Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1310770 | GAU26200.1 | 94.017 | 234 | 2 | 1 | 1 | 234 | 1 | 222 | 1.20e-158 | 448 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1310770 | sp|P80269|NDUS8_SOLTU | 78.838 | 241 | 32 | 2 | 1 | 234 | 1 | 229 | 5.08e-135 | 381 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1310770 | A0A2Z6MRF6 | 94.017 | 234 | 2 | 1 | 1 | 234 | 1 | 222 | 5.75e-159 | 448 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000550 | Msa1310770 | 0.826277 | 2.963493e-54 | -8.615850e-47 |
Msa0011170 | Msa1310770 | -0.814483 | 1.505487e-51 | -8.615850e-47 |
Msa0011660 | Msa1310770 | 0.810437 | 1.153104e-50 | -8.615850e-47 |
Msa0017510 | Msa1310770 | -0.807709 | 4.427503e-50 | -8.615850e-47 |
Msa0024210 | Msa1310770 | 0.878679 | 2.310301e-69 | -8.615850e-47 |
Msa0031340 | Msa1310770 | -0.810243 | 1.270129e-50 | -8.615850e-47 |
Msa0052730 | Msa1310770 | -0.803501 | 3.382051e-49 | -8.615850e-47 |
Msa0054730 | Msa1310770 | 0.802550 | 5.319930e-49 | -8.615850e-47 |
Msa0063350 | Msa1310770 | 0.816184 | 6.304400e-52 | -8.615850e-47 |
Msa0079070 | Msa1310770 | -0.803350 | 3.636048e-49 | -8.615850e-47 |
Msa0095560 | Msa1310770 | -0.800468 | 1.421057e-48 | -8.615850e-47 |
Msa0114060 | Msa1310770 | -0.807262 | 5.509347e-50 | -8.615850e-47 |
Msa0120010 | Msa1310770 | 0.869357 | 3.291089e-66 | -8.615850e-47 |
Msa0120020 | Msa1310770 | 0.874499 | 6.439679e-68 | -8.615850e-47 |
Msa0120040 | Msa1310770 | 0.867931 | 9.510348e-66 | -8.615850e-47 |
Msa0617640 | Msa1310770 | -0.800631 | 1.316522e-48 | -8.615850e-47 |
Msa0626090 | Msa1310770 | -0.856972 | 2.240255e-62 | -8.615850e-47 |
Msa0640510 | Msa1310770 | 0.809283 | 2.042519e-50 | -8.615850e-47 |
Msa0661190 | Msa1310770 | 0.833033 | 6.729238e-56 | -8.615850e-47 |
Msa0663970 | Msa1310770 | -0.839428 | 1.593988e-57 | -8.615850e-47 |
Msa0672690 | Msa1310770 | -0.829420 | 5.198472e-55 | -8.615850e-47 |
Msa0703780 | Msa1310770 | -0.801250 | 9.836701e-49 | -8.615850e-47 |
Msa0718750 | Msa1310770 | -0.819721 | 1.000740e-52 | -8.615850e-47 |
Msa0721280 | Msa1310770 | -0.801821 | 7.512749e-49 | -8.615850e-47 |
Msa0729720 | Msa1310770 | -0.802298 | 5.993964e-49 | -8.615850e-47 |
Msa0731940 | Msa1310770 | -0.813951 | 1.973810e-51 | -8.615850e-47 |
Msa0740510 | Msa1310770 | -0.810146 | 1.332748e-50 | -8.615850e-47 |
Msa0744170 | Msa1310770 | 0.820103 | 8.185652e-53 | -8.615850e-47 |
Msa0745260 | Msa1310770 | 0.823579 | 1.283780e-53 | -8.615850e-47 |
Msa0750240 | Msa1310770 | -0.808598 | 2.863190e-50 | -8.615850e-47 |
Msa0757500 | Msa1310770 | 0.809302 | 2.023809e-50 | -8.615850e-47 |
Msa0760130 | Msa1310770 | -0.805012 | 1.639009e-49 | -8.615850e-47 |
Msa0764130 | Msa1310770 | 0.809513 | 1.822912e-50 | -8.615850e-47 |
Msa0777570 | Msa1310770 | 0.831111 | 2.009202e-55 | -8.615850e-47 |
Msa0794510 | Msa1310770 | 0.813723 | 2.216000e-51 | -8.615850e-47 |
Msa0810220 | Msa1310770 | -0.816221 | 6.184429e-52 | -8.615850e-47 |
Msa0820770 | Msa1310770 | -0.814150 | 1.784142e-51 | -8.615850e-47 |
Msa0820850 | Msa1310770 | -0.809824 | 1.563081e-50 | -8.615850e-47 |
Msa0827350 | Msa1310770 | 0.821617 | 3.671235e-53 | -8.615850e-47 |
Msa0127650 | Msa1310770 | -0.806763 | 7.024682e-50 | -8.615850e-47 |
Msa0140500 | Msa1310770 | 0.821585 | 3.733264e-53 | -8.615850e-47 |
Msa0150800 | Msa1310770 | -0.830870 | 2.302045e-55 | -8.615850e-47 |
Msa0157290 | Msa1310770 | -0.807541 | 4.806395e-50 | -8.615850e-47 |
Msa0183010 | Msa1310770 | 0.813204 | 2.881672e-51 | -8.615850e-47 |
Msa0199800 | Msa1310770 | 0.821386 | 4.149952e-53 | -8.615850e-47 |
Msa0208090 | Msa1310770 | -0.807297 | 5.414874e-50 | -8.615850e-47 |
Msa0215320 | Msa1310770 | 0.839978 | 1.146237e-57 | -8.615850e-47 |
Msa0218810 | Msa1310770 | -0.800094 | 1.692966e-48 | -8.615850e-47 |
Msa0220580 | Msa1310770 | -0.813336 | 2.695292e-51 | -8.615850e-47 |
Msa0223410 | Msa1310770 | 0.820995 | 5.108941e-53 | -8.615850e-47 |
Msa0230640 | Msa1310770 | 0.814604 | 1.415574e-51 | -8.615850e-47 |
Msa0236510 | Msa1310770 | 0.830283 | 3.204146e-55 | -8.615850e-47 |
Msa1228590 | Msa1310770 | -0.801177 | 1.018195e-48 | -8.615850e-47 |
Msa1244720 | Msa1310770 | 0.850911 | 1.250419e-60 | -8.615850e-47 |
Msa1246510 | Msa1310770 | -0.803883 | 2.817882e-49 | -8.615850e-47 |
Msa1249640 | Msa1310770 | 0.828475 | 8.809216e-55 | -8.615850e-47 |
Msa1253020 | Msa1310770 | -0.811365 | 7.261626e-51 | -8.615850e-47 |
Msa1254370 | Msa1310770 | 0.814425 | 1.550601e-51 | -8.615850e-47 |
Msa1255330 | Msa1310770 | -0.830383 | 3.029691e-55 | -8.615850e-47 |
Msa1257800 | Msa1310770 | 0.812487 | 4.136239e-51 | -8.615850e-47 |
Msa1259490 | Msa1310770 | 0.802612 | 5.166297e-49 | -8.615850e-47 |
Msa1259590 | Msa1310770 | 0.832184 | 1.092775e-55 | -8.615850e-47 |
Msa1282580 | Msa1310770 | 0.805962 | 1.036255e-49 | -8.615850e-47 |
Msa1284680 | Msa1310770 | -0.807851 | 4.129528e-50 | -8.615850e-47 |
Msa1294610 | Msa1310770 | 0.808180 | 3.515824e-50 | -8.615850e-47 |
Msa1295540 | Msa1310770 | 0.808579 | 2.889830e-50 | -8.615850e-47 |
Msa1295950 | Msa1310770 | -0.800891 | 1.164894e-48 | -8.615850e-47 |
Msa1296460 | Msa1310770 | 0.803065 | 4.164275e-49 | -8.615850e-47 |
Msa1299290 | Msa1310770 | 0.812741 | 3.638818e-51 | -8.615850e-47 |
Msa1310100 | Msa1310770 | 0.851870 | 6.694577e-61 | -8.615850e-47 |
Msa1310770 | Msa1317320 | 0.814937 | 1.194694e-51 | -8.615850e-47 |
Msa1310770 | Msa1325860 | 0.842383 | 2.674548e-58 | -8.615850e-47 |
Msa1310770 | Msa1332040 | 0.825671 | 4.127906e-54 | -8.615850e-47 |
Msa1310770 | Msa1353470 | -0.804356 | 2.246686e-49 | -8.615850e-47 |
Msa1310770 | Msa1374470 | -0.816102 | 6.575603e-52 | -8.615850e-47 |
Msa1310770 | Msa1376090 | 0.805981 | 1.026818e-49 | -8.615850e-47 |
Msa1310770 | Msa1377540 | 0.828572 | 8.346726e-55 | -8.615850e-47 |
Msa1310770 | Msa1403340 | -0.810260 | 1.259056e-50 | -8.615850e-47 |
Msa1310770 | Msa1445390 | 0.818541 | 1.857328e-52 | -8.615850e-47 |
Msa1310770 | Msa1445610 | 0.838130 | 3.453226e-57 | -8.615850e-47 |
Msa1310770 | Msa1449340 | 0.827817 | 1.268607e-54 | -8.615850e-47 |
Msa1310770 | Msa1451620 | 0.827560 | 1.462326e-54 | -8.615850e-47 |
Msa1310770 | Msa1466540 | -0.816479 | 5.414342e-52 | -8.615850e-47 |
Msa0373930 | Msa1310770 | -0.810662 | 1.031079e-50 | -8.615850e-47 |
Msa0376590 | Msa1310770 | -0.810620 | 1.053080e-50 | -8.615850e-47 |
Msa0379640 | Msa1310770 | -0.801628 | 8.231723e-49 | -8.615850e-47 |
Msa0381610 | Msa1310770 | 0.836550 | 8.762009e-57 | -8.615850e-47 |
Msa0390400 | Msa1310770 | 0.807341 | 5.300092e-50 | -8.615850e-47 |
Msa0412840 | Msa1310770 | -0.825087 | 5.676002e-54 | -8.615850e-47 |
Msa0433410 | Msa1310770 | 0.817117 | 3.894663e-52 | -8.615850e-47 |
Msa0440750 | Msa1310770 | -0.802542 | 5.339010e-49 | -8.615850e-47 |
Msa0444750 | Msa1310770 | 0.843531 | 1.322991e-58 | -8.615850e-47 |
Msa0455040 | Msa1310770 | -0.836772 | 7.693142e-57 | -8.615850e-47 |
Msa0465670 | Msa1310770 | 0.813823 | 2.105610e-51 | -8.615850e-47 |
Msa0466840 | Msa1310770 | 0.803918 | 2.771924e-49 | -8.615850e-47 |
Msa0469940 | Msa1310770 | 0.816721 | 4.778079e-52 | -8.615850e-47 |
Msa0477130 | Msa1310770 | 0.829845 | 4.098540e-55 | -8.615850e-47 |
Msa0479970 | Msa1310770 | -0.816896 | 4.364933e-52 | -8.615850e-47 |
Msa0993290 | Msa1310770 | -0.813627 | 2.326066e-51 | -8.615850e-47 |
Msa0993600 | Msa1310770 | -0.803954 | 2.724447e-49 | -8.615850e-47 |
Msa1002850 | Msa1310770 | -0.801461 | 8.904749e-49 | -8.615850e-47 |
Msa1006120 | Msa1310770 | 0.831986 | 1.222954e-55 | -8.615850e-47 |
