Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0025560 | sp|Q8L817|ATCA7_ARATH | 52.459 | 244 | 111 | 3 | 31 | 273 | 33 | 272 | 3.21e-88 | 267 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004900 | Msa0025560 | 0.800755 | 1.241711e-48 | -8.615850e-47 |
| Msa0005560 | Msa0025560 | 0.804403 | 2.196723e-49 | -8.615850e-47 |
| Msa0011010 | Msa0025560 | 0.814772 | 1.299564e-51 | -8.615850e-47 |
| Msa0011040 | Msa0025560 | 0.803993 | 2.674136e-49 | -8.615850e-47 |
| Msa0011870 | Msa0025560 | 0.802363 | 5.812014e-49 | -8.615850e-47 |
| Msa0013270 | Msa0025560 | 0.802840 | 4.634291e-49 | -8.615850e-47 |
| Msa0024650 | Msa0025560 | 0.842022 | 3.331825e-58 | -8.615850e-47 |
| Msa0025560 | Msa0025570 | 0.823119 | 1.643959e-53 | -8.615850e-47 |
| Msa0025560 | Msa0028690 | 0.837566 | 4.821057e-57 | -8.615850e-47 |
| Msa0025560 | Msa0038010 | 0.804047 | 2.605488e-49 | -8.615850e-47 |
| Msa0025560 | Msa0038150 | -0.811459 | 6.928769e-51 | -8.615850e-47 |
| Msa0025560 | Msa0047560 | -0.802824 | 4.671277e-49 | -8.615850e-47 |
| Msa0025560 | Msa0048380 | 0.812627 | 3.854694e-51 | -8.615850e-47 |
| Msa0025560 | Msa0051980 | 0.804722 | 1.884246e-49 | -8.615850e-47 |
| Msa0025560 | Msa0060410 | 0.828128 | 1.067769e-54 | -8.615850e-47 |
| Msa0025560 | Msa0062190 | 0.804241 | 2.374428e-49 | -8.615850e-47 |
| Msa0025560 | Msa0072180 | 0.863704 | 2.058419e-64 | -8.615850e-47 |
| Msa0025560 | Msa0073110 | 0.834194 | 3.450606e-56 | -8.615850e-47 |
| Msa0025560 | Msa0085710 | 0.806336 | 8.641747e-50 | -8.615850e-47 |
| Msa0025560 | Msa0097010 | 0.806117 | 9.611547e-50 | -8.615850e-47 |
| Msa0025560 | Msa0098380 | 0.820973 | 5.166925e-53 | -8.615850e-47 |
| Msa0025560 | Msa0106540 | 0.806207 | 9.203587e-50 | -8.615850e-47 |
| Msa0025560 | Msa0111780 | 0.803065 | 4.164755e-49 | -8.615850e-47 |
| Msa0025560 | Msa0120450 | 0.826673 | 2.384144e-54 | -8.615850e-47 |
| Msa0025560 | Msa0121300 | 0.973548 | 1.290814e-136 | -8.615850e-47 |
| Msa0025560 | Msa0121320 | 0.816928 | 4.294429e-52 | -8.615850e-47 |
| Msa0025560 | Msa0130360 | 0.812690 | 3.735150e-51 | -8.615850e-47 |
| Msa0025560 | Msa0134780 | 0.801205 | 1.004731e-48 | -8.615850e-47 |
| Msa0025560 | Msa0136000 | 0.800286 | 1.547772e-48 | -8.615850e-47 |
| Msa0025560 | Msa0136090 | 0.802065 | 6.693753e-49 | -8.615850e-47 |
| Msa0025560 | Msa0141410 | 0.802786 | 4.755736e-49 | -8.615850e-47 |
| Msa0025560 | Msa0150000 | 0.814191 | 1.747205e-51 | -8.615850e-47 |
| Msa0025560 | Msa0151660 | 0.800183 | 1.624526e-48 | -8.615850e-47 |
| Msa0025560 | Msa0163690 | 0.843321 | 1.505936e-58 | -8.615850e-47 |
| Msa0025560 | Msa0166190 | 0.948089 | 1.882762e-106 | -8.615850e-47 |
| Msa0025560 | Msa0168750 | 0.822514 | 2.274670e-53 | -8.615850e-47 |
| Msa0025560 | Msa0175060 | 0.809900 | 1.505527e-50 | -8.615850e-47 |
| Msa0025560 | Msa0188560 | 0.804221 | 2.396797e-49 | -8.615850e-47 |
| Msa0025560 | Msa0189990 | 0.817858 | 2.651394e-52 | -8.615850e-47 |
| Msa0025560 | Msa0206370 | 0.825117 | 5.582861e-54 | -8.615850e-47 |
| Msa0025560 | Msa0224870 | 0.835795 | 1.363222e-56 | -8.615850e-47 |
| Msa0025560 | Msa0230920 | 0.829565 | 4.793296e-55 | -8.615850e-47 |
| Msa0025560 | Msa0234150 | 0.808227 | 3.435692e-50 | -8.615850e-47 |
| Msa0025560 | Msa0244310 | 0.820596 | 6.310226e-53 | -8.615850e-47 |
| Msa0025560 | Msa0245660 | 0.812672 | 3.768415e-51 | -8.615850e-47 |
| Msa0025560 | Msa0247780 | 0.819260 | 1.275032e-52 | -8.615850e-47 |
| Msa0025560 | Msa0248320 | 0.810064 | 1.387742e-50 | -8.615850e-47 |
| Msa0025560 | Msa0253230 | -0.808495 | 3.011324e-50 | -8.615850e-47 |
| Msa0025560 | Msa0273400 | 0.819576 | 1.079913e-52 | -8.615850e-47 |
| Msa0025560 | Msa0278920 | 0.803736 | 3.023347e-49 | -8.615850e-47 |
| Msa0025560 | Msa0279810 | 0.800544 | 1.371331e-48 | -8.615850e-47 |
| Msa0025560 | Msa0282830 | 0.827264 | 1.721729e-54 | -8.615850e-47 |
| Msa0025560 | Msa0287480 | 0.816937 | 4.274953e-52 | -8.615850e-47 |
| Msa0025560 | Msa0298000 | 0.813340 | 2.690065e-51 | -8.615850e-47 |
| Msa0025560 | Msa0300470 | 0.808127 | 3.607342e-50 | -8.615850e-47 |
| Msa0025560 | Msa0303900 | 0.814643 | 1.387866e-51 | -8.615850e-47 |
| Msa0025560 | Msa0307630 | 0.815433 | 9.267254e-52 | -8.615850e-47 |
| Msa0025560 | Msa0307740 | 0.807482 | 4.945995e-50 | -8.615850e-47 |
| Msa0025560 | Msa0313660 | 0.801901 | 7.234640e-49 | -8.615850e-47 |
| Msa0025560 | Msa0318490 | 0.821405 | 4.108405e-53 | -8.615850e-47 |
| Msa0025560 | Msa0321240 | 0.829266 | 5.668383e-55 | -8.615850e-47 |
| Msa0025560 | Msa0325260 | 0.812973 | 3.236922e-51 | -8.615850e-47 |
| Msa0025560 | Msa0333770 | 0.830959 | 2.188456e-55 | -8.615850e-47 |
| Msa0025560 | Msa0336460 | 0.815080 | 1.110093e-51 | -8.615850e-47 |
| Msa0025560 | Msa0345050 | 0.819625 | 1.052557e-52 | -8.615850e-47 |
| Msa0025560 | Msa0354600 | 0.831368 | 1.736509e-55 | -8.615850e-47 |
| Msa0025560 | Msa0356240 | 0.806038 | 9.985790e-50 | -8.615850e-47 |
| Msa0025560 | Msa0356270 | 0.840887 | 6.634352e-58 | -8.615850e-47 |
| Msa0025560 | Msa0357310 | 0.809179 | 2.150813e-50 | -8.615850e-47 |
| Msa0025560 | Msa0357470 | 0.828897 | 6.964729e-55 | -8.615850e-47 |
| Msa0025560 | Msa0357510 | 0.829623 | 4.641401e-55 | -8.615850e-47 |
| Msa0025560 | Msa0357530 | 0.827025 | 1.964935e-54 | -8.615850e-47 |
| Msa0025560 | Msa0357550 | 0.800744 | 1.248587e-48 | -8.615850e-47 |
| Msa0025560 | Msa0357560 | 0.810423 | 1.161342e-50 | -8.615850e-47 |
| Msa0025560 | Msa0369990 | 0.807396 | 5.158719e-50 | -8.615850e-47 |
| Msa0025560 | Msa0374470 | 0.809517 | 1.819533e-50 | -8.615850e-47 |
