AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0908500


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 100 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGTTCATGGTTCGATATTC+TGG 0.185586 6_2:+9656645 None:intergenic
TGCACGCCTCCGTTACCTTT+TGG 0.196515 6_2:-9655704 Msa0908500:CDS
CTGTTCCCTGGGATTGGCTT+TGG 0.228349 6_2:+9655520 None:intergenic
CAGCTCACGTACCGCTTTAA+TGG 0.245260 6_2:-9655999 Msa0908500:CDS
TGTTCCCTGGGATTGGCTTT+GGG 0.270024 6_2:+9655521 None:intergenic
TCATGCCTTTACTTCGTTCA+TGG 0.272664 6_2:+9656632 None:intergenic
GGCTGTGATACCGGAGGCTC+TGG 0.279951 6_2:-9656245 Msa0908500:CDS
TCTCAGGTAGACAGTTTCTA+TGG 0.287253 6_2:+9655669 None:intergenic
GGCAAAGAAGGCCTCCTTCC+GGG 0.289862 6_2:+9655569 None:intergenic
TCTAACGCCCACACCGGATA+TGG 0.325084 6_2:-9656050 Msa0908500:CDS
CAGAGAACCCATCGCTGTTT+CGG 0.333458 6_2:-9656266 Msa0908500:CDS
AGGGAACAGTGAAGCTTCAT+AGG 0.345840 6_2:-9655506 None:intergenic
TCCTCGGGCCAGACGGAGAT+TGG 0.349112 6_2:+9655733 None:intergenic
TCCCGTCGATGTGAGCTCTT+GGG 0.355274 6_2:-9655905 Msa0908500:CDS
GCTTCACTGTTCCCTGGGAT+TGG 0.355814 6_2:+9655514 None:intergenic
AGGCAAAGAAGGCCTCCTTC+CGG 0.382980 6_2:+9655568 None:intergenic
AAAGTTACTCTAGGGATAAC+AGG 0.383241 6_2:+9655873 None:intergenic
CATTAAAGCGGTACGTGAGC+TGG 0.384796 6_2:+9656000 None:intergenic
TTCCCGTCGATGTGAGCTCT+TGG 0.386490 6_2:-9655906 Msa0908500:CDS
AGCTCACGTACCGCTTTAAT+GGG 0.395506 6_2:-9655998 Msa0908500:CDS
CGCTGTTTCGGCTGTGATAC+CGG 0.403155 6_2:-9656254 Msa0908500:CDS
AATAGGAGAGCACTCATCTT+GGG 0.408942 6_2:-9656213 Msa0908500:CDS
CCCTTCTGCCTTTGCACTCG+AGG 0.411231 6_2:-9655757 Msa0908500:CDS
CTCACATCGACGGGAAGGTT+TGG 0.420533 6_2:+9655913 None:intergenic
TGTAGTATGTTCCAAGGGTT+GGG 0.424624 6_2:+9655968 None:intergenic
AGTTGAACAATCAAAATAGA+TGG 0.442588 6_2:-9656475 Msa0908500:CDS
CCACCAAGTTCGGGATGGAT+TGG 0.447763 6_2:-9656692 None:intergenic
CTGTAGTATGTTCCAAGGGT+TGG 0.452990 6_2:+9655967 None:intergenic
GAGACAGTTCGGTCCATATC+CGG 0.455659 6_2:+9656037 None:intergenic
ACAGACCAAGGGACAGTCTC+AGG 0.456050 6_2:+9655653 None:intergenic
CAGAACGTCGTGAGACAGTT+CGG 0.457061 6_2:+9656026 None:intergenic
CCTTCTGCCTTTGCACTCGA+GGG 0.461384 6_2:-9655756 Msa0908500:CDS
AAAAGCCCAAAGCCAATCCC+AGG 0.461472 6_2:-9655526 Msa0908500:CDS
GACTGTCCCTTGGTCTGTAC+TGG 0.464231 6_2:-9655648 Msa0908500:CDS
CCCCAAGAGCTCACATCGAC+GGG 0.472021 6_2:+9655904 None:intergenic
ATGAAGCTTCACTGTTCCCT+GGG 0.472889 6_2:+9655509 None:intergenic
TATGAAGCTTCACTGTTCCC+TGG 0.477188 6_2:+9655508 None:intergenic
GTTCGATATTCTGGTGTCCT+AGG 0.478291 6_2:+9656654 None:intergenic
TCCGACTTCCCCAGAGCCTC+CGG 0.480691 6_2:+9656235 None:intergenic
CTCGAGGGCCAATCTCCGTC+TGG 0.480699 6_2:-9655741 Msa0908500:CDS
GAATAGGAGAGCACTCATCT+TGG 0.487596 6_2:-9656214 Msa0908500:CDS
GCCTTCCACCTAAGCTGCGC+AGG 0.489457 6_2:-9655549 Msa0908500:CDS
GCAAAGAAGGCCTCCTTCCG+GGG 0.489774 6_2:+9655570 None:intergenic
GGCTCTGGGGAAGTCGGAAT+AGG 0.491163 6_2:-9656230 Msa0908500:CDS
ATTGCCTGATCGAATTGATC+AGG 0.499380 6_2:-9656450 Msa0908500:intron
GATGTCGGCTCTTCGCCACC+TGG 0.508239 6_2:+9655942 None:intergenic
TCCTGCGCAGCTTAGGTGGA+AGG 0.508478 6_2:+9655548 None:intergenic
GCTGTGATACCGGAGGCTCT+GGG 0.508804 6_2:-9656244 Msa0908500:CDS
CTCAGGTAGACAGTTTCTAT+GGG 0.510655 6_2:+9655670 None:intergenic