Msa1018990 | Msa1310770 | 0.817447 | 3.282650e-52 | -8.615850e-47 |
Msa1019840 | Msa1310770 | 0.812439 | 4.237055e-51 | -8.615850e-47 |
Msa1033410 | Msa1310770 | 0.828278 | 9.825229e-55 | -8.615850e-47 |
Msa1036710 | Msa1310770 | 0.804414 | 2.185299e-49 | -8.615850e-47 |
Msa1041730 | Msa1310770 | -0.809719 | 1.646867e-50 | -8.615850e-47 |
Msa1043390 | Msa1310770 | -0.810485 | 1.125760e-50 | -8.615850e-47 |
Msa1043450 | Msa1310770 | -0.808573 | 2.898414e-50 | -8.615850e-47 |
Msa1045200 | Msa1310770 | -0.800850 | 1.187883e-48 | -8.615850e-47 |
Msa1048280 | Msa1310770 | 0.833701 | 4.583946e-56 | -8.615850e-47 |
Msa1068200 | Msa1310770 | 0.833226 | 6.021272e-56 | -8.615850e-47 |
Msa1073070 | Msa1310770 | 0.814347 | 1.613476e-51 | -8.615850e-47 |
Msa1075080 | Msa1310770 | 0.832072 | 1.164789e-55 | -8.615850e-47 |
Msa1075220 | Msa1310770 | 0.864409 | 1.241222e-64 | -8.615850e-47 |
Msa1076810 | Msa1310770 | 0.841648 | 4.182021e-58 | -8.615850e-47 |
Msa1078750 | Msa1310770 | 0.802039 | 6.779252e-49 | -8.615850e-47 |
Msa1079430 | Msa1310770 | -0.825378 | 4.844497e-54 | -8.615850e-47 |
Msa1080160 | Msa1310770 | -0.800235 | 1.585086e-48 | -8.615850e-47 |
Msa1100240 | Msa1310770 | 0.819925 | 8.988534e-53 | -8.615850e-47 |
Msa0292050 | Msa1310770 | -0.803187 | 3.929834e-49 | -8.615850e-47 |
Msa0294560 | Msa1310770 | 0.800710 | 1.268552e-48 | -8.615850e-47 |
Msa0302580 | Msa1310770 | 0.814807 | 1.276495e-51 | -8.615850e-47 |
Msa0306210 | Msa1310770 | 0.885014 | 1.170883e-71 | -8.615850e-47 |
Msa0334360 | Msa1310770 | -0.811332 | 7.383338e-51 | -8.615850e-47 |
Msa0340450 | Msa1310770 | -0.813374 | 2.643225e-51 | -8.615850e-47 |
Msa0344690 | Msa1310770 | 0.823884 | 1.089191e-53 | -8.615850e-47 |
Msa0350320 | Msa1310770 | 0.833555 | 4.985688e-56 | -8.615850e-47 |
Msa1116130 | Msa1310770 | 0.837171 | 6.083336e-57 | -8.615850e-47 |
Msa1119480 | Msa1310770 | -0.818054 | 2.394206e-52 | -8.615850e-47 |
Msa1121450 | Msa1310770 | 0.846172 | 2.565767e-59 | -8.615850e-47 |
Msa1121490 | Msa1310770 | -0.819694 | 1.015462e-52 | -8.615850e-47 |
Msa1124540 | Msa1310770 | 0.808070 | 3.709905e-50 | -8.615850e-47 |
Msa1130270 | Msa1310770 | 0.836363 | 9.780591e-57 | -8.615850e-47 |
Msa1131940 | Msa1310770 | 0.814726 | 1.330086e-51 | -8.615850e-47 |
Msa1137570 | Msa1310770 | -0.829368 | 5.352242e-55 | -8.615850e-47 |
Msa1139000 | Msa1310770 | 0.837114 | 6.289751e-57 | -8.615850e-47 |
Msa1144720 | Msa1310770 | 0.803481 | 3.415766e-49 | -8.615850e-47 |
Msa1145250 | Msa1310770 | 0.806500 | 7.983573e-50 | -8.615850e-47 |
Msa1154280 | Msa1310770 | -0.806469 | 8.102200e-50 | -8.615850e-47 |
Msa1156340 | Msa1310770 | 0.830988 | 2.152870e-55 | -8.615850e-47 |
Msa1157930 | Msa1310770 | 0.816575 | 5.152264e-52 | -8.615850e-47 |
Msa1162550 | Msa1310770 | 0.843626 | 1.248268e-58 | -8.615850e-47 |
Msa1163650 | Msa1310770 | 0.855010 | 8.402863e-62 | -8.615850e-47 |
Msa1173100 | Msa1310770 | -0.815256 | 1.014484e-51 | -8.615850e-47 |
Msa1183100 | Msa1310770 | 0.831704 | 1.435616e-55 | -8.615850e-47 |
Msa1186950 | Msa1310770 | 0.815963 | 7.061064e-52 | -8.615850e-47 |
Msa1201430 | Msa1310770 | 0.855339 | 6.742790e-62 | -8.615850e-47 |
Msa1202770 | Msa1310770 | 0.809338 | 1.987632e-50 | -8.615850e-47 |
Msa1211140 | Msa1310770 | 0.823541 | 1.310179e-53 | -8.615850e-47 |
Msa0484720 | Msa1310770 | -0.802268 | 6.081733e-49 | -8.615850e-47 |
Msa0522590 | Msa1310770 | 0.820765 | 5.768539e-53 | -8.615850e-47 |
Msa0523460 | Msa1310770 | -0.805088 | 1.580118e-49 | -8.615850e-47 |
Msa0528610 | Msa1310770 | 0.805955 | 1.039420e-49 | -8.615850e-47 |
Msa0548280 | Msa1310770 | 0.816726 | 4.765667e-52 | -8.615850e-47 |
Msa0563840 | Msa1310770 | -0.807862 | 4.108809e-50 | -8.615850e-47 |
Msa0566500 | Msa1310770 | 0.803511 | 3.366835e-49 | -8.615850e-47 |
Msa0574760 | Msa1310770 | 0.803434 | 3.492582e-49 | -8.615850e-47 |
Msa0585000 | Msa1310770 | 0.835655 | 1.479005e-56 | -8.615850e-47 |
Msa0585230 | Msa1310770 | -0.814957 | 1.182461e-51 | -8.615850e-47 |
Msa0843780 | Msa1310770 | 0.850038 | 2.198704e-60 | -8.615850e-47 |
Msa0844490 | Msa1310770 | -0.817354 | 3.444080e-52 | -8.615850e-47 |
Msa0849100 | Msa1310770 | -0.808390 | 3.170964e-50 | -8.615850e-47 |
Msa0861090 | Msa1310770 | -0.812933 | 3.303876e-51 | -8.615850e-47 |
Msa0864470 | Msa1310770 | 0.801060 | 1.076164e-48 | -8.615850e-47 |
Msa0865510 | Msa1310770 | 0.802207 | 6.258492e-49 | -8.615850e-47 |
Msa0876850 | Msa1310770 | 0.800128 | 1.666592e-48 | -8.615850e-47 |
Msa0880140 | Msa1310770 | -0.804008 | 2.654202e-49 | -8.615850e-47 |
Msa0922410 | Msa1310770 | -0.801822 | 7.511911e-49 | -8.615850e-47 |
Msa0924310 | Msa1310770 | -0.810182 | 1.308827e-50 | -8.615850e-47 |
Msa0931520 | Msa1310770 | -0.810483 | 1.127028e-50 | -8.615850e-47 |
Msa0933230 | Msa1310770 | -0.802442 | 5.600561e-49 | -8.615850e-47 |
Msa0942080 | Msa1310770 | 0.808777 | 2.621945e-50 | -8.615850e-47 |
Msa0942200 | Msa1310770 | -0.800287 | 1.546848e-48 | -8.615850e-47 |
Msa0942550 | Msa1310770 | 0.841514 | 4.538467e-58 | -8.615850e-47 |
Msa0942560 | Msa1310770 | 0.856189 | 3.806531e-62 | -8.615850e-47 |
Msa0946280 | Msa1310770 | 0.832502 | 9.112330e-56 | -8.615850e-47 |
Msa0946690 | Msa1310770 | 0.826434 | 2.718929e-54 | -8.615850e-47 |
Msa0947660 | Msa1310770 | -0.814007 | 1.917853e-51 | -8.615850e-47 |
Msa0969520 | Msa1310770 | -0.834554 | 2.803087e-56 | -8.615850e-47 |
Msa0974070 | Msa1310770 | -0.800462 | 1.425238e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1310770 | MtrunA17_Chr8g0337971 | 94.444 | 234 | 1 | 1 | 1 | 234 | 1 | 222 | 3.70e-162 | 447 |
Msa1310770 | MtrunA17_Chr4g0016231 | 32.787 | 122 | 64 | 3 | 92 | 212 | 38 | 142 | 2.38e-12 | 63.2 |
Msa1310770 | MtrunA17_Chr6g0466771 | 32.787 | 122 | 64 | 3 | 92 | 212 | 38 | 142 | 2.38e-12 | 63.2 |
Msa1310770 | MtrunA17_Chr7g0221871 | 32.787 | 122 | 64 | 3 | 92 | 212 | 38 | 142 | 2.38e-12 | 63.2 |
Msa1310770 | MtrunA17_Chr2g0324621 | 32.787 | 122 | 64 | 3 | 92 | 212 | 38 | 142 | 2.38e-12 | 63.2 |
Msa1310770 | MtrunA17_CPg0492271 | 32.787 | 122 | 64 | 3 | 92 | 212 | 38 | 142 | 2.38e-12 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1310770 | AT1G16700.1 | 79.487 | 234 | 36 | 1 | 1 | 234 | 1 | 222 | 6.66e-135 | 378 |
Msa1310770 | AT1G79010.1 | 77.778 | 234 | 40 | 1 | 1 | 234 | 1 | 222 | 1.19e-131 | 370 |
Msa1310770 | ATCG01090.1 | 33.088 | 136 | 73 | 3 | 78 | 212 | 24 | 142 | 1.20e-14 | 69.7 |
Find 81 sgRNAs with CRISPR-Local
Find 431 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTGGGCCATTGTTGTATTTA+TGG | 0.165568 | 8_4:-7379034 | Msa1310770:three_prime_UTR |
TGAAAATTTGTATGGATTAA+TGG | 0.224498 | 8_4:-7379081 | Msa1310770:three_prime_UTR |
TAGCCTTGAACTTTGGATAA+TGG | 0.286265 | 8_4:-7378901 | Msa1310770:three_prime_UTR |
GAGAAACGACAGACCTAATT+TGG | 0.303708 | 8_4:+7383803 | None:intergenic |
TCTGTAGAAAATTCAAAGTT+TGG | 0.316476 | 8_4:+7379426 | None:intergenic |
CGAAGGAAATTTCAAAGGAT+TGG | 0.317932 | 8_4:-7383211 | Msa1310770:CDS |
CTGCACAACCCTCAAAATTA+TGG | 0.327667 | 8_4:-7383855 | Msa1310770:CDS |
TCCTCAGATCAACCTTCTTC+AGG | 0.331392 | 8_4:-7384703 | Msa1310770:intron |
AACGATATTATCAGCGATAA+AGG | 0.338868 | 8_4:+7379164 | None:intergenic |
AAAGAGAAGCTGCTTGAAAA+TGG | 0.343625 | 8_4:-7379232 | Msa1310770:CDS |
AAACTTGTAGCCTTGAACTT+TGG | 0.347146 | 8_4:-7378908 | Msa1310770:three_prime_UTR |
AATGGTCTTGAAAATTTGTA+TGG | 0.358097 | 8_4:-7379089 | Msa1310770:three_prime_UTR |
CACCTCTACTCTACCAAATT+AGG | 0.367504 | 8_4:-7383816 | Msa1310770:intron |