| Msa0025560 | Msa0374600 | 0.806329 | 8.673559e-50 | -8.615850e-47 |
| Msa0025560 | Msa0375790 | 0.810040 | 1.404601e-50 | -8.615850e-47 |
| Msa0025560 | Msa0380110 | 0.807493 | 4.921661e-50 | -8.615850e-47 |
| Msa0025560 | Msa0405200 | 0.809982 | 1.445427e-50 | -8.615850e-47 |
| Msa0025560 | Msa0418230 | 0.864631 | 1.057892e-64 | -8.615850e-47 |
| Msa0025560 | Msa0423630 | 0.812619 | 3.869556e-51 | -8.615850e-47 |
| Msa0025560 | Msa0433090 | 0.813362 | 2.659505e-51 | -8.615850e-47 |
| Msa0025560 | Msa0434910 | 0.804383 | 2.217896e-49 | -8.615850e-47 |
| Msa0025560 | Msa0448230 | 0.833518 | 5.093001e-56 | -8.615850e-47 |
| Msa0025560 | Msa0449500 | 0.830907 | 2.254850e-55 | -8.615850e-47 |
| Msa0025560 | Msa0454770 | 0.813870 | 2.055943e-51 | -8.615850e-47 |
| Msa0025560 | Msa0459930 | 0.823193 | 1.580488e-53 | -8.615850e-47 |
| Msa0025560 | Msa0464620 | 0.852914 | 3.377292e-61 | -8.615850e-47 |
| Msa0025560 | Msa0471130 | -0.802648 | 5.077881e-49 | -8.615850e-47 |
| Msa0025560 | Msa0474660 | -0.806793 | 6.923386e-50 | -8.615850e-47 |
| Msa0025560 | Msa0480900 | -0.820854 | 5.503892e-53 | -8.615850e-47 |
| Msa0025560 | Msa0481670 | 0.810454 | 1.143436e-50 | -8.615850e-47 |
| Msa0025560 | Msa0487110 | 0.801063 | 1.074377e-48 | -8.615850e-47 |
| Msa0025560 | Msa0497680 | 0.812010 | 5.257024e-51 | -8.615850e-47 |
| Msa0025560 | Msa0501080 | 0.810295 | 1.237718e-50 | -8.615850e-47 |
| Msa0025560 | Msa0510050 | 0.823758 | 1.165426e-53 | -8.615850e-47 |
| Msa0025560 | Msa0524710 | 0.822267 | 2.595245e-53 | -8.615850e-47 |
| Msa0025560 | Msa0529110 | 0.803708 | 3.064219e-49 | -8.615850e-47 |
| Msa0025560 | Msa0531040 | 0.809709 | 1.654920e-50 | -8.615850e-47 |
| Msa0025560 | Msa0531050 | 0.824530 | 7.677030e-54 | -8.615850e-47 |
| Msa0025560 | Msa0540640 | 0.837644 | 4.603841e-57 | -8.615850e-47 |
| Msa0025560 | Msa0545680 | 0.808548 | 2.934510e-50 | -8.615850e-47 |
| Msa0025560 | Msa0547370 | 0.837620 | 4.668210e-57 | -8.615850e-47 |
| Msa0025560 | Msa0557240 | 0.815206 | 1.041250e-51 | -8.615850e-47 |
| Msa0025560 | Msa0560060 | 0.809876 | 1.523439e-50 | -8.615850e-47 |
| Msa0025560 | Msa0561830 | 0.812178 | 4.831815e-51 | -8.615850e-47 |
| Msa0025560 | Msa0566280 | 0.824406 | 8.212245e-54 | -8.615850e-47 |
| Msa0025560 | Msa0566490 | 0.821786 | 3.355644e-53 | -8.615850e-47 |
| Msa0025560 | Msa0567330 | 0.848934 | 4.464467e-60 | -8.615850e-47 |
| Msa0025560 | Msa0567570 | 0.854867 | 9.247271e-62 | -8.615850e-47 |
| Msa0025560 | Msa0576320 | 0.841762 | 3.903911e-58 | -8.615850e-47 |
| Msa0025560 | Msa0581350 | 0.808912 | 2.452827e-50 | -8.615850e-47 |
| Msa0025560 | Msa0587930 | 0.818657 | 1.748763e-52 | -8.615850e-47 |
| Msa0025560 | Msa0588040 | 0.814349 | 1.612127e-51 | -8.615850e-47 |
| Msa0025560 | Msa0595270 | 0.802284 | 6.035292e-49 | -8.615850e-47 |
| Msa0025560 | Msa0597800 | 0.834818 | 2.405681e-56 | -8.615850e-47 |
| Msa0025560 | Msa0597820 | 0.824389 | 8.290496e-54 | -8.615850e-47 |
| Msa0025560 | Msa0598310 | 0.813743 | 2.192713e-51 | -8.615850e-47 |
| Msa0025560 | Msa0602100 | 0.816015 | 6.875571e-52 | -8.615850e-47 |
| Msa0025560 | Msa0604280 | 0.815337 | 9.737311e-52 | -8.615850e-47 |
| Msa0025560 | Msa0615070 | 0.803167 | 3.966867e-49 | -8.615850e-47 |
| Msa0025560 | Msa0622890 | 0.805473 | 1.312218e-49 | -8.615850e-47 |
| Msa0025560 | Msa0628200 | 0.821316 | 4.307493e-53 | -8.615850e-47 |
| Msa0025560 | Msa0637590 | 0.815303 | 9.906070e-52 | -8.615850e-47 |
| Msa0025560 | Msa0637700 | 0.822677 | 2.084847e-53 | -8.615850e-47 |
| Msa0025560 | Msa0643230 | 0.850901 | 1.258420e-60 | -8.615850e-47 |
| Msa0025560 | Msa0647300 | 0.806708 | 7.214209e-50 | -8.615850e-47 |
| Msa0025560 | Msa0652590 | 0.808761 | 2.642269e-50 | -8.615850e-47 |
| Msa0025560 | Msa0655370 | 0.807185 | 5.719985e-50 | -8.615850e-47 |
| Msa0025560 | Msa0657710 | 0.856252 | 3.648313e-62 | -8.615850e-47 |
| Msa0025560 | Msa0657720 | 0.822105 | 2.829476e-53 | -8.615850e-47 |
| Msa0025560 | Msa0658150 | 0.839342 | 1.677742e-57 | -8.615850e-47 |
| Msa0025560 | Msa0675630 | 0.813270 | 2.787235e-51 | -8.615850e-47 |
| Msa0025560 | Msa0677130 | 0.823055 | 1.702163e-53 | -8.615850e-47 |
| Msa0025560 | Msa0680460 | 0.825373 | 4.857472e-54 | -8.615850e-47 |
| Msa0025560 | Msa0682110 | 0.810015 | 1.422070e-50 | -8.615850e-47 |
| Msa0025560 | Msa0682160 | 0.807659 | 4.536646e-50 | -8.615850e-47 |
| Msa0025560 | Msa0682910 | 0.821469 | 3.970909e-53 | -8.615850e-47 |
| Msa0025560 | Msa0686830 | 0.812623 | 3.863407e-51 | -8.615850e-47 |
| Msa0025560 | Msa0699170 | 0.807691 | 4.466827e-50 | -8.615850e-47 |
| Msa0025560 | Msa0702790 | 0.821643 | 3.620251e-53 | -8.615850e-47 |
| Msa0025560 | Msa0702800 | 0.853507 | 2.282965e-61 | -8.615850e-47 |
| Msa0025560 | Msa0703000 | 0.841811 | 3.789929e-58 | -8.615850e-47 |
| Msa0025560 | Msa0707330 | 0.820192 | 7.808416e-53 | -8.615850e-47 |
| Msa0025560 | Msa0722890 | 0.804052 | 2.599905e-49 | -8.615850e-47 |
| Msa0025560 | Msa0723090 | 0.810799 | 9.629345e-51 | -8.615850e-47 |
| Msa0025560 | Msa0730890 | 0.805226 | 1.478942e-49 | -8.615850e-47 |
| Msa0025560 | Msa0733560 | 0.808673 | 2.759101e-50 | -8.615850e-47 |
| Msa0025560 | Msa0736920 | 0.811547 | 6.628696e-51 | -8.615850e-47 |
| Msa0025560 | Msa0743370 | 0.812948 | 3.278490e-51 | -8.615850e-47 |
| Msa0025560 | Msa0747710 | 0.804046 | 2.607104e-49 | -8.615850e-47 |
| Msa0025560 | Msa0750790 | 0.812580 | 3.946806e-51 | -8.615850e-47 |
| Msa0025560 | Msa0758990 | 0.819575 | 1.080874e-52 | -8.615850e-47 |
| Msa0025560 | Msa0773030 | 0.856070 | 4.125684e-62 | -8.615850e-47 |
| Msa0025560 | Msa0778570 | 0.808672 | 2.760235e-50 | -8.615850e-47 |