CCCTCGAGTGCAAAGGCAGA+AGG 0.511073 6_2:+9655756 None:intergenic
ATGACCTGATCAATTCGATC+AGG 0.514268 6_2:+9656446 None:intergenic
GAGGCGTGCAAAGGTTTCCT+CGG 0.526013 6_2:+9655717 None:intergenic
AGGCGTGCAAAGGTTTCCTC+GGG 0.527025 6_2:+9655718 None:intergenic
CCAGAGTGGTATCTCACTGA+TGG 0.527423 6_2:-9655601 Msa0908500:CDS
CCCGTCGATGTGAGCTCTTG+GGG 0.534121 6_2:-9655904 Msa0908500:CDS
CCTTGGTCTGTACTGGCACA+AGG 0.538614 6_2:-9655641 Msa0908500:CDS
ATTAAAGCGGTACGTGAGCT+GGG 0.539036 6_2:+9656001 None:intergenic
CAAAGAAGGCCTCCTTCCGG+GGG 0.541469 6_2:+9655571 None:intergenic
AAGGTTTGGCACCTCGATGT+CGG 0.545826 6_2:+9655927 None:intergenic
TGGGCGAACAGCCCAACCCT+TGG 0.548090 6_2:-9655979 Msa0908500:CDS
GCTTAGGTGGAAGGCAAAGA+AGG 0.550243 6_2:+9655557 None:intergenic
TCCCCAAGAGCTCACATCGA+CGG 0.555494 6_2:+9655903 None:intergenic
GCCAATCTCCGTCTGGCCCG+AGG 0.562208 6_2:-9655734 Msa0908500:CDS
TGGAGCTGTAGTATGTTCCA+AGG 0.564153 6_2:+9655962 None:intergenic
ACCGGAGGCTCTGGGGAAGT+CGG 0.567230 6_2:-9656236 Msa0908500:CDS
TATCACAGCCGAAACAGCGA+TGG 0.574058 6_2:+9656258 None:intergenic
TTGGAACATACTACAGCTCC+AGG 0.579135 6_2:-9655960 Msa0908500:CDS
GTCTACCTGAGACTGTCCCT+TGG 0.586612 6_2:-9655658 Msa0908500:CDS
GGGAACAGTGAAGCTTCATA+GGG 0.591786 6_2:-9655505 None:intergenic
AAGGTAACGGAGGCGTGCAA+AGG 0.595805 6_2:+9655708 None:intergenic
CCTCGAGTGCAAAGGCAGAA+GGG 0.595841 6_2:+9655757 None:intergenic
AAAGGTTTCCTCGGGCCAGA+CGG 0.597813 6_2:+9655726 None:intergenic
CTGTGATACCGGAGGCTCTG+GGG 0.598997 6_2:-9656243 Msa0908500:CDS
GGTGTGGTTCCTCTACGCCT+AGG 0.606362 6_2:-9656671 Msa0908500:CDS
TGGGGCGTAGGCCTCCCAAA+AGG 0.606913 6_2:+9655689 None:intergenic
GTTCGGTCCATATCCGGTGT+GGG 0.608178 6_2:+9656043 None:intergenic
AAGAGCTCACATCGACGGGA+AGG 0.613365 6_2:+9655908 None:intergenic
AGTTCGGTCCATATCCGGTG+TGG 0.618273 6_2:+9656042 None:intergenic
AAAGCCCAAAGCCAATCCCA+GGG 0.619579 6_2:-9655525 Msa0908500:CDS
GGGCTGTTCGCCCATTAAAG+CGG 0.619701 6_2:+9655988 None:intergenic
ATCACAGCCGAAACAGCGAT+GGG 0.621115 6_2:+9656259 None:intergenic
TTCTGGTGTCCTAGGCGTAG+AGG 0.622900 6_2:+9656662 None:intergenic
AGACAGTTTCTATGGGGCGT+AGG 0.622986 6_2:+9655677 None:intergenic
ATAGGAGAGCACTCATCTTG+GGG 0.623240 6_2:-9656212 Msa0908500:intron
GTAGGCCTCCCAAAAGGTAA+CGG 0.632223 6_2:+9655695 None:intergenic
AAGTTCGGGATGGATTGGTG+TGG 0.636372 6_2:-9656687 None:intergenic
GGAGCTGTAGTATGTTCCAA+GGG 0.640199 6_2:+9655963 None:intergenic
CCTTGTGCCAGTACAGACCA+AGG 0.645647 6_2:+9655641 None:intergenic
CAATGCTCTAACGCCCACAC+CGG 0.666176 6_2:-9656056 Msa0908500:CDS
AGATTGGCCCTCGAGTGCAA+AGG 0.670375 6_2:+9655749 None:intergenic
CCATCAGTGAGATACCACTC+TGG 0.671241 6_2:+9655601 None:intergenic
AAAGAAGGCCTCCTTCCGGG+GGG 0.675250 6_2:+9655572 None:intergenic
GAATTCTAGCTCTTCCAGAG+TGG 0.675255 6_2:-9655615 Msa0908500:CDS
GGCCTCCCAAAAGGTAACGG+AGG 0.683463 6_2:+9655698 None:intergenic
CTTGTGCCAGTACAGACCAA+GGG 0.693537 6_2:+9655642 None:intergenic
GTGGGCGTTAGAGCATTGAG+AGG 0.697492 6_2:+9656061 None:intergenic
GTGGCGAAGAGCCGACATCG+AGG 0.704477 6_2:-9655938 Msa0908500:CDS
TGTTTCGGCTGTGATACCGG+AGG 0.717886 6_2:-9656251 Msa0908500:CDS
TCAGGTAGACAGTTTCTATG+GGG 0.720720 6_2:+9655671 None:intergenic
GAACATACTACAGCTCCAGG+TGG 0.771466 6_2:-9655957 Msa0908500:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AGTTGAACAATCAAAATAGA+TGG - chr6_2:9655710-9655729 Msa0908500:CDS 25.0%
