AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1281390


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1281390 MtrunA17_Chr8g0352081 86.301 73 10 0 38 110 1 73 2.09e-42 138
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 46 sgRNAs with CRISPR-Local

Find 152 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTTCTTGTGTTAGAAAT+TGG 0.117758 8_3:-20874832 None:intergenic
CCATGAACATGGGATGAATA+TGG 0.261157 8_3:-20874904 None:intergenic
AATATGGTTTGAAGAAAATA+AGG 0.262255 8_3:-20874888 None:intergenic
CAATTTGCACGGCCAGTATT+TGG 0.282415 8_3:-20875763 None:intergenic
CAAATACTGGCCGTGCAAAT+TGG 0.324012 8_3:+20875764 Msa1281390:CDS
ACCAAGGAATTGATGGATAT+TGG 0.325424 8_3:+20875689 Msa1281390:CDS
GTTTGAAGAAAATAAGGTTT+GGG 0.325527 8_3:-20874882 None:intergenic
AATGGAATGAGAAGAATAAT+AGG 0.329340 8_3:+20875740 Msa1281390:CDS
AGAATGCCCCTCCTTGTAGA+AGG 0.373133 8_3:+20875821 Msa1281390:CDS
CCACCTCACCAAGGAATTGA+TGG 0.390882 8_3:+20875682 Msa1281390:CDS
AAGAATAATAGGCCAAATAC+TGG 0.399175 8_3:+20875751 Msa1281390:CDS
TAACACAAGAAGAATCATAA+TGG 0.400261 8_3:+20874840 Msa1281390:CDS
CCATGTTCATGGAAATTTAG+AGG 0.404305 8_3:+20874915 Msa1281390:CDS
CCATATTCATCCCATGTTCA+TGG 0.406085 8_3:+20874904 Msa1281390:CDS
GGTTTGAAGAAAATAAGGTT+TGG 0.413578 8_3:-20874883 None:intergenic
TTCTTCTTGTGTTAGAAATT+GGG 0.416058 8_3:-20874831 None:intergenic
CAGGAGTAACTGTATACAAA+TGG 0.442462 8_3:+20875722 Msa1281390:CDS
TGGCATGTTTGTTATGATGA+TGG 0.447927 8_3:+20875847 Msa1281390:CDS
CCACTTTCTTGCTCTTTCCA+CGG 0.452311 8_3:+20875042 Msa1281390:CDS
TCCAATATCCATCAATTCCT+TGG 0.454274 8_3:-20875690 None:intergenic
TTAGTTTATGTTGGTATGAG+TGG 0.464795 8_3:-20875952 None:intergenic
CCTCTAAATTTCCATGAACA+TGG 0.482444 8_3:-20874915 None:intergenic
GGATATTGGAGTGATAAATC+AGG 0.497241 8_3:+20875703 Msa1281390:CDS
TCTTTCCACGGTCATACAAA+TGG 0.498540 8_3:+20875054 Msa1281390:CDS
GCCATCCCCTTCTACAAGGA+GGG 0.527807 8_3:-20875828 None:intergenic
CCATCAATTCCTTGGTGAGG+TGG 0.539650 8_3:-20875682 None:intergenic
CTTGTGTTAGAAATTGGGAA+GGG 0.553869 8_3:-20874826 None:intergenic
CTAATGTTCAAACAAAGAAA+CGG 0.561468 8_3:+20874977 Msa1281390:CDS
CCGTGGAAAGAGCAAGAAAG+TGG 0.561979 8_3:-20875042 None:intergenic
TGTGTTAGAAATTGGGAAGG+GGG 0.568484 8_3:-20874824 None:intergenic
GAATGCCCCTCCTTGTAGAA+GGG 0.569528 8_3:+20875822 Msa1281390:CDS
ACATGCCATCCCCTTCTACA+AGG 0.570581 8_3:-20875832 None:intergenic