| Msa0025560 | Msa0792410 | 0.815988 | 6.971271e-52 | -8.615850e-47 |
| Msa0025560 | Msa0794100 | 0.800208 | 1.605320e-48 | -8.615850e-47 |
| Msa0025560 | Msa0798840 | 0.801212 | 1.001570e-48 | -8.615850e-47 |
| Msa0025560 | Msa0800120 | 0.839400 | 1.620702e-57 | -8.615850e-47 |
| Msa0025560 | Msa0800150 | 0.827765 | 1.305786e-54 | -8.615850e-47 |
| Msa0025560 | Msa0800180 | 0.805903 | 1.065910e-49 | -8.615850e-47 |
| Msa0025560 | Msa0803880 | 0.807173 | 5.753563e-50 | -8.615850e-47 |
| Msa0025560 | Msa0810330 | 0.816766 | 4.670120e-52 | -8.615850e-47 |
| Msa0025560 | Msa0812720 | 0.830356 | 3.074964e-55 | -8.615850e-47 |
| Msa0025560 | Msa0813610 | 0.805012 | 1.639525e-49 | -8.615850e-47 |
| Msa0025560 | Msa0815940 | 0.806805 | 6.881169e-50 | -8.615850e-47 |
| Msa0025560 | Msa0827340 | -0.808294 | 3.324364e-50 | -8.615850e-47 |
| Msa0025560 | Msa0828950 | 0.821642 | 3.622442e-53 | -8.615850e-47 |
| Msa0025560 | Msa0828960 | 0.850950 | 1.218739e-60 | -8.615850e-47 |
| Msa0025560 | Msa0831310 | 0.822100 | 2.838384e-53 | -8.615850e-47 |
| Msa0025560 | Msa0838120 | -0.801355 | 9.364793e-49 | -8.615850e-47 |
| Msa0025560 | Msa0838210 | 0.835332 | 1.785247e-56 | -8.615850e-47 |
| Msa0025560 | Msa0840540 | 0.808084 | 3.684640e-50 | -8.615850e-47 |
| Msa0025560 | Msa0841930 | 0.804933 | 1.702508e-49 | -8.615850e-47 |
| Msa0025560 | Msa0846870 | 0.805151 | 1.533307e-49 | -8.615850e-47 |
| Msa0025560 | Msa0850640 | 0.832199 | 1.082989e-55 | -8.615850e-47 |
| Msa0025560 | Msa0853080 | 0.803337 | 3.658275e-49 | -8.615850e-47 |
| Msa0025560 | Msa0854230 | 0.821352 | 4.225345e-53 | -8.615850e-47 |
| Msa0025560 | Msa0873880 | 0.811086 | 8.346202e-51 | -8.615850e-47 |
| Msa0025560 | Msa0873910 | 0.820267 | 7.507049e-53 | -8.615850e-47 |
| Msa0025560 | Msa0880850 | 0.809223 | 2.104366e-50 | -8.615850e-47 |
| Msa0025560 | Msa0890210 | 0.817193 | 3.743321e-52 | -8.615850e-47 |
| Msa0025560 | Msa0893220 | 0.800810 | 1.210218e-48 | -8.615850e-47 |
| Msa0025560 | Msa0898970 | 0.827365 | 1.629097e-54 | -8.615850e-47 |
| Msa0025560 | Msa0906660 | 0.827094 | 1.891305e-54 | -8.615850e-47 |
| Msa0025560 | Msa0906680 | 0.802367 | 5.803230e-49 | -8.615850e-47 |
| Msa0025560 | Msa0909260 | 0.839944 | 1.170206e-57 | -8.615850e-47 |
| Msa0025560 | Msa0925940 | 0.804230 | 2.387106e-49 | -8.615850e-47 |
| Msa0025560 | Msa0950090 | 0.803315 | 3.695764e-49 | -8.615850e-47 |
| Msa0025560 | Msa0951200 | 0.807848 | 4.136198e-50 | -8.615850e-47 |
| Msa0025560 | Msa0964510 | 0.808436 | 3.099894e-50 | -8.615850e-47 |
| Msa0025560 | Msa0975950 | 0.814200 | 1.738905e-51 | -8.615850e-47 |
| Msa0025560 | Msa0996990 | 0.801561 | 8.497197e-49 | -8.615850e-47 |
| Msa0025560 | Msa1006030 | 0.820697 | 5.980351e-53 | -8.615850e-47 |
| Msa0025560 | Msa1007900 | 0.847814 | 9.114226e-60 | -8.615850e-47 |
| Msa0025560 | Msa1019420 | 0.855603 | 5.645375e-62 | -8.615850e-47 |
| Msa0025560 | Msa1024480 | 0.819722 | 1.000274e-52 | -8.615850e-47 |
| Msa0025560 | Msa1029820 | 0.831305 | 1.800358e-55 | -8.615850e-47 |
| Msa0025560 | Msa1029860 | 0.826782 | 2.245549e-54 | -8.615850e-47 |
| Msa0025560 | Msa1035050 | 0.806581 | 7.672896e-50 | -8.615850e-47 |
| Msa0025560 | Msa1042300 | 0.819883 | 9.190270e-53 | -8.615850e-47 |
| Msa0025560 | Msa1048390 | 0.805526 | 1.279644e-49 | -8.615850e-47 |
| Msa0025560 | Msa1049380 | 0.822420 | 2.391513e-53 | -8.615850e-47 |
| Msa0025560 | Msa1049400 | 0.810801 | 9.621383e-51 | -8.615850e-47 |
| Msa0025560 | Msa1062060 | 0.843893 | 1.058986e-58 | -8.615850e-47 |
| Msa0025560 | Msa1062290 | 0.844139 | 9.096583e-59 | -8.615850e-47 |
| Msa0025560 | Msa1068730 | 0.817277 | 3.584324e-52 | -8.615850e-47 |
| Msa0025560 | Msa1068940 | 0.822283 | 2.572903e-53 | -8.615850e-47 |
| Msa0025560 | Msa1075090 | 0.802329 | 5.907396e-49 | -8.615850e-47 |
| Msa0025560 | Msa1085820 | 0.808958 | 2.397616e-50 | -8.615850e-47 |
| Msa0025560 | Msa1087200 | 0.806489 | 8.024522e-50 | -8.615850e-47 |
| Msa0025560 | Msa1087210 | 0.814948 | 1.187497e-51 | -8.615850e-47 |
| Msa0025560 | Msa1089990 | 0.815891 | 7.327987e-52 | -8.615850e-47 |
| Msa0025560 | Msa1092310 | 0.808276 | 3.353981e-50 | -8.615850e-47 |
| Msa0025560 | Msa1099650 | 0.801736 | 7.823909e-49 | -8.615850e-47 |
| Msa0025560 | Msa1100330 | 0.813004 | 3.188002e-51 | -8.615850e-47 |
| Msa0025560 | Msa1103450 | 0.807026 | 6.180795e-50 | -8.615850e-47 |
| Msa0025560 | Msa1106030 | 0.825490 | 4.555339e-54 | -8.615850e-47 |
| Msa0025560 | Msa1107220 | 0.830708 | 2.522597e-55 | -8.615850e-47 |
| Msa0025560 | Msa1107520 | 0.834251 | 3.340085e-56 | -8.615850e-47 |
| Msa0025560 | Msa1108560 | 0.828908 | 6.921200e-55 | -8.615850e-47 |
| Msa0025560 | Msa1111910 | 0.822616 | 2.153547e-53 | -8.615850e-47 |
| Msa0025560 | Msa1116090 | 0.804261 | 2.352116e-49 | -8.615850e-47 |
| Msa0025560 | Msa1120960 | 0.804630 | 1.969968e-49 | -8.615850e-47 |
| Msa0025560 | Msa1124220 | 0.810842 | 9.429100e-51 | -8.615850e-47 |
| Msa0025560 | Msa1136630 | 0.828993 | 6.598768e-55 | -8.615850e-47 |
| Msa0025560 | Msa1136690 | 0.850949 | 1.219814e-60 | -8.615850e-47 |
| Msa0025560 | Msa1136760 | 0.832138 | 1.121503e-55 | -8.615850e-47 |
| Msa0025560 | Msa1143260 | 0.802602 | 5.189727e-49 | -8.615850e-47 |
| Msa0025560 | Msa1149910 | 0.826162 | 3.155849e-54 | -8.615850e-47 |
| Msa0025560 | Msa1150760 | 0.825268 | 5.142378e-54 | -8.615850e-47 |
| Msa0025560 | Msa1154060 | 0.812811 | 3.514280e-51 | -8.615850e-47 |
| Msa0025560 | Msa1154320 | 0.823050 | 1.706671e-53 | -8.615850e-47 |
| Msa0025560 | Msa1155610 | 0.804815 | 1.802136e-49 | -8.615850e-47 |