! AGTTGAACAATCAAAATAGA+TGG - chr6_2:9655710-9655729 Msa0908500:CDS 25.0%
CACCTATCGTTAATGAAAAA+CGG - chr6_2:9655834-9655853 Msa0908500:intron 30.0%
!!! AGTTTTGAGAATTCAAGAGA+AGG + chr6_2:9655875-9655894 None:intergenic 30.0%
AACGGATAAAAGTTACTCTA+GGG + chr6_2:9656323-9656342 None:intergenic 30.0%
CACCTATCGTTAATGAAAAA+CGG - chr6_2:9655834-9655853 Msa0908500:intron 30.0%
!!! AGTTTTGAGAATTCAAGAGA+AGG + chr6_2:9655875-9655894 None:intergenic 30.0%
AACGGATAAAAGTTACTCTA+GGG + chr6_2:9656323-9656342 None:intergenic 30.0%
! CATATTGACTAGTCAATGTC+AGG - chr6_2:9655584-9655603 Msa0908500:CDS 35.0%
!!! AGCCGTTTTTCATTAACGAT+AGG + chr6_2:9655839-9655858 None:intergenic 35.0%
! AAAGTTACTCTAGGGATAAC+AGG + chr6_2:9656315-9656334 None:intergenic 35.0%
CAACGGATAAAAGTTACTCT+AGG + chr6_2:9656324-9656343 None:intergenic 35.0%
! CATATTGACTAGTCAATGTC+AGG - chr6_2:9655584-9655603 Msa0908500:CDS 35.0%
!!! AGCCGTTTTTCATTAACGAT+AGG + chr6_2:9655839-9655858 None:intergenic 35.0%
! AAAGTTACTCTAGGGATAAC+AGG + chr6_2:9656315-9656334 None:intergenic 35.0%
CAACGGATAAAAGTTACTCT+AGG + chr6_2:9656324-9656343 None:intergenic 35.0%
TCGTTCATGGTTCGATATTC+TGG + chr6_2:9655543-9655562 None:intergenic 40.0%
TCGAACCATGAACGAAGTAA+AGG - chr6_2:9655548-9655567 Msa0908500:CDS 40.0%
TCATGCCTTTACTTCGTTCA+TGG + chr6_2:9655556-9655575 None:intergenic 40.0%
TTGAATAGCTAGGGATGGAA+GGG + chr6_2:9655648-9655667 None:intergenic 40.0%
TTCCATCCCTAGCTATTCAA+GGG - chr6_2:9655648-9655667 Msa0908500:CDS 40.0%
ATTGCCTGATCGAATTGATC+AGG - chr6_2:9655735-9655754 Msa0908500:CDS 40.0%
ATGACCTGATCAATTCGATC+AGG + chr6_2:9655742-9655761 None:intergenic 40.0%
GATCAGGTCATGTAAGAACA+AGG - chr6_2:9655751-9655770 Msa0908500:CDS 40.0%
AGAACAAGGTTCAAGTCTAC+CGG - chr6_2:9655765-9655784 Msa0908500:CDS 40.0%
CATTAACGATAGGTGTCAAG+TGG + chr6_2:9655829-9655848 None:intergenic 40.0%
GAGAATTCAAGAGAAGGTCA+CGG + chr6_2:9655869-9655888 None:intergenic 40.0%
!! AATAGGAGAGCACTCATCTT+GGG - chr6_2:9655972-9655991 Msa0908500:CDS 40.0%
TGTAGTATGTTCCAAGGGTT+GGG + chr6_2:9656220-9656239 None:intergenic 40.0%
! AACTTTTATCCGTTGAGCGA+CGG - chr6_2:9656329-9656348 Msa0908500:intron 40.0%
TCAGGTAGACAGTTTCTATG+GGG + chr6_2:9656517-9656536 None:intergenic 40.0%
CTCAGGTAGACAGTTTCTAT+GGG + chr6_2:9656518-9656537 None:intergenic 40.0%
TCTCAGGTAGACAGTTTCTA+TGG + chr6_2:9656519-9656538 None:intergenic 40.0%
TCGTTCATGGTTCGATATTC+TGG + chr6_2:9655543-9655562 None:intergenic 40.0%
TCGAACCATGAACGAAGTAA+AGG - chr6_2:9655548-9655567 Msa0908500:CDS 40.0%
TCATGCCTTTACTTCGTTCA+TGG + chr6_2:9655556-9655575 None:intergenic 40.0%
TTGAATAGCTAGGGATGGAA+GGG + chr6_2:9655648-9655667 None:intergenic 40.0%
TTCCATCCCTAGCTATTCAA+GGG - chr6_2:9655648-9655667 Msa0908500:CDS 40.0%
ATTGCCTGATCGAATTGATC+AGG - chr6_2:9655735-9655754 Msa0908500:CDS 40.0%
ATGACCTGATCAATTCGATC+AGG + chr6_2:9655742-9655761 None:intergenic 40.0%
GATCAGGTCATGTAAGAACA+AGG - chr6_2:9655751-9655770 Msa0908500:CDS 40.0%
AGAACAAGGTTCAAGTCTAC+CGG - chr6_2:9655765-9655784 Msa0908500:CDS 40.0%
CATTAACGATAGGTGTCAAG+TGG + chr6_2:9655829-9655848 None:intergenic 40.0%
GAGAATTCAAGAGAAGGTCA+CGG + chr6_2:9655869-9655888 None:intergenic 40.0%
!! AATAGGAGAGCACTCATCTT+GGG - chr6_2:9655972-9655991 Msa0908500:CDS 40.0%
