AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0980540


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0980540 MtrunA17_Chr6g0461001 99.007 302 3 0 1 302 1 302 0.0 612
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0980540 AT5G55000.2 81.145 297 53 1 6 302 5 298 1.85e-178 494
Msa0980540 AT5G55000.1 82.437 279 46 1 6 284 5 280 2.45e-170 474

Find 86 sgRNAs with CRISPR-Local

Find 517 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCGAGGGGTTAATCTTTC+TGG 0.140143 6_4:-18934354 Msa0980540:CDS
TTCATTAGTATTTGCTTCTA+TGG 0.191271 6_4:-18929040 Msa0980540:three_prime_UTR
AAATCTTCGTGGTGCTTTAT+TGG 0.215956 6_4:-18933202 Msa0980540:CDS
CTTCTTCCTTCCTCTTATTA+AGG 0.218270 6_4:+18934442 None:intergenic
CGGAGCAATCAGATAATATT+TGG 0.225108 6_4:-18929259 Msa0980540:exon
TCTTCAATGTGCAAAGTTTC+GGG 0.233983 6_4:-18933763 Msa0980540:intron
TTTGTTGATTTGTTTGTATT+TGG 0.266202 6_4:-18929017 Msa0980540:three_prime_UTR
ATATTCACATCACAATTAAA+AGG 0.267937 6_4:+18928898 None:intergenic
ATCTTCAATGTGCAAAGTTT+CGG 0.272003 6_4:-18933764 Msa0980540:CDS
GACGATCTTCTCTAACATTT+AGG 0.273472 6_4:-18929072 Msa0980540:three_prime_UTR
TTAGGGATTGTGTACGTTAT+TGG 0.274793 6_4:+18937634 None:intergenic
TGGGCGTTGATTGATGTTTA+TGG 0.281457 6_4:-18929110 Msa0980540:three_prime_UTR
TAGGGATTGTGTACGTTATT+GGG 0.299856 6_4:+18937635 None:intergenic
TCGCAGGAGGAAAGAAATTC+TGG 0.315051 6_4:-18937742 Msa0980540:intron
CTTCGTGGTGCTTTATTGGC+TGG 0.321965 6_4:-18933198 Msa0980540:CDS
TTCTCATGAAGTTGTGCAAC+TGG 0.323349 6_4:-18929130 Msa0980540:three_prime_UTR
GACACATTCTCAATTGGTTA+AGG 0.327644 6_4:-18935143 Msa0980540:CDS
TAGGGAAGATGTGAATTTAC+TGG 0.329065 6_4:-18933228 Msa0980540:intron
CTGAATATTCAGAGCTGTTA+AGG 0.330521 6_4:-18935092 Msa0980540:CDS
TCCTCTTATTAAGGACATCT+TGG 0.341120 6_4:+18934451 None:intergenic
TCTGATTGCTCCGAGCAAAT+TGG 0.346394 6_4:+18929269 None:intergenic
TGGGATCTTGAGAGAGAGTA+TGG 0.355414 6_4:+18937654 None:intergenic
CAATCTGGAGGGAGCTAATC+TGG 0.361067 6_4:-18931108 Msa0980540:CDS
AAATGTTAGGGGCTTATAGA+TGG 0.404279 6_4:-18934477 Msa0980540:intron
TTCCTTCCTTTGTGCGATGA+AGG 0.428408 6_4:-18937905 Msa0980540:exon
ACACATTCTCAATTGGTTAA+GGG 0.428609 6_4:-18935142 Msa0980540:CDS
TGGCATCGACCTCTCTAAAC+TGG 0.430625 6_4:-18934334 Msa0980540:intron
ACTTCAGACACATTCTCAAT+TGG 0.430939 6_4:-18935149 Msa0980540:CDS
ACGAAGCGCGGAAGATAAAT+CGG 0.452142 6_4:+18937873 None:intergenic
CAGATTAGCTCCCTCCAGAT+TGG 0.453075 6_4:+18931109 None:intergenic
TTCGTGGTGCTTTATTGGCT+GGG 0.455181 6_4:-18933197 Msa0980540:CDS
TTGGAAGGAGCAAAGCTTGA+TGG 0.460846 6_4:-18929294 Msa0980540:CDS
TTGCAAGGGCTCTACTTGTT+CGG 0.463780 6_4:+18938016 None:intergenic
GTATACAATCTGAGAGAGTC+AGG 0.465422 6_4:-18934377 Msa0980540:CDS
TGATCTTACTAATGCCAATC+TGG 0.476212 6_4:-18931123 Msa0980540:CDS
AGATAATAATATTGAGAAGT+GGG 0.480162 6_4:-18929224 Msa0980540:three_prime_UTR
TGAATATTCAGAGCTGTTAA+GGG 0.481904 6_4:-18935091 Msa0980540:CDS
AAACAGTACTATACACAAGA+TGG 0.485477 6_4:+18928952 None:intergenic
GACGCAGATAAGCTCGTTGA+AGG 0.487337 6_4:+18930154 None:intergenic
CCTGCGATCTGCACATCTAC+AGG 0.491495 6_4:-18932636 Msa0980540:intron
TCCAAGATGTCCTTAATAAG+AGG 0.492750 6_4:-18934452 Msa0980540:CDS
CAGAGTTGCATTATGAAAGA+TGG 0.497185 6_4:+18933328 None:intergenic
ATAGCAGCGAGCATTGAATC+TGG 0.498707 6_4:+18937689 None:intergenic
TTAGTAGGATGTAGCTTCTG+TGG 0.501874 6_4:-18932665 Msa0980540:CDS
TGTTAGAGAAGATCGTCAAC+AGG 0.502480 6_4:+18929078 None:intergenic
TCTGAGAGAGTCAGGTTTCG+AGG 0.507145 6_4:-18934369 Msa0980540:CDS
CGTTGATTGATGTTTATGGT+TGG 0.510408 6_4:-18929106 Msa0980540:three_prime_UTR
AGGGAAGATGTGAATTTACT+GGG 0.512755 6_4:-18933227 Msa0980540:intron
AATATTGAGAAGTGGGGATG+TGG 0.516734 6_4:-18929217 Msa0980540:three_prime_UTR
CTTGATGGTGCCAATTTGCT+CGG 0.516763 6_4:-18929279 Msa0980540:CDS
CTTCAAAGCGCAAATCTACA+AGG 0.519894 6_4:-18933168 Msa0980540:intron
CTGAGAGAGTCAGGTTTCGA+GGG 0.520649 6_4:-18934368 Msa0980540:CDS
TTTATCAATCAGGACTTGGA+AGG 0.525684 6_4:-18929309 Msa0980540:intron
TAAATCAAGTAGGCATAACT+AGG 0.528638 6_4:+18937989 None:intergenic
TTATAGGATGTTGATGCTGA+GGG 0.533321 6_4:-18933353 Msa0980540:intron
TCTGGAAGGAGCAAATTTGA+AGG 0.533384 6_4:-18931090 Msa0980540:intron
TGGCGTGGTGCCCACTCTCG+AGG 0.534975 6_4:-18935118 Msa0980540:CDS
AAGGTTAGCATTCTTCAACT+TGG 0.536677 6_4:+18930173 None:intergenic
TTTACTGGGGCAAATCTTCG+TGG 0.542197 6_4:-18933213 Msa0980540:CDS
AAGATAATAATATTGAGAAG+TGG 0.548453 6_4:-18929225 Msa0980540:three_prime_UTR
CCTGTAGATGTGCAGATCGC+AGG 0.553123 6_4:+18932636 None:intergenic
GTCCTTCATCGCACAAAGGA+AGG 0.557669 6_4:+18937903 None:intergenic
GATAATAATATTGAGAAGTG+GGG 0.569797 6_4:-18929223 Msa0980540:three_prime_UTR
TAATAAGAGGAAGGAAGAAG+AGG 0.574612 6_4:-18934439 Msa0980540:CDS
TCCGCGCTTCGTCTCAACAT+CGG 0.582992 6_4:-18937862 Msa0980540:intron
GCGCGGAAGATAAATCGGAT+TGG 0.584182 6_4:+18937878 None:intergenic
CAAGTTGAATTAAATCAAGT+AGG 0.585442 6_4:+18937979 None:intergenic
TTTATAGGATGTTGATGCTG+AGG 0.585562 6_4:-18933354 Msa0980540:intron
TCTCATGAAGTTGTGCAACT+GGG 0.587471 6_4:-18929129 Msa0980540:three_prime_UTR
AACAGTACTATACACAAGAT+GGG 0.589419 6_4:+18928953 None:intergenic
ATTCTCAATTGGTTAAGGGA+TGG 0.600914 6_4:-18935138 Msa0980540:CDS
ATATTCAGCTTCCTCGAGAG+TGG 0.601502 6_4:+18935107 None:intergenic
AGATGTCCTTAATAAGAGGA+AGG 0.603876 6_4:-18934448 Msa0980540:CDS
TTCATCGCACAAAGGAAGGA+AGG 0.606206 6_4:+18937907 None:intergenic
AAGAATTTACCAGTTTAGAG+AGG 0.607566 6_4:+18934325 None:intergenic
ACCGATGTTGAGACGAAGCG+CGG 0.616509 6_4:+18937861 None:intergenic
CTTACTAATGCCAATCTGGA+GGG 0.617585 6_4:-18931119 Msa0980540:CDS
TATTCAGCTTCCTCGAGAGT+GGG 0.618214 6_4:+18935108 None:intergenic
CTGGAGGGAGCTAATCTGGA+AGG 0.618931 6_4:-18931104 Msa0980540:CDS
ATGCTCGCTGCTATGTTCAG+TGG 0.625132 6_4:-18937680 Msa0980540:CDS
CAATTGGTTAAGGGATGGCG+TGG 0.626299 6_4:-18935133 Msa0980540:CDS
TCTTACTAATGCCAATCTGG+AGG 0.628999 6_4:-18931120 Msa0980540:CDS
CAGTACGTGTCAATTCTGTA+CGG 0.635724 6_4:+18934412 None:intergenic
TGAGAGAGTCAGGTTTCGAG+GGG 0.661863 6_4:-18934367 Msa0980540:CDS
GGAAGTCCTTCATCGCACAA+AGG 0.690764 6_4:+18937899 None:intergenic
GGGAAGATGTGAATTTACTG+GGG 0.736367 6_4:-18933226 Msa0980540:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAAAT+TGG + chr6_4:18930062-18930081 None:intergenic 0.0%