TGAGAGAAAGATGATAACGT+TGG 0.576181 8_3:-20874778 None:intergenic
TTGTGTTAGAAATTGGGAAG+GGG 0.578970 8_3:-20874825 None:intergenic
TTTGAAGAAAATAAGGTTTG+GGG 0.585485 8_3:-20874881 None:intergenic
CTCTAAATTTCCATGAACAT+GGG 0.587547 8_3:-20874914 None:intergenic
TTGCAATGTTGTAGGAGACA+AGG 0.588692 8_3:+20875642 Msa1281390:intron
CCCCTCCTTGTAGAAGGGGA+TGG 0.589762 8_3:+20875827 Msa1281390:CDS
CCATCCCCTTCTACAAGGAG+GGG 0.594937 8_3:-20875827 None:intergenic
TCTTGTGTTAGAAATTGGGA+AGG 0.595691 8_3:-20874827 None:intergenic
TGCAATGTTGTAGGAGACAA+GGG 0.601961 8_3:+20875643 Msa1281390:intron
AATGCCCCTCCTTGTAGAAG+GGG 0.605961 8_3:+20875823 Msa1281390:CDS
TGCCATCCCCTTCTACAAGG+AGG 0.632608 8_3:-20875829 None:intergenic
TATCCATCAATTCCTTGGTG+AGG 0.649933 8_3:-20875685 None:intergenic
TCATATTCTCCACCTCACCA+AGG 0.665005 8_3:+20875673 Msa1281390:CDS
GCATACCATTTGTATGACCG+TGG 0.672386 8_3:-20875059 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAGTAATTAAATTACAT+AGG + chr8_3:20875430-20875449 Msa1281390:intron 10.0%
!! AAATAGTAATTAAATTACAT+AGG + chr8_3:20875430-20875449 Msa1281390:intron 10.0%
!! ATCAAATTACAAAGATAATT+TGG - chr8_3:20875374-20875393 None:intergenic 15.0%
!! AAAAAACTTATGTTAATACA+TGG - chr8_3:20875878-20875897 None:intergenic 15.0%
!! ATCAAATTACAAAGATAATT+TGG - chr8_3:20875374-20875393 None:intergenic 15.0%
!! AAAAAACTTATGTTAATACA+TGG - chr8_3:20875878-20875897 None:intergenic 15.0%
!! AATATGGTTTGAAGAAAATA+AGG - chr8_3:20874891-20874910 None:intergenic 20.0%
!! ACAATGCATAAATATATGTA+AGG - chr8_3:20875272-20875291 None:intergenic 20.0%
!! GAAAAATTGTATTATTCAGA+AGG - chr8_3:20875903-20875922 None:intergenic 20.0%
!! AATATGGTTTGAAGAAAATA+AGG - chr8_3:20874891-20874910 None:intergenic 20.0%
!! ACAATGCATAAATATATGTA+AGG - chr8_3:20875272-20875291 None:intergenic 20.0%
!! GAAAAATTGTATTATTCAGA+AGG - chr8_3:20875903-20875922 None:intergenic 20.0%
! TTCTTCTTGTGTTAGAAATT+GGG - chr8_3:20874834-20874853 None:intergenic 25.0%
! ATTCTTCTTGTGTTAGAAAT+TGG - chr8_3:20874835-20874854 None:intergenic 25.0%
! TAACACAAGAAGAATCATAA+TGG + chr8_3:20874840-20874859 Msa1281390:CDS 25.0%
! TTTGAAGAAAATAAGGTTTG+GGG - chr8_3:20874884-20874903 None:intergenic 25.0%
! GTTTGAAGAAAATAAGGTTT+GGG - chr8_3:20874885-20874904 None:intergenic 25.0%
! CTAATGTTCAAACAAAGAAA+CGG + chr8_3:20874977-20874996 Msa1281390:CDS 25.0%