TGTAGTATGTTCCAAGGGTT+GGG + chr6_2:9656220-9656239 None:intergenic 40.0%
! AACTTTTATCCGTTGAGCGA+CGG - chr6_2:9656329-9656348 Msa0908500:intron 40.0%
TCAGGTAGACAGTTTCTATG+GGG + chr6_2:9656517-9656536 None:intergenic 40.0%
CTCAGGTAGACAGTTTCTAT+GGG + chr6_2:9656518-9656537 None:intergenic 40.0%
TCTCAGGTAGACAGTTTCTA+TGG + chr6_2:9656519-9656538 None:intergenic 40.0%
GTTCGATATTCTGGTGTCCT+AGG + chr6_2:9655534-9655553 None:intergenic 45.0%
GTCAGGTCCTAATTCTTGAC+TGG - chr6_2:9655601-9655620 Msa0908500:CDS 45.0%
GTCCTAATTCTTGACTGGAG+AGG - chr6_2:9655606-9655625 Msa0908500:CDS 45.0%
GTCCTCTCCAGTCAAGAATT+AGG + chr6_2:9655611-9655630 None:intergenic 45.0%
CTTGAATAGCTAGGGATGGA+AGG + chr6_2:9655649-9655668 None:intergenic 45.0%
CTTCCATCCCTAGCTATTCA+AGG - chr6_2:9655647-9655666 Msa0908500:CDS 45.0%
ATCCCTTGAATAGCTAGGGA+TGG + chr6_2:9655653-9655672 None:intergenic 45.0%
ATCCCTAGCTATTCAAGGGA+TGG - chr6_2:9655652-9655671 Msa0908500:CDS 45.0%
TCCCTAGCTATTCAAGGGAT+GGG - chr6_2:9655653-9655672 Msa0908500:CDS 45.0%
TTCAAGTCTACCGGTCTGTT+AGG - chr6_2:9655774-9655793 Msa0908500:intron 45.0%
TGCAGTAATGTATGCAGCTG+AGG + chr6_2:9655803-9655822 None:intergenic 45.0%
!! GAATAGGAGAGCACTCATCT+TGG - chr6_2:9655971-9655990 Msa0908500:CDS 45.0%
!! ATAGGAGAGCACTCATCTTG+GGG - chr6_2:9655973-9655992 Msa0908500:CDS 45.0%
TTTACCGTTGGCACGATAAC+TGG - chr6_2:9656054-9656073 Msa0908500:CDS 45.0%
ATTAAAGCGGTACGTGAGCT+GGG + chr6_2:9656187-9656206 None:intergenic 45.0%
AGCTCACGTACCGCTTTAAT+GGG - chr6_2:9656187-9656206 Msa0908500:intron 45.0%
CTGTAGTATGTTCCAAGGGT+TGG + chr6_2:9656221-9656240 None:intergenic 45.0%
GGAGCTGTAGTATGTTCCAA+GGG + chr6_2:9656225-9656244 None:intergenic 45.0%
TGGAGCTGTAGTATGTTCCA+AGG + chr6_2:9656226-9656245 None:intergenic 45.0%
TTGGAACATACTACAGCTCC+AGG - chr6_2:9656225-9656244 Msa0908500:CDS 45.0%
!! GAATTCTAGCTCTTCCAGAG+TGG - chr6_2:9656570-9656589 Msa0908500:intron 45.0%
ATGAAGCTTCACTGTTCCCT+GGG + chr6_2:9656679-9656698 None:intergenic 45.0%
TATGAAGCTTCACTGTTCCC+TGG + chr6_2:9656680-9656699 None:intergenic 45.0%
GTTCGATATTCTGGTGTCCT+AGG + chr6_2:9655534-9655553 None:intergenic 45.0%
GTCAGGTCCTAATTCTTGAC+TGG - chr6_2:9655601-9655620 Msa0908500:CDS 45.0%
GTCCTAATTCTTGACTGGAG+AGG - chr6_2:9655606-9655625 Msa0908500:CDS 45.0%
GTCCTCTCCAGTCAAGAATT+AGG + chr6_2:9655611-9655630 None:intergenic 45.0%
CTTGAATAGCTAGGGATGGA+AGG + chr6_2:9655649-9655668 None:intergenic 45.0%
CTTCCATCCCTAGCTATTCA+AGG - chr6_2:9655647-9655666 Msa0908500:CDS 45.0%
ATCCCTTGAATAGCTAGGGA+TGG + chr6_2:9655653-9655672 None:intergenic 45.0%
ATCCCTAGCTATTCAAGGGA+TGG - chr6_2:9655652-9655671 Msa0908500:CDS 45.0%
TCCCTAGCTATTCAAGGGAT+GGG - chr6_2:9655653-9655672 Msa0908500:CDS 45.0%
TTCAAGTCTACCGGTCTGTT+AGG - chr6_2:9655774-9655793 Msa0908500:intron 45.0%
TGCAGTAATGTATGCAGCTG+AGG + chr6_2:9655803-9655822 None:intergenic 45.0%
!! GAATAGGAGAGCACTCATCT+TGG - chr6_2:9655971-9655990 Msa0908500:CDS 45.0%
!! ATAGGAGAGCACTCATCTTG+GGG - chr6_2:9655973-9655992 Msa0908500:CDS 45.0%
TTTACCGTTGGCACGATAAC+TGG - chr6_2:9656054-9656073 Msa0908500:CDS 45.0%
ATTAAAGCGGTACGTGAGCT+GGG + chr6_2:9656187-9656206 None:intergenic 45.0%
AGCTCACGTACCGCTTTAAT+GGG - chr6_2:9656187-9656206 Msa0908500:intron 45.0%
CTGTAGTATGTTCCAAGGGT+TGG + chr6_2:9656221-9656240 None:intergenic 45.0%