CTTCCACTCTTATAGGGAAA+TGG | 0.373295 | 8_4:-7382188 | Msa1310770:intron |
CCTTCAACAATGGCATCAAC+TGG | 0.381113 | 8_4:+7379450 | None:intergenic |
TCTTATAGGGAAATGGTTGC+AGG | 0.386478 | 8_4:-7382181 | Msa1310770:intron |
CTCAATGGGCCTTTCTCAAA+TGG | 0.395763 | 8_4:+7382916 | None:intergenic |
GTTTAGGCTGTGGCAGGTCA+AGG | 0.399468 | 8_4:-7383879 | Msa1310770:intron |
TGCTTGAAAATGGTGATAGA+TGG | 0.410918 | 8_4:-7379222 | Msa1310770:CDS |
TCGTTGGATCTCTGCTTATT+CGG | 0.413670 | 8_4:-7379146 | Msa1310770:three_prime_UTR |
AGGGAAATGGTTGCAGGGTA+GGG | 0.427984 | 8_4:-7382175 | Msa1310770:CDS |
ATCAATTATCCATTTGAGAA+AGG | 0.435457 | 8_4:-7382925 | Msa1310770:CDS |
CCAGTTGATGCCATTGTTGA+AGG | 0.439001 | 8_4:-7379450 | Msa1310770:CDS |
ATTTCAAAGGATTGGAGTAC+AGG | 0.442999 | 8_4:-7383203 | Msa1310770:intron |
TTTCTCACCGAGCTTGTTCG+AGG | 0.455559 | 8_4:-7383067 | Msa1310770:CDS |
TCAATTGTTATTGCTTGAGC+AGG | 0.457553 | 8_4:+7379646 | None:intergenic |
GATAAAGGCTTTCAGATCTC+AGG | 0.462781 | 8_4:+7379179 | None:intergenic |
TAGGGAAATGGTTGCAGGGT+AGG | 0.474308 | 8_4:-7382176 | Msa1310770:CDS |
ATGCTTGTTTAGGCTGTGGC+AGG | 0.482178 | 8_4:-7383885 | Msa1310770:intron |
CCACGGAAACGAGGACTCAA+TGG | 0.482939 | 8_4:+7382901 | None:intergenic |
AAACCGCAGAGGACGAAGAA+AGG | 0.486005 | 8_4:-7383244 | Msa1310770:intron |
CATTGAGTCCTCGTTTCCGT+GGG | 0.492044 | 8_4:-7382900 | Msa1310770:CDS |
TTTATCGCTGATAATATCGT+TGG | 0.495660 | 8_4:-7379162 | Msa1310770:exon |
CCATTGAGTCCTCGTTTCCG+TGG | 0.498621 | 8_4:-7382901 | Msa1310770:CDS |
TTTAGGCTGTGGCAGGTCAA+GGG | 0.501802 | 8_4:-7383878 | Msa1310770:intron |
AACCGCAGAGGACGAAGAAA+GGG | 0.505696 | 8_4:-7383243 | Msa1310770:intron |
AGCAATAACAATTGAGGCTG+AGG | 0.506884 | 8_4:-7379638 | Msa1310770:CDS |
CACGGAAACGAGGACTCAAT+GGG | 0.507055 | 8_4:+7382902 | None:intergenic |
GGGAAATGGTTGCAGGGTAG+GGG | 0.517751 | 8_4:-7382174 | Msa1310770:CDS |
GAGGCTGAGGAGCGTGAAGA+TGG | 0.517969 | 8_4:-7379625 | Msa1310770:CDS |
TAAATAAAATGATCGGTGAA+TGG | 0.519570 | 8_4:-7379107 | Msa1310770:three_prime_UTR |
GTTCCATTATCCAAAGTTCA+AGG | 0.519995 | 8_4:+7378898 | None:intergenic |
AAAGTTTGGCCCTTCAACAA+TGG | 0.520084 | 8_4:+7379440 | None:intergenic |
TGCTTGCAAACTTTGTGAAG+CGG | 0.536589 | 8_4:-7382833 | Msa1310770:intron |
GAGAGAGAGATACCTGAAGA+AGG | 0.539105 | 8_4:+7384691 | None:intergenic |
GCACTCAGAAGATATCCAAC+AGG | 0.542096 | 8_4:-7382871 | Msa1310770:CDS |
TCTGAGATGAAGAGAAGAGA+GGG | 0.542963 | 8_4:+7384756 | None:intergenic |
ATGCAACGTTCCTCTCCTGT+TGG | 0.543622 | 8_4:+7382856 | None:intergenic |
ACTTGCGAAGGAAATTTCAA+AGG | 0.546416 | 8_4:-7383216 | Msa1310770:CDS |
TCGTTTCGTGTTCCTCTCTG+TGG | 0.558223 | 8_4:-7384730 | Msa1310770:five_prime_UTR |
AAATGGCCGCATTCTTAGCT+CGG | 0.559379 | 8_4:-7384520 | Msa1310770:CDS |
GGGCTGGACTCCTCAAAGCC+CGG | 0.562825 | 8_4:-7384821 | None:intergenic |
TGCTCAAGCAATAACAATTG+AGG | 0.563934 | 8_4:-7379644 | Msa1310770:CDS |
ATGACCAAGTGCATCTATTG+TGG | 0.582682 | 8_4:-7379492 | Msa1310770:CDS |
TTCTGAGTGCATGTTCCCCA+CGG | 0.584009 | 8_4:+7382884 | None:intergenic |
CTTCAACAATGGCATCAACT+GGG | 0.587038 | 8_4:+7379451 | None:intergenic |
CATTAGACCTCGAACAAGCT+CGG | 0.587841 | 8_4:+7383060 | None:intergenic |
GCACTGATAAATAAAATGAT+CGG | 0.591056 | 8_4:-7379114 | Msa1310770:three_prime_UTR |
GCTTGAAAATGGTGATAGAT+GGG | 0.594111 | 8_4:-7379221 | Msa1310770:CDS |
CAGTTGATGCCATTGTTGAA+GGG | 0.594171 | 8_4:-7379449 | Msa1310770:CDS |
GAGGAATCTTACAAGCTGGC+GGG | 0.598298 | 8_4:+7384475 | None:intergenic |
TTACTGACCGAGTTGTCCTA+CGG | 0.600425 | 8_4:+7379599 | None:intergenic |
ATGGCAGCCGTAGGACAACT+CGG | 0.602662 | 8_4:-7379606 | Msa1310770:intron |
CTTATAGGGAAATGGTTGCA+GGG | 0.614348 | 8_4:-7382180 | Msa1310770:intron |
ACCTGAAGAAGGTTGATCTG+AGG | 0.617921 | 8_4:+7384702 | None:intergenic |
CTGAGATGAAGAGAAGAGAG+GGG | 0.618759 | 8_4:+7384757 | None:intergenic |
CTCTGAGATGAAGAGAAGAG+AGG | 0.620202 | 8_4:+7384755 | None:intergenic |
AGAGGAATCTTACAAGCTGG+CGG | 0.622954 | 8_4:+7384474 | None:intergenic |
GACCTAATTTGGTAGAGTAG+AGG | 0.629006 | 8_4:+7383814 | None:intergenic |
GGTAGGGGAAAGTAACGGTA+AGG | 0.634293 | 8_4:-7382159 | Msa1310770:intron |
AAATCCACAATAGATGCACT+TGG | 0.636535 | 8_4:+7379488 | None:intergenic |
ACATGCCATAAATACAACAA+TGG | 0.637198 | 8_4:+7379029 | None:intergenic |
CAAGCGCACAATGTGTTACG+TGG | 0.650745 | 8_4:+7384787 | None:intergenic |
GCATGTTCCCCACGGAAACG+AGG | 0.652968 | 8_4:+7382892 | None:intergenic |
TGCAGGGTAGGGGAAAGTAA+CGG | 0.680558 | 8_4:-7382164 | Msa1310770:CDS |
CAGAAGATATCCAACAGGAG+AGG | 0.683452 | 8_4:-7382866 | Msa1310770:CDS |
ATTGAGTCCTCGTTTCCGTG+GGG | 0.686086 | 8_4:-7382899 | Msa1310770:CDS |
AGCGTGAAGATGGCAGCCGT+AGG | 0.695064 | 8_4:-7379615 | Msa1310770:CDS |
AGAAAGGGAGAAACTTGCGA+AGG | 0.699091 | 8_4:-7383228 | Msa1310770:CDS |
AGATTTCCGAGCTAAGAATG+CGG | 0.745512 | 8_4:+7384514 | None:intergenic |
TCTGAGGAGAATCCACAGAG+AGG | 0.759220 | 8_4:+7384718 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATACCAATAAAAATATTA+AGG | + | chr8_4:7379692-7379711 | None:intergenic | 10.0% |
!!! | AAATTAGATTTTCTTATTAT+AGG | + | chr8_4:7381628-7381647 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTTTTTTTTGAG+AGG | + | chr8_4:7382335-7382354 | None:intergenic | 10.0% |
!! | AAAAAAGATATAAACAATTA+TGG | + | chr8_4:7384344-7384363 | None:intergenic | 10.0% |
!! | ATAGAGTAAAAAATAATAAG+AGG | + | chr8_4:7379230-7379249 | None:intergenic | 15.0% |
!!! | ATTAGATGTTTTTTATTGAT+GGG | + | chr8_4:7380263-7380282 | None:intergenic | 15.0% |
!!! | AATTAGATGTTTTTTATTGA+TGG | + | chr8_4:7380264-7380283 | None:intergenic | 15.0% |
!! | AAAAAATAGATATTCATCAA+GGG | + | chr8_4:7380407-7380426 | None:intergenic | 15.0% |
!! | AAAAAAATAGATATTCATCA+AGG | + | chr8_4:7380408-7380427 | None:intergenic | 15.0% |
!! | AAAATCAAATTGAAAATGAA+AGG | + | chr8_4:7380520-7380539 | None:intergenic | 15.0% |
!! | TAATTTAGATATTCCAAATA+AGG | - | chr8_4:7381135-7381154 | Msa1310770:intron | 15.0% |
!!! | ATTTTCTTATTATAGGAAAT+TGG | + | chr8_4:7381621-7381640 | None:intergenic | 15.0% |
!! | AAGAAAATCTAATTTCTTAA+TGG | - | chr8_4:7381633-7381652 | Msa1310770:intron | 15.0% |
!! | AGAAAATCTAATTTCTTAAT+GGG | - | chr8_4:7381634-7381653 | Msa1310770:intron | 15.0% |
!! | TAATTTAGATATTCCAAATA+AGG | - | chr8_4:7381135-7381154 | Msa1310770:intron | 15.0% |
!! | TAATTTAAATATCCCAAATA+AGG | - | chr8_4:7383484-7383503 | Msa1310770:intron | 15.0% |
!! | ATGGATATGTATAATATATT+TGG | + | chr8_4:7383884-7383903 | None:intergenic | 15.0% |
!! | TCAATATAAAGGAAATAAAA+AGG | + | chr8_4:7384296-7384315 | None:intergenic | 15.0% |
!!! | TCGTTCTTAATAGTTTTTTT+AGG | + | chr8_4:7379461-7379480 | None:intergenic | 20.0% |
!!! | GATGTCCTTAATATTTTTAT+TGG | - | chr8_4:7379684-7379703 | Msa1310770:intron | 20.0% |
!! | TTTATTGGTATAAGATTAAG+AGG | - | chr8_4:7379699-7379718 | Msa1310770:intron | 20.0% |
!! | AAAAATAGATATTCATCAAG+GGG | + | chr8_4:7380406-7380425 | None:intergenic | 20.0% |
!! | CATTGTTAAACTGAAAATAT+TGG | + | chr8_4:7380895-7380914 | None:intergenic | 20.0% |
!! | AGACAAATTTCTAATTCTTA+GGG | + | chr8_4:7381116-7381135 | None:intergenic | 20.0% |
!! | TAGACAAATTTCTAATTCTT+AGG | + | chr8_4:7381117-7381136 | None:intergenic | 20.0% |
!!! | ATCTAGATTTTATGCATAAT+CGG | - | chr8_4:7381234-7381253 | Msa1310770:intron | 20.0% |
!! | AGAGAGTTTGAATATAAAAT+TGG | + | chr8_4:7382231-7382250 | None:intergenic | 20.0% |
!! | TAATGTAGAATCAAATGTAT+AGG | - | chr8_4:7382385-7382404 | Msa1310770:intron | 20.0% |
!!! | ATAAACCTTTATTAGGTTTT+TGG | - | chr8_4:7382428-7382447 | Msa1310770:intron | 20.0% |