| Msa0025560 | Msa1156710 | 0.817759 | 2.792047e-52 | -8.615850e-47 |
| Msa0025560 | Msa1160540 | 0.831688 | 1.448181e-55 | -8.615850e-47 |
| Msa0025560 | Msa1183870 | 0.831498 | 1.613357e-55 | -8.615850e-47 |
| Msa0025560 | Msa1184680 | 0.800844 | 1.191234e-48 | -8.615850e-47 |
| Msa0025560 | Msa1191270 | 0.822190 | 2.703851e-53 | -8.615850e-47 |
| Msa0025560 | Msa1191530 | -0.800844 | 1.191109e-48 | -8.615850e-47 |
| Msa0025560 | Msa1192360 | 0.808201 | 3.479485e-50 | -8.615850e-47 |
| Msa0025560 | Msa1201760 | 0.808148 | 3.571526e-50 | -8.615850e-47 |
| Msa0025560 | Msa1202800 | 0.858011 | 1.103947e-62 | -8.615850e-47 |
| Msa0025560 | Msa1203650 | 0.821901 | 3.155429e-53 | -8.615850e-47 |
| Msa0025560 | Msa1211940 | 0.832370 | 9.827649e-56 | -8.615850e-47 |
| Msa0025560 | Msa1212080 | 0.827627 | 1.409493e-54 | -8.615850e-47 |
| Msa0025560 | Msa1220720 | 0.816447 | 5.503349e-52 | -8.615850e-47 |
| Msa0025560 | Msa1221270 | 0.814986 | 1.165174e-51 | -8.615850e-47 |
| Msa0025560 | Msa1223710 | 0.827965 | 1.168605e-54 | -8.615850e-47 |
| Msa0025560 | Msa1223960 | 0.815266 | 1.009361e-51 | -8.615850e-47 |
| Msa0025560 | Msa1223990 | 0.818568 | 1.831362e-52 | -8.615850e-47 |
| Msa0025560 | Msa1241960 | 0.805703 | 1.174724e-49 | -8.615850e-47 |
| Msa0025560 | Msa1242130 | 0.806294 | 8.819274e-50 | -8.615850e-47 |
| Msa0025560 | Msa1242160 | 0.840933 | 6.449583e-58 | -8.615850e-47 |
| Msa0025560 | Msa1246830 | 0.823105 | 1.656547e-53 | -8.615850e-47 |
| Msa0025560 | Msa1250610 | 0.802907 | 4.488833e-49 | -8.615850e-47 |
| Msa0025560 | Msa1250660 | 0.807039 | 6.140095e-50 | -8.615850e-47 |
| Msa0025560 | Msa1255210 | 0.844499 | 7.279575e-59 | -8.615850e-47 |
| Msa0025560 | Msa1255710 | 0.801653 | 8.133870e-49 | -8.615850e-47 |
| Msa0025560 | Msa1263110 | 0.827084 | 1.901564e-54 | -8.615850e-47 |
| Msa0025560 | Msa1263370 | 0.805330 | 1.406368e-49 | -8.615850e-47 |
| Msa0025560 | Msa1265570 | 0.827714 | 1.343355e-54 | -8.615850e-47 |
| Msa0025560 | Msa1268360 | 0.845425 | 4.093897e-59 | -8.615850e-47 |
| Msa0025560 | Msa1268390 | 0.824208 | 9.143865e-54 | -8.615850e-47 |
| Msa0025560 | Msa1269200 | 0.823652 | 1.234081e-53 | -8.615850e-47 |
| Msa0025560 | Msa1269500 | 0.830436 | 2.940064e-55 | -8.615850e-47 |
| Msa0025560 | Msa1273320 | 0.857416 | 1.656567e-62 | -8.615850e-47 |
| Msa0025560 | Msa1281780 | 0.803359 | 3.619151e-49 | -8.615850e-47 |
| Msa0025560 | Msa1283070 | 0.811435 | 7.012716e-51 | -8.615850e-47 |
| Msa0025560 | Msa1283930 | 0.844842 | 5.885168e-59 | -8.615850e-47 |
| Msa0025560 | Msa1283980 | 0.800334 | 1.513470e-48 | -8.615850e-47 |
| Msa0025560 | Msa1284020 | 0.837441 | 5.189984e-57 | -8.615850e-47 |
| Msa0025560 | Msa1288070 | 0.812880 | 3.393524e-51 | -8.615850e-47 |
| Msa0025560 | Msa1295650 | 0.846862 | 1.663401e-59 | -8.615850e-47 |
| Msa0025560 | Msa1300570 | 0.809198 | 2.130110e-50 | -8.615850e-47 |
| Msa0025560 | Msa1322500 | 0.806934 | 6.463865e-50 | -8.615850e-47 |
| Msa0025560 | Msa1322960 | 0.845698 | 3.453811e-59 | -8.615850e-47 |
| Msa0025560 | Msa1322980 | 0.803284 | 3.751292e-49 | -8.615850e-47 |
| Msa0025560 | Msa1326640 | 0.812182 | 4.821478e-51 | -8.615850e-47 |
| Msa0025560 | Msa1326680 | 0.806162 | 9.405989e-50 | -8.615850e-47 |
| Msa0025560 | Msa1331570 | -0.802603 | 5.187846e-49 | -8.615850e-47 |
| Msa0025560 | Msa1334670 | 0.826431 | 2.723477e-54 | -8.615850e-47 |
| Msa0025560 | Msa1343600 | 0.814048 | 1.878573e-51 | -8.615850e-47 |
| Msa0025560 | Msa1344450 | 0.829439 | 5.144927e-55 | -8.615850e-47 |
| Msa0025560 | Msa1349420 | 0.803678 | 3.108599e-49 | -8.615850e-47 |
| Msa0025560 | Msa1357840 | 0.800301 | 1.536867e-48 | -8.615850e-47 |
| Msa0025560 | Msa1364690 | 0.815841 | 7.516614e-52 | -8.615850e-47 |
| Msa0025560 | Msa1365230 | 0.823821 | 1.126740e-53 | -8.615850e-47 |
| Msa0025560 | Msa1376880 | 0.824834 | 6.511367e-54 | -8.615850e-47 |
| Msa0025560 | Msa1377190 | 0.811471 | 6.887174e-51 | -8.615850e-47 |
| Msa0025560 | Msa1379270 | -0.803126 | 4.045943e-49 | -8.615850e-47 |
| Msa0025560 | Msa1384130 | 0.828926 | 6.851790e-55 | -8.615850e-47 |
| Msa0025560 | Msa1386830 | 0.810111 | 1.355970e-50 | -8.615850e-47 |
| Msa0025560 | Msa1395080 | 0.842237 | 2.923838e-58 | -8.615850e-47 |
| Msa0025560 | Msa1405830 | 0.806705 | 7.224046e-50 | -8.615850e-47 |
| Msa0025560 | Msa1407810 | 0.856032 | 4.230383e-62 | -8.615850e-47 |
| Msa0025560 | Msa1417220 | 0.822230 | 2.648028e-53 | -8.615850e-47 |
| Msa0025560 | Msa1433040 | 0.801374 | 9.277813e-49 | -8.615850e-47 |
| Msa0025560 | Msa1433360 | 0.863571 | 2.263235e-64 | -8.615850e-47 |
| Msa0025560 | Msa1436400 | 0.802425 | 5.644500e-49 | -8.615850e-47 |
| Msa0025560 | Msa1437590 | 0.823015 | 1.739145e-53 | -8.615850e-47 |
| Msa0025560 | Msa1437780 | 0.858291 | 9.111136e-63 | -8.615850e-47 |
| Msa0025560 | Msa1445530 | 0.854731 | 1.012286e-61 | -8.615850e-47 |
| Msa0025560 | Msa1455200 | 0.823439 | 1.384242e-53 | -8.615850e-47 |
| Msa0025560 | Msa1458270 | 0.824243 | 8.968862e-54 | -8.615850e-47 |
| Msa0025560 | Msa1462610 | 0.819239 | 1.289290e-52 | -8.615850e-47 |
| Msa0025560 | Msa1463640 | 0.818434 | 1.964526e-52 | -8.615850e-47 |
| Msa0025560 | Msa1464140 | 0.801696 | 7.972342e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0025560 | MtrunA17_Chr1g0180331 | 96.853 | 286 | 8 | 1 | 1 | 285 | 1 | 286 | 0.0 | 584 |
| Msa0025560 | MtrunA17_Chr1g0180371 | 64.000 | 250 | 88 | 2 | 24 | 272 | 25 | 273 | 2.68e-115 | 333 |
| Msa0025560 | MtrunA17_Chr4g0028741 | 46.545 | 275 | 139 | 4 | 3 | 274 | 1 | 270 | 2.31e-86 | 259 |