GGAGCTGTAGTATGTTCCAA+GGG + chr6_2:9656225-9656244 None:intergenic 45.0%
TGGAGCTGTAGTATGTTCCA+AGG + chr6_2:9656226-9656245 None:intergenic 45.0%
TTGGAACATACTACAGCTCC+AGG - chr6_2:9656225-9656244 Msa0908500:CDS 45.0%
!! GAATTCTAGCTCTTCCAGAG+TGG - chr6_2:9656570-9656589 Msa0908500:intron 45.0%
ATGAAGCTTCACTGTTCCCT+GGG + chr6_2:9656679-9656698 None:intergenic 45.0%
TATGAAGCTTCACTGTTCCC+TGG + chr6_2:9656680-9656699 None:intergenic 45.0%
TTGACTGGAGAGGACACCAA+AGG - chr6_2:9655616-9655635 Msa0908500:CDS 50.0%
CCCCATCCCTTGAATAGCTA+GGG + chr6_2:9655657-9655676 None:intergenic 50.0%
CCCTAGCTATTCAAGGGATG+GGG - chr6_2:9655654-9655673 Msa0908500:CDS 50.0%
CCTAGCTATTCAAGGGATGG+GGG - chr6_2:9655655-9655674 Msa0908500:CDS 50.0%
CAGAGAACCCATCGCTGTTT+CGG - chr6_2:9655919-9655938 Msa0908500:CDS 50.0%
ATCACAGCCGAAACAGCGAT+GGG + chr6_2:9655929-9655948 None:intergenic 50.0%
TATCACAGCCGAAACAGCGA+TGG + chr6_2:9655930-9655949 None:intergenic 50.0%
TGTGCCAGTTATCGTGCCAA+CGG + chr6_2:9656061-9656080 None:intergenic 50.0%
TTTCCCTAGTACGAGAGGAC+CGG + chr6_2:9656101-9656120 None:intergenic 50.0%
GAGACAGTTCGGTCCATATC+CGG + chr6_2:9656151-9656170 None:intergenic 50.0%
CAGAACGTCGTGAGACAGTT+CGG + chr6_2:9656162-9656181 None:intergenic 50.0%
CATTAAAGCGGTACGTGAGC+TGG + chr6_2:9656188-9656207 None:intergenic 50.0%
CAGCTCACGTACCGCTTTAA+TGG - chr6_2:9656186-9656205 Msa0908500:intron 50.0%
GAACATACTACAGCTCCAGG+TGG - chr6_2:9656228-9656247 Msa0908500:CDS 50.0%
AAGGTTTGGCACCTCGATGT+CGG + chr6_2:9656261-9656280 None:intergenic 50.0%
GTAGGCCTCCCAAAAGGTAA+CGG + chr6_2:9656493-9656512 None:intergenic 50.0%
AGACAGTTTCTATGGGGCGT+AGG + chr6_2:9656511-9656530 None:intergenic 50.0%
CTTGTGCCAGTACAGACCAA+GGG + chr6_2:9656546-9656565 None:intergenic 50.0%
CCATCAGTGAGATACCACTC+TGG + chr6_2:9656587-9656606 None:intergenic 50.0%
CCAGAGTGGTATCTCACTGA+TGG - chr6_2:9656584-9656603 Msa0908500:intron 50.0%
GCTTAGGTGGAAGGCAAAGA+AGG + chr6_2:9656631-9656650 None:intergenic 50.0%
AAAAGCCCAAAGCCAATCCC+AGG - chr6_2:9656659-9656678 Msa0908500:CDS 50.0%
AAAGCCCAAAGCCAATCCCA+GGG - chr6_2:9656660-9656679 Msa0908500:CDS 50.0%
!! TGTTCCCTGGGATTGGCTTT+GGG + chr6_2:9656667-9656686 None:intergenic 50.0%
TTGACTGGAGAGGACACCAA+AGG - chr6_2:9655616-9655635 Msa0908500:CDS 50.0%
CCCCATCCCTTGAATAGCTA+GGG + chr6_2:9655657-9655676 None:intergenic 50.0%
CCCTAGCTATTCAAGGGATG+GGG - chr6_2:9655654-9655673 Msa0908500:CDS 50.0%
CCTAGCTATTCAAGGGATGG+GGG - chr6_2:9655655-9655674 Msa0908500:CDS 50.0%
CAGAGAACCCATCGCTGTTT+CGG - chr6_2:9655919-9655938 Msa0908500:CDS 50.0%
ATCACAGCCGAAACAGCGAT+GGG + chr6_2:9655929-9655948 None:intergenic 50.0%
TATCACAGCCGAAACAGCGA+TGG + chr6_2:9655930-9655949 None:intergenic 50.0%
TGTGCCAGTTATCGTGCCAA+CGG + chr6_2:9656061-9656080 None:intergenic 50.0%
TTTCCCTAGTACGAGAGGAC+CGG + chr6_2:9656101-9656120 None:intergenic 50.0%
GAGACAGTTCGGTCCATATC+CGG + chr6_2:9656151-9656170 None:intergenic 50.0%
CAGAACGTCGTGAGACAGTT+CGG + chr6_2:9656162-9656181 None:intergenic 50.0%
CATTAAAGCGGTACGTGAGC+TGG + chr6_2:9656188-9656207 None:intergenic 50.0%
CAGCTCACGTACCGCTTTAA+TGG - chr6_2:9656186-9656205 Msa0908500:intron 50.0%
GAACATACTACAGCTCCAGG+TGG - chr6_2:9656228-9656247 Msa0908500:CDS 50.0%
AAGGTTTGGCACCTCGATGT+CGG + chr6_2:9656261-9656280 None:intergenic 50.0%