!!! | TTTGGAATATCTAAATTAGA+CGG | + | chr8_4:7381133-7381152 | None:intergenic | 20.0% |
!!! | AATAGCAGTTTGTTTTAATA+TGG | - | chr8_4:7382595-7382614 | Msa1310770:intron | 20.0% |
!!! | TGAAATGTTTTCTTTATAAG+TGG | - | chr8_4:7382622-7382641 | Msa1310770:intron | 20.0% |
!!! | TTTCAATATTTCAGGTTATT+AGG | + | chr8_4:7382806-7382825 | None:intergenic | 20.0% |
!! | TAACTAGATTTCAATATTTC+AGG | + | chr8_4:7382814-7382833 | None:intergenic | 20.0% |
!! | AAACTACATTTCAATATTTC+AGG | + | chr8_4:7383768-7383787 | None:intergenic | 20.0% |
!! | TTGAAATGTAGTTTATATAC+AGG | - | chr8_4:7383774-7383793 | Msa1310770:intron | 20.0% |
!! | TTTATTAATGGCTCAATTTA+TGG | + | chr8_4:7383833-7383852 | None:intergenic | 20.0% |
!!! | TTAGTAAGGGTATTTATTAA+TGG | + | chr8_4:7383845-7383864 | None:intergenic | 20.0% |
!! | GAAATGAAATATTGGAATAA+TGG | + | chr8_4:7383903-7383922 | None:intergenic | 20.0% |
!! | AAAACATGGAAATGAAATAT+TGG | + | chr8_4:7383911-7383930 | None:intergenic | 20.0% |
!! | ACTCATATAGTTCAATATAA+AGG | + | chr8_4:7384307-7384326 | None:intergenic | 20.0% |
!!! | TTATATGTTTTAACCGTTAA+AGG | - | chr8_4:7384414-7384433 | Msa1310770:intron | 20.0% |
!!! | TGAAAATTTGTATGGATTAA+TGG | - | chr8_4:7384602-7384621 | Msa1310770:intron | 20.0% |
!!! | GTTCCTCAAATTTTATTTTT+TGG | - | chr8_4:7384627-7384646 | Msa1310770:intron | 20.0% |
!!! | CTCAAATTTTATTTTTTGGT+GGG | - | chr8_4:7384631-7384650 | Msa1310770:intron | 20.0% |
!! | AATCGATTTATGAGTTTCTT+CGG | + | chr8_4:7379023-7379042 | None:intergenic | 25.0% |
! | TACCAAGCATTTCAAAAATT+AGG | - | chr8_4:7379053-7379072 | Msa1310770:three_prime_UTR | 25.0% |
! | ACCAAGCATTTCAAAAATTA+GGG | - | chr8_4:7379054-7379073 | Msa1310770:three_prime_UTR | 25.0% |
! | TGAATCGATAATTAGAAGAA+AGG | + | chr8_4:7379105-7379124 | None:intergenic | 25.0% |
! | TTTGATATAACATTCCATAG+TGG | - | chr8_4:7379515-7379534 | Msa1310770:intron | 25.0% |
! | TTGATATAACATTCCATAGT+GGG | - | chr8_4:7379516-7379535 | Msa1310770:intron | 25.0% |
! | AAACAAGCATAACAACAATA+AGG | + | chr8_4:7379788-7379807 | None:intergenic | 25.0% |
!! | TATTGTTGTTATGCTTGTTT+AGG | - | chr8_4:7379788-7379807 | Msa1310770:intron | 25.0% |
!!! | TGAGAATGATGTTTCTTTTT+TGG | - | chr8_4:7379997-7380016 | Msa1310770:intron | 25.0% |
!! | TTTTTATTGATGGGATTTTG+AGG | + | chr8_4:7380254-7380273 | None:intergenic | 25.0% |
! | TACATAATAAATTGCAAGCA+CGG | + | chr8_4:7380380-7380399 | None:intergenic | 25.0% |
! | AAAATAGATATTCATCAAGG+GGG | + | chr8_4:7380405-7380424 | None:intergenic | 25.0% |
! | TTAATCACGTTATGTAAAAG+AGG | + | chr8_4:7380544-7380563 | None:intergenic | 25.0% |
! | ACAGTTATAAAAGACACTTA+CGG | + | chr8_4:7380683-7380702 | None:intergenic | 25.0% |
!! | TAAGTGTCTTTTATAACTGT+TGG | - | chr8_4:7380683-7380702 | Msa1310770:intron | 25.0% |
! | ATAATTGATCTGCATAAATG+AGG | + | chr8_4:7380747-7380766 | None:intergenic | 25.0% |
! | ATCAATTATCCATTTGAGAA+AGG | - | chr8_4:7380758-7380777 | Msa1310770:intron | 25.0% |
! | TTCTATAGTTGAACTAGATT+TGG | - | chr8_4:7381073-7381092 | Msa1310770:intron | 25.0% |
! | TCTATAGTTGAACTAGATTT+GGG | - | chr8_4:7381074-7381093 | Msa1310770:intron | 25.0% |
!! | ATTTTATGCATAATCGGTAA+GGG | - | chr8_4:7381240-7381259 | Msa1310770:intron | 25.0% |
! | GCATATAAAATAGCATAAGT+AGG | - | chr8_4:7381330-7381349 | Msa1310770:intron | 25.0% |
! | AATGCCAAAATAGATGAAAA+TGG | - | chr8_4:7381361-7381380 | Msa1310770:intron | 25.0% |
!! | ACTTCCATTTTCATCTATTT+TGG | + | chr8_4:7381368-7381387 | None:intergenic | 25.0% |
! | AAATAGATGAAAATGGAAGT+AGG | - | chr8_4:7381368-7381387 | Msa1310770:intron | 25.0% |
!! | ATTACACAGAAATACGATTT+TGG | - | chr8_4:7381875-7381894 | Msa1310770:intron | 25.0% |
!! | TTACACAGAAATACGATTTT+GGG | - | chr8_4:7381876-7381895 | Msa1310770:intron | 25.0% |
!!! | CATAGCAGTTTGTTTTAATA+TGG | - | chr8_4:7381985-7382004 | Msa1310770:intron | 25.0% |
! | TATGGATAAACAATGCTATT+AGG | - | chr8_4:7382098-7382117 | Msa1310770:intron | 25.0% |
! | ACAATTCAGTCTCAAAATAT+AGG | - | chr8_4:7382137-7382156 | Msa1310770:intron | 25.0% |
! | TAACTAGATTTCAATGATTC+AGG | + | chr8_4:7382195-7382214 | None:intergenic | 25.0% |
!!! | TTTTTTTTTTGAGAGGATAC+AGG | + | chr8_4:7382328-7382347 | None:intergenic | 25.0% |
! | ACAAGACATAAACCTTTATT+AGG | - | chr8_4:7382421-7382440 | Msa1310770:intron | 25.0% |
! | ACATTCCAAAAACCTAATAA+AGG | + | chr8_4:7382436-7382455 | None:intergenic | 25.0% |
! | AACTGCTATTATAACTGTAT+AGG | + | chr8_4:7382585-7382604 | None:intergenic | 25.0% |
! | ACAATTCAGTCTCAAAATAT+AGG | - | chr8_4:7382137-7382156 | Msa1310770:intron | 25.0% |
! | AGAGAGTTTGAATATAAAGT+TGG | + | chr8_4:7382850-7382869 | None:intergenic | 25.0% |
! | AAGTACAAGATATAAACCTT+TGG | - | chr8_4:7382984-7383003 | Msa1310770:intron | 25.0% |
! | AGTACAAGATATAAACCTTT+GGG | - | chr8_4:7382985-7383004 | Msa1310770:intron | 25.0% |
! | GAACTAAAAAATTGTATTGG+AGG | - | chr8_4:7383151-7383170 | Msa1310770:intron | 25.0% |
! | TAAAAAATTGTATTGGAGGA+GGG | - | chr8_4:7383155-7383174 | Msa1310770:intron | 25.0% |
! | AGACAAATTTCTAATTCGTA+GGG | + | chr8_4:7383465-7383484 | None:intergenic | 25.0% |
! | TAGACAAATTTCTAATTCGT+AGG | + | chr8_4:7383466-7383485 | None:intergenic | 25.0% |
!!! | AATAGCAGTTGGTTTTAATA+TGG | - | chr8_4:7383562-7383581 | Msa1310770:intron | 25.0% |
! | ACAATTCAGTCTCAAAATAT+AGG | - | chr8_4:7382137-7382156 | Msa1310770:intron | 25.0% |
! | TGAGAGTTGGAATATAAAAT+TGG | + | chr8_4:7383805-7383824 | None:intergenic | 25.0% |
! | ATTTATGGTAAATTGAGAGT+TGG | + | chr8_4:7383818-7383837 | None:intergenic | 25.0% |
! | ATAAAGCAATTATGAAGAAG+TGG | + | chr8_4:7383938-7383957 | None:intergenic | 25.0% |
! | CTGATCACGAAAAAATTATT+TGG | + | chr8_4:7384011-7384030 | None:intergenic | 25.0% |
! | TCTGTAGAAAATTCAAAGTT+TGG | + | chr8_4:7384260-7384279 | None:intergenic | 25.0% |
!! | GCACTGATAAATAAAATGAT+CGG | - | chr8_4:7384569-7384588 | Msa1310770:intron | 25.0% |
! | TAAATAAAATGATCGGTGAA+TGG | - | chr8_4:7384576-7384595 | Msa1310770:intron | 25.0% |
!! | AATGGTCTTGAAAATTTGTA+TGG | - | chr8_4:7384594-7384613 | Msa1310770:intron | 25.0% |
! | CCACCAAAAAATAAAATTTG+AGG | + | chr8_4:7384633-7384652 | None:intergenic | 25.0% |
!!! | CCTCAAATTTTATTTTTTGG+TGG | - | chr8_4:7384630-7384649 | Msa1310770:intron | 25.0% |
! | ATCGATTTATGAGTTTCTTC+GGG | + | chr8_4:7379022-7379041 | None:intergenic | 30.0% |
!!! | ACCCTAATTTTTGAAATGCT+TGG | + | chr8_4:7379058-7379077 | None:intergenic | 30.0% |
!! | TTTCTCCATTTTTGCAGAAA+TGG | - | chr8_4:7379146-7379165 | Msa1310770:three_prime_UTR | 30.0% |
CATAGATGATGATATTGCTT+TGG | - | chr8_4:7379263-7379282 | Msa1310770:intron | 30.0% | |
TAGAAATGATGGTAGAAACT+CGG | - | chr8_4:7379369-7379388 | Msa1310770:intron | 30.0% | |
CGATCTAGAGATTAATGATT+TGG | - | chr8_4:7379478-7379497 | Msa1310770:CDS | 30.0% | |
AGGTTCTTGTAAATACATAG+AGG | - | chr8_4:7379719-7379738 | Msa1310770:intron | 30.0% | |
!! | TACATAGAGGTTTTGTGTAT+AGG | - | chr8_4:7379732-7379751 | Msa1310770:intron | 30.0% |
TGTAAATGCTGTGAATGATT+TGG | + | chr8_4:7379976-7379995 | None:intergenic | 30.0% | |
AGCTACCAAGAATATGATAA+TGG | - | chr8_4:7380044-7380063 | Msa1310770:intron | 30.0% | |
GCTACCAAGAATATGATAAT+GGG | - | chr8_4:7380045-7380064 | Msa1310770:intron | 30.0% | |
! | CTACCAAGAATATGATAATG+GGG | - | chr8_4:7380046-7380065 | Msa1310770:intron | 30.0% |
!! | TACCAAGAATATGATAATGG+GGG | - | chr8_4:7380047-7380066 | Msa1310770:intron | 30.0% |
CTAAACTAACTGAAATGTCT+AGG | + | chr8_4:7380110-7380129 | None:intergenic | 30.0% | |
ACATCTAATTAATTGAGTCG+AGG | - | chr8_4:7380274-7380293 | Msa1310770:intron | 30.0% | |