!!! TTTTTTTTAATGAATTTGTT+TGG - chr6_4:18929353-18929372 Msa0980540:intron 10.0%
!!! TAGAAAATTCAATTTTTTTT+TGG - chr6_4:18930601-18930620 Msa0980540:intron 10.0%
!!! CATACATTTTATATAATAAA+TGG + chr6_4:18932640-18932659 None:intergenic 10.0%
!! TATTATATTTGTACAAATTA+TGG - chr6_4:18935445-18935464 Msa0980540:intron 10.0%
!! GATAAATAAATTTATGTAAT+TGG - chr6_4:18936146-18936165 Msa0980540:intron 10.0%
!! ATAAAATATGATAAGCTATA+AGG - chr6_4:18929717-18929736 Msa0980540:intron 15.0%
!! TTATTATATAGGAAAACAAA+AGG + chr6_4:18930282-18930301 None:intergenic 15.0%
!!! TTTTATACTTATACATGAAA+GGG + chr6_4:18930580-18930599 None:intergenic 15.0%
!! CTTAAAAATTAAAAACTTGT+TGG - chr6_4:18930958-18930977 Msa0980540:intron 15.0%
!!! GGTAAAAATTAGTTATTTTT+AGG - chr6_4:18931434-18931453 Msa0980540:intron 15.0%
!!! TTATTTTTAGGATGATTTTA+GGG - chr6_4:18931446-18931465 Msa0980540:intron 15.0%
!!! TTTTGTTATATTTGTTGATT+TGG - chr6_4:18931703-18931722 Msa0980540:intron 15.0%
!!! TTTGTTATATTTGTTGATTT+GGG - chr6_4:18931704-18931723 Msa0980540:intron 15.0%
!! AAATGATATGTAAATAAGTT+TGG - chr6_4:18931974-18931993 Msa0980540:intron 15.0%
!!! ACTTTATTGTTTTATTAGTA+TGG - chr6_4:18932002-18932021 Msa0980540:intron 15.0%
!! ATACTTTATAGTTTCTTATA+TGG - chr6_4:18932380-18932399 Msa0980540:intron 15.0%
!! TCTTAAATATTATACAATTG+TGG - chr6_4:18932878-18932897 Msa0980540:intron 15.0%
!! TATGTTAATTTCTACAAAAA+TGG + chr6_4:18932971-18932990 None:intergenic 15.0%
!! AATATATTTATGTTAAAGAC+AGG + chr6_4:18933395-18933414 None:intergenic 15.0%
!!! TTTTCTTGATTACAATATTT+TGG - chr6_4:18933493-18933512 Msa0980540:intron 15.0%
!! TTATTTATGAATGAATACAT+TGG + chr6_4:18934821-18934840 None:intergenic 15.0%
!!! ATTTTTTCAAAAACATTTTC+TGG - chr6_4:18935118-18935137 Msa0980540:CDS 15.0%
!! TTAGTTTATAACCAATTAAA+TGG - chr6_4:18935562-18935581 Msa0980540:intron 15.0%
!! TTGTACAAAAAAAAGAAAAA+AGG - chr6_4:18935918-18935937 Msa0980540:intron 15.0%
!!! AATTTATGTAATTGGATTTT+TGG - chr6_4:18936154-18936173 Msa0980540:intron 15.0%
!!! GAAATGTTATTTTTCTATTT+TGG - chr6_4:18936687-18936706 Msa0980540:intron 15.0%
!!! ATTTTCAAAATAGAAAAATC+AGG + chr6_4:18936935-18936954 None:intergenic 15.0%
!! AAAATCATATTAATAGGAAT+TGG + chr6_4:18936959-18936978 None:intergenic 15.0%
!! CATTAGAAAATCATATTAAT+AGG + chr6_4:18936965-18936984 None:intergenic 15.0%
!!! ATTAATATGATTTTCTAATG+TGG - chr6_4:18936965-18936984 Msa0980540:intron 15.0%
!! TATTTAACTATTCATTCTAA+AGG + chr6_4:18937210-18937229 None:intergenic 15.0%
!! AAATAAAATGAAGAAGCTTA+GGG + chr6_4:18929322-18929341 None:intergenic 20.0%
!! TAAATAAAATGAAGAAGCTT+AGG + chr6_4:18929323-18929342 None:intergenic 20.0%
!! TTAAGTGTAATTATATGTGT+CGG - chr6_4:18929496-18929515 Msa0980540:intron 20.0%
!! AAATATGAAATGACGTAAAA+AGG - chr6_4:18929637-18929656 Msa0980540:intron 20.0%
!! GATTAGTAAAAATAAGCTAT+AGG - chr6_4:18929784-18929803 Msa0980540:intron 20.0%
!! ATGACTAAAAAATACTTGTT+TGG + chr6_4:18929831-18929850 None:intergenic 20.0%
!! ATTTGAGCTTATAAGATATA+GGG - chr6_4:18929849-18929868 Msa0980540:intron 20.0%
!! GCTTATAAACATAAGTTATA+AGG + chr6_4:18929900-18929919 None:intergenic 20.0%
!!! TTTTTTCAATAAAGATTGCA+GGG + chr6_4:18930028-18930047 None:intergenic 20.0%
!!! ATTTTTTCAATAAAGATTGC+AGG + chr6_4:18930029-18930048 None:intergenic 20.0%
!!! CTACAACTGATTTATTATAT+AGG + chr6_4:18930293-18930312 None:intergenic 20.0%
!!! CTTTTATACTTATACATGAA+AGG + chr6_4:18930581-18930600 None:intergenic 20.0%
!!! TTTTGAAAAGTATTTCAAAC+AGG + chr6_4:18930916-18930935 None:intergenic 20.0%
!!! ATAAGTTTTGAAAAGAGTTT+TGG - chr6_4:18930999-18931018 Msa0980540:intron 20.0%
!!! TTCTCTTATAGTTTTTCTAA+GGG + chr6_4:18931132-18931151 None:intergenic 20.0%
!!! TTTCTCTTATAGTTTTTCTA+AGG + chr6_4:18931133-18931152 None:intergenic 20.0%
!! CACAAATTGTTTCATAATTT+GGG + chr6_4:18931281-18931300 None:intergenic 20.0%
!! TCACAAATTGTTTCATAATT+TGG + chr6_4:18931282-18931301 None:intergenic 20.0%
!! ATACGAAAACACATTTAATA+TGG - chr6_4:18931367-18931386 Msa0980540:intron 20.0%
!! TACGAAAACACATTTAATAT+GGG - chr6_4:18931368-18931387 Msa0980540:intron 20.0%
!!! GTTATTTTTAGGATGATTTT+AGG - chr6_4:18931445-18931464 Msa0980540:intron 20.0%
!!! TTGTTATATTTGTTGATTTG+GGG - chr6_4:18931705-18931724 Msa0980540:intron 20.0%
!! AGATAACAAATACATTTGAT+AGG - chr6_4:18932154-18932173 Msa0980540:intron 20.0%
!! AAATATATTGTGTAAACGAT+TGG - chr6_4:18933406-18933425 Msa0980540:intron 20.0%
!! ATTGTAATCAAGAAAATATG+TGG + chr6_4:18933489-18933508 None:intergenic 20.0%
!!! TATAAAATCAGATAGGTTTT+AGG + chr6_4:18933568-18933587 None:intergenic 20.0%
!!! TAAAACCTATCTGATTTTAT+AGG - chr6_4:18933567-18933586 Msa0980540:intron 20.0%
!! TTAATTATTTCATCTTTCCT+AGG - chr6_4:18933689-18933708 Msa0980540:intron 20.0%
!! TAATTATTTCATCTTTCCTA+GGG - chr6_4:18933690-18933709 Msa0980540:intron 20.0%
!!! TTTTTACCAATTCTGATTTT+TGG - chr6_4:18933810-18933829 Msa0980540:CDS 20.0%
!!! CAATTTTTTAGTAAACGATA+AGG - chr6_4:18933957-18933976 Msa0980540:intron 20.0%
!! CCAAATTAAAAATATTATGC+CGG + chr6_4:18934113-18934132 None:intergenic 20.0%
!! AAACAAATGAACTACATTTA+CGG + chr6_4:18934225-18934244 None:intergenic 20.0%
!! TATATTTATAACGTTGAGTA+GGG + chr6_4:18935053-18935072 None:intergenic 20.0%
!! TTATATTTATAACGTTGAGT+AGG + chr6_4:18935054-18935073 None:intergenic 20.0%
!! TAAGAAGGAAAAAATTAATG+TGG + chr6_4:18935172-18935191 None:intergenic 20.0%
!! TATAAATAATATCTTTCCAG+AGG - chr6_4:18935667-18935686 Msa0980540:intron 20.0%
!!! ATGATTTTTATTTCAAGTGA+TGG - chr6_4:18935690-18935709 Msa0980540:intron 20.0%
!!! TGATTTTTATTTCAAGTGAT+GGG - chr6_4:18935691-18935710 Msa0980540:intron 20.0%
!! TAAATACTCTTAACAATACA+TGG + chr6_4:18935990-18936009 None:intergenic 20.0%
!!! ATTTATCCAATATTTTGCAT+AGG + chr6_4:18936133-18936152 None:intergenic 20.0%
!! AAGATAATAATATTGAGAAG+TGG - chr6_4:18937711-18937730 Msa0980540:CDS 20.0%
!! AGATAATAATATTGAGAAGT+GGG - chr6_4:18937712-18937731 Msa0980540:CDS 20.0%
!!! TTTGTTGATTTGTTTGTATT+TGG - chr6_4:18937919-18937938 Msa0980540:five_prime_UTR 20.0%
!! ATATTCACATCACAATTAAA+AGG + chr6_4:18938041-18938060 None:intergenic 20.0%
!! CAAGTTGAATTAAATCAAGT+AGG + chr6_4:18928960-18928979 None:intergenic 25.0%
!!! ATTTTATTTCTGAATTTCGC+AGG - chr6_4:18929178-18929197 Msa0980540:three_prime_UTR 25.0%
! CTTCATAGATTTGTAGTATT+TGG - chr6_4:18929587-18929606 Msa0980540:intron 25.0%