GTAGGCCTCCCAAAAGGTAA+CGG + chr6_2:9656493-9656512 None:intergenic 50.0%
AGACAGTTTCTATGGGGCGT+AGG + chr6_2:9656511-9656530 None:intergenic 50.0%
CTTGTGCCAGTACAGACCAA+GGG + chr6_2:9656546-9656565 None:intergenic 50.0%
CCATCAGTGAGATACCACTC+TGG + chr6_2:9656587-9656606 None:intergenic 50.0%
CCAGAGTGGTATCTCACTGA+TGG - chr6_2:9656584-9656603 Msa0908500:intron 50.0%
GCTTAGGTGGAAGGCAAAGA+AGG + chr6_2:9656631-9656650 None:intergenic 50.0%
AAAAGCCCAAAGCCAATCCC+AGG - chr6_2:9656659-9656678 Msa0908500:CDS 50.0%
AAAGCCCAAAGCCAATCCCA+GGG - chr6_2:9656660-9656679 Msa0908500:CDS 50.0%
!! TGTTCCCTGGGATTGGCTTT+GGG + chr6_2:9656667-9656686 None:intergenic 50.0%
TTCTGGTGTCCTAGGCGTAG+AGG + chr6_2:9655526-9655545 None:intergenic 55.0%
CCCCCATCCCTTGAATAGCT+AGG + chr6_2:9655658-9655677 None:intergenic 55.0%
ATTCAAGGGATGGGGGACAG+AGG - chr6_2:9655662-9655681 Msa0908500:CDS 55.0%
! GCTGAGGCATCCTAACAGAC+CGG + chr6_2:9655787-9655806 None:intergenic 55.0%
! TTCTTTTGCTCCATCCCCGC+AGG - chr6_2:9655894-9655913 Msa0908500:CDS 55.0%
! TCTTTTGCTCCATCCCCGCA+GGG - chr6_2:9655895-9655914 Msa0908500:CDS 55.0%
! CGCTGTTTCGGCTGTGATAC+CGG - chr6_2:9655931-9655950 Msa0908500:CDS 55.0%
TGTTTCGGCTGTGATACCGG+AGG - chr6_2:9655934-9655953 Msa0908500:CDS 55.0%
!! GAGAGCACTCATCTTGGGGT+GGG - chr6_2:9655977-9655996 Msa0908500:CDS 55.0%
AAACGCTGGGTAGCCAAGTG+CGG + chr6_2:9656037-9656056 None:intergenic 55.0%
TCGTGCCAACGGTAAACGCT+GGG + chr6_2:9656050-9656069 None:intergenic 55.0%
ATCGTGCCAACGGTAAACGC+TGG + chr6_2:9656051-9656070 None:intergenic 55.0%
CACGATAACTGGCACACCAG+AGG - chr6_2:9656065-9656084 Msa0908500:CDS 55.0%
TTCCCGGTCCTCTCGTACTA+GGG - chr6_2:9656095-9656114 Msa0908500:intron 55.0%
TTCCCTAGTACGAGAGGACC+GGG + chr6_2:9656100-9656119 None:intergenic 55.0%
GGTCCTCTCGTACTAGGGAA+AGG - chr6_2:9656100-9656119 Msa0908500:intron 55.0%
GGACCTTTCCCTAGTACGAG+AGG + chr6_2:9656106-9656125 None:intergenic 55.0%
!! GTGGGCGTTAGAGCATTGAG+AGG + chr6_2:9656127-9656146 None:intergenic 55.0%
CAATGCTCTAACGCCCACAC+CGG - chr6_2:9656129-9656148 Msa0908500:intron 55.0%
TCTAACGCCCACACCGGATA+TGG - chr6_2:9656135-9656154 Msa0908500:intron 55.0%
GTTCGGTCCATATCCGGTGT+GGG + chr6_2:9656145-9656164 None:intergenic 55.0%
AGTTCGGTCCATATCCGGTG+TGG + chr6_2:9656146-9656165 None:intergenic 55.0%
GGGCTGTTCGCCCATTAAAG+CGG + chr6_2:9656200-9656219 None:intergenic 55.0%
CTCACATCGACGGGAAGGTT+TGG + chr6_2:9656275-9656294 None:intergenic 55.0%
AAGAGCTCACATCGACGGGA+AGG + chr6_2:9656280-9656299 None:intergenic 55.0%
TTCCCGTCGATGTGAGCTCT+TGG - chr6_2:9656279-9656298 Msa0908500:intron 55.0%
TCCCGTCGATGTGAGCTCTT+GGG - chr6_2:9656280-9656299 Msa0908500:intron 55.0%
TCCCCAAGAGCTCACATCGA+CGG + chr6_2:9656285-9656304 None:intergenic 55.0%
AGTCGGCCTTAGTGATCCGA+CGG + chr6_2:9656370-9656389 None:intergenic 55.0%
CCTCGAGTGCAAAGGCAGAA+GGG + chr6_2:9656431-9656450 None:intergenic 55.0%
CCTTCTGCCTTTGCACTCGA+GGG - chr6_2:9656429-9656448 Msa0908500:intron 55.0%
! AGATTGGCCCTCGAGTGCAA+AGG + chr6_2:9656439-9656458 None:intergenic 55.0%
AAAGGTTTCCTCGGGCCAGA+CGG + chr6_2:9656462-9656481 None:intergenic 55.0%
AGGCGTGCAAAGGTTTCCTC+GGG + chr6_2:9656470-9656489 None:intergenic 55.0%
GAGGCGTGCAAAGGTTTCCT+CGG + chr6_2:9656471-9656490 None:intergenic 55.0%
!! AAGGTAACGGAGGCGTGCAA+AGG + chr6_2:9656480-9656499 None:intergenic 55.0%