CATCTAATTAATTGAGTCGA+GGG | - | chr8_4:7380275-7380294 | Msa1310770:intron | 30.0% | |
ACATAATAAATTGCAAGCAC+GGG | + | chr8_4:7380379-7380398 | None:intergenic | 30.0% | |
TTTATATATTCAAACCGCAG+AGG | - | chr8_4:7380428-7380447 | Msa1310770:intron | 30.0% | |
TGGAGTACAGGTATTTATTT+AGG | - | chr8_4:7380492-7380511 | Msa1310770:intron | 30.0% | |
ATAACGTGATTAAATCACTG+TGG | - | chr8_4:7380551-7380570 | Msa1310770:intron | 30.0% | |
TAGAACAAGACATAAAGCTT+TGG | - | chr8_4:7381028-7381047 | Msa1310770:intron | 30.0% | |
TCAAACTCTCTAATTCTTAG+AGG | - | chr8_4:7381161-7381180 | Msa1310770:intron | 30.0% | |
TTCCTATACAGTTGTAATCA+TGG | - | chr8_4:7381203-7381222 | Msa1310770:intron | 30.0% | |
! | GATTTTATGCATAATCGGTA+AGG | - | chr8_4:7381239-7381258 | Msa1310770:intron | 30.0% |
! | TTTTATGCATAATCGGTAAG+GGG | - | chr8_4:7381241-7381260 | Msa1310770:intron | 30.0% |
!!! | ACGGTAAGGTAAGAATTTTT+TGG | - | chr8_4:7381538-7381557 | Msa1310770:intron | 30.0% |
!!! | GGTAAGAATTTTTTGGAAAG+AGG | - | chr8_4:7381545-7381564 | Msa1310770:intron | 30.0% |
!!! | AGGAAATTGGATTTTTTGAG+TGG | + | chr8_4:7381608-7381627 | None:intergenic | 30.0% |
! | TTTCAATGATTCAGGTTATC+AGG | + | chr8_4:7382187-7382206 | None:intergenic | 30.0% |
ATACAAAACAATGAAGCAAC+AGG | + | chr8_4:7382888-7382907 | None:intergenic | 30.0% | |
! | TAACAGATGTAGCTTTTAGT+TGG | - | chr8_4:7382929-7382948 | Msa1310770:intron | 30.0% |
TAATGTAGAAACAAATACGC+AGG | - | chr8_4:7382953-7382972 | Msa1310770:intron | 30.0% | |
TGGAAGAAATAGAGGAAAAT+GGG | - | chr8_4:7383069-7383088 | Msa1310770:CDS | 30.0% | |
GGGGAACTAAAAAATTGTAT+TGG | - | chr8_4:7383148-7383167 | Msa1310770:intron | 30.0% | |
CTAAAAAATTGTATTGGAGG+AGG | - | chr8_4:7383154-7383173 | Msa1310770:intron | 30.0% | |
ATCTGTGACATATCTTTAGT+TGG | - | chr8_4:7383411-7383430 | Msa1310770:intron | 30.0% | |
TATACGACTATAATAGCAGT+TGG | - | chr8_4:7383551-7383570 | Msa1310770:intron | 30.0% | |
TAGGGATAAACAAAGCTATT+AGG | - | chr8_4:7383683-7383702 | Msa1310770:intron | 30.0% | |
GAAGAAGTGGAAATAAAACA+TGG | + | chr8_4:7383925-7383944 | None:intergenic | 30.0% | |
! | TCTAATTTGTCAAATCTTGC+AGG | - | chr8_4:7384156-7384175 | Msa1310770:intron | 30.0% |
AACGATATTATCAGCGATAA+AGG | + | chr8_4:7384522-7384541 | None:intergenic | 30.0% | |
TTTATCGCTGATAATATCGT+TGG | - | chr8_4:7384521-7384540 | Msa1310770:CDS | 30.0% | |
ACATGCCATAAATACAACAA+TGG | + | chr8_4:7384657-7384676 | None:intergenic | 30.0% | |
TTACGTGGCAAAAAATTGAC+CGG | + | chr8_4:7378884-7378903 | None:intergenic | 35.0% | |
TCGATTTATGAGTTTCTTCG+GGG | + | chr8_4:7379021-7379040 | None:intergenic | 35.0% | |
ATAAGAGGAATCTTACAAGC+TGG | + | chr8_4:7379215-7379234 | None:intergenic | 35.0% | |
TCTACCATCATTTCTACGAT+AGG | + | chr8_4:7379365-7379384 | None:intergenic | 35.0% | |
! | TAACATTCCATAGTGGGATA+AGG | - | chr8_4:7379522-7379541 | Msa1310770:intron | 35.0% |
! | ATCGCATGCCATAATTTTGA+GGG | + | chr8_4:7379839-7379858 | None:intergenic | 35.0% |
! | AATCGCATGCCATAATTTTG+AGG | + | chr8_4:7379840-7379859 | None:intergenic | 35.0% |
!! | AAGAATATGATAATGGGGGT+GGG | - | chr8_4:7380051-7380070 | Msa1310770:intron | 35.0% |
GTTTAGCTGTAGAAAATGTC+AGG | - | chr8_4:7380124-7380143 | Msa1310770:intron | 35.0% | |
ACTGTCAATTGACATATCAC+CGG | - | chr8_4:7380337-7380356 | Msa1310770:intron | 35.0% | |
GGGAAAAGTAAATGAAGATC+CGG | + | chr8_4:7380359-7380378 | None:intergenic | 35.0% | |
ACTTGCGAAGGAAATTTCAA+AGG | - | chr8_4:7380467-7380486 | Msa1310770:intron | 35.0% | |
CGAAGGAAATTTCAAAGGAT+TGG | - | chr8_4:7380472-7380491 | Msa1310770:intron | 35.0% | |
ATTTCAAAGGATTGGAGTAC+AGG | - | chr8_4:7380480-7380499 | Msa1310770:intron | 35.0% | |
TTAAATCACTGTGGATGCTT+TGG | - | chr8_4:7380560-7380579 | Msa1310770:intron | 35.0% | |
TTGATGCTACGTTCAAAAAC+TGG | + | chr8_4:7380589-7380608 | None:intergenic | 35.0% | |
! | TGTCTTTTATAACTGTTGGC+TGG | - | chr8_4:7380687-7380706 | Msa1310770:intron | 35.0% |
GTACAAAACATTGAAGCAAC+AGG | + | chr8_4:7380959-7380978 | None:intergenic | 35.0% | |
ATGCTACGAATCAAATATGC+AGG | - | chr8_4:7380996-7381015 | Msa1310770:intron | 35.0% | |
! | ACAAGACATAAAGCTTTGGT+AGG | - | chr8_4:7381032-7381051 | Msa1310770:intron | 35.0% |
GAGAGTTTGACAACCTTATT+TGG | + | chr8_4:7381151-7381170 | None:intergenic | 35.0% | |
TGCCATGATTACAACTGTAT+AGG | + | chr8_4:7381208-7381227 | None:intergenic | 35.0% | |
AGGAATGCCAGAAGAAAATA+TGG | - | chr8_4:7381388-7381407 | Msa1310770:intron | 35.0% | |
AAAATATGGAAGCAGGAGAA+AGG | - | chr8_4:7381402-7381421 | Msa1310770:intron | 35.0% | |
GAAAGGATCTCAGGAAATTA+TGG | - | chr8_4:7381419-7381438 | Msa1310770:intron | 35.0% | |
TCTCAGGAAATTATGGAAGT+AGG | - | chr8_4:7381426-7381445 | Msa1310770:intron | 35.0% | |
CTCAGGAAATTATGGAAGTA+GGG | - | chr8_4:7381427-7381446 | Msa1310770:intron | 35.0% | |
AAAACGAGTTTCAGGGAATT+GGG | + | chr8_4:7381700-7381719 | None:intergenic | 35.0% | |
GGATTAGAAAACGAGTTTCA+GGG | + | chr8_4:7381707-7381726 | None:intergenic | 35.0% | |
! | TGGATTAGAAAACGAGTTTC+AGG | + | chr8_4:7381708-7381727 | None:intergenic | 35.0% |
! | TATGTTCATCCAATCGATTC+TGG | + | chr8_4:7381816-7381835 | None:intergenic | 35.0% |
ACAAACTGCTATGATAACCA+TGG | + | chr8_4:7381978-7381997 | None:intergenic | 35.0% | |
AGCAGATCTAGTTAAGAGTA+TGG | - | chr8_4:7382080-7382099 | Msa1310770:intron | 35.0% | |
GGTTATCAGGACAAATACAT+AGG | + | chr8_4:7382174-7382193 | None:intergenic | 35.0% | |
ATTCTACATTACCCAACTAC+AGG | + | chr8_4:7382376-7382395 | None:intergenic | 35.0% | |
AGACGGATGTCTAATTCTTA+GGG | + | chr8_4:7382493-7382512 | None:intergenic | 35.0% | |
TAGACGGATGTCTAATTCTT+AGG | + | chr8_4:7382494-7382513 | None:intergenic | 35.0% | |
GAGAGTTTGACAACCTTATT+TGG | + | chr8_4:7381151-7381170 | None:intergenic | 35.0% | |
TCACTCTTAGAGGTTGTAAT+TGG | - | chr8_4:7382548-7382567 | Msa1310770:intron | 35.0% | |
AGCAGATCTAGTAAAGAGTA+AGG | - | chr8_4:7382691-7382710 | Msa1310770:intron | 35.0% | |
GCAGATCTAGTAAAGAGTAA+GGG | - | chr8_4:7382692-7382711 | Msa1310770:intron | 35.0% | |
GTGGAAGAAATAGAGGAAAA+TGG | - | chr8_4:7383068-7383087 | Msa1310770:CDS | 35.0% | |
AAGAAATAGAGGAAAATGGG+AGG | - | chr8_4:7383072-7383091 | Msa1310770:CDS | 35.0% | |
AGAAATAGAGGAAAATGGGA+GGG | - | chr8_4:7383073-7383092 | Msa1310770:CDS | 35.0% | |
ATGAGGAGGGTTTAGTATTA+TGG | + | chr8_4:7383125-7383144 | None:intergenic | 35.0% | |
AATACTAAACCCTCCTCATT+TGG | - | chr8_4:7383126-7383145 | Msa1310770:intron | 35.0% | |
ATACTAAACCCTCCTCATTT+GGG | - | chr8_4:7383127-7383146 | Msa1310770:intron | 35.0% | |
!!! | TTTTTTAGTTCCCCCAAATG+AGG | + | chr8_4:7383142-7383161 | None:intergenic | 35.0% |
GTGGAAAATATGAGGGAAAA+TGG | + | chr8_4:7383328-7383347 | None:intergenic | 35.0% | |
ACAGATTCATAAACCTACCA+AGG | + | chr8_4:7383397-7383416 | None:intergenic | 35.0% | |
TATACCAAATACAACCTCCA+AGG | + | chr8_4:7383525-7383544 | None:intergenic | 35.0% | |
AAGCAGATCTTGTAAACAGT+AGG | - | chr8_4:7383664-7383683 | Msa1310770:intron | 35.0% | |
AGCAGATCTTGTAAACAGTA+GGG | - | chr8_4:7383665-7383684 | Msa1310770:intron | 35.0% | |
! | TCAATTGTTATTGCTTGAGC+AGG | + | chr8_4:7384040-7384059 | None:intergenic | 35.0% |
TGCTCAAGCAATAACAATTG+AGG | - | chr8_4:7384039-7384058 | Msa1310770:intron | 35.0% | |
GACAAATTAGAGCACAATTG+AGG | + | chr8_4:7384147-7384166 | None:intergenic | 35.0% | |
AAATCCACAATAGATGCACT+TGG | + | chr8_4:7384198-7384217 | None:intergenic | 35.0% | |
! | CTATTGTGGATTTTGTCAAG+AGG | - | chr8_4:7384205-7384224 | Msa1310770:intron | 35.0% |
! | ATTTTCTACAGAGACTCATG+AGG | - | chr8_4:7384268-7384287 | Msa1310770:intron | 35.0% |