| Msa0025560 | MtrunA17_Chr4g0028711 | 50.407 | 246 | 117 | 3 | 29 | 273 | 27 | 268 | 2.60e-86 | 259 |
| Msa0025560 | MtrunA17_Chr7g0264911 | 58.571 | 210 | 83 | 4 | 66 | 272 | 1 | 209 | 1.62e-80 | 242 |
| Msa0025560 | MtrunA17_Chr4g0028721 | 50.226 | 221 | 105 | 3 | 33 | 252 | 5 | 221 | 5.72e-76 | 232 |
| Msa0025560 | MtrunA17_Chr7g0257091 | 42.491 | 273 | 145 | 7 | 14 | 283 | 7 | 270 | 1.26e-70 | 219 |
| Msa0025560 | MtrunA17_Chr1g0178591 | 38.376 | 271 | 151 | 5 | 16 | 275 | 1 | 266 | 2.11e-63 | 200 |
| Msa0025560 | MtrunA17_Chr1g0178601 | 35.821 | 268 | 157 | 5 | 14 | 275 | 8 | 266 | 8.27e-59 | 188 |
| Msa0025560 | MtrunA17_Chr4g0028731 | 46.154 | 169 | 87 | 2 | 32 | 200 | 4 | 168 | 3.75e-48 | 159 |
| Msa0025560 | MtrunA17_Chr1g0178541 | 36.709 | 158 | 92 | 2 | 124 | 275 | 25 | 180 | 3.51e-29 | 109 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0025560 | AT1G08080.1 | 52.459 | 244 | 111 | 3 | 31 | 273 | 33 | 272 | 3.26e-89 | 267 |
| Msa0025560 | AT2G28210.1 | 46.691 | 272 | 133 | 5 | 10 | 273 | 5 | 272 | 7.49e-85 | 256 |
| Msa0025560 | AT4G20990.1 | 46.067 | 267 | 136 | 4 | 7 | 272 | 4 | 263 | 2.65e-80 | 244 |
| Msa0025560 | AT1G08065.1 | 47.126 | 261 | 131 | 5 | 15 | 272 | 12 | 268 | 1.98e-76 | 234 |
| Msa0025560 | AT4G21000.1 | 45.933 | 209 | 106 | 3 | 27 | 235 | 26 | 227 | 1.73e-64 | 203 |
| Msa0025560 | AT5G04180.1 | 40.154 | 259 | 151 | 2 | 16 | 273 | 4 | 259 | 4.56e-64 | 202 |
| Msa0025560 | AT3G52720.3 | 35.688 | 269 | 153 | 6 | 15 | 271 | 4 | 264 | 2.68e-53 | 175 |
| Msa0025560 | AT3G52720.4 | 35.688 | 269 | 153 | 6 | 15 | 271 | 4 | 264 | 2.68e-53 | 175 |
| Msa0025560 | AT3G52720.1 | 35.688 | 269 | 153 | 6 | 15 | 271 | 4 | 264 | 2.68e-53 | 175 |
| Msa0025560 | AT5G56330.1 | 39.592 | 245 | 104 | 5 | 31 | 273 | 133 | 335 | 2.90e-49 | 167 |
| Msa0025560 | AT3G52720.2 | 34.764 | 233 | 132 | 6 | 15 | 235 | 4 | 228 | 6.26e-43 | 147 |
| Msa0025560 | AT5G56330.2 | 44.068 | 177 | 92 | 5 | 31 | 204 | 133 | 305 | 8.39e-41 | 144 |
| Msa0025560 | AT2G28210.2 | 41.722 | 151 | 76 | 4 | 10 | 149 | 5 | 154 | 1.68e-35 | 125 |
Find 58 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGAATGTCGTAGGTATTT+TGG | 0.225329 | 1_1:-48871675 | Msa0025560:intron |
| GAAGAAGAAGAAAGAGTAAT+AGG | 0.241207 | 1_1:-48870603 | Msa0025560:CDS |
| TGCATTGGAAGATTTATATT+TGG | 0.272644 | 1_1:+48872772 | None:intergenic |
| AATATATCTTGCCTTTAGTT+TGG | 0.276014 | 1_1:+48870559 | None:intergenic |
| ATCTTGTTTCCCTTAGGATT+TGG | 0.276829 | 1_1:+48870804 | None:intergenic |
| TTGATAACTTGACGATAGTT+TGG | 0.301018 | 1_1:+48872797 | None:intergenic |
| GTTGGTGCTTTCTATAAAAT+TGG | 0.304303 | 1_1:-48870774 | Msa0025560:CDS |
| TGAAAAGGGGCCACATCATT+GGG | 0.321798 | 1_1:-48872906 | Msa0025560:CDS |
| CACCTGAGAGAGAAAAGAAT+TGG | 0.332021 | 1_1:+48870746 | None:intergenic |
| TCTCTCATTAGACAAATCTA+TGG | 0.352209 | 1_1:+48872832 | None:intergenic |
| TACATACTTCCTGCCATTGA+TGG | 0.354563 | 1_1:+48871570 | None:intergenic |
| GTGAAAAGGGGCCACATCAT+TGG | 0.366240 | 1_1:-48872907 | Msa0025560:CDS |
| GTTGTGCTACTTTGTTTGAA+TGG | 0.383597 | 1_1:+48869901 | None:intergenic |
| AGAGAGTTCGATTATATTGA+AGG | 0.392656 | 1_1:-48872932 | Msa0025560:CDS |
| TATATTGAAGGAAGTGAAAA+GGG | 0.411180 | 1_1:-48872920 | Msa0025560:CDS |
| CTATTGTTATGTGGCTGCCT+TGG | 0.418783 | 1_1:+48869949 | None:intergenic |
| TTGTGCTACTTTGTTTGAAT+GGG | 0.456274 | 1_1:+48869902 | None:intergenic |
| AAGATATATTATAGATATGT+TGG | 0.456587 | 1_1:-48870546 | Msa0025560:CDS |
| TTATATTGAAGGAAGTGAAA+AGG | 0.457697 | 1_1:-48872921 | Msa0025560:CDS |
| TCTATTGATGATAGTTGCAT+TGG | 0.461958 | 1_1:+48872757 | None:intergenic |
| TCAATAAGAGCTCAAGAAGT+TGG | 0.462460 | 1_1:-48873101 | Msa0025560:intron |
| CCTTTAGTTTGGATTTGTGA+GGG | 0.478336 | 1_1:+48870570 | None:intergenic |
| CCTTCTGAACATTCCATCAA+TGG | 0.483593 | 1_1:-48871583 | Msa0025560:CDS |
| ACAGCAATCTTGTTTCCCTT+AGG | 0.488040 | 1_1:+48870798 | None:intergenic |
| ACCTGAGAGAGAAAAGAATT+GGG | 0.488834 | 1_1:+48870747 | None:intergenic |
| GCATGTAAGTCCAAATCCTA+AGG | 0.503479 | 1_1:-48870814 | Msa0025560:CDS |
| AATGCAACTATCATCAATAG+AGG | 0.507721 | 1_1:-48872755 | Msa0025560:CDS |
| GCCTTTAGTTTGGATTTGTG+AGG | 0.512216 | 1_1:+48870569 | None:intergenic |
| GCTGGCTCAATACGTATCAA+TGG | 0.514482 | 1_1:-48871643 | Msa0025560:CDS |
| ACAACTCCTCCTTGCACTGA+AGG | 0.515253 | 1_1:-48870516 | Msa0025560:CDS |
| ATATGCTCACCGCAATATCA+TGG | 0.524254 | 1_1:+48872732 | None:intergenic |
| AAGGAGAGTGCCAGTGACAT+TGG | 0.529345 | 1_1:+48871602 | None:intergenic |
| CCCTCACAAATCCAAACTAA+AGG | 0.532526 | 1_1:-48870570 | Msa0025560:CDS |
| GACAGTTTCAAAAGCACAAG+TGG | 0.535548 | 1_1:-48870117 | Msa0025560:CDS |
| TGTATGTCTCTATTGTTATG+TGG | 0.539821 | 1_1:+48869940 | None:intergenic |
| CATGTGGAACCTTGACAAGA+AGG | 0.544132 | 1_1:-48870490 | Msa0025560:intron |
| GAATGGGCAGCTTGTAAACA+TGG | 0.547630 | 1_1:-48872869 | Msa0025560:CDS |
| CTGAACATTCCATCAATGGC+AGG | 0.549730 | 1_1:-48871579 | Msa0025560:CDS |
| AAGCATGAGTGAAGCTCGAA+GGG | 0.565536 | 1_1:+48873148 | None:intergenic |
| CTCTCATTAGACAAATCTAT+GGG | 0.570666 | 1_1:+48872833 | None:intergenic |
| TGAATGGGTAGTATTTGTGT+AGG | 0.575102 | 1_1:+48869917 | None:intergenic |
| CAGAGATGAATGCAAGGCCA+AGG | 0.578908 | 1_1:-48869966 | Msa0025560:CDS |
| AAAGCATGAGTGAAGCTCGA+AGG | 0.587705 | 1_1:+48873147 | None:intergenic |
| CACATGACACCTTCAGTGCA+AGG | 0.589535 | 1_1:+48870507 | None:intergenic |
| AAAAGGGGCCACATCATTGG+GGG | 0.598096 | 1_1:-48872904 | Msa0025560:CDS |
| GAAAAGGGGCCACATCATTG+GGG | 0.601409 | 1_1:-48872905 | Msa0025560:CDS |
| CCATTGATGGAATGTTCAGA+AGG | 0.605461 | 1_1:+48871583 | None:intergenic |