! GTATTTCTCCAACATATATT+TGG - chr8_3:20875150-20875169 None:intergenic 25.0%
! ATAAATATATGTAAGGTTCG+AGG - chr8_3:20875265-20875284 None:intergenic 25.0%
! TACATAGGATAAATGTTACA+AGG + chr8_3:20875445-20875464 Msa1281390:intron 25.0%
!!! CTTTTAAGATTGTGTTATTG+AGG + chr8_3:20875521-20875540 Msa1281390:intron 25.0%
!! AGGAATTCTAATTGCATTTT+TGG + chr8_3:20875541-20875560 Msa1281390:intron 25.0%
! AATGGAATGAGAAGAATAAT+AGG + chr8_3:20875740-20875759 Msa1281390:CDS 25.0%
!!! ATCTTTTTTTCCAATTTGCA+CGG - chr8_3:20875777-20875796 None:intergenic 25.0%
! TTCTTCTTGTGTTAGAAATT+GGG - chr8_3:20874834-20874853 None:intergenic 25.0%
! ATTCTTCTTGTGTTAGAAAT+TGG - chr8_3:20874835-20874854 None:intergenic 25.0%
! TAACACAAGAAGAATCATAA+TGG + chr8_3:20874840-20874859 Msa1281390:CDS 25.0%
! TTTGAAGAAAATAAGGTTTG+GGG - chr8_3:20874884-20874903 None:intergenic 25.0%
! GTTTGAAGAAAATAAGGTTT+GGG - chr8_3:20874885-20874904 None:intergenic 25.0%
! CTAATGTTCAAACAAAGAAA+CGG + chr8_3:20874977-20874996 Msa1281390:CDS 25.0%
! GTATTTCTCCAACATATATT+TGG - chr8_3:20875150-20875169 None:intergenic 25.0%
! ATAAATATATGTAAGGTTCG+AGG - chr8_3:20875265-20875284 None:intergenic 25.0%
! TACATAGGATAAATGTTACA+AGG + chr8_3:20875445-20875464 Msa1281390:intron 25.0%
!!! CTTTTAAGATTGTGTTATTG+AGG + chr8_3:20875521-20875540 Msa1281390:intron 25.0%
!! AGGAATTCTAATTGCATTTT+TGG + chr8_3:20875541-20875560 Msa1281390:intron 25.0%
! AATGGAATGAGAAGAATAAT+AGG + chr8_3:20875740-20875759 Msa1281390:CDS 25.0%
!!! ATCTTTTTTTCCAATTTGCA+CGG - chr8_3:20875777-20875796 None:intergenic 25.0%
! CATAAGAGAAGAACTTTTGT+TGG + chr8_3:20874799-20874818 Msa1281390:CDS 30.0%
GGTTTGAAGAAAATAAGGTT+TGG - chr8_3:20874886-20874905 None:intergenic 30.0%
CTCTAAATTTCCATGAACAT+GGG - chr8_3:20874917-20874936 None:intergenic 30.0%
CTATGTAGCCAAATATATGT+TGG + chr8_3:20875139-20875158 Msa1281390:intron 30.0%
ATGTTGGAGAAATACTTTCA+TGG + chr8_3:20875155-20875174 Msa1281390:intron 30.0%
TATGCTAAATCGTTCTTTCA+TGG + chr8_3:20875222-20875241 Msa1281390:intron 30.0%
AGGATAAATGTTACAAGGAA+AGG + chr8_3:20875450-20875469 Msa1281390:intron 30.0%
GGATAAATGTTACAAGGAAA+GGG + chr8_3:20875451-20875470 Msa1281390:intron 30.0%
!! CAATCTTAAAAGCATCACAA+AGG - chr8_3:20875513-20875532 None:intergenic 30.0%
AAGAATAATAGGCCAAATAC+TGG + chr8_3:20875751-20875770 Msa1281390:CDS 30.0%
GTGCAAATTGGAAAAAAAGA+TGG + chr8_3:20875776-20875795 Msa1281390:CDS 30.0%