! TAGTATTTGGTAAGAATTAG+CGG - chr6_4:18929600-18929619 Msa0980540:intron 25.0%
!! TTTACCTTTGCTATCTTAAT+TGG + chr6_4:18929691-18929710 None:intergenic 25.0%
! CATTTGAGCTTATAAGATAT+AGG - chr6_4:18929848-18929867 Msa0980540:intron 25.0%
! TATAAGATATAGGGTATGTT+TGG - chr6_4:18929858-18929877 Msa0980540:intron 25.0%
!!! TTTTTCAATAAAGATTGCAG+GGG + chr6_4:18930027-18930046 None:intergenic 25.0%
! ATTTGTTTGTTCAACATGTT+TGG + chr6_4:18930127-18930146 None:intergenic 25.0%
! TTGATCAAGTTCTTTATCAA+TGG + chr6_4:18930155-18930174 None:intergenic 25.0%
! TGATAAAGAACTTGATCAAA+CGG - chr6_4:18930156-18930175 Msa0980540:CDS 25.0%
! TTATATAGGAAAACAAAAGG+CGG + chr6_4:18930279-18930298 None:intergenic 25.0%
! TCAAAAGAGAGAAAATTGAA+AGG + chr6_4:18930362-18930381 None:intergenic 25.0%
! ATAAGATAGATTATAGCTGA+CGG + chr6_4:18930492-18930511 None:intergenic 25.0%
! TCAGCTATAATCTATCTTAT+CGG - chr6_4:18930492-18930511 Msa0980540:intron 25.0%
! TAAAATTTGCCCTTCATTAA+GGG + chr6_4:18930526-18930545 None:intergenic 25.0%
! ATAAAATTTGCCCTTCATTA+AGG + chr6_4:18930527-18930546 None:intergenic 25.0%
!!! AGTTTTGGTTTTTTAAGTGT+TGG - chr6_4:18931014-18931033 Msa0980540:intron 25.0%
!!! GTTTTGGTTTTTTAAGTGTT+GGG - chr6_4:18931015-18931034 Msa0980540:intron 25.0%
!!! TTTTGGTTTTTTAAGTGTTG+GGG - chr6_4:18931016-18931035 Msa0980540:intron 25.0%
!!! AAACAAAAAGTGTTTCAAAC+AGG - chr6_4:18931106-18931125 Msa0980540:CDS 25.0%
! ATATGGTTATGAAAGACTTT+GGG - chr6_4:18931192-18931211 Msa0980540:intron 25.0%
!! CTATTTTGTATTGGATAAGA+AGG + chr6_4:18931319-18931338 None:intergenic 25.0%
! ACGAAAACACATTTAATATG+GGG - chr6_4:18931369-18931388 Msa0980540:intron 25.0%
! GAACTAATATTCTCAAATGT+AGG + chr6_4:18931503-18931522 None:intergenic 25.0%
!! CATTTGAGAATATTAGTTCT+CGG - chr6_4:18931504-18931523 Msa0980540:intron 25.0%
! TAATAAGTAAATATCCCAAC+TGG + chr6_4:18931572-18931591 None:intergenic 25.0%
! ATAATAATTACATCACCTTG+AGG + chr6_4:18931641-18931660 None:intergenic 25.0%
! ATATGTAAATAAGTTTGGCA+AGG - chr6_4:18931979-18931998 Msa0980540:intron 25.0%
! TTGGAAAAAAGAAGAAACTT+CGG + chr6_4:18932113-18932132 None:intergenic 25.0%
! TCCAAATTCATGTTTAATTG+TGG - chr6_4:18932128-18932147 Msa0980540:intron 25.0%
! CCAAATTCATGTTTAATTGT+GGG - chr6_4:18932129-18932148 Msa0980540:intron 25.0%
!!! AAGTTTTTTCCTACTAGTTT+AGG - chr6_4:18932259-18932278 Msa0980540:intron 25.0%
! AACTATAAAGTATAACATCG+TGG + chr6_4:18932373-18932392 None:intergenic 25.0%
!! TATTACTTGGATATGAGTTT+TGG - chr6_4:18932689-18932708 Msa0980540:intron 25.0%
! TAGATAAAGTAAAGTTTGGA+GGG + chr6_4:18932755-18932774 None:intergenic 25.0%
! ACACTAGATAAAGTAAAGTT+TGG + chr6_4:18932759-18932778 None:intergenic 25.0%
! AATTTCTACAAAAATGGTTG+AGG + chr6_4:18932965-18932984 None:intergenic 25.0%
!!! TGTTCAATAGAGTTTTGAAA+TGG - chr6_4:18933017-18933036 Msa0980540:intron 25.0%
! TTGAAATGGTAAATTTATGC+AGG - chr6_4:18933031-18933050 Msa0980540:intron 25.0%
! TGAAATGGTAAATTTATGCA+GGG - chr6_4:18933032-18933051 Msa0980540:intron 25.0%
! TAAATTTATGCAGGGTAATA+CGG - chr6_4:18933040-18933059 Msa0980540:intron 25.0%
! AATTCAAGAGATCAATGTAA+GGG + chr6_4:18933079-18933098 None:intergenic 25.0%
! AAATTCAAGAGATCAATGTA+AGG + chr6_4:18933080-18933099 None:intergenic 25.0%
!! TACATTGATCTCTTGAATTT+TGG - chr6_4:18933080-18933099 Msa0980540:intron 25.0%
!!! TTTTCAGGATTTATCATTTG+TGG - chr6_4:18933104-18933123 Msa0980540:intron 25.0%
! ATTATATATACACGCTTGAA+TGG + chr6_4:18933250-18933269 None:intergenic 25.0%
! AAGCGTGTATATATAATATG+AGG - chr6_4:18933253-18933272 Msa0980540:intron 25.0%
! TATATAATATGAGGCAAGTT+AGG - chr6_4:18933262-18933281 Msa0980540:intron 25.0%
! TGAAAGTCTAAATTCACAAA+TGG + chr6_4:18933322-18933341 None:intergenic 25.0%
! AACATCCTATAAAATCAGAT+AGG + chr6_4:18933575-18933594 None:intergenic 25.0%
! GGAAAGATGAAATAATTAAG+AGG + chr6_4:18933688-18933707 None:intergenic 25.0%
! TAGATTCCAAAAATCAGAAT+TGG + chr6_4:18933819-18933838 None:intergenic 25.0%
! ATAAATGACAAGGAAATATG+TGG + chr6_4:18933855-18933874 None:intergenic 25.0%
!!! ATAAGGTTTGGTTGTTATTT+TGG + chr6_4:18933894-18933913 None:intergenic 25.0%
!!! CCGGCATAATATTTTTAATT+TGG - chr6_4:18934110-18934129 Msa0980540:intron 25.0%
!! CAATATCCTAGTAATTTTCT+TGG - chr6_4:18934137-18934156 Msa0980540:intron 25.0%
! AACAAATGAACTACATTTAC+GGG + chr6_4:18934224-18934243 None:intergenic 25.0%
! AATCATTAAAGATTCGTGTT+TGG + chr6_4:18934330-18934349 None:intergenic 25.0%
!!! CTATTTGAAAAAGGGTTTTT+TGG + chr6_4:18934568-18934587 None:intergenic 25.0%
!!! CAAAAAACCCTTTTTCAAAT+AGG - chr6_4:18934566-18934585 Msa0980540:intron 25.0%
! GACTAAACCTATTTGAAAAA+GGG + chr6_4:18934576-18934595 None:intergenic 25.0%
! TGACTAAACCTATTTGAAAA+AGG + chr6_4:18934577-18934596 None:intergenic 25.0%
!!! ATTTTGCCTTTAGTTTTTCT+TGG - chr6_4:18934676-18934695 Msa0980540:intron 25.0%
!!! TTTTGCCTTTAGTTTTTCTT+GGG - chr6_4:18934677-18934696 Msa0980540:intron 25.0%
! CTAAACATACAAGACAAAAT+AGG + chr6_4:18934845-18934864 None:intergenic 25.0%
! AAAGAACTATACAAGATTGA+TGG + chr6_4:18935225-18935244 None:intergenic 25.0%
! ATCAATCTTGTATAGTTCTT+TGG - chr6_4:18935224-18935243 Msa0980540:intron 25.0%
! ACGTAAATAATTAGGTTTCT+TGG - chr6_4:18935273-18935292 Msa0980540:intron 25.0%
! CGTAAATAATTAGGTTTCTT+GGG - chr6_4:18935274-18935293 Msa0980540:intron 25.0%
! GTAAATAATTAGGTTTCTTG+GGG - chr6_4:18935275-18935294 Msa0980540:intron 25.0%
! TAAATAATTAGGTTTCTTGG+GGG - chr6_4:18935276-18935295 Msa0980540:intron 25.0%
!! ATGAATTTTTGTCCTAATGA+AGG - chr6_4:18935351-18935370 Msa0980540:intron 25.0%
!! AATCACTTCATTTTATGACA+AGG - chr6_4:18935420-18935439 Msa0980540:intron 25.0%
!! ATCACTTCATTTTATGACAA+GGG - chr6_4:18935421-18935440 Msa0980540:intron 25.0%
! GTTTATAACCAATTAAATGG+TGG - chr6_4:18935565-18935584 Msa0980540:intron 25.0%
! ACAAAGATTTCACCAAATTA+AGG + chr6_4:18935599-18935618 None:intergenic 25.0%
! TTGAAATAAAAATCATCCTC+TGG + chr6_4:18935686-18935705 None:intergenic 25.0%
!!! TAATGTTGTGTGTTGATTAA+AGG - chr6_4:18935745-18935764 Msa0980540:intron 25.0%
! AAGATATTGAGAACCTATAT+TGG - chr6_4:18935870-18935889 Msa0980540:intron 25.0%
! GTGATAAATGATAATCTTCT+AGG + chr6_4:18935968-18935987 None:intergenic 25.0%
! CTTAAGTAAATTATCAACCT+TGG - chr6_4:18936270-18936289 Msa0980540:intron 25.0%
!!! CACAATTTTTTGTCATAGAA+CGG - chr6_4:18936328-18936347 Msa0980540:intron 25.0%