TCGTACAAAAGCTCCTTTAA+CGG | + | chr8_4:7384430-7384449 | None:intergenic | 35.0% | |
AAAGAGAAGCTGCTTGAAAA+TGG | - | chr8_4:7384451-7384470 | Msa1310770:intron | 35.0% | |
TGCTTGAAAATGGTGATAGA+TGG | - | chr8_4:7384461-7384480 | Msa1310770:intron | 35.0% | |
GCTTGAAAATGGTGATAGAT+GGG | - | chr8_4:7384462-7384481 | Msa1310770:intron | 35.0% | |
! | AAACTTGTAGCCTTGAACTT+TGG | - | chr8_4:7384775-7384794 | Msa1310770:five_prime_UTR | 35.0% |
! | TAGCCTTGAACTTTGGATAA+TGG | - | chr8_4:7384782-7384801 | Msa1310770:five_prime_UTR | 35.0% |
GTTCCATTATCCAAAGTTCA+AGG | + | chr8_4:7384788-7384807 | None:intergenic | 35.0% | |
TACGTGGCAAAAAATTGACC+GGG | + | chr8_4:7378883-7378902 | None:intergenic | 40.0% | |
! | TCTGAGATGAAGAGAAGAGA+GGG | + | chr8_4:7378930-7378949 | None:intergenic | 40.0% |
AGATTTCCGAGCTAAGAATG+CGG | + | chr8_4:7379172-7379191 | None:intergenic | 40.0% | |
CGCAAAACTCGTGACATAAT+AGG | - | chr8_4:7379292-7379311 | Msa1310770:intron | 40.0% | |
AGCACCTATCGTAGAAATGA+TGG | - | chr8_4:7379358-7379377 | Msa1310770:intron | 40.0% | |
! | CTCGGTTGTTGTTGTTGTAA+TGG | - | chr8_4:7379545-7379564 | Msa1310770:intron | 40.0% |
TGTTATGCTTGTTTAGGCTG+TGG | - | chr8_4:7379794-7379813 | Msa1310770:intron | 40.0% | |
CTGCACAACCCTCAAAATTA+TGG | - | chr8_4:7379828-7379847 | Msa1310770:intron | 40.0% | |
CACCTCTACTCTACCAAATT+AGG | - | chr8_4:7379867-7379886 | Msa1310770:intron | 40.0% | |
GACCTAATTTGGTAGAGTAG+AGG | + | chr8_4:7379872-7379891 | None:intergenic | 40.0% | |
GAGAAACGACAGACCTAATT+TGG | + | chr8_4:7379883-7379902 | None:intergenic | 40.0% | |
CACCCCCATTATCATATTCT+TGG | + | chr8_4:7380052-7380071 | None:intergenic | 40.0% | |
!! | CAAGAATATGATAATGGGGG+TGG | - | chr8_4:7380050-7380069 | Msa1310770:intron | 40.0% |
! | AAAATGTCAGGAAAGTGCAC+AGG | - | chr8_4:7380136-7380155 | Msa1310770:intron | 40.0% |
TTTCCCCATTACCATGTGAA+TGG | - | chr8_4:7380187-7380206 | Msa1310770:intron | 40.0% | |
! | TGACCATTCACATGGTAATG+GGG | + | chr8_4:7380193-7380212 | None:intergenic | 40.0% |
CTGACCATTCACATGGTAAT+GGG | + | chr8_4:7380194-7380213 | None:intergenic | 40.0% | |
GCAACTTATACTTACGTGCA+TGG | - | chr8_4:7380721-7380740 | Msa1310770:intron | 40.0% | |
TGCTTGCAAACTTTGTGAAG+CGG | - | chr8_4:7380850-7380869 | Msa1310770:intron | 40.0% | |
! | CCTGCTTCCATATTTTCTTC+TGG | + | chr8_4:7381398-7381417 | None:intergenic | 40.0% |
CCAGAAGAAAATATGGAAGC+AGG | - | chr8_4:7381395-7381414 | Msa1310770:intron | 40.0% | |
GAAAGAGAAACGATCAAGAG+AGG | - | chr8_4:7381449-7381468 | Msa1310770:intron | 40.0% | |
CTGTCTCTTCCACTCTTATA+GGG | - | chr8_4:7381489-7381508 | Msa1310770:intron | 40.0% | |
CTTCCACTCTTATAGGGAAA+TGG | - | chr8_4:7381495-7381514 | Msa1310770:intron | 40.0% | |
CAACCATTTCCCTATAAGAG+TGG | + | chr8_4:7381501-7381520 | None:intergenic | 40.0% | |
TCTTATAGGGAAATGGTTGC+AGG | - | chr8_4:7381502-7381521 | Msa1310770:intron | 40.0% | |
CTTATAGGGAAATGGTTGCA+GGG | - | chr8_4:7381503-7381522 | Msa1310770:intron | 40.0% | |
TGCAGTGCACATTAACTATG+CGG | + | chr8_4:7381580-7381599 | None:intergenic | 40.0% | |
GAAAACGAGTTTCAGGGAAT+TGG | + | chr8_4:7381701-7381720 | None:intergenic | 40.0% | |
! | TCTAATCCACTCCTCTGAAA+CGG | - | chr8_4:7381719-7381738 | Msa1310770:intron | 40.0% |
!! | TGGGGATTGGTTTCAATTGT+GGG | + | chr8_4:7381756-7381775 | None:intergenic | 40.0% |
!! | TTGGGGATTGGTTTCAATTG+TGG | + | chr8_4:7381757-7381776 | None:intergenic | 40.0% |
GGTCTACTCATAGTTGTTGA+GGG | - | chr8_4:7381897-7381916 | Msa1310770:intron | 40.0% | |
GTCTACTCATAGTTGTTGAG+GGG | - | chr8_4:7381898-7381917 | Msa1310770:intron | 40.0% | |
ATACACGATTCTGACTACCA+TGG | - | chr8_4:7381958-7381977 | Msa1310770:intron | 40.0% | |
CAACAAAACAATGACGCAAC+AGG | + | chr8_4:7382269-7382288 | None:intergenic | 40.0% | |
AACAAACCTTAGCCTGTAGT+TGG | - | chr8_4:7382361-7382380 | Msa1310770:intron | 40.0% | |
ACAAACCTTAGCCTGTAGTT+GGG | - | chr8_4:7382362-7382381 | Msa1310770:intron | 40.0% | |
TCAAACTCTCTCACTCTTAG+AGG | - | chr8_4:7382538-7382557 | Msa1310770:intron | 40.0% | |
ATCTGCTTGTTTGTCCTATG+TGG | + | chr8_4:7382678-7382697 | None:intergenic | 40.0% | |
CAGTCTCAAAATATAGGCTG+TGG | - | chr8_4:7382143-7382162 | Msa1310770:intron | 40.0% | |
ATGAAGCAACAGGAAAATGC+TGG | + | chr8_4:7382878-7382897 | None:intergenic | 40.0% | |
GGAAAAAAGGAATGAGCAAG+TGG | - | chr8_4:7383049-7383068 | Msa1310770:CDS | 40.0% | |
TGAGCAAGTGGAAGAAATAG+AGG | - | chr8_4:7383061-7383080 | Msa1310770:CDS | 40.0% | |
GAAATAGAGGAAAATGGGAG+GGG | - | chr8_4:7383074-7383093 | Msa1310770:CDS | 40.0% | |
TACTAAACCCTCCTCATTTG+GGG | - | chr8_4:7383128-7383147 | Msa1310770:intron | 40.0% | |
TTGAGGGGTGGAAAATATGA+GGG | + | chr8_4:7383335-7383354 | None:intergenic | 40.0% | |
TTTGAGGGGTGGAAAATATG+AGG | + | chr8_4:7383336-7383355 | None:intergenic | 40.0% | |
TCTTTAGTTGGACCAGACAT+AGG | - | chr8_4:7383423-7383442 | Msa1310770:intron | 40.0% | |
!! | AGAGTCTGACAGCCTTATTT+GGG | + | chr8_4:7383499-7383518 | None:intergenic | 40.0% |
TCATCCTTGGAGGTTGTATT+TGG | - | chr8_4:7383518-7383537 | Msa1310770:intron | 40.0% | |
ATCTGCTTGTTTGTCCTATG+TGG | + | chr8_4:7382678-7382697 | None:intergenic | 40.0% | |
CAGCAGATGATTCTACTGAA+AGG | + | chr8_4:7383971-7383990 | None:intergenic | 40.0% | |
AGCAATAACAATTGAGGCTG+AGG | - | chr8_4:7384045-7384064 | Msa1310770:intron | 40.0% | |
ATGACCAAGTGCATCTATTG+TGG | - | chr8_4:7384191-7384210 | Msa1310770:intron | 40.0% | |
CTTCAACAATGGCATCAACT+GGG | + | chr8_4:7384235-7384254 | None:intergenic | 40.0% | |
! | CAGTTGATGCCATTGTTGAA+GGG | - | chr8_4:7384234-7384253 | Msa1310770:intron | 40.0% |
AAAGTTTGGCCCTTCAACAA+TGG | + | chr8_4:7384246-7384265 | None:intergenic | 40.0% | |
GATAAAGGCTTTCAGATCTC+AGG | + | chr8_4:7384507-7384526 | None:intergenic | 40.0% | |
TCGTTGGATCTCTGCTTATT+CGG | - | chr8_4:7384537-7384556 | Msa1310770:intron | 40.0% | |
GTGGGCCATTGTTGTATTTA+TGG | - | chr8_4:7384649-7384668 | Msa1310770:intron | 40.0% | |
CTGAGATGAAGAGAAGAGAG+GGG | + | chr8_4:7378929-7378948 | None:intergenic | 45.0% | |
!! | CTCTGAGATGAAGAGAAGAG+AGG | + | chr8_4:7378931-7378950 | None:intergenic | 45.0% |
TCCTCAGATCAACCTTCTTC+AGG | - | chr8_4:7378980-7378999 | Msa1310770:three_prime_UTR | 45.0% | |
! | ACCTGAAGAAGGTTGATCTG+AGG | + | chr8_4:7378984-7379003 | None:intergenic | 45.0% |
GAGAGAGAGATACCTGAAGA+AGG | + | chr8_4:7378995-7379014 | None:intergenic | 45.0% | |
TGCGGCCATTTCTGCAAAAA+TGG | + | chr8_4:7379154-7379173 | None:intergenic | 45.0% | |
AAATGGCCGCATTCTTAGCT+CGG | - | chr8_4:7379163-7379182 | Msa1310770:exon | 45.0% | |
AGAGGAATCTTACAAGCTGG+CGG | + | chr8_4:7379212-7379231 | None:intergenic | 45.0% | |
TGATGGTAGAAACTCGGCTT+AGG | - | chr8_4:7379375-7379394 | Msa1310770:intron | 45.0% | |
AAACTCGGCTTAGGTGGTTT+GGG | - | chr8_4:7379384-7379403 | Msa1310770:intron | 45.0% | |
! | ACCGGTGGATTCTGTAGTAA+GGG | - | chr8_4:7379421-7379440 | Msa1310770:CDS | 45.0% |
! | TTCCATAGTGGGATAAGGCT+CGG | - | chr8_4:7379527-7379546 | Msa1310770:intron | 45.0% |
!! | TATGATAATGGGGGTGGGTT+TGG | - | chr8_4:7380056-7380075 | Msa1310770:intron | 45.0% |
AAAGTGAGTGGAGCACATTG+TGG | + | chr8_4:7380170-7380189 | None:intergenic | 45.0% | |
!! | ATGGTAATGGGGAAAGTGAG+TGG | + | chr8_4:7380182-7380201 | None:intergenic | 45.0% |
GCTGACCATTCACATGGTAA+TGG | + | chr8_4:7380195-7380214 | None:intergenic | 45.0% | |
TTACCATGTGAATGGTCAGC+CGG | - | chr8_4:7380195-7380214 | Msa1310770:intron | 45.0% | |
AGAAAGGGAGAAACTTGCGA+AGG | - | chr8_4:7380455-7380474 | Msa1310770:intron | 45.0% | |