! CATAAGAGAAGAACTTTTGT+TGG + chr8_3:20874799-20874818 Msa1281390:CDS 30.0%
GGTTTGAAGAAAATAAGGTT+TGG - chr8_3:20874886-20874905 None:intergenic 30.0%
CTCTAAATTTCCATGAACAT+GGG - chr8_3:20874917-20874936 None:intergenic 30.0%
CTATGTAGCCAAATATATGT+TGG + chr8_3:20875139-20875158 Msa1281390:intron 30.0%
ATGTTGGAGAAATACTTTCA+TGG + chr8_3:20875155-20875174 Msa1281390:intron 30.0%
TATGCTAAATCGTTCTTTCA+TGG + chr8_3:20875222-20875241 Msa1281390:intron 30.0%
AGGATAAATGTTACAAGGAA+AGG + chr8_3:20875450-20875469 Msa1281390:intron 30.0%
GGATAAATGTTACAAGGAAA+GGG + chr8_3:20875451-20875470 Msa1281390:intron 30.0%
!! CAATCTTAAAAGCATCACAA+AGG - chr8_3:20875513-20875532 None:intergenic 30.0%
AAGAATAATAGGCCAAATAC+TGG + chr8_3:20875751-20875770 Msa1281390:CDS 30.0%
GTGCAAATTGGAAAAAAAGA+TGG + chr8_3:20875776-20875795 Msa1281390:CDS 30.0%
! TGAGAGAAAGATGATAACGT+TGG - chr8_3:20874781-20874800 None:intergenic 35.0%
TTGTGTTAGAAATTGGGAAG+GGG - chr8_3:20874828-20874847 None:intergenic 35.0%
CTTGTGTTAGAAATTGGGAA+GGG - chr8_3:20874829-20874848 None:intergenic 35.0%
TCTTGTGTTAGAAATTGGGA+AGG - chr8_3:20874830-20874849 None:intergenic 35.0%
CCTCTAAATTTCCATGAACA+TGG - chr8_3:20874918-20874937 None:intergenic 35.0%
CCATGTTCATGGAAATTTAG+AGG + chr8_3:20874915-20874934 Msa1281390:CDS 35.0%
AGTGTGTGGCTATAGAAAAA+GGG - chr8_3:20875099-20875118 None:intergenic 35.0%
TAGTGTGTGGCTATAGAAAA+AGG - chr8_3:20875100-20875119 None:intergenic 35.0%
TATAGCCACACACTATCTAT+AGG + chr8_3:20875105-20875124 Msa1281390:intron 35.0%
CTTATCCTATAGATAGTGTG+TGG - chr8_3:20875113-20875132 None:intergenic 35.0%
CTAAATCGTTCTTTCATGGT+CGG + chr8_3:20875226-20875245 Msa1281390:intron 35.0%
TAAATCGTTCTTTCATGGTC+GGG + chr8_3:20875227-20875246 Msa1281390:intron 35.0%
ATGAACGTTTGCAATGTTGT+AGG + chr8_3:20875634-20875653 Msa1281390:intron 35.0%
! ACCAAGGAATTGATGGATAT+TGG + chr8_3:20875689-20875708 Msa1281390:CDS 35.0%
TCCAATATCCATCAATTCCT+TGG - chr8_3:20875693-20875712 None:intergenic 35.0%
GGATATTGGAGTGATAAATC+AGG + chr8_3:20875703-20875722 Msa1281390:CDS 35.0%
CAGGAGTAACTGTATACAAA+TGG + chr8_3:20875722-20875741 Msa1281390:CDS 35.0%
!! TGGCATGTTTGTTATGATGA+TGG + chr8_3:20875847-20875866 Msa1281390:CDS 35.0%
! TGAGAGAAAGATGATAACGT+TGG - chr8_3:20874781-20874800 None:intergenic 35.0%
TTGTGTTAGAAATTGGGAAG+GGG - chr8_3:20874828-20874847 None:intergenic 35.0%