! ACACGAATTTCAAACAAAAA+GGG + chr6_4:18936468-18936487 None:intergenic 25.0%
! TACACGAATTTCAAACAAAA+AGG + chr6_4:18936469-18936488 None:intergenic 25.0%
!! TTAATGTTTCACTTTAAGAG+TGG + chr6_4:18936492-18936511 None:intergenic 25.0%
! ACTCTTAAAGTGAAACATTA+AGG - chr6_4:18936491-18936510 Msa0980540:intron 25.0%
! CTTCAATGAAATCATTTCAA+TGG - chr6_4:18936658-18936677 Msa0980540:intron 25.0%
! AATCACCTGTATTTAAATTC+AGG - chr6_4:18937452-18937471 Msa0980540:intron 25.0%
! ATCACCTGTATTTAAATTCA+GGG - chr6_4:18937453-18937472 Msa0980540:intron 25.0%
! AAAACCCTGAATTTAAATAC+AGG + chr6_4:18937460-18937479 None:intergenic 25.0%
!! GTATTTAAATTCAGGGTTTT+TGG - chr6_4:18937460-18937479 Msa0980540:intron 25.0%
! GATAATAATATTGAGAAGTG+GGG - chr6_4:18937713-18937732 Msa0980540:CDS 25.0%
! TTCATTAGTATTTGCTTCTA+TGG - chr6_4:18937896-18937915 Msa0980540:exon 25.0%
CATAACTAGGAATATTGCAA+GGG + chr6_4:18928937-18928956 None:intergenic 30.0%
TAAATCAAGTAGGCATAACT+AGG + chr6_4:18928950-18928969 None:intergenic 30.0%
TCTTCCAATTAAGATAGCAA+AGG - chr6_4:18929684-18929703 Msa0980540:intron 30.0%
TTGACTAAAAAAGACTCGTT+TGG - chr6_4:18929924-18929943 Msa0980540:intron 30.0%
TATCAAAAAACGCTATAAGC+TGG + chr6_4:18929988-18930007 None:intergenic 30.0%
ACTATATTGATAGAGAGGAT+AGG - chr6_4:18930179-18930198 Msa0980540:CDS 30.0%
TATATAGGAAAACAAAAGGC+GGG + chr6_4:18930278-18930297 None:intergenic 30.0%
!! GAATTTGTAGTGTTTTGTTG+AGG + chr6_4:18930399-18930418 None:intergenic 30.0%
CAGCTATAATCTATCTTATC+GGG - chr6_4:18930493-18930512 Msa0980540:intron 30.0%
GGTAAATAACCCTTAATGAA+GGG - chr6_4:18930514-18930533 Msa0980540:intron 30.0%
! AAAGGGAAACTAACTTTTTG+GGG + chr6_4:18930563-18930582 None:intergenic 30.0%
! GAAAGGGAAACTAACTTTTT+GGG + chr6_4:18930564-18930583 None:intergenic 30.0%
! TGAAAGGGAAACTAACTTTT+TGG + chr6_4:18930565-18930584 None:intergenic 30.0%
! CCACTTACAGTTGTAATTTT+GGG + chr6_4:18930633-18930652 None:intergenic 30.0%
! ACCACTTACAGTTGTAATTT+TGG + chr6_4:18930634-18930653 None:intergenic 30.0%
TAAGTGGTAAATAACCAATG+TGG - chr6_4:18930646-18930665 Msa0980540:intron 30.0%
AAGTGGTAAATAACCAATGT+GGG - chr6_4:18930647-18930666 Msa0980540:intron 30.0%
TAGAAAAGATTGTGGAAACT+TGG - chr6_4:18930784-18930803 Msa0980540:intron 30.0%
TAAGAAGAGTAGATCAGATA+GGG - chr6_4:18930853-18930872 Msa0980540:intron 30.0%
! GAAACAGGTAAATTGTGTTT+TGG - chr6_4:18931050-18931069 Msa0980540:intron 30.0%
! TAATCTAGAGTTTAATGTGC+TGG - chr6_4:18931163-18931182 Msa0980540:intron 30.0%
GATATGGTTATGAAAGACTT+TGG - chr6_4:18931191-18931210 Msa0980540:intron 30.0%
TTAATGTCTAACTCATCTGA+AGG - chr6_4:18931224-18931243 Msa0980540:intron 30.0%
TAATGTCTAACTCATCTGAA+GGG - chr6_4:18931225-18931244 Msa0980540:intron 30.0%
!! ACACATGGACTATTTTGTAT+TGG + chr6_4:18931328-18931347 None:intergenic 30.0%
TTCTTAAAAATCTCACACGT+GGG - chr6_4:18931413-18931432 Msa0980540:intron 30.0%
!! TATGTTTTTGTTGATAGGGA+TGG - chr6_4:18931759-18931778 Msa0980540:intron 30.0%
ACACATTCTCAATTGGTTAA+GGG - chr6_4:18931794-18931813 Msa0980540:intron 30.0%
TGAATATTCAGAGCTGTTAA+GGG - chr6_4:18931845-18931864 Msa0980540:intron 30.0%
! TTTAATGTAGCTTGTGCTTT+AGG - chr6_4:18932026-18932045 Msa0980540:intron 30.0%
TGGAAAAAAGAAGAAACTTC+GGG + chr6_4:18932112-18932131 None:intergenic 30.0%
CCCACAATTAAACATGAATT+TGG + chr6_4:18932132-18932151 None:intergenic 30.0%
!!! ACATTTGATAGGTTTTGAAC+TGG - chr6_4:18932165-18932184 Msa0980540:intron 30.0%
TAGGTTATAGGAATTCAATG+CGG + chr6_4:18932427-18932446 None:intergenic 30.0%
! AACATTTTGCAAGTGATCAT+AGG + chr6_4:18932446-18932465 None:intergenic 30.0%
ATGATCACTTGCAAAATGTT+AGG - chr6_4:18932446-18932465 Msa0980540:intron 30.0%
TGATCACTTGCAAAATGTTA+GGG - chr6_4:18932447-18932466 Msa0980540:intron 30.0%
AAGAATTTACCAGTTTAGAG+AGG + chr6_4:18932614-18932633 None:intergenic 30.0%
TCTCTAAACTGGTAAATTCT+TGG - chr6_4:18932613-18932632 Msa0980540:intron 30.0%
TCTGTGTACTTGTAAAACAA+AGG - chr6_4:18932662-18932681 Msa0980540:CDS 30.0%
AAACAAAGGTCGTTATTACT+TGG - chr6_4:18932676-18932695 Msa0980540:CDS 30.0%
AGATAAAGTAAAGTTTGGAG+GGG + chr6_4:18932754-18932773 None:intergenic 30.0%
CTAGATAAAGTAAAGTTTGG+AGG + chr6_4:18932756-18932775 None:intergenic 30.0%
!! ACTTCAGTTTTGTCAATACT+TGG - chr6_4:18932785-18932804 Msa0980540:intron 30.0%
AACACATTAATGTCATCCTT+TGG + chr6_4:18932919-18932938 None:intergenic 30.0%
TGACATTAATGTGTTACCTT+AGG - chr6_4:18932924-18932943 Msa0980540:intron 30.0%
! CTCTTGAATTTTGGATTTTC+AGG - chr6_4:18933089-18933108 Msa0980540:intron 30.0%
ATCTTCAATGTGCAAAGTTT+CGG - chr6_4:18933172-18933191 Msa0980540:CDS 30.0%
TATAACCAGTCTTCATACTT+AGG - chr6_4:18933206-18933225 Msa0980540:CDS 30.0%
ATAACCAGTCTTCATACTTA+GGG - chr6_4:18933207-18933226 Msa0980540:CDS 30.0%
TGTTGACAAATGTAGATGAT+TGG - chr6_4:18933439-18933458 Msa0980540:intron 30.0%
GCTAAATAGCATAAATGACA+AGG + chr6_4:18933865-18933884 None:intergenic 30.0%
! TGCTATTTACGTGAACAAAT+AGG - chr6_4:18934033-18934052 Msa0980540:intron 30.0%
GTCAAACCAAGAAAATTACT+AGG + chr6_4:18934146-18934165 None:intergenic 30.0%
! TTTTCAGATGCTTGTTTAGT+AGG - chr6_4:18934256-18934275 Msa0980540:intron 30.0%
TCGCACATAAGAGAAAAAAA+TGG + chr6_4:18934404-18934423 None:intergenic 30.0%
!!! ATTTTTTTCTCTTATGTGCG+AGG - chr6_4:18934403-18934422 Msa0980540:CDS 30.0%
! CTTTTAATCTTAAGAGGAGT+TGG + chr6_4:18934542-18934561 None:intergenic 30.0%
! TGGATGCTTTTAATCTTAAG+AGG + chr6_4:18934548-18934567 None:intergenic 30.0%
AACCTATAGAAGTCTCAATA+AGG + chr6_4:18934728-18934747 None:intergenic 30.0%
! TTGAGACTTCTATAGGTTTT+TGG - chr6_4:18934730-18934749 Msa0980540:intron 30.0%
TGGTAGAATATTGCCTTATA+TGG + chr6_4:18934768-18934787 None:intergenic 30.0%
GAATACATTGGTAAGACAAA+TGG + chr6_4:18934809-18934828 None:intergenic 30.0%
ATCTCAAAAGGTTAAGAGAT+AGG + chr6_4:18934945-18934964 None:intergenic 30.0%
!! ATTAATTGTAGAGAAGTGTC+GGG + chr6_4:18934983-18935002 None:intergenic 30.0%
! CATTAATTGTAGAGAAGTGT+CGG + chr6_4:18934984-18935003 None:intergenic 30.0%
CAACGTTATAAATATAACCC+TGG - chr6_4:18935057-18935076 Msa0980540:intron 30.0%
CCTAATTATTTACGTGTTAG+TGG + chr6_4:18935268-18935287 None:intergenic 30.0%
CCACTAACACGTAAATAATT+AGG - chr6_4:18935265-18935284 Msa0980540:intron 30.0%
! AATTTTTGTCCTAATGAAGG+TGG - chr6_4:18935354-18935373 Msa0980540:intron 30.0%
AAGATTTCACCAAATTAAGG+TGG + chr6_4:18935596-18935615 None:intergenic 30.0%