| CTTGCACTGAAGGTGTCATG+TGG | 0.609373 | 1_1:-48870506 | Msa0025560:CDS |
| CAATAGAGGCCATGATATTG+CGG | 0.609893 | 1_1:-48872741 | Msa0025560:intron |
| AGCATGCAGAGATGAATGCA+AGG | 0.630599 | 1_1:-48869972 | Msa0025560:CDS |
| GGAAACAAGATTGCTGTGGT+TGG | 0.632458 | 1_1:-48870792 | Msa0025560:CDS |
| CATGTAAGTCCAAATCCTAA+GGG | 0.667122 | 1_1:-48870813 | Msa0025560:CDS |
| ATATTGAAGGAAGTGAAAAG+GGG | 0.680584 | 1_1:-48872919 | Msa0025560:CDS |
| TAAGGGAAACAAGATTGCTG+TGG | 0.684027 | 1_1:-48870796 | Msa0025560:CDS |
| GGAAGAAGACATAAAACACA+TGG | 0.697390 | 1_1:-48870631 | Msa0025560:CDS |
| ATATGACTTAGAGATGCACA+TGG | 0.747184 | 1_1:-48870838 | Msa0025560:CDS |
| ATGACACCTTCAGTGCAAGG+AGG | 0.754290 | 1_1:+48870510 | None:intergenic |
| AAAGGGGCCACATCATTGGG+GGG | 0.779968 | 1_1:-48872903 | Msa0025560:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATTTTATGATTTTTTGT+TGG | - | chr1_1:48870458-48870477 | Msa0025560:intron | 10.0% |
| !! | ATATAATATAAATTTAAACC+CGG | - | chr1_1:48870640-48870659 | Msa0025560:intron | 10.0% |
| !! | AATTAATAAATATGTCTATA+GGG | + | chr1_1:48870746-48870765 | None:intergenic | 10.0% |
| !! | AAATTAATAAATATGTCTAT+AGG | + | chr1_1:48870747-48870766 | None:intergenic | 10.0% |
| !!! | TTTTTTTAATTAATCAGAAA+TGG | - | chr1_1:48871191-48871210 | Msa0025560:intron | 10.0% |
| !! | GCATAATATAATTTATTAAA+AGG | + | chr1_1:48871758-48871777 | None:intergenic | 10.0% |
| !! | AGTTTATTCTAGATAAAAAA+GGG | + | chr1_1:48870043-48870062 | None:intergenic | 15.0% |
| !! | TAGTTTATTCTAGATAAAAA+AGG | + | chr1_1:48870044-48870063 | None:intergenic | 15.0% |
| !! | AAAAAATTATTTACCAACAA+AGG | + | chr1_1:48871175-48871194 | None:intergenic | 15.0% |
| !! | AAATAAAAAACAAATTAAGG+TGG | - | chr1_1:48871539-48871558 | Msa0025560:intron | 15.0% |
| !!! | TATTTTTTATCTCATAAAAG+CGG | + | chr1_1:48871573-48871592 | None:intergenic | 15.0% |
| !! | ATCAATGTTAAAAAAAAAAC+AGG | - | chr1_1:48871811-48871830 | Msa0025560:intron | 15.0% |
| !!! | TAAAAATGTCTAAAATTCAA+TGG | - | chr1_1:48871933-48871952 | Msa0025560:intron | 15.0% |
| !! | AAGATATATTATAGATATGT+TGG | - | chr1_1:48872521-48872540 | Msa0025560:intron | 15.0% |
| !! | AGAAGAAAAATGAATAAATA+AGG | + | chr1_1:48872843-48872862 | None:intergenic | 15.0% |
| !!! | TTTTTTGTTGTTGTTAAAAG+AGG | - | chr1_1:48870372-48870391 | Msa0025560:intron | 20.0% |
| !! | TATAATTATATCCGATTCTA+GGG | + | chr1_1:48870442-48870461 | None:intergenic | 20.0% |
| !! | ATATAATTATATCCGATTCT+AGG | + | chr1_1:48870443-48870462 | None:intergenic | 20.0% |
| !! | AAAGTCAAATGTATTTGATT+CGG | - | chr1_1:48870572-48870591 | Msa0025560:CDS | 20.0% |
| !! | AATATACTAGTACTACTATA+TGG | + | chr1_1:48870714-48870733 | None:intergenic | 20.0% |
| !!! | ATTGCTTCTTTTTTTTTTGA+AGG | - | chr1_1:48870784-48870803 | Msa0025560:CDS | 20.0% |
| !!! | TATCTTTTTGATACTTATGT+TGG | + | chr1_1:48870993-48871012 | None:intergenic | 20.0% |
| !! | TTCACATATAAATGATCTAA+TGG | + | chr1_1:48871378-48871397 | None:intergenic | 20.0% |
| !!! | AATTCTTAAATTTTCTAGCA+AGG | + | chr1_1:48871732-48871751 | None:intergenic | 20.0% |
| ! | TTATATTGAAGGAAGTGAAA+AGG | - | chr1_1:48870146-48870165 | Msa0025560:intron | 25.0% |
| ! | TATATTGAAGGAAGTGAAAA+GGG | - | chr1_1:48870147-48870166 | Msa0025560:intron | 25.0% |
| ! | TGCATTGGAAGATTTATATT+TGG | + | chr1_1:48870298-48870317 | None:intergenic | 25.0% |
| ! | TAACAACAACAAAAAAGTCA+TGG | + | chr1_1:48870368-48870387 | None:intergenic | 25.0% |
| !!! | TGTTGTTAAAAGAGGTTTTT+TGG | - | chr1_1:48870380-48870399 | Msa0025560:intron | 25.0% |
| !! | TGTAGTACATAAATTGACTT+TGG | - | chr1_1:48870900-48870919 | Msa0025560:intron | 25.0% |
| ! | ATCAAGATACAAATATCGAT+CGG | + | chr1_1:48871113-48871132 | None:intergenic | 25.0% |
| ! | TACGTGAAAGATTAACTTAA+TGG | + | chr1_1:48871891-48871910 | None:intergenic | 25.0% |
| !! | TACATACTTCTTTTACCAAA+AGG | - | chr1_1:48872129-48872148 | Msa0025560:intron | 25.0% |
| ! | AATGAATCTGTGAATTAAGT+TGG | - | chr1_1:48872415-48872434 | Msa0025560:intron | 25.0% |
| ! | AATATATCTTGCCTTTAGTT+TGG | + | chr1_1:48872511-48872530 | None:intergenic | 25.0% |
| ! | ATACTCGATAATTAATTCGT+TGG | - | chr1_1:48872640-48872659 | Msa0025560:intron | 25.0% |
| !! | AATGTAATTTTCAGCTCATT+TGG | + | chr1_1:48872680-48872699 | None:intergenic | 25.0% |
| !!! | AGTTTGACTTGATTAATTCA+CGG | - | chr1_1:48872734-48872753 | Msa0025560:intron | 25.0% |
| !! | TGCTTTTATCTAATGAAAGT+TGG | + | chr1_1:48873042-48873061 | None:intergenic | 25.0% |
| !!! | CAAATTTACTGTTTTAACTG+TGG | - | chr1_1:48873062-48873081 | Msa0025560:intron | 25.0% |
| ! | TGAAATTGTGCATTTTGTAG+AGG | - | chr1_1:48870107-48870126 | Msa0025560:CDS | 30.0% |
| AGAGAGTTCGATTATATTGA+AGG | - | chr1_1:48870135-48870154 | Msa0025560:intron | 30.0% | |
| ATATTGAAGGAAGTGAAAAG+GGG | - | chr1_1:48870148-48870167 | Msa0025560:intron | 30.0% | |
| CTCTCATTAGACAAATCTAT+GGG | + | chr1_1:48870237-48870256 | None:intergenic | 30.0% | |
| TCTCTCATTAGACAAATCTA+TGG | + | chr1_1:48870238-48870257 | None:intergenic | 30.0% | |
| ! | TTGATAACTTGACGATAGTT+TGG | + | chr1_1:48870273-48870292 | None:intergenic | 30.0% |
| ! | TCTATTGATGATAGTTGCAT+TGG | + | chr1_1:48870313-48870332 | None:intergenic | 30.0% |
| AATGCAACTATCATCAATAG+AGG | - | chr1_1:48870312-48870331 | Msa0025560:intron | 30.0% | |
| TCAATCATACAATCATCCAT+GGG | + | chr1_1:48870418-48870437 | None:intergenic | 30.0% | |
| ATCAATCATACAATCATCCA+TGG | + | chr1_1:48870419-48870438 | None:intergenic | 30.0% | |
| CTCTAGTAATACAAATCGAA+AGG | + | chr1_1:48870489-48870508 | None:intergenic | 30.0% | |