CTTGTGTTAGAAATTGGGAA+GGG - chr8_3:20874829-20874848 None:intergenic 35.0%
TCTTGTGTTAGAAATTGGGA+AGG - chr8_3:20874830-20874849 None:intergenic 35.0%
CCTCTAAATTTCCATGAACA+TGG - chr8_3:20874918-20874937 None:intergenic 35.0%
CCATGTTCATGGAAATTTAG+AGG + chr8_3:20874915-20874934 Msa1281390:CDS 35.0%
AGTGTGTGGCTATAGAAAAA+GGG - chr8_3:20875099-20875118 None:intergenic 35.0%
TAGTGTGTGGCTATAGAAAA+AGG - chr8_3:20875100-20875119 None:intergenic 35.0%
TATAGCCACACACTATCTAT+AGG + chr8_3:20875105-20875124 Msa1281390:intron 35.0%
CTTATCCTATAGATAGTGTG+TGG - chr8_3:20875113-20875132 None:intergenic 35.0%
CTAAATCGTTCTTTCATGGT+CGG + chr8_3:20875226-20875245 Msa1281390:intron 35.0%
TAAATCGTTCTTTCATGGTC+GGG + chr8_3:20875227-20875246 Msa1281390:intron 35.0%
ATGAACGTTTGCAATGTTGT+AGG + chr8_3:20875634-20875653 Msa1281390:intron 35.0%
! ACCAAGGAATTGATGGATAT+TGG + chr8_3:20875689-20875708 Msa1281390:CDS 35.0%
TCCAATATCCATCAATTCCT+TGG - chr8_3:20875693-20875712 None:intergenic 35.0%
GGATATTGGAGTGATAAATC+AGG + chr8_3:20875703-20875722 Msa1281390:CDS 35.0%
CAGGAGTAACTGTATACAAA+TGG + chr8_3:20875722-20875741 Msa1281390:CDS 35.0%
!! TGGCATGTTTGTTATGATGA+TGG + chr8_3:20875847-20875866 Msa1281390:CDS 35.0%
TGTGTTAGAAATTGGGAAGG+GGG - chr8_3:20874827-20874846 None:intergenic 40.0%
CCATGAACATGGGATGAATA+TGG - chr8_3:20874907-20874926 None:intergenic 40.0%
CCATATTCATCCCATGTTCA+TGG + chr8_3:20874904-20874923 Msa1281390:CDS 40.0%
TCTTTCCACGGTCATACAAA+TGG + chr8_3:20875054-20875073 Msa1281390:CDS 40.0%
AAATCGTTCTTTCATGGTCG+GGG + chr8_3:20875228-20875247 Msa1281390:intron 40.0%
TGAGCTTAGCTCAATTGGTA+AGG - chr8_3:20875295-20875314 None:intergenic 40.0%
AATGTTACAAGGAAAGGGCA+TGG + chr8_3:20875456-20875475 Msa1281390:intron 40.0%
TTGCAATGTTGTAGGAGACA+AGG + chr8_3:20875642-20875661 Msa1281390:intron 40.0%
TGCAATGTTGTAGGAGACAA+GGG + chr8_3:20875643-20875662 Msa1281390:intron 40.0%
TATCCATCAATTCCTTGGTG+AGG - chr8_3:20875688-20875707 None:intergenic 40.0%
TGTGTTAGAAATTGGGAAGG+GGG - chr8_3:20874827-20874846 None:intergenic 40.0%
CCATGAACATGGGATGAATA+TGG - chr8_3:20874907-20874926 None:intergenic 40.0%
CCATATTCATCCCATGTTCA+TGG + chr8_3:20874904-20874923 Msa1281390:CDS 40.0%
TCTTTCCACGGTCATACAAA+TGG + chr8_3:20875054-20875073 Msa1281390:CDS 40.0%
AAATCGTTCTTTCATGGTCG+GGG + chr8_3:20875228-20875247 Msa1281390:intron 40.0%