! TGCACGCCTCCGTTACCTTT+TGG - chr6_2:9656481-9656500 Msa0908500:CDS 55.0%
! GCACGCCTCCGTTACCTTTT+GGG - chr6_2:9656482-9656501 Msa0908500:CDS 55.0%
GTCTACCTGAGACTGTCCCT+TGG - chr6_2:9656527-9656546 Msa0908500:intron 55.0%
ACAGACCAAGGGACAGTCTC+AGG + chr6_2:9656535-9656554 None:intergenic 55.0%
GACTGTCCCTTGGTCTGTAC+TGG - chr6_2:9656537-9656556 Msa0908500:intron 55.0%
CCTTGTGCCAGTACAGACCA+AGG + chr6_2:9656547-9656566 None:intergenic 55.0%
! CCTTGGTCTGTACTGGCACA+AGG - chr6_2:9656544-9656563 Msa0908500:intron 55.0%
AGGCAAAGAAGGCCTCCTTC+CGG + chr6_2:9656620-9656639 None:intergenic 55.0%
! CTTTTCCTGCGCAGCTTAGG+TGG + chr6_2:9656644-9656663 None:intergenic 55.0%
!! CTGTTCCCTGGGATTGGCTT+TGG + chr6_2:9656668-9656687 None:intergenic 55.0%
GCTTCACTGTTCCCTGGGAT+TGG + chr6_2:9656674-9656693 None:intergenic 55.0%
TTCTGGTGTCCTAGGCGTAG+AGG + chr6_2:9655526-9655545 None:intergenic 55.0%
CCCCCATCCCTTGAATAGCT+AGG + chr6_2:9655658-9655677 None:intergenic 55.0%
ATTCAAGGGATGGGGGACAG+AGG - chr6_2:9655662-9655681 Msa0908500:CDS 55.0%
! GCTGAGGCATCCTAACAGAC+CGG + chr6_2:9655787-9655806 None:intergenic 55.0%
! TTCTTTTGCTCCATCCCCGC+AGG - chr6_2:9655894-9655913 Msa0908500:CDS 55.0%
! TCTTTTGCTCCATCCCCGCA+GGG - chr6_2:9655895-9655914 Msa0908500:CDS 55.0%
! CGCTGTTTCGGCTGTGATAC+CGG - chr6_2:9655931-9655950 Msa0908500:CDS 55.0%
TGTTTCGGCTGTGATACCGG+AGG - chr6_2:9655934-9655953 Msa0908500:CDS 55.0%
!! GAGAGCACTCATCTTGGGGT+GGG - chr6_2:9655977-9655996 Msa0908500:CDS 55.0%
AAACGCTGGGTAGCCAAGTG+CGG + chr6_2:9656037-9656056 None:intergenic 55.0%
TCGTGCCAACGGTAAACGCT+GGG + chr6_2:9656050-9656069 None:intergenic 55.0%
ATCGTGCCAACGGTAAACGC+TGG + chr6_2:9656051-9656070 None:intergenic 55.0%
CACGATAACTGGCACACCAG+AGG - chr6_2:9656065-9656084 Msa0908500:CDS 55.0%
TTCCCGGTCCTCTCGTACTA+GGG - chr6_2:9656095-9656114 Msa0908500:intron 55.0%
TTCCCTAGTACGAGAGGACC+GGG + chr6_2:9656100-9656119 None:intergenic 55.0%
GGTCCTCTCGTACTAGGGAA+AGG - chr6_2:9656100-9656119 Msa0908500:intron 55.0%
GGACCTTTCCCTAGTACGAG+AGG + chr6_2:9656106-9656125 None:intergenic 55.0%
!! GTGGGCGTTAGAGCATTGAG+AGG + chr6_2:9656127-9656146 None:intergenic 55.0%
CAATGCTCTAACGCCCACAC+CGG - chr6_2:9656129-9656148 Msa0908500:intron 55.0%
TCTAACGCCCACACCGGATA+TGG - chr6_2:9656135-9656154 Msa0908500:intron 55.0%
GTTCGGTCCATATCCGGTGT+GGG + chr6_2:9656145-9656164 None:intergenic 55.0%
AGTTCGGTCCATATCCGGTG+TGG + chr6_2:9656146-9656165 None:intergenic 55.0%
GGGCTGTTCGCCCATTAAAG+CGG + chr6_2:9656200-9656219 None:intergenic 55.0%
CTCACATCGACGGGAAGGTT+TGG + chr6_2:9656275-9656294 None:intergenic 55.0%
AAGAGCTCACATCGACGGGA+AGG + chr6_2:9656280-9656299 None:intergenic 55.0%
TTCCCGTCGATGTGAGCTCT+TGG - chr6_2:9656279-9656298 Msa0908500:intron 55.0%
TCCCGTCGATGTGAGCTCTT+GGG - chr6_2:9656280-9656299 Msa0908500:intron 55.0%
TCCCCAAGAGCTCACATCGA+CGG + chr6_2:9656285-9656304 None:intergenic 55.0%
AGTCGGCCTTAGTGATCCGA+CGG + chr6_2:9656370-9656389 None:intergenic 55.0%
CCTCGAGTGCAAAGGCAGAA+GGG + chr6_2:9656431-9656450 None:intergenic 55.0%
CCTTCTGCCTTTGCACTCGA+GGG - chr6_2:9656429-9656448 Msa0908500:intron 55.0%
! AGATTGGCCCTCGAGTGCAA+AGG + chr6_2:9656439-9656458 None:intergenic 55.0%
AAAGGTTTCCTCGGGCCAGA+CGG + chr6_2:9656462-9656481 None:intergenic 55.0%
AGGCGTGCAAAGGTTTCCTC+GGG + chr6_2:9656470-9656489 None:intergenic 55.0%