CACACAACATTATTACACTA+GGG + chr6_4:18935737-18935756 None:intergenic 30.0%
ACACACAACATTATTACACT+AGG + chr6_4:18935738-18935757 None:intergenic 30.0%
! GTTTGAGATGATTAATTACC+TGG - chr6_4:18935767-18935786 Msa0980540:intron 30.0%
TAGAGAGCAAATACATCATA+AGG + chr6_4:18936092-18936111 None:intergenic 30.0%
TCTCTACCTATGCAAAATAT+TGG - chr6_4:18936124-18936143 Msa0980540:intron 30.0%
ATGTTCAGCAATAATGCATA+TGG + chr6_4:18936232-18936251 None:intergenic 30.0%
AGACTCTTATCATTATGACT+GGG + chr6_4:18936380-18936399 None:intergenic 30.0%
AAGACTCTTATCATTATGAC+TGG + chr6_4:18936381-18936400 None:intergenic 30.0%
! ACGATATTGTTGTTATGTTG+AGG - chr6_4:18936514-18936533 Msa0980540:intron 30.0%
ATTATGTTTAGCGAAATTGC+AGG + chr6_4:18936598-18936617 None:intergenic 30.0%
AAATCAATTCCCTATATCTC+AGG - chr6_4:18936722-18936741 Msa0980540:intron 30.0%
AATCAATTCCCTATATCTCA+GGG - chr6_4:18936723-18936742 Msa0980540:intron 30.0%
CCAATTATTGGCAGAAAAAA+AGG + chr6_4:18937005-18937024 None:intergenic 30.0%
!!! CCTTTTTTTCTGCCAATAAT+TGG - chr6_4:18937002-18937021 Msa0980540:intron 30.0%
!!! TTTTTTCTGCCAATAATTGG+CGG - chr6_4:18937005-18937024 Msa0980540:intron 30.0%
AATACAGTGTAGTCAAATAG+CGG - chr6_4:18937226-18937245 Msa0980540:intron 30.0%
CTACCTTATAGAATCACATT+GGG - chr6_4:18937428-18937447 Msa0980540:intron 30.0%
TTTCCCAATGTGATTCTATA+AGG + chr6_4:18937434-18937453 None:intergenic 30.0%
CCTGATTGATAAAAAAGGAA+CGG + chr6_4:18937620-18937639 None:intergenic 30.0%
CAAGTCCTGATTGATAAAAA+AGG + chr6_4:18937625-18937644 None:intergenic 30.0%
!!! CTTTTTTATCAATCAGGACT+TGG - chr6_4:18937623-18937642 Msa0980540:intron 30.0%
AACAGTACTATACACAAGAT+GGG + chr6_4:18937986-18938005 None:intergenic 30.0%
AAACAGTACTATACACAAGA+TGG + chr6_4:18937987-18938006 None:intergenic 30.0%
GCATAACTAGGAATATTGCA+AGG + chr6_4:18928938-18928957 None:intergenic 35.0%
!! TTATTTCTGAATTTCGCAGG+AGG - chr6_4:18929181-18929200 Msa0980540:three_prime_UTR 35.0%
TAGGGATTGTGTACGTTATT+GGG + chr6_4:18929304-18929323 None:intergenic 35.0%
TTAGGGATTGTGTACGTTAT+TGG + chr6_4:18929305-18929324 None:intergenic 35.0%
GAATTTCTTGCAATGAAGTC+CGG - chr6_4:18929413-18929432 Msa0980540:intron 35.0%
TCTCAAATTATTAGCCGTGT+CGG + chr6_4:18929465-18929484 None:intergenic 35.0%
!! AACGGACTATATTGATAGAG+AGG - chr6_4:18930174-18930193 Msa0980540:CDS 35.0%
TTAGCTGTGAAGTTAGAAAG+TGG - chr6_4:18930229-18930248 Msa0980540:intron 35.0%
TAGCTGTGAAGTTAGAAAGT+GGG - chr6_4:18930230-18930249 Msa0980540:intron 35.0%
GGGTAAATAACCCTTAATGA+AGG - chr6_4:18930513-18930532 Msa0980540:intron 35.0%
CCCAAAATTACAACTGTAAG+TGG - chr6_4:18930630-18930649 Msa0980540:intron 35.0%
CTCTTATCTTATTCCCACAT+TGG + chr6_4:18930663-18930682 None:intergenic 35.0%
ATGTGGGAATAAGATAAGAG+TGG - chr6_4:18930663-18930682 Msa0980540:intron 35.0%
AACAATTGAGAGTGAGTGTT+GGG - chr6_4:18930748-18930767 Msa0980540:intron 35.0%
ACCTATCGTAGAAAAGATTG+TGG - chr6_4:18930776-18930795 Msa0980540:intron 35.0%
! TCCACAATCTTTTCTACGAT+AGG + chr6_4:18930780-18930799 None:intergenic 35.0%
AGATTGTGGAAACTTGGATT+AGG - chr6_4:18930790-18930809 Msa0980540:intron 35.0%
! AAACTTGGATTAGGTGGTTT+AGG - chr6_4:18930799-18930818 Msa0980540:intron 35.0%
GTAAGAAGAGTAGATCAGAT+AGG - chr6_4:18930852-18930871 Msa0980540:intron 35.0%
AAGAAGAGTAGATCAGATAG+GGG - chr6_4:18930854-18930873 Msa0980540:intron 35.0%
GTTCTTAAAAATCTCACACG+TGG - chr6_4:18931412-18931431 Msa0980540:intron 35.0%
!! AGGGGTATGTTTTTGTTGAT+AGG - chr6_4:18931754-18931773 Msa0980540:intron 35.0%
!! GGGGTATGTTTTTGTTGATA+GGG - chr6_4:18931755-18931774 Msa0980540:intron 35.0%
ACTTCAGACACATTCTCAAT+TGG - chr6_4:18931787-18931806 Msa0980540:intron 35.0%
GACACATTCTCAATTGGTTA+AGG - chr6_4:18931793-18931812 Msa0980540:intron 35.0%
ATTCTCAATTGGTTAAGGGA+TGG - chr6_4:18931798-18931817 Msa0980540:intron 35.0%
CTGAATATTCAGAGCTGTTA+AGG - chr6_4:18931844-18931863 Msa0980540:intron 35.0%
GGAAAAGAAACTGAAACTTC+TGG - chr6_4:18932401-18932420 Msa0980540:intron 35.0%
TGCAAGTGATCATAGGTTAT+AGG + chr6_4:18932439-18932458 None:intergenic 35.0%
GATCACTTGCAAAATGTTAG+GGG - chr6_4:18932448-18932467 Msa0980540:intron 35.0%
AAATGTTAGGGGCTTATAGA+TGG - chr6_4:18932459-18932478 Msa0980540:intron 35.0%
TCCAAGATGTCCTTAATAAG+AGG - chr6_4:18932484-18932503 Msa0980540:intron 35.0%
TCCTCTTATTAAGGACATCT+TGG + chr6_4:18932488-18932507 None:intergenic 35.0%
AGATGTCCTTAATAAGAGGA+AGG - chr6_4:18932488-18932507 Msa0980540:intron 35.0%
CTTCTTCCTTCCTCTTATTA+AGG + chr6_4:18932497-18932516 None:intergenic 35.0%
TAATAAGAGGAAGGAAGAAG+AGG - chr6_4:18932497-18932516 Msa0980540:intron 35.0%
TGGAGGGGCTATATATATAA+TGG + chr6_4:18932739-18932758 None:intergenic 35.0%
GTCAATACTTGGAAGATGAA+AGG - chr6_4:18932796-18932815 Msa0980540:intron 35.0%
CATTAATGTGTTACCTTAGG+TGG - chr6_4:18932927-18932946 Msa0980540:intron 35.0%
GAAATAAGTTTCTCCACCTA+AGG + chr6_4:18932943-18932962 None:intergenic 35.0%
ATCAATGTAAGGGTTGAAGT+TGG + chr6_4:18933069-18933088 None:intergenic 35.0%
TCTTCAATGTGCAAAGTTTC+GGG - chr6_4:18933173-18933192 Msa0980540:CDS 35.0%
TGTTAAAGACAGGTATCCTT+TGG + chr6_4:18933385-18933404 None:intergenic 35.0%
CAGAGTTGCATTATGAAAGA+TGG + chr6_4:18933611-18933630 None:intergenic 35.0%
AGTAAATTCACATCTTCCCT+AGG + chr6_4:18933709-18933728 None:intergenic 35.0%
TAGGGAAGATGTGAATTTAC+TGG - chr6_4:18933708-18933727 Msa0980540:intron 35.0%
AGGGAAGATGTGAATTTACT+GGG - chr6_4:18933709-18933728 Msa0980540:intron 35.0%
AAATCTTCGTGGTGCTTTAT+TGG - chr6_4:18933734-18933753 Msa0980540:intron 35.0%
AATGACAAGGAAATATGTGG+AGG + chr6_4:18933852-18933871 None:intergenic 35.0%
AACCAAACCTTATCTCACTA+TGG - chr6_4:18933901-18933920 Msa0980540:intron 35.0%
TATGGCATGGATCAATCTAT+TGG - chr6_4:18933919-18933938 Msa0980540:intron 35.0%
!!! GTTGGATTTGGTTTTCAAAC+TGG + chr6_4:18934066-18934085 None:intergenic 35.0%
GAAAACCAAATCCAACTTTC+AGG - chr6_4:18934070-18934089 Msa0980540:intron 35.0%
!! GGTTTGACTTGAACATAATG+TGG - chr6_4:18934158-18934177 Msa0980540:intron 35.0%
! TTCTAAAGAAAACGACAGAC+AGG + chr6_4:18934481-18934500 None:intergenic 35.0%
!!! TCTGTCGTTTTCTTTAGAAG+CGG - chr6_4:18934482-18934501 Msa0980540:intron 35.0%
TTAATCTTAAGAGGAGTTGG+AGG + chr6_4:18934539-18934558 None:intergenic 35.0%
CTATGCCCAAGAAAAACTAA+AGG + chr6_4:18934685-18934704 None:intergenic 35.0%
