0590000-mRNA-1:three_prime_utr;Parent=Msa0590000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