TGAGCTTAGCTCAATTGGTA+AGG - chr8_3:20875295-20875314 None:intergenic 40.0%
AATGTTACAAGGAAAGGGCA+TGG + chr8_3:20875456-20875475 Msa1281390:intron 40.0%
TTGCAATGTTGTAGGAGACA+AGG + chr8_3:20875642-20875661 Msa1281390:intron 40.0%
TGCAATGTTGTAGGAGACAA+GGG + chr8_3:20875643-20875662 Msa1281390:intron 40.0%
TATCCATCAATTCCTTGGTG+AGG - chr8_3:20875688-20875707 None:intergenic 40.0%
CCACTTTCTTGCTCTTTCCA+CGG + chr8_3:20875042-20875061 Msa1281390:CDS 45.0%
GCATACCATTTGTATGACCG+TGG - chr8_3:20875062-20875081 None:intergenic 45.0%
TCATATTCTCCACCTCACCA+AGG + chr8_3:20875673-20875692 Msa1281390:CDS 45.0%
CAATTTGCACGGCCAGTATT+TGG - chr8_3:20875766-20875785 None:intergenic 45.0%
CAAATACTGGCCGTGCAAAT+TGG + chr8_3:20875764-20875783 Msa1281390:CDS 45.0%
CCACTTTCTTGCTCTTTCCA+CGG + chr8_3:20875042-20875061 Msa1281390:CDS 45.0%
GCATACCATTTGTATGACCG+TGG - chr8_3:20875062-20875081 None:intergenic 45.0%
TCATATTCTCCACCTCACCA+AGG + chr8_3:20875673-20875692 Msa1281390:CDS 45.0%
CAATTTGCACGGCCAGTATT+TGG - chr8_3:20875766-20875785 None:intergenic 45.0%
CAAATACTGGCCGTGCAAAT+TGG + chr8_3:20875764-20875783 Msa1281390:CDS 45.0%
CCGTGGAAAGAGCAAGAAAG+TGG - chr8_3:20875045-20875064 None:intergenic 50.0%
CCTCGTGAGCTTAGCTCAAT+TGG - chr8_3:20875300-20875319 None:intergenic 50.0%
CCAATTGAGCTAAGCTCACG+AGG + chr8_3:20875297-20875316 Msa1281390:intron 50.0%
CCATCAATTCCTTGGTGAGG+TGG - chr8_3:20875685-20875704 None:intergenic 50.0%
CCACCTCACCAAGGAATTGA+TGG + chr8_3:20875682-20875701 Msa1281390:CDS 50.0%
AGAATGCCCCTCCTTGTAGA+AGG + chr8_3:20875821-20875840 Msa1281390:CDS 50.0%
GAATGCCCCTCCTTGTAGAA+GGG + chr8_3:20875822-20875841 Msa1281390:CDS 50.0%
AATGCCCCTCCTTGTAGAAG+GGG + chr8_3:20875823-20875842 Msa1281390:CDS 50.0%
ACATGCCATCCCCTTCTACA+AGG - chr8_3:20875835-20875854 None:intergenic 50.0%
CCGTGGAAAGAGCAAGAAAG+TGG - chr8_3:20875045-20875064 None:intergenic 50.0%
CCTCGTGAGCTTAGCTCAAT+TGG - chr8_3:20875300-20875319 None:intergenic 50.0%
CCAATTGAGCTAAGCTCACG+AGG + chr8_3:20875297-20875316 Msa1281390:intron 50.0%
CCATCAATTCCTTGGTGAGG+TGG - chr8_3:20875685-20875704 None:intergenic 50.0%
CCACCTCACCAAGGAATTGA+TGG + chr8_3:20875682-20875701 Msa1281390:CDS 50.0%
AGAATGCCCCTCCTTGTAGA+AGG + chr8_3:20875821-20875840 Msa1281390:CDS 50.0%
GAATGCCCCTCCTTGTAGAA+GGG + chr8_3:20875822-20875841 Msa1281390:CDS 50.0%
AATGCCCCTCCTTGTAGAAG+GGG + chr8_3:20875823-20875842 Msa1281390:CDS 50.0%