CTCCTTATTGAGACTTCTAT+AGG - chr6_4:18934723-18934742 Msa0980540:intron 35.0%
GCACGTATAGAAACCATATA+AGG - chr6_4:18934752-18934771 Msa0980540:intron 35.0%
TTATCAATTGCACCACAAGT+AGG + chr6_4:18934879-18934898 None:intergenic 35.0%
ATGACATTGTGGATCTCAAA+AGG + chr6_4:18934957-18934976 None:intergenic 35.0%
CGACACTTCTCTACAATTAA+TGG - chr6_4:18934982-18935001 Msa0980540:intron 35.0%
CGTTATAAATATAACCCTGG+TGG - chr6_4:18935060-18935079 Msa0980540:intron 35.0%
TAAATACCATTTGACCACCA+GGG + chr6_4:18935077-18935096 None:intergenic 35.0%
GTGGTCAAATGGTATTTACA+AGG - chr6_4:18935079-18935098 Msa0980540:CDS 35.0%
CAAATGGTATTTACAAGGCA+AGG - chr6_4:18935084-18935103 Msa0980540:CDS 35.0%
AGGTAACTAGCATCTTAAGA+AGG + chr6_4:18935187-18935206 None:intergenic 35.0%
GATGGAAGTTGTAAATTACG+AGG + chr6_4:18935207-18935226 None:intergenic 35.0%
TTATTTACGTGTTAGTGGCT+TGG + chr6_4:18935263-18935282 None:intergenic 35.0%
TCTAATTGACCACCTTCATT+AGG + chr6_4:18935366-18935385 None:intergenic 35.0%
CAACAATAGTCTATGTAGCA+CGG + chr6_4:18935509-18935528 None:intergenic 35.0%
TGGTCAATCCACCATTTAAT+TGG + chr6_4:18935576-18935595 None:intergenic 35.0%
CTGTGGAGTTAAAAATTACC+AGG + chr6_4:18935788-18935807 None:intergenic 35.0%
TTAGTAAGATCAGCATTCTG+TGG + chr6_4:18935805-18935824 None:intergenic 35.0%
TGATCTTACTAATGCCAATC+TGG - chr6_4:18935813-18935832 Msa0980540:intron 35.0%
!!! CCTGCTACTTTTTCCAATAT+AGG + chr6_4:18935886-18935905 None:intergenic 35.0%
CCTATATTGGAAAAAGTAGC+AGG - chr6_4:18935883-18935902 Msa0980540:intron 35.0%
ATAGGTAGAGAGCAAATACA+TGG + chr6_4:18936115-18936134 None:intergenic 35.0%
GACTCTTATCATTATGACTG+GGG + chr6_4:18936379-18936398 None:intergenic 35.0%
AAGGGATTCGTGTATAGAAA+GGG + chr6_4:18936417-18936436 None:intergenic 35.0%
! GCAATTTTGTCAAACCTCAA+GGG + chr6_4:18936435-18936454 None:intergenic 35.0%
! TGCAATTTTGTCAAACCTCA+AGG + chr6_4:18936436-18936455 None:intergenic 35.0%
AAGGTTAGCATTCTTCAACT+TGG + chr6_4:18936766-18936785 None:intergenic 35.0%
AACAGGTGAACATAGTCAAA+AGG + chr6_4:18936907-18936926 None:intergenic 35.0%
! TAGTTCTATGCCAATACAGA+AGG + chr6_4:18937126-18937145 None:intergenic 35.0%
ATGTACTAAATAGCGTATCG+CGG + chr6_4:18937289-18937308 None:intergenic 35.0%
CCAATGTGATTCTATAAGGT+AGG + chr6_4:18937430-18937449 None:intergenic 35.0%
CCTACCTTATAGAATCACAT+TGG - chr6_4:18937427-18937446 Msa0980540:intron 35.0%
GTCTGAAAGCTAACAATAAG+AGG + chr6_4:18937518-18937537 None:intergenic 35.0%
GCATAAATTAAGCCAACACA+AGG - chr6_4:18937543-18937562 Msa0980540:intron 35.0%
!!! CCGTTCCTTTTTTATCAATC+AGG - chr6_4:18937617-18937636 Msa0980540:intron 35.0%
TTTATCAATCAGGACTTGGA+AGG - chr6_4:18937627-18937646 Msa0980540:intron 35.0%
CGGAGCAATCAGATAATATT+TGG - chr6_4:18937677-18937696 Msa0980540:CDS 35.0%
! CGTTGATTGATGTTTATGGT+TGG - chr6_4:18937830-18937849 Msa0980540:intron 35.0%
GACGATCTTCTCTAACATTT+AGG - chr6_4:18937864-18937883 Msa0980540:CDS 35.0%
! AAATTATTAGCCGTGTCGGT+CGG + chr6_4:18929461-18929480 None:intergenic 40.0%
AAATAAGCTATAGGCTCGTG+AGG - chr6_4:18929793-18929812 Msa0980540:intron 40.0%
AGATTATAGCTGACGGCTTA+TGG + chr6_4:18930485-18930504 None:intergenic 40.0%
CAACAATTGAGAGTGAGTGT+TGG - chr6_4:18930747-18930766 Msa0980540:intron 40.0%
! ACAATTGAGAGTGAGTGTTG+GGG - chr6_4:18930749-18930768 Msa0980540:intron 40.0%
! TTGTGGAAACTTGGATTAGG+TGG - chr6_4:18930793-18930812 Msa0980540:intron 40.0%
AGAAGAGTAGATCAGATAGG+GGG - chr6_4:18930855-18930874 Msa0980540:intron 40.0%
TTAGAGGCAGAGAAAGACTT+AGG - chr6_4:18930889-18930908 Msa0980540:intron 40.0%
TAGAGGCAGAGAAAGACTTA+GGG - chr6_4:18930890-18930909 Msa0980540:intron 40.0%
GGGGACTAAAAAACTGAAAC+AGG - chr6_4:18931035-18931054 Msa0980540:intron 40.0%
TAGAGTTTAATGTGCTGGAC+AGG - chr6_4:18931168-18931187 Msa0980540:intron 40.0%
AGAGTTTAATGTGCTGGACA+GGG - chr6_4:18931169-18931188 Msa0980540:intron 40.0%
TCGAGTATTAGCCCTTAGTA+TGG + chr6_4:18931251-18931270 None:intergenic 40.0%
TGTCGAAAGCAAACTACACA+TGG + chr6_4:18931343-18931362 None:intergenic 40.0%
! TTAGTTCTCGGAGACCAAAT+AGG - chr6_4:18931516-18931535 Msa0980540:intron 40.0%
CTAAGACGGTAAGACCTATT+TGG + chr6_4:18931533-18931552 None:intergenic 40.0%
AATAGGTCTTACCGTCTTAG+TGG - chr6_4:18931533-18931552 Msa0980540:intron 40.0%
GTGACAAGAAACCACTAAGA+CGG + chr6_4:18931547-18931566 None:intergenic 40.0%
GATTGTGATATGAGACCTCA+AGG - chr6_4:18931623-18931642 Msa0980540:intron 40.0%
!! ATTTGTTGATTTGGGGACAG+TGG - chr6_4:18931712-18931731 Msa0980540:intron 40.0%
TAATGTGTGTTTGCATCGCA+GGG - chr6_4:18931735-18931754 Msa0980540:intron 40.0%
CACAAGTAGCTGATAGTACT+CGG + chr6_4:18931874-18931893 None:intergenic 40.0%
GCATTCTCATCTCTCTTACT+TGG - chr6_4:18932187-18932206 Msa0980540:intron 40.0%
TTGCTACGTCCTAAACTAGT+AGG + chr6_4:18932271-18932290 None:intergenic 40.0%
TCCAGAATACAACTTGCACA+TGG - chr6_4:18932308-18932327 Msa0980540:intron 40.0%
TCCATGTGCAAGTTGTATTC+TGG + chr6_4:18932312-18932331 None:intergenic 40.0%
CAGTACGTGTCAATTCTGTA+CGG + chr6_4:18932527-18932546 None:intergenic 40.0%
GTATACAATCTGAGAGAGTC+AGG - chr6_4:18932559-18932578 Msa0980540:intron 40.0%
TTTCGAGGGGTTAATCTTTC+TGG - chr6_4:18932582-18932601 Msa0980540:intron 40.0%
GCATTTGAAGAATGCACCAA+AGG - chr6_4:18932900-18932919 Msa0980540:intron 40.0%
AATGTAAGGGTTGAAGTTGG+TGG + chr6_4:18933066-18933085 None:intergenic 40.0%
ACATCCCTAAGTATGAAGAC+TGG + chr6_4:18933214-18933233 None:intergenic 40.0%
ATATACACGCTTGAATGGAC+TGG + chr6_4:18933245-18933264 None:intergenic 40.0%
CTTTGGCTGGACAATAAAGT+TGG + chr6_4:18933368-18933387 None:intergenic 40.0%
CAACTTTATTGTCCAGCCAA+AGG - chr6_4:18933366-18933385 Msa0980540:intron 40.0%
GGGAAGATGTGAATTTACTG+GGG - chr6_4:18933710-18933729 Msa0980540:intron 40.0%
CTTCAAAGCGCAAATCTACA+AGG - chr6_4:18933768-18933787 Msa0980540:CDS 40.0%
TGCCATAGTGAGATAAGGTT+TGG + chr6_4:18933906-18933925 None:intergenic 40.0%
AACCTTATCTCACTATGGCA+TGG - chr6_4:18933906-18933925 Msa0980540:intron 40.0%
ATCCATGCCATAGTGAGATA+AGG + chr6_4:18933911-18933930 None:intergenic 40.0%
GGTAACCTGAAAGTTGGATT+TGG + chr6_4:18934078-18934097 None:intergenic 40.0%
TAGGATGGTAACCTGAAAGT+TGG + chr6_4:18934084-18934103 None:intergenic 40.0%
!! ACTTTCAGGTTACCATCCTA+TGG - chr6_4:18934084-18934103 Msa0980540:intron 40.0%
AATATTATGCCGGATGCCAT+AGG + chr6_4:18934103-18934122 None:intergenic 40.0%
TTAGTAGGATGTAGCTTCTG+TGG - chr6_4:18934271-18934290 Msa0980540:intron 40.0%