| !!! | GTTATATTTTAGTGTCTGAC+AGG | + | chr1_1:48871091-48871110 | None:intergenic | 30.0% |
| !!! | GTATGTTTTTCAATTTGCTG+AGG | - | chr1_1:48871218-48871237 | Msa0025560:intron | 30.0% |
| CATTTATATGTGAATGTCGT+AGG | - | chr1_1:48871384-48871403 | Msa0025560:intron | 30.0% | |
| ACATTGGTGCAAAAAGAATT+TGG | + | chr1_1:48871452-48871471 | None:intergenic | 30.0% | |
| ! | TAATGGTGTGTTTTCATTTC+AGG | + | chr1_1:48871874-48871893 | None:intergenic | 30.0% |
| !!! | ATTTTCAGGTAATGTAGAGT+CGG | + | chr1_1:48872059-48872078 | None:intergenic | 30.0% |
| AAATCACAACCAAATCGATA+TGG | + | chr1_1:48872158-48872177 | None:intergenic | 30.0% | |
| ! | GTTGGTGCTTTCTATAAAAT+TGG | - | chr1_1:48872293-48872312 | Msa0025560:intron | 30.0% |
| ! | TGTTGCTATTAGAGTAATGA+TGG | + | chr1_1:48872378-48872397 | None:intergenic | 30.0% |
| GAAGAAGAAGAAAGAGTAAT+AGG | - | chr1_1:48872464-48872483 | Msa0025560:intron | 30.0% | |
| !! | GTTTGACTTGATTAATTCAC+GGG | - | chr1_1:48872735-48872754 | Msa0025560:intron | 30.0% |
| TTGACTCAATAGAATTTGTC+CGG | + | chr1_1:48872783-48872802 | None:intergenic | 30.0% | |
| ! | TGTTGTGTCATTCATTGATT+TGG | - | chr1_1:48872900-48872919 | Msa0025560:CDS | 30.0% |
| AAACTGTCCTTATCTGAATA+GGG | + | chr1_1:48872938-48872957 | None:intergenic | 30.0% | |
| TGTATGTCTCTATTGTTATG+TGG | + | chr1_1:48873130-48873149 | None:intergenic | 30.0% | |
| !! | TTGTGCTACTTTGTTTGAAT+GGG | + | chr1_1:48873168-48873187 | None:intergenic | 30.0% |
| TCAATAAGAGCTCAAGAAGT+TGG | - | chr1_1:48869966-48869985 | Msa0025560:CDS | 35.0% | |
| GTATGATTGATCCCTAGAAT+CGG | - | chr1_1:48870428-48870447 | Msa0025560:intron | 35.0% | |
| TATGGTATACGTAGTAACGT+AGG | + | chr1_1:48870696-48870715 | None:intergenic | 35.0% | |
| !! | TTATGTGCATGAGTTTTGTG+CGG | + | chr1_1:48870874-48870893 | None:intergenic | 35.0% |
| CTCTTAAACTCAACCTTTGT+TGG | - | chr1_1:48871159-48871178 | Msa0025560:intron | 35.0% | |
| !! | TCCAACAAACGTTTGACTTT+TGG | - | chr1_1:48871273-48871292 | Msa0025560:intron | 35.0% |
| ! | TGTGAATGTCGTAGGTATTT+TGG | - | chr1_1:48871392-48871411 | Msa0025560:intron | 35.0% |
| !! | AATGTCGTAGGTATTTTGGA+GGG | - | chr1_1:48871396-48871415 | Msa0025560:intron | 35.0% |
| ! | AAATCGATATGGACTCCTTT+TGG | + | chr1_1:48872147-48872166 | None:intergenic | 35.0% |
| ! | AAAAGGAGTCCATATCGATT+TGG | - | chr1_1:48872146-48872165 | Msa0025560:intron | 35.0% |
| ATATGACTTAGAGATGCACA+TGG | - | chr1_1:48872229-48872248 | Msa0025560:intron | 35.0% | |
| CATGTAAGTCCAAATCCTAA+GGG | - | chr1_1:48872254-48872273 | Msa0025560:intron | 35.0% | |
| ! | ATCTTGTTTCCCTTAGGATT+TGG | + | chr1_1:48872266-48872285 | None:intergenic | 35.0% |
| ACCTGAGAGAGAAAAGAATT+GGG | + | chr1_1:48872323-48872342 | None:intergenic | 35.0% | |
| GGAAGAAGACATAAAACACA+TGG | - | chr1_1:48872436-48872455 | Msa0025560:intron | 35.0% | |
| !! | CCTTTAGTTTGGATTTGTGA+GGG | + | chr1_1:48872500-48872519 | None:intergenic | 35.0% |
| ! | CAACTTTTACCTTCTTGTCA+AGG | + | chr1_1:48872589-48872608 | None:intergenic | 35.0% |
| GATAATTAATTCGTTGGACG+TGG | - | chr1_1:48872646-48872665 | Msa0025560:intron | 35.0% | |
| AAGTGGAGTTGAACTTGATT+CGG | + | chr1_1:48872807-48872826 | None:intergenic | 35.0% | |
| CAAACAACCCTATTCAGATA+AGG | - | chr1_1:48872928-48872947 | Msa0025560:CDS | 35.0% | |
| GAAACTGTCCTTATCTGAAT+AGG | + | chr1_1:48872939-48872958 | None:intergenic | 35.0% | |
| TGAATGGGTAGTATTTGTGT+AGG | + | chr1_1:48873153-48873172 | None:intergenic | 35.0% | |
| !! | GTTGTGCTACTTTGTTTGAA+TGG | + | chr1_1:48873169-48873188 | None:intergenic | 35.0% |
| GGGGGAGATAAAAGAAGAAT+GGG | - | chr1_1:48870182-48870201 | Msa0025560:intron | 40.0% | |
| CAATAGAGGCCATGATATTG+CGG | - | chr1_1:48870326-48870345 | Msa0025560:intron | 40.0% | |
| ATATGCTCACCGCAATATCA+TGG | + | chr1_1:48870338-48870357 | None:intergenic | 40.0% | |
| TTAAACCCGGCTGCATTTAT+TGG | - | chr1_1:48870653-48870672 | Msa0025560:intron | 40.0% | |
| TGGATGATGACACAACTAGT+AGG | + | chr1_1:48871257-48871276 | None:intergenic | 40.0% | |
| GCCAAAAGTCAAACGTTTGT+TGG | + | chr1_1:48871277-48871296 | None:intergenic | 40.0% | |
| !! | GAATGTCGTAGGTATTTTGG+AGG | - | chr1_1:48871395-48871414 | Msa0025560:intron | 40.0% |
| !! | ATGTCGTAGGTATTTTGGAG+GGG | - | chr1_1:48871397-48871416 | Msa0025560:intron | 40.0% |
| ! | TCTTTTTGCACCAATGTCAC+TGG | - | chr1_1:48871455-48871474 | Msa0025560:intron | 40.0% |
| CCATTGATGGAATGTTCAGA+AGG | + | chr1_1:48871487-48871506 | None:intergenic | 40.0% | |
| CCTTCTGAACATTCCATCAA+TGG | - | chr1_1:48871484-48871503 | Msa0025560:intron | 40.0% | |
| TACATACTTCCTGCCATTGA+TGG | + | chr1_1:48871500-48871519 | None:intergenic | 40.0% | |
| !! | AGTCAACTAAGGTTGGTACT+TGG | + | chr1_1:48871708-48871727 | None:intergenic | 40.0% |
| TCTAGCAAGGAAGTCAACTA+AGG | + | chr1_1:48871719-48871738 | None:intergenic | 40.0% | |
| ATCTTGAATCGTCACGATGT+GGG | + | chr1_1:48871999-48872018 | None:intergenic | 40.0% | |
| AATCTTGAATCGTCACGATG+TGG | + | chr1_1:48872000-48872019 | None:intergenic | 40.0% | |
| ! | CATGGGAGGTAATCATTTTC+AGG | + | chr1_1:48872073-48872092 | None:intergenic | 40.0% |
| CTGAAAATGATTACCTCCCA+TGG | - | chr1_1:48872071-48872090 | Msa0025560:intron | 40.0% | |
| AAAATGATTACCTCCCATGG+AGG | - | chr1_1:48872074-48872093 | Msa0025560:intron | 40.0% | |
| GCATGTAAGTCCAAATCCTA+AGG | - | chr1_1:48872253-48872272 | Msa0025560:intron | 40.0% | |
| ! | ACAGCAATCTTGTTTCCCTT+AGG | + | chr1_1:48872272-48872291 | None:intergenic | 40.0% |
| TAAGGGAAACAAGATTGCTG+TGG | - | chr1_1:48872271-48872290 | Msa0025560:intron | 40.0% | |
| ! | TCCCAATTCTTTTCTCTCTC+AGG | - | chr1_1:48872319-48872338 | Msa0025560:intron | 40.0% |