CATTAGACCTCGAACAAGCT+CGG | + | chr8_4:7380626-7380645 | None:intergenic | 45.0% | |
CTCAATGGGCCTTTCTCAAA+TGG | + | chr8_4:7380770-7380789 | None:intergenic | 45.0% | |
GCACTCAGAAGATATCCAAC+AGG | - | chr8_4:7380812-7380831 | Msa1310770:intron | 45.0% | |
CAGAAGATATCCAACAGGAG+AGG | - | chr8_4:7380817-7380836 | Msa1310770:intron | 45.0% | |
AGAGCACAGATGCTACCAAA+TGG | - | chr8_4:7380922-7380941 | Msa1310770:intron | 45.0% | |
! | CAGGAAAATGCTGTGCCATT+TGG | + | chr8_4:7380940-7380959 | None:intergenic | 45.0% |
! | AACGATCAAGAGAGGTGTAG+TGG | - | chr8_4:7381457-7381476 | Msa1310770:intron | 45.0% |
CCTATAAGAGTGGAAGAGAC+AGG | + | chr8_4:7381491-7381510 | None:intergenic | 45.0% | |
CCTGTCTCTTCCACTCTTAT+AGG | - | chr8_4:7381488-7381507 | Msa1310770:intron | 45.0% | |
TAGTTAATGTGCACTGCACG+TGG | - | chr8_4:7381582-7381601 | Msa1310770:intron | 45.0% | |
GATGACCTGTTTCACGTTGT+GGG | + | chr8_4:7381671-7381690 | None:intergenic | 45.0% | |
AGATGACCTGTTTCACGTTG+TGG | + | chr8_4:7381672-7381691 | None:intergenic | 45.0% | |
!! | CTAATCCACTCCTCTGAAAC+GGG | - | chr8_4:7381720-7381739 | Msa1310770:intron | 45.0% |
TCAAAGAAGACCCGTTTCAG+AGG | + | chr8_4:7381733-7381752 | None:intergenic | 45.0% | |
AAACCAATCCCCAACCTTAG+AGG | - | chr8_4:7381763-7381782 | Msa1310770:intron | 45.0% | |
AACCAATCCCCAACCTTAGA+GGG | - | chr8_4:7381764-7381783 | Msa1310770:intron | 45.0% | |
GGGTCTACTCATAGTTGTTG+AGG | - | chr8_4:7381896-7381915 | Msa1310770:intron | 45.0% | |
CTAGAGGGATAACATTGCAG+CGG | + | chr8_4:7382039-7382058 | None:intergenic | 45.0% | |
TCCTACGTTGCTACACTAGA+GGG | + | chr8_4:7382054-7382073 | None:intergenic | 45.0% | |
TGCTATTAGGTGTGTCTCTC+TGG | - | chr8_4:7382111-7382130 | Msa1310770:intron | 45.0% | |
CATTACCCAACTACAGGCTA+AGG | + | chr8_4:7382370-7382389 | None:intergenic | 45.0% | |
AACTCGCAAACAAAGCCCAA+AGG | + | chr8_4:7383003-7383022 | None:intergenic | 45.0% | |
!! | TTGGGCTTTGTTTGCGAGTT+TGG | - | chr8_4:7383003-7383022 | Msa1310770:intron | 45.0% |
ACTAAACCCTCCTCATTTGG+GGG | - | chr8_4:7383129-7383148 | Msa1310770:intron | 45.0% | |
TTAGTTCCCCCAAATGAGGA+GGG | + | chr8_4:7383138-7383157 | None:intergenic | 45.0% | |
! | TTTAGTTCCCCCAAATGAGG+AGG | + | chr8_4:7383139-7383158 | None:intergenic | 45.0% |
! | TGTATTGGAGGAGGGTTTTG+AGG | - | chr8_4:7383163-7383182 | Msa1310770:intron | 45.0% |
!! | GTATTGGAGGAGGGTTTTGA+GGG | - | chr8_4:7383164-7383183 | Msa1310770:intron | 45.0% |
!!! | TATTGGAGGAGGGTTTTGAG+GGG | - | chr8_4:7383165-7383184 | Msa1310770:intron | 45.0% |
! | CTTTGTTTGCGAGTTTGGAG+CGG | + | chr8_4:7383008-7383027 | None:intergenic | 45.0% |
!! | CAAGGCTTTGTTTGCGAGTT+TGG | + | chr8_4:7383379-7383398 | None:intergenic | 45.0% |
CAAACTCGCAAACAAAGCCT+TGG | - | chr8_4:7383377-7383396 | Msa1310770:intron | 45.0% | |
CTCGCAAAGTTTCCTATGTC+TGG | + | chr8_4:7383438-7383457 | None:intergenic | 45.0% | |
!! | GAGAGTCTGACAGCCTTATT+TGG | + | chr8_4:7383500-7383519 | None:intergenic | 45.0% |
ACGGATGGATAATGTTGCAG+TGG | + | chr8_4:7383617-7383636 | None:intergenic | 45.0% | |
! | TATGTGGCTACTGGCTACAA+CGG | + | chr8_4:7383636-7383655 | None:intergenic | 45.0% |
TGTTTGTCCTATGTGGCTAC+TGG | + | chr8_4:7382671-7382690 | None:intergenic | 45.0% | |
TTACTGACCGAGTTGTCCTA+CGG | + | chr8_4:7384087-7384106 | None:intergenic | 45.0% | |
GAAGGGAAGACACAAAAGGT+AGG | + | chr8_4:7384110-7384129 | None:intergenic | 45.0% | |
AGGAGAAGGGAAGACACAAA+AGG | + | chr8_4:7384114-7384133 | None:intergenic | 45.0% | |
ACAATTGAGGAATGCAGGGA+AGG | + | chr8_4:7384134-7384153 | None:intergenic | 45.0% | |
GAGCACAATTGAGGAATGCA+GGG | + | chr8_4:7384138-7384157 | None:intergenic | 45.0% | |
AGAGCACAATTGAGGAATGC+AGG | + | chr8_4:7384139-7384158 | None:intergenic | 45.0% | |
CCTTCAACAATGGCATCAAC+TGG | + | chr8_4:7384236-7384255 | None:intergenic | 45.0% | |
! | CCAGTTGATGCCATTGTTGA+AGG | - | chr8_4:7384233-7384252 | Msa1310770:intron | 45.0% |
CAAGCGCACAATGTGTTACG+TGG | + | chr8_4:7378899-7378918 | None:intergenic | 50.0% | |
TCGTTTCGTGTTCCTCTCTG+TGG | - | chr8_4:7378953-7378972 | Msa1310770:three_prime_UTR | 50.0% | |
TCTGAGGAGAATCCACAGAG+AGG | + | chr8_4:7378968-7378987 | None:intergenic | 50.0% | |
GAGGAATCTTACAAGCTGGC+GGG | + | chr8_4:7379211-7379230 | None:intergenic | 50.0% | |
AGAGAGAGACAGAGAGAGTC+AGG | - | chr8_4:7379333-7379352 | Msa1310770:intron | 50.0% | |
GAGAGAGACAGAGAGAGTCA+GGG | - | chr8_4:7379334-7379353 | Msa1310770:intron | 50.0% | |
TGGTAGAAACTCGGCTTAGG+TGG | - | chr8_4:7379378-7379397 | Msa1310770:intron | 50.0% | |
GAAACTCGGCTTAGGTGGTT+TGG | - | chr8_4:7379383-7379402 | Msa1310770:intron | 50.0% | |
TGGGCATGTAGAGAGAAGAC+CGG | - | chr8_4:7379403-7379422 | Msa1310770:intron | 50.0% | |
! | GACCGGTGGATTCTGTAGTA+AGG | - | chr8_4:7379420-7379439 | Msa1310770:CDS | 50.0% |
CCCCTTACTACAGAATCCAC+CGG | + | chr8_4:7379425-7379444 | None:intergenic | 50.0% | |
! | CCGGTGGATTCTGTAGTAAG+GGG | - | chr8_4:7379422-7379441 | Msa1310770:CDS | 50.0% |
GTGGATTCTGTAGTAAGGGG+AGG | - | chr8_4:7379425-7379444 | Msa1310770:CDS | 50.0% | |
! | AACCGAGCCTTATCCCACTA+TGG | + | chr8_4:7379532-7379551 | None:intergenic | 50.0% |
ATGCTTGTTTAGGCTGTGGC+AGG | - | chr8_4:7379798-7379817 | Msa1310770:intron | 50.0% | |
TTTAGGCTGTGGCAGGTCAA+GGG | - | chr8_4:7379805-7379824 | Msa1310770:intron | 50.0% | |
AAGCGGGATACACACAAGTC+CGG | + | chr8_4:7380217-7380236 | None:intergenic | 50.0% | |
!! | GATGGGATTTTGAGGAGCTG+TGG | + | chr8_4:7380246-7380265 | None:intergenic | 50.0% |
AAACCGCAGAGGACGAAGAA+AGG | - | chr8_4:7380439-7380458 | Msa1310770:intron | 50.0% | |
AACCGCAGAGGACGAAGAAA+GGG | - | chr8_4:7380440-7380459 | Msa1310770:intron | 50.0% | |
! | TTTCTCACCGAGCTTGTTCG+AGG | - | chr8_4:7380616-7380635 | Msa1310770:intron | 50.0% |
CACGGAAACGAGGACTCAAT+GGG | + | chr8_4:7380784-7380803 | None:intergenic | 50.0% | |
CATTGAGTCCTCGTTTCCGT+GGG | - | chr8_4:7380783-7380802 | Msa1310770:intron | 50.0% | |
ATTGAGTCCTCGTTTCCGTG+GGG | - | chr8_4:7380784-7380803 | Msa1310770:intron | 50.0% | |
TTCTGAGTGCATGTTCCCCA+CGG | + | chr8_4:7380802-7380821 | None:intergenic | 50.0% | |
ATGCAACGTTCCTCTCCTGT+TGG | + | chr8_4:7380830-7380849 | None:intergenic | 50.0% | |
GAAGCAGGAGAAAGGATCTC+AGG | - | chr8_4:7381410-7381429 | Msa1310770:intron | 50.0% | |
TAGGGAAATGGTTGCAGGGT+AGG | - | chr8_4:7381507-7381526 | Msa1310770:intron | 50.0% | |
AGGGAAATGGTTGCAGGGTA+GGG | - | chr8_4:7381508-7381527 | Msa1310770:intron | 50.0% | |
TGCAGGGTAGGGGAAAGTAA+CGG | - | chr8_4:7381519-7381538 | Msa1310770:intron | 50.0% | |
GGTAGGGGAAAGTAACGGTA+AGG | - | chr8_4:7381524-7381543 | Msa1310770:intron | 50.0% | |
TCTGACCCACAACGTGAAAC+AGG | - | chr8_4:7381663-7381682 | Msa1310770:intron | 50.0% | |
CAACAATGGAACTCGCCACA+GGG | + | chr8_4:7381790-7381809 | None:intergenic | 50.0% | |
TGTGGCGAGTTCCATTGTTG+CGG | - | chr8_4:7381790-7381809 | Msa1310770:intron | 50.0% | |
! | ATCGATTCTGGCCGCAACAA+TGG | + | chr8_4:7381804-7381823 | None:intergenic | 50.0% |
TTGTTGCGGCCAGAATCGAT+TGG | - | chr8_4:7381804-7381823 | Msa1310770:intron | 50.0% | |
TCCCTCTAGTGTAGCAACGT+AGG | - | chr8_4:7382050-7382069 | Msa1310770:intron | 50.0% | |
GTCCTACGTTGCTACACTAG+AGG | + | chr8_4:7382055-7382074 | None:intergenic | 50.0% | |
GCACTGCAACATTATCCCTC+TGG | - | chr8_4:7382647-7382666 | Msa1310770:intron | 50.0% | |
TCCTATGTGGCTACACCAGA+GGG | + | chr8_4:7382665-7382684 | None:intergenic | 50.0% | |
!! | GGCTTTGTTTGCGAGTTTGG+AGG | - | chr8_4:7383006-7383025 | Msa1310770:intron | 50.0% |
AGGGGAAGGCTTGGGAAAAA+AGG | - | chr8_4:7383036-7383055 | Msa1310770:CDS | 50.0% | |