TTGCACCACAAGTAGGATTA+GGG + chr6_4:18934872-18934891 None:intergenic 40.0%
ATTGCACCACAAGTAGGATT+AGG + chr6_4:18934873-18934892 None:intergenic 40.0%
! GCTCAAATTTAAAGCAGCAC+AGG + chr6_4:18934913-18934932 None:intergenic 40.0%
TTATAACGTTGAGTAGGGCA+AGG + chr6_4:18935048-18935067 None:intergenic 40.0%
ATATAACCCTGGTGGTCAAA+TGG - chr6_4:18935068-18935087 Msa0980540:CDS 40.0%
GTAAATACCATTTGACCACC+AGG + chr6_4:18935078-18935097 None:intergenic 40.0%
! GTGGATTGACCACCTTAATT+TGG - chr6_4:18935584-18935603 Msa0980540:intron 40.0%
TCTTACTAATGCCAATCTGG+AGG - chr6_4:18935816-18935835 Msa0980540:intron 40.0%
CTTACTAATGCCAATCTGGA+GGG - chr6_4:18935817-18935836 Msa0980540:intron 40.0%
TCTGGAAGGAGCAAATTTGA+AGG - chr6_4:18935846-18935865 Msa0980540:intron 40.0%
! TCATAAGGTGTCTCAGTCAT+GGG + chr6_4:18936077-18936096 None:intergenic 40.0%
! ATCATAAGGTGTCTCAGTCA+TGG + chr6_4:18936078-18936097 None:intergenic 40.0%
TCAAGGCAGTAATCTCATTG+TGG + chr6_4:18936298-18936317 None:intergenic 40.0%
AGATTACTGCCTTGAGACAT+AGG - chr6_4:18936303-18936322 Msa0980540:intron 40.0%
GATTACTGCCTTGAGACATA+GGG - chr6_4:18936304-18936323 Msa0980540:intron 40.0%
AATTGTGACCCTATGTCTCA+AGG + chr6_4:18936315-18936334 None:intergenic 40.0%
CAAGGGATTCGTGTATAGAA+AGG + chr6_4:18936418-18936437 None:intergenic 40.0%
TTCTATACACGAATCCCTTG+AGG - chr6_4:18936418-18936437 Msa0980540:intron 40.0%
TTGACTATGTTCACCTGTTG+TGG - chr6_4:18936908-18936927 Msa0980540:intron 40.0%
AGAAAAATCAGGACCACAAC+AGG + chr6_4:18936924-18936943 None:intergenic 40.0%
! AAGGATTTCCCTGTTTTGCA+GGG + chr6_4:18937107-18937126 None:intergenic 40.0%
ACAGGGAAATCCTTCTGTAT+TGG - chr6_4:18937113-18937132 Msa0980540:intron 40.0%
!! GGTAAAAACTCGTGCTGTTT+CGG + chr6_4:18937189-18937208 None:intergenic 40.0%
GCGAAATCATGTGTATTTCC+TGG - chr6_4:18937482-18937501 Msa0980540:intron 40.0%
ATAAGAGGACAACAGAAACC+AGG + chr6_4:18937503-18937522 None:intergenic 40.0%
ATTAAGCCAACACAAGGAGA+TGG - chr6_4:18937549-18937568 Msa0980540:intron 40.0%
ATCTTTCCATCTCCTTGTGT+TGG + chr6_4:18937558-18937577 None:intergenic 40.0%
AATATTGAGAAGTGGGGATG+TGG - chr6_4:18937719-18937738 Msa0980540:CDS 40.0%
TTCTCATGAAGTTGTGCAAC+TGG - chr6_4:18937806-18937825 Msa0980540:intron 40.0%
TCTCATGAAGTTGTGCAACT+GGG - chr6_4:18937807-18937826 Msa0980540:intron 40.0%
!! TGGGCGTTGATTGATGTTTA+TGG - chr6_4:18937826-18937845 Msa0980540:intron 40.0%
TGTTAGAGAAGATCGTCAAC+AGG + chr6_4:18937861-18937880 None:intergenic 40.0%
TTGCAAGGGCTCTACTTGTT+CGG + chr6_4:18928923-18928942 None:intergenic 45.0%
TTCATCGCACAAAGGAAGGA+AGG + chr6_4:18929032-18929051 None:intergenic 45.0%
TTCCTTCCTTTGTGCGATGA+AGG - chr6_4:18929031-18929050 Msa0980540:three_prime_UTR 45.0%
ACGAAGCGCGGAAGATAAAT+CGG + chr6_4:18929066-18929085 None:intergenic 45.0%
TCGCAGGAGGAAAGAAATTC+TGG - chr6_4:18929194-18929213 Msa0980540:three_prime_UTR 45.0%
!! ATAGCAGCGAGCATTGAATC+TGG + chr6_4:18929250-18929269 None:intergenic 45.0%
TGGGATCTTGAGAGAGAGTA+TGG + chr6_4:18929285-18929304 None:intergenic 45.0%
CTTGCAATGAAGTCCGGATA+CGG - chr6_4:18929419-18929438 Msa0980540:intron 45.0%
ACTAGGACATGCATAATCCG+AGG - chr6_4:18929554-18929573 Msa0980540:intron 45.0%
TATGAAGCACAGACACTCCT+CGG + chr6_4:18929574-18929593 None:intergenic 45.0%
ATAGGCTCGTGAGGAAATGA+CGG - chr6_4:18929802-18929821 Msa0980540:intron 45.0%
CGTAGACAAGAATGTAGCGT+TGG - chr6_4:18930686-18930705 Msa0980540:intron 45.0%
! AGAATGTAGCGTTGGATGTG+TGG - chr6_4:18930694-18930713 Msa0980540:intron 45.0%
GGGGGTAGTCAAATCATTAG+AGG - chr6_4:18930873-18930892 Msa0980540:intron 45.0%
TAATGTGCTGGACAGGGATA+TGG - chr6_4:18931175-18931194 Msa0980540:intron 45.0%
TGAAAGACTTTGGGCTCAAG+TGG - chr6_4:18931201-18931220 Msa0980540:intron 45.0%
TCATCTGAAGGGCCATACTA+AGG - chr6_4:18931236-18931255 Msa0980540:intron 45.0%
CATCTGAAGGGCCATACTAA+GGG - chr6_4:18931237-18931256 Msa0980540:intron 45.0%
GTTTCTTGTCACGACCAGTT+GGG - chr6_4:18931555-18931574 Msa0980540:intron 45.0%
GTAATGTGTGTTTGCATCGC+AGG - chr6_4:18931734-18931753 Msa0980540:intron 45.0%
AATGTGTGTTTGCATCGCAG+GGG - chr6_4:18931736-18931755 Msa0980540:intron 45.0%
TATTCAGCTTCCTCGAGAGT+GGG + chr6_4:18931831-18931850 None:intergenic 45.0%
ATATTCAGCTTCCTCGAGAG+TGG + chr6_4:18931832-18931851 None:intergenic 45.0%
AAAGACAGGTATCCTTTGGC+TGG + chr6_4:18933381-18933400 None:intergenic 45.0%
TTTACTGGGGCAAATCTTCG+TGG - chr6_4:18933723-18933742 Msa0980540:intron 45.0%
! TTCGTGGTGCTTTATTGGCT+GGG - chr6_4:18933739-18933758 Msa0980540:intron 45.0%
ATCAACAATAGCCAGTGCTG+TGG - chr6_4:18933985-18934004 Msa0980540:intron 45.0%
AAGACAAATGGCATCAGCTG+CGG + chr6_4:18934797-18934816 None:intergenic 45.0%
GTCATCCCTAATCCTACTTG+TGG - chr6_4:18934864-18934883 Msa0980540:intron 45.0%
GGTATTTACAAGGCAAGGCA+TGG - chr6_4:18935089-18935108 Msa0980540:CDS 45.0%
! CATAAGGTGTCTCAGTCATG+GGG + chr6_4:18936076-18936095 None:intergenic 45.0%
! GTAATCTCATTGTGGTGCCA+AGG + chr6_4:18936290-18936309 None:intergenic 45.0%
TAGAACGGTCTCTTTGCTCA+TGG - chr6_4:18936343-18936362 Msa0980540:intron 45.0%
GCTTTGCACCCTGAGATATA+GGG + chr6_4:18936734-18936753 None:intergenic 45.0%
AGCTTTGCACCCTGAGATAT+AGG + chr6_4:18936735-18936754 None:intergenic 45.0%
CCAATTGTCTCAAACTGCAC+AGG + chr6_4:18937034-18937053 None:intergenic 45.0%
! CCTGTGCAGTTTGAGACAAT+TGG - chr6_4:18937031-18937050 Msa0980540:intron 45.0%
AGTTTGACACCCTGCAAAAC+AGG - chr6_4:18937095-18937114 Msa0980540:intron 45.0%
GTTTGACACCCTGCAAAACA+GGG - chr6_4:18937096-18937115 Msa0980540:intron 45.0%
! GAAGGATTTCCCTGTTTTGC+AGG + chr6_4:18937108-18937127 None:intergenic 45.0%
TCTGCGATTGTTGTCAACAC+TGG - chr6_4:18937393-18937412 Msa0980540:intron 45.0%
TTGGAAGGAGCAAAGCTTGA+TGG - chr6_4:18937642-18937661 Msa0980540:intron 45.0%
!! CTTGATGGTGCCAATTTGCT+CGG - chr6_4:18937657-18937676 Msa0980540:CDS 45.0%
TCTGATTGCTCCGAGCAAAT+TGG + chr6_4:18937670-18937689 None:intergenic 45.0%
!!! ATTTTATATTTTGAAAAAAA+TGG + chr6_4:18932213-18932232 None:intergenic 5.0%
!!! TTTTTTCAAAATATAAAATT+TGG - chr6_4:18932214-18932233 Msa0980540:intron 5.0%
!!! TTTTTCAAAATATAAAATTT+GGG - chr6_4:18932215-18932234 Msa0980540:intron 5.0%
GTCCTTCATCGCACAAAGGA+AGG + chr6_4:18929036-18929055 None:intergenic 50.0%
GGAAGTCCTTCATCGCACAA+AGG + chr6_4:18929040-18929059 None:intergenic 50.0%
GCGCGGAAGATAAATCGGAT+TGG + chr6_4:18929061-18929080 None:intergenic 50.0%