ACATGCCATCCCCTTCTACA+AGG - chr8_3:20875835-20875854 None:intergenic 50.0%
CCATCCCCTTCTACAAGGAG+GGG - chr8_3:20875830-20875849 None:intergenic 55.0%
GCCATCCCCTTCTACAAGGA+GGG - chr8_3:20875831-20875850 None:intergenic 55.0%
TGCCATCCCCTTCTACAAGG+AGG - chr8_3:20875832-20875851 None:intergenic 55.0%
CCATCCCCTTCTACAAGGAG+GGG - chr8_3:20875830-20875849 None:intergenic 55.0%
GCCATCCCCTTCTACAAGGA+GGG - chr8_3:20875831-20875850 None:intergenic 55.0%
TGCCATCCCCTTCTACAAGG+AGG - chr8_3:20875832-20875851 None:intergenic 55.0%
CCCCTCCTTGTAGAAGGGGA+TGG + chr8_3:20875827-20875846 Msa1281390:CDS 60.0%
CCCCTCCTTGTAGAAGGGGA+TGG + chr8_3:20875827-20875846 Msa1281390:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 20874738 20875959 20874738 ID=Msa1281390;Name=Msa1281390
chr8_3 mRNA 20874738 20875959 20874738 ID=Msa1281390-mRNA-1;Parent=Msa1281390;Name=Msa1281390-mRNA-1;_AED=0.00;_eAED=0.00;_QI=10|1|1|1|1|1|2|74|185
chr8_3 exon 20874738 20875075 20874738 ID=Msa1281390-mRNA-1:exon:7589;Parent=Msa1281390-mRNA-1
chr8_3 exon 20875656 20875959 20875656 ID=Msa1281390-mRNA-1:exon:7590;Parent=Msa1281390-mRNA-1
chr8_3 five_prime_UTR 20874738 20874747 20874738 ID=Msa1281390-mRNA-1:five_prime_utr;Parent=Msa1281390-mRNA-1
chr8_3 CDS 20874748 20875075 20874748 ID=Msa1281390-mRNA-1:cds;Parent=Msa1281390-mRNA-1
chr8_3 CDS 20875656 20875885 20875656 ID=Msa1281390-mRNA-1:cds;Parent=Msa1281390-mRNA-1
chr8_3 three_prime_UTR 20875886 20875959 20875886 ID=Msa1281390-mRNA-1:three_prime_utr;Parent=Msa1281390-mRNA-1
Gene Sequence

>Msa1281390

ATGTCATTTTCTAATTCTATTGACAAGAATCCAACGTTATCATCTTTCTCTCATAAGAGAAGAACTTTTGTTGGTGCCCCCTTCCCAATTTCTAACACAAGAAGAATCATAATGGATTTTGCAGTTAAATTATCCCCAAACCTTATTTTCTTCAAACCATATTCATCCCATGTTCATGGAAATTTAGAGGTCAAGTGCTGTTCACAGTCACAAAGCAGAGAAACTACATCTAATGTTCAAACAAAGAAACGGTGTTTGAGATGCAATACTCTTTATTCAGATCAACATAATTCTCCACTTTCTTGCTCTTTCCACGGTCATACAAATGGAGACAAGGGTCTATTTTCATATTCTCCACCTCACCAAGGAATTGATGGATATTGGAGTGATAAATCAGGAGTAACTGTATACAAATGGAATGAGAAGAATAATAGGCCAAATACTGGCCGTGCAAATTGGAAAAAAAGATGGAGTTGTTGTGCTGAATATGAAGAGAATGCCCCTCCTTGTAGAAGGGGATGGCATGTTTGTTATGATGATGGTTTCACCATGTATTAA

Protein sequence

>Msa1281390

MSFSNSIDKNPTLSSFSHKRRTFVGAPFPISNTRRIIMDFAVKLSPNLIFFKPYSSHVHGNLEVKCCSQSQSRETTSNVQTKKRCLRCNTLYSDQHNSPLSCSFHGHTNGDKGLFSYSPPHQGIDGYWSDKSGVTVYKWNEKNNRPNTGRANWKKRWSCCAEYEENAPPCRRGWHVCYDDGFTMY*