ATAGAGGAAAATGGGAGGGG+AGG | - | chr8_4:7383077-7383096 | Msa1310770:CDS | 50.0% | |
TAGAGGAAAATGGGAGGGGA+GGG | - | chr8_4:7383078-7383097 | Msa1310770:CDS | 50.0% | |
!!! | AGGAGGGTTTTGAGGGGTTT+TGG | - | chr8_4:7383171-7383190 | Msa1310770:intron | 50.0% |
!!! | AGGGTTTTGAGGGGTTTTGG+AGG | - | chr8_4:7383174-7383193 | Msa1310770:intron | 50.0% |
!!! | GGGTTTTGAGGGGTTTTGGA+GGG | - | chr8_4:7383175-7383194 | Msa1310770:intron | 50.0% |
AGGGGAAGGGAAGACTTTGA+GGG | + | chr8_4:7383351-7383370 | None:intergenic | 50.0% | |
CTCGCAAACAAAGCCTTGGT+AGG | - | chr8_4:7383381-7383400 | Msa1310770:intron | 50.0% | |
TGTCAGACTCTCATCCTTGG+AGG | - | chr8_4:7383508-7383527 | Msa1310770:intron | 50.0% | |
GTTGTAGCCAGTAGCCACAT+AGG | - | chr8_4:7383635-7383654 | Msa1310770:intron | 50.0% | |
AGCTATTAGGCGTGTGTCAC+TGG | - | chr8_4:7383696-7383715 | Msa1310770:intron | 50.0% | |
AGGAATGCAGGGAAGGAGAA+GGG | + | chr8_4:7384127-7384146 | None:intergenic | 50.0% | |
GCATGTAGAGAGAAGACCGG+TGG | - | chr8_4:7379406-7379425 | Msa1310770:intron | 55.0% | |
GTTTAGGCTGTGGCAGGTCA+AGG | - | chr8_4:7379804-7379823 | Msa1310770:intron | 55.0% | |
AGTCCGGCTGACCATTCACA+TGG | + | chr8_4:7380201-7380220 | None:intergenic | 55.0% | |
GGACTTGTGTGTATCCCGCT+TGG | - | chr8_4:7380216-7380235 | Msa1310770:intron | 55.0% | |
AGGAGCTGTGGTGAACCAAG+CGG | + | chr8_4:7380234-7380253 | None:intergenic | 55.0% | |
CTCCCTTTCTTCGTCCTCTG+CGG | + | chr8_4:7380445-7380464 | None:intergenic | 55.0% | |
CCACGGAAACGAGGACTCAA+TGG | + | chr8_4:7380785-7380804 | None:intergenic | 55.0% | |
CCATTGAGTCCTCGTTTCCG+TGG | - | chr8_4:7380782-7380801 | Msa1310770:intron | 55.0% | |
GGGAAATGGTTGCAGGGTAG+GGG | - | chr8_4:7381509-7381528 | Msa1310770:intron | 55.0% | |
GAAGACCCGTTTCAGAGGAG+TGG | + | chr8_4:7381728-7381747 | None:intergenic | 55.0% | |
GCAACAATGGAACTCGCCAC+AGG | + | chr8_4:7381791-7381810 | None:intergenic | 55.0% | |
TCCCTCTGGTGTAGCCACAT+AGG | - | chr8_4:7382661-7382680 | Msa1310770:intron | 55.0% | |
GTCCTATGTGGCTACACCAG+AGG | + | chr8_4:7382666-7382685 | None:intergenic | 55.0% | |
CGAGTTTGGAGGCGAAGAGA+GGG | - | chr8_4:7383017-7383036 | Msa1310770:intron | 55.0% | |
GAGTTTGGAGGCGAAGAGAG+GGG | - | chr8_4:7383018-7383037 | Msa1310770:intron | 55.0% | |
AAAATGGGAGGGGAGGGCTT+TGG | - | chr8_4:7383084-7383103 | Msa1310770:CDS | 55.0% | |
AAATGGGAGGGGAGGGCTTT+GGG | - | chr8_4:7383085-7383104 | Msa1310770:CDS | 55.0% | |
! | GAAGGGAAGACTTTGAGGGG+TGG | + | chr8_4:7383347-7383366 | None:intergenic | 55.0% |
GGGGAAGGGAAGACTTTGAG+GGG | + | chr8_4:7383350-7383369 | None:intergenic | 55.0% | |
GAGGGGAAGGGAAGACTTTG+AGG | + | chr8_4:7383352-7383371 | None:intergenic | 55.0% | |
! | TTTGCGAGTTTGGAGCGGAG+GGG | + | chr8_4:7383369-7383388 | None:intergenic | 55.0% |
! | GTTTGCGAGTTTGGAGCGGA+GGG | + | chr8_4:7383370-7383389 | None:intergenic | 55.0% |
! | TGTTTGCGAGTTTGGAGCGG+AGG | + | chr8_4:7383371-7383390 | None:intergenic | 55.0% |
GGCTGTCAGACTCTCATCCT+TGG | - | chr8_4:7383505-7383524 | Msa1310770:intron | 55.0% | |
! | TGGCTACTGGCTACAACGGA+TGG | + | chr8_4:7383632-7383651 | None:intergenic | 55.0% |
ATGGCAGCCGTAGGACAACT+CGG | - | chr8_4:7384077-7384096 | Msa1310770:intron | 55.0% | |
GAGGAATGCAGGGAAGGAGA+AGG | + | chr8_4:7384128-7384147 | None:intergenic | 55.0% | |
GGAGCTGTGGTGAACCAAGC+GGG | + | chr8_4:7380233-7380252 | None:intergenic | 60.0% | |
GCATGTTCCCCACGGAAACG+AGG | + | chr8_4:7380794-7380813 | None:intergenic | 60.0% | |
!! | GGCCCTCTAAGGTTGGGGAT+TGG | + | chr8_4:7381769-7381788 | None:intergenic | 60.0% |
!! | CACAGGGCCCTCTAAGGTTG+GGG | + | chr8_4:7381774-7381793 | None:intergenic | 60.0% |
!! | CCACAGGGCCCTCTAAGGTT+GGG | + | chr8_4:7381775-7381794 | None:intergenic | 60.0% |
GCGAGTTTGGAGGCGAAGAG+AGG | - | chr8_4:7383016-7383035 | Msa1310770:intron | 60.0% | |
TTGGAGGCGAAGAGAGGGGA+AGG | - | chr8_4:7383022-7383041 | Msa1310770:intron | 60.0% | |
GCGAAGAGAGGGGAAGGCTT+GGG | - | chr8_4:7383028-7383047 | Msa1310770:CDS | 60.0% | |
AATGGGAGGGGAGGGCTTTG+GGG | - | chr8_4:7383086-7383105 | Msa1310770:CDS | 60.0% | |
! | GAGTTTGGAGCGGAGGGGAA+GGG | + | chr8_4:7383364-7383383 | None:intergenic | 60.0% |
! | GAGGCTGAGGAGCGTGAAGA+TGG | - | chr8_4:7384058-7384077 | Msa1310770:intron | 60.0% |
AGCGTGAAGATGGCAGCCGT+AGG | - | chr8_4:7384068-7384087 | Msa1310770:intron | 60.0% | |
CCCAACCTTAGAGGGCCCTG+TGG | - | chr8_4:7381772-7381791 | Msa1310770:intron | 65.0% | |
!! | GCCACAGGGCCCTCTAAGGT+TGG | + | chr8_4:7381776-7381795 | None:intergenic | 65.0% |
ACTCGCCACAGGGCCCTCTA+AGG | + | chr8_4:7381780-7381799 | None:intergenic | 65.0% | |
GGCGAAGAGAGGGGAAGGCT+TGG | - | chr8_4:7383027-7383046 | Msa1310770:CDS | 65.0% | |
! | ATGGGAGGGGAGGGCTTTGG+GGG | - | chr8_4:7383087-7383106 | Msa1310770:CDS | 65.0% |
! | CGAGTTTGGAGCGGAGGGGA+AGG | + | chr8_4:7383365-7383384 | None:intergenic | 65.0% |
!! | TGGGAGGGGAGGGCTTTGGG+GGG | - | chr8_4:7383088-7383107 | Msa1310770:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_4 | gene | 7378873 | 7384832 | 7378873 | ID=Msa1310770;Name=Msa1310770 |
chr8_4 | mRNA | 7378873 | 7384832 | 7378873 | ID=Msa1310770-mRNA-1;Parent=Msa1310770;Name=Msa1310770-mRNA-1;_AED=0.10;_eAED=0.10;_QI=131|0.77|0.9|0.9|0.88|0.8|10|301|234 |
chr8_4 | exon | 7378873 | 7379269 | 7378873 | ID=Msa1310770-mRNA-1:exon:2651;Parent=Msa1310770-mRNA-1 |
chr8_4 | exon | 7379416 | 7379527 | 7379416 | ID=Msa1310770-mRNA-1:exon:2650;Parent=Msa1310770-mRNA-1 |
chr8_4 | exon | 7379607 | 7379674 | 7379607 | ID=Msa1310770-mRNA-1:exon:2649;Parent=Msa1310770-mRNA-1 |
chr8_4 | exon | 7382160 | 7382195 | 7382160 | ID=Msa1310770-mRNA-1:exon:2648;Parent=Msa1310770-mRNA-1 |
chr8_4 | exon | 7382834 | 7382947 | 7382834 | ID=Msa1310770-mRNA-1:exon:2647;Parent=Msa1310770-mRNA-1 |
chr8_4 | exon | 7383024 | 7383115 | 7383024 | ID=Msa1310770-mRNA-1:exon:2646;Parent=Msa1310770-mRNA-1 |
chr8_4 | exon | 7383204 | 7383257 | 7383204 | ID=Msa1310770-mRNA-1:exon:2645;Parent=Msa1310770-mRNA-1 |
chr8_4 | exon | 7383817 | 7383895 | 7383817 | ID=Msa1310770-mRNA-1:exon:2644;Parent=Msa1310770-mRNA-1 |
chr8_4 | exon | 7384487 | 7384542 | 7384487 | ID=Msa1310770-mRNA-1:exon:2643;Parent=Msa1310770-mRNA-1 |
chr8_4 | exon | 7384704 | 7384832 | 7384704 | ID=Msa1310770-mRNA-1:exon:2642;Parent=Msa1310770-mRNA-1 |
chr8_4 | five_prime_UTR | 7384704 | 7384832 | 7384704 | ID=Msa1310770-mRNA-1:five_prime_utr;Parent=Msa1310770-mRNA-1 |
chr8_4 | five_prime_UTR | 7384541 | 7384542 | 7384541 | ID=Msa1310770-mRNA-1:five_prime_utr;Parent=Msa1310770-mRNA-1 |
chr8_4 | CDS | 7384487 | 7384540 | 7384487 | ID=Msa1310770-mRNA-1:cds;Parent=Msa1310770-mRNA-1 |
chr8_4 | CDS | 7383817 | 7383895 | 7383817 | ID=Msa1310770-mRNA-1:cds;Parent=Msa1310770-mRNA-1 |
chr8_4 | CDS | 7383204 | 7383257 | 7383204 | ID=Msa1310770-mRNA-1:cds;Parent=Msa1310770-mRNA-1 |
chr8_4 | CDS | 7383024 | 7383115 | 7383024 | ID=Msa1310770-mRNA-1:cds;Parent=Msa1310770-mRNA-1 |
chr8_4 | CDS | 7382834 | 7382947 | 7382834 | ID=Msa1310770-mRNA-1:cds;Parent=Msa1310770-mRNA-1 |
chr8_4 | CDS | 7382160 | 7382195 | 7382160 | ID=Msa1310770-mRNA-1:cds;Parent=Msa1310770-mRNA-1 |
chr8_4 | CDS | 7379607 | 7379674 | 7379607 | ID=Msa1310770-mRNA-1:cds;Parent=Msa1310770-mRNA-1 |
chr8_4 | CDS | 7379416 | 7379527 | 7379416 | ID=Msa1310770-mRNA-1:cds;Parent=Msa1310770-mRNA-1 |
chr8_4 | CDS | 7379174 | 7379269 | 7379174 | ID=Msa1310770-mRNA-1:cds;Parent=Msa1310770-mRNA-1 |
chr8_4 | three_prime_UTR | 7378873 | 7379173 | 7378873 | ID=Msa1310770-mRNA-1:three_prime_utr;Parent=Msa1310770-mRNA-1 |
Gene Sequence |
Protein sequence |