| CACCTGAGAGAGAAAAGAAT+TGG | + | chr1_1:48872324-48872343 | None:intergenic | 40.0% | |
| CCCTCACAAATCCAAACTAA+AGG | - | chr1_1:48872497-48872516 | Msa0025560:intron | 40.0% | |
| !! | GCCTTTAGTTTGGATTTGTG+AGG | + | chr1_1:48872501-48872520 | None:intergenic | 40.0% |
| ! | GACAGTTTCAAAAGCACAAG+TGG | - | chr1_1:48872950-48872969 | Msa0025560:intron | 40.0% |
| ! | AAGCACAAGTGGATCTTTTG+AGG | - | chr1_1:48872961-48872980 | Msa0025560:intron | 40.0% |
| AAGCATGAGTGAAGCTCGAA+GGG | + | chr1_1:48869922-48869941 | None:intergenic | 45.0% | |
| AAAGCATGAGTGAAGCTCGA+AGG | + | chr1_1:48869923-48869942 | None:intergenic | 45.0% | |
| TGAAAAGGGGCCACATCATT+GGG | - | chr1_1:48870161-48870180 | Msa0025560:intron | 45.0% | |
| TTTATCTCCCCCCAATGATG+TGG | + | chr1_1:48870174-48870193 | None:intergenic | 45.0% | |
| GGGGGGAGATAAAAGAAGAA+TGG | - | chr1_1:48870181-48870200 | Msa0025560:intron | 45.0% | |
| GAATGGGCAGCTTGTAAACA+TGG | - | chr1_1:48870198-48870217 | Msa0025560:intron | 45.0% | |
| TTGGTAGAATCATGCTCCCA+TGG | - | chr1_1:48870399-48870418 | Msa0025560:intron | 45.0% | |
| CATGTCCAATAAATGCAGCC+GGG | + | chr1_1:48870661-48870680 | None:intergenic | 45.0% | |
| GCATGTCCAATAAATGCAGC+CGG | + | chr1_1:48870662-48870681 | None:intergenic | 45.0% | |
| TATGCAGCAGAGCAAAGCTT+GGG | + | chr1_1:48870939-48870958 | None:intergenic | 45.0% | |
| TTATGCAGCAGAGCAAAGCT+TGG | + | chr1_1:48870940-48870959 | None:intergenic | 45.0% | |
| ! | GCTGGCTCAATACGTATCAA+TGG | - | chr1_1:48871424-48871443 | Msa0025560:intron | 45.0% |
| CTGAACATTCCATCAATGGC+AGG | - | chr1_1:48871488-48871507 | Msa0025560:intron | 45.0% | |
| GCAAGGAAGTCAACTAAGGT+TGG | + | chr1_1:48871715-48871734 | None:intergenic | 45.0% | |
| TTCTTGCACGTTTCCTCCAT+GGG | + | chr1_1:48872090-48872109 | None:intergenic | 45.0% | |
| TTTCTTGCACGTTTCCTCCA+TGG | + | chr1_1:48872091-48872110 | None:intergenic | 45.0% | |
| GGAAACAAGATTGCTGTGGT+TGG | - | chr1_1:48872275-48872294 | Msa0025560:intron | 45.0% | |
| CATGTGGAACCTTGACAAGA+AGG | - | chr1_1:48872577-48872596 | Msa0025560:intron | 45.0% | |
| ! | ACTCGAGTTGTGTATTGAGC+CGG | - | chr1_1:48872761-48872780 | Msa0025560:CDS | 45.0% |
| !!! | ACAAGTGGATCTTTTGAGGC+AGG | - | chr1_1:48872965-48872984 | Msa0025560:intron | 45.0% |
| AGCATGCAGAGATGAATGCA+AGG | - | chr1_1:48873095-48873114 | Msa0025560:intron | 45.0% | |
| CTATTGTTATGTGGCTGCCT+TGG | + | chr1_1:48873121-48873140 | None:intergenic | 45.0% | |
| !! | TATAAATAAAAAACAAATTA+AGG | - | chr1_1:48871536-48871555 | Msa0025560:intron | 5.0% |
| GTGAAAAGGGGCCACATCAT+TGG | - | chr1_1:48870160-48870179 | Msa0025560:intron | 50.0% | |
| GAAAAGGGGCCACATCATTG+GGG | - | chr1_1:48870162-48870181 | Msa0025560:intron | 50.0% | |
| AAAAGGGGCCACATCATTGG+GGG | - | chr1_1:48870163-48870182 | Msa0025560:intron | 50.0% | |
| !! | GTATTTTGGAGGGGTGATGC+TGG | - | chr1_1:48871406-48871425 | Msa0025560:intron | 50.0% |
| !! | AAGGAGAGTGCCAGTGACAT+TGG | + | chr1_1:48871468-48871487 | None:intergenic | 50.0% |
| ACAACTCCTCCTTGCACTGA+AGG | - | chr1_1:48872551-48872570 | Msa0025560:intron | 50.0% | |
| ATGACACCTTCAGTGCAAGG+AGG | + | chr1_1:48872560-48872579 | None:intergenic | 50.0% | |
| CACATGACACCTTCAGTGCA+AGG | + | chr1_1:48872563-48872582 | None:intergenic | 50.0% | |
| !! | CTTGCACTGAAGGTGTCATG+TGG | - | chr1_1:48872561-48872580 | Msa0025560:intron | 50.0% |
| AAGGCTGAGCACGAATCAAG+TGG | + | chr1_1:48872824-48872843 | None:intergenic | 50.0% | |
| CAGAGATGAATGCAAGGCCA+AGG | - | chr1_1:48873101-48873120 | Msa0025560:intron | 50.0% | |
| AAAGGGGCCACATCATTGGG+GGG | - | chr1_1:48870164-48870183 | Msa0025560:intron | 55.0% | |
| CAGCAGAGCAAAGCTTGGGA+TGG | + | chr1_1:48870935-48870954 | None:intergenic | 55.0% | |
| TTGCACGTTTCCTCCATGGG+AGG | + | chr1_1:48872087-48872106 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 48869891 | 48873198 | 48869891 | ID=Msa0025560;Name=Msa0025560 |
| chr1_1 | mRNA | 48869891 | 48873198 | 48869891 | ID=Msa0025560-mRNA-1;Parent=Msa0025560;Name=Msa0025560-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.5|0.28|1|1|1|7|0|285 |
| chr1_1 | exon | 48873102 | 48873198 | 48873102 | ID=Msa0025560-mRNA-1:exon:14079;Parent=Msa0025560-mRNA-1 |
| chr1_1 | exon | 48872742 | 48872962 | 48872742 | ID=Msa0025560-mRNA-1:exon:14078;Parent=Msa0025560-mRNA-1 |
| chr1_1 | exon | 48871577 | 48871683 | 48871577 | ID=Msa0025560-mRNA-1:exon:14077;Parent=Msa0025560-mRNA-1 |
| chr1_1 | exon | 48870749 | 48870860 | 48870749 | ID=Msa0025560-mRNA-1:exon:14076;Parent=Msa0025560-mRNA-1 |
| chr1_1 | exon | 48870491 | 48870655 | 48870491 | ID=Msa0025560-mRNA-1:exon:14075;Parent=Msa0025560-mRNA-1 |
| chr1_1 | exon | 48870091 | 48870144 | 48870091 | ID=Msa0025560-mRNA-1:exon:14074;Parent=Msa0025560-mRNA-1 |
| chr1_1 | exon | 48869891 | 48869992 | 48869891 | ID=Msa0025560-mRNA-1:exon:14073;Parent=Msa0025560-mRNA-1 |
| chr1_1 | CDS | 48873102 | 48873198 | 48873102 | ID=Msa0025560-mRNA-1:cds;Parent=Msa0025560-mRNA-1 |
| chr1_1 | CDS | 48872742 | 48872962 | 48872742 | ID=Msa0025560-mRNA-1:cds;Parent=Msa0025560-mRNA-1 |
| chr1_1 | CDS | 48871577 | 48871683 | 48871577 | ID=Msa0025560-mRNA-1:cds;Parent=Msa0025560-mRNA-1 |
| chr1_1 | CDS | 48870749 | 48870860 | 48870749 | ID=Msa0025560-mRNA-1:cds;Parent=Msa0025560-mRNA-1 |
| chr1_1 | CDS | 48870491 | 48870655 | 48870491 | ID=Msa0025560-mRNA-1:cds;Parent=Msa0025560-mRNA-1 |
| chr1_1 | CDS | 48870091 | 48870144 | 48870091 | ID=Msa0025560-mRNA-1:cds;Parent=Msa0025560-mRNA-1 |
| chr1_1 | CDS | 48869891 | 48869992 | 48869891 | ID=Msa0025560-mRNA-1:cds;Parent=Msa0025560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