ATGCTCGCTGCTATGTTCAG+TGG - chr6_4:18929256-18929275 Msa0980540:exon 50.0%
GTCGTGTCTGTATCCGTATC+CGG + chr6_4:18929435-18929454 None:intergenic 50.0%
CACGACATGTGTCTGACACT+AGG - chr6_4:18929537-18929556 Msa0980540:intron 50.0%
GGTTTCTTGTCACGACCAGT+TGG - chr6_4:18931554-18931573 Msa0980540:intron 50.0%
CAATTGGTTAAGGGATGGCG+TGG - chr6_4:18931803-18931822 Msa0980540:intron 50.0%
TCTGAGAGAGTCAGGTTTCG+AGG - chr6_4:18932567-18932586 Msa0980540:intron 50.0%
CTGAGAGAGTCAGGTTTCGA+GGG - chr6_4:18932568-18932587 Msa0980540:intron 50.0%
TGAGAGAGTCAGGTTTCGAG+GGG - chr6_4:18932569-18932588 Msa0980540:intron 50.0%
!! TGGCATCGACCTCTCTAAAC+TGG - chr6_4:18932602-18932621 Msa0980540:intron 50.0%
! CTTCGTGGTGCTTTATTGGC+TGG - chr6_4:18933738-18933757 Msa0980540:intron 50.0%
ACACTACAATGCCACAGCAC+TGG + chr6_4:18933999-18934018 None:intergenic 50.0%
GGTTACCATCCTATGGCATC+CGG - chr6_4:18934091-18934110 Msa0980540:intron 50.0%
TTATGCCGGATGCCATAGGA+TGG + chr6_4:18934099-18934118 None:intergenic 50.0%
GTGTCGGGTGAATGACATTG+TGG + chr6_4:18934968-18934987 None:intergenic 50.0%
! CAGATTAGCTCCCTCCAGAT+TGG + chr6_4:18935830-18935849 None:intergenic 50.0%
CAATCTGGAGGGAGCTAATC+TGG - chr6_4:18935828-18935847 Msa0980540:intron 50.0%
AACGGTCTCTTTGCTCATGG+AGG - chr6_4:18936346-18936365 Msa0980540:intron 50.0%
GACGCAGATAAGCTCGTTGA+AGG + chr6_4:18936785-18936804 None:intergenic 50.0%
CACAGGCATCCGCCAATTAT+TGG + chr6_4:18937017-18937036 None:intergenic 50.0%
! TTTGCAGGGTGTCAAACTGC+AGG + chr6_4:18937093-18937112 None:intergenic 50.0%
TCCGCGCTTCGTCTCAACAT+CGG - chr6_4:18929074-18929093 Msa0980540:three_prime_UTR 55.0%
ACCGATGTTGAGACGAAGCG+CGG + chr6_4:18929078-18929097 None:intergenic 55.0%
!! TGTCGGTGTCGTGTCGATGT+CGG - chr6_4:18929513-18929532 Msa0980540:intron 55.0%
CCTGTAGATGTGCAGATCGC+AGG + chr6_4:18934303-18934322 None:intergenic 55.0%
CCTGCGATCTGCACATCTAC+AGG - chr6_4:18934300-18934319 Msa0980540:intron 55.0%
GGCATCAGCTGCGGAAAAGA+TGG + chr6_4:18934788-18934807 None:intergenic 55.0%
CTGGAGGGAGCTAATCTGGA+AGG - chr6_4:18935832-18935851 Msa0980540:intron 55.0%
ACACGACATGCCGACCGACA+CGG - chr6_4:18929448-18929467 Msa0980540:intron 60.0%
TGGCGTGGTGCCCACTCTCG+AGG - chr6_4:18931818-18931837 Msa0980540:intron 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 18928895 18938063 18928895 ID=Msa0980540;Name=Msa0980540
chr6_4 mRNA 18928895 18938063 18928895 ID=Msa0980540-mRNA-1;Parent=Msa0980540;Name=Msa0980540-mRNA-1;_AED=0.09;_eAED=0.09;_QI=130|1|1|1|0.72|0.66|12|371|302
chr6_4 exon 18928895 18929319 18928895 ID=Msa0980540-mRNA-1:exon:5889;Parent=Msa0980540-mRNA-1
chr6_4 exon 18930134 18930214 18930134 ID=Msa0980540-mRNA-1:exon:5888;Parent=Msa0980540-mRNA-1
chr6_4 exon 18931091 18931150 18931091 ID=Msa0980540-mRNA-1:exon:5887;Parent=Msa0980540-mRNA-1
chr6_4 exon 18932637 18932695 18932637 ID=Msa0980540-mRNA-1:exon:5886;Parent=Msa0980540-mRNA-1
chr6_4 exon 18933169 18933242 18933169 ID=Msa0980540-mRNA-1:exon:5885;Parent=Msa0980540-mRNA-1
chr6_4 exon 18933323 18933369 18933323 ID=Msa0980540-mRNA-1:exon:5884;Parent=Msa0980540-mRNA-1
chr6_4 exon 18933764 18933847 18933764 ID=Msa0980540-mRNA-1:exon:5883;Parent=Msa0980540-mRNA-1
chr6_4 exon 18934335 18934490 18934335 ID=Msa0980540-mRNA-1:exon:5882;Parent=Msa0980540-mRNA-1
chr6_4 exon 18935068 18935202 18935068 ID=Msa0980540-mRNA-1:exon:5881;Parent=Msa0980540-mRNA-1
chr6_4 exon 18937649 18937758 18937649 ID=Msa0980540-mRNA-1:exon:5880;Parent=Msa0980540-mRNA-1
chr6_4 exon 18937863 18938008 18937863 ID=Msa0980540-mRNA-1:exon:5879;Parent=Msa0980540-mRNA-1
chr6_4 exon 18938031 18938063 18938031 ID=Msa0980540-mRNA-1:exon:5878;Parent=Msa0980540-mRNA-1
chr6_4 five_prime_UTR 18938031 18938063 18938031 ID=Msa0980540-mRNA-1:five_prime_utr;Parent=Msa0980540-mRNA-1
chr6_4 five_prime_UTR 18937912 18938008 18937912 ID=Msa0980540-mRNA-1:five_prime_utr;Parent=Msa0980540-mRNA-1
chr6_4 CDS 18937863 18937911 18937863 ID=Msa0980540-mRNA-1:cds;Parent=Msa0980540-mRNA-1
chr6_4 CDS 18937649 18937758 18937649 ID=Msa0980540-mRNA-1:cds;Parent=Msa0980540-mRNA-1
chr6_4 CDS 18935068 18935202 18935068 ID=Msa0980540-mRNA-1:cds;Parent=Msa0980540-mRNA-1
chr6_4 CDS 18934335 18934490 18934335 ID=Msa0980540-mRNA-1:cds;Parent=Msa0980540-mRNA-1
chr6_4 CDS 18933764 18933847 18933764 ID=Msa0980540-mRNA-1:cds;Parent=Msa0980540-mRNA-1
chr6_4 CDS 18933323 18933369 18933323 ID=Msa0980540-mRNA-1:cds;Parent=Msa0980540-mRNA-1
chr6_4 CDS 18933169 18933242 18933169 ID=Msa0980540-mRNA-1:cds;Parent=Msa0980540-mRNA-1
chr6_4 CDS 18932637 18932695 18932637 ID=Msa0980540-mRNA-1:cds;Parent=Msa0980540-mRNA-1
chr6_4 CDS 18931091 18931150 18931091 ID=Msa0980540-mRNA-1:cds;Parent=Msa0980540-mRNA-1
chr6_4 CDS 18930134 18930214 18930134 ID=Msa0980540-mRNA-1:cds;Parent=Msa0980540-mRNA-1
chr6_4 CDS 18929266 18929319 18929266 ID=Msa0980540-mRNA-1:cds;Parent=Msa0980540-mRNA-1
chr6_4 three_prime_UTR 18928895 18929265 18928895 ID=Msa0980540-mRNA-1:three_prime_utr;Parent=Msa0980540-mRNA-1
Gene Sequence

>Msa0980540

ATGAAGGACTTCCAATCCGATTTATCTTCCGCGCTTCGTCTCAACATCGGAGGAAAGAAATTCTGGACAACGATCGATACAGTTACACAGCGTGAACCAGATTCAATGCTCGCTGCTATGTTCAGTGGTCGCCATACTCTCTCTCAAGATCCCAATAACGGGTATGTTTTTGTTGATAGGGATGGTAAGCACTTCAGACACATTCTCAATTGGTTAAGGGATGGCGTGGTGCCCACTCTCGAGGAAGCTGAATATTCAGAGCTGTTAAGGGAAGCCGAGTACTATCAGCTACTTGGGCTTATAGATGGAATCCAAGATGTCCTTAATAAGAGGAAGGAAGAAGAGGAGCTCCGTACAGAATTGACACGTACTGATATCATCAAATGTATACAATCTGAGAGAGTCAGGTTTCGAGGGGTTAATCTTTCTGGCATCGACCTCTCTAAACTGGATTTATCATTTGTGGATTTCAGCTATGCTTGTCTTAAAAATGTGTTCTTTTCACGAGCAAATCTTCAATGTGCAAAGTTTCGGGATGTTGATGCTGAGGGCTCCATCTTTCATAATGCAACTCTGCGTGAATGTGAATTTACTGGGGCAAATCTTCGTGGTGCTTTATTGGCTGGGACAAATCTTCAAAGCGCAAATCTACAAGATGCTTGTTTAGTAGGATGTAGCTTCTGTGGAGCAGACCTGCGATCTGCACATCTACAGAATGCTGATCTTACTAATGCCAATCTGGAGGGAGCTAATCTGGAAGGAGCAAATTTGAAGGGTGCAAAGCTGAACAGTGCCAAGTTGAAGAATGCTAACCTTCAACGAGCTTATCTGCGTCATGTTAATCTTCGAGATACAGACTTGGAAGGAGCAAAGCTTGATGGTGCCAATTTGCTCGGAGCAATCAGATAA

Protein sequence

>Msa0980540

MKDFQSDLSSALRLNIGGKKFWTTIDTVTQREPDSMLAAMFSGRHTLSQDPNNGYVFVDRDGKHFRHILNWLRDGVVPTLEEAEYSELLREAEYYQLLGLIDGIQDVLNKRKEEEELRTELTRTDIIKCIQSERVRFRGVNLSGIDLSKLDLSFVDFSYACLKNVFFSRANLQCAKFRDVDAEGSIFHNATLRECEFTGANLRGALLAGTNLQSANLQDACLVGCSFCGADLRSAHLQNADLTNANLEGANLEGANLKGAKLNSAKLKNANLQRAYLRHVNLRDTDLEGAKLDGANLLGAIR*