GAGGCGTGCAAAGGTTTCCT+CGG + chr6_2:9656471-9656490 None:intergenic 55.0%
!! AAGGTAACGGAGGCGTGCAA+AGG + chr6_2:9656480-9656499 None:intergenic 55.0%
! TGCACGCCTCCGTTACCTTT+TGG - chr6_2:9656481-9656500 Msa0908500:CDS 55.0%
! GCACGCCTCCGTTACCTTTT+GGG - chr6_2:9656482-9656501 Msa0908500:CDS 55.0%
GTCTACCTGAGACTGTCCCT+TGG - chr6_2:9656527-9656546 Msa0908500:intron 55.0%
ACAGACCAAGGGACAGTCTC+AGG + chr6_2:9656535-9656554 None:intergenic 55.0%
GACTGTCCCTTGGTCTGTAC+TGG - chr6_2:9656537-9656556 Msa0908500:intron 55.0%
CCTTGTGCCAGTACAGACCA+AGG + chr6_2:9656547-9656566 None:intergenic 55.0%
! CCTTGGTCTGTACTGGCACA+AGG - chr6_2:9656544-9656563 Msa0908500:intron 55.0%
AGGCAAAGAAGGCCTCCTTC+CGG + chr6_2:9656620-9656639 None:intergenic 55.0%
! CTTTTCCTGCGCAGCTTAGG+TGG + chr6_2:9656644-9656663 None:intergenic 55.0%
!! CTGTTCCCTGGGATTGGCTT+TGG + chr6_2:9656668-9656687 None:intergenic 55.0%
GCTTCACTGTTCCCTGGGAT+TGG + chr6_2:9656674-9656693 None:intergenic 55.0%
GGTGTGGTTCCTCTACGCCT+AGG - chr6_2:9655514-9655533 Msa0908500:CDS 60.0%
GATGGAAGGGCAGAGGCCTT+TGG + chr6_2:9655635-9655654 None:intergenic 60.0%
AGCTAGGGATGGAAGGGCAG+AGG + chr6_2:9655642-9655661 None:intergenic 60.0%
! GGGATGGGGGACAGAGGTTT+TGG - chr6_2:9655668-9655687 Msa0908500:CDS 60.0%
! CTTTTGCTCCATCCCCGCAG+GGG - chr6_2:9655896-9655915 Msa0908500:CDS 60.0%
GCTGTGATACCGGAGGCTCT+GGG - chr6_2:9655941-9655960 Msa0908500:CDS 60.0%
CTGTGATACCGGAGGCTCTG+GGG - chr6_2:9655942-9655961 Msa0908500:CDS 60.0%
!! GGCTCTGGGGAAGTCGGAAT+AGG - chr6_2:9655955-9655974 Msa0908500:CDS 60.0%
!! GGAGAGCACTCATCTTGGGG+TGG - chr6_2:9655976-9655995 Msa0908500:CDS 60.0%
GCAGTTATCCGCTCCGCACT+TGG - chr6_2:9656021-9656040 Msa0908500:CDS 60.0%
GGCTACCCAGCGTTTACCGT+TGG - chr6_2:9656042-9656061 Msa0908500:CDS 60.0%
CTAGTACGAGAGGACCGGGA+AGG + chr6_2:9656096-9656115 None:intergenic 60.0%
CTTCCCGGTCCTCTCGTACT+AGG - chr6_2:9656094-9656113 Msa0908500:intron 60.0%
CCCCAAGAGCTCACATCGAC+GGG + chr6_2:9656284-9656303 None:intergenic 60.0%
CCCGTCGATGTGAGCTCTTG+GGG - chr6_2:9656281-9656300 Msa0908500:intron 60.0%
TCGGCACCGTCGGATCACTA+AGG - chr6_2:9656361-9656380 Msa0908500:intron 60.0%
CGTCGAGCAGGGACGAAAGT+CGG + chr6_2:9656387-9656406 None:intergenic 60.0%
CGACTTTCGTCCCTGCTCGA+CGG - chr6_2:9656385-9656404 Msa0908500:intron 60.0%
GACTTTCGTCCCTGCTCGAC+GGG - chr6_2:9656386-9656405 Msa0908500:intron 60.0%
CCCTTCTGCCTTTGCACTCG+AGG - chr6_2:9656428-9656447 Msa0908500:intron 60.0%
CCCTCGAGTGCAAAGGCAGA+AGG + chr6_2:9656432-9656451 None:intergenic 60.0%
! CGCCTCCGTTACCTTTTGGG+AGG - chr6_2:9656485-9656504 Msa0908500:CDS 60.0%
! GGCCTCCCAAAAGGTAACGG+AGG + chr6_2:9656490-9656509 None:intergenic 60.0%
AAAGAAGGCCTCCTTCCGGG+GGG + chr6_2:9656616-9656635 None:intergenic 60.0%
CAAAGAAGGCCTCCTTCCGG+GGG + chr6_2:9656617-9656636 None:intergenic 60.0%
GCAAAGAAGGCCTCCTTCCG+GGG + chr6_2:9656618-9656637 None:intergenic 60.0%
GGCAAAGAAGGCCTCCTTCC+GGG + chr6_2:9656619-9656638 None:intergenic 60.0%
TCCTGCGCAGCTTAGGTGGA+AGG + chr6_2:9656640-9656659 None:intergenic 60.0%
! GGGCTTTTCCTGCGCAGCTT+AGG + chr6_2:9656647-9656666 None:intergenic 60.0%
GGTGTGGTTCCTCTACGCCT+AGG - chr6_2:9655514-9655533 Msa0908500:CDS 60.0%
GATGGAAGGGCAGAGGCCTT+TGG + chr6_2:9655635-9655654 None:intergenic 60.0%
AGCTAGGGATGGAAGGGCAG+AGG + chr6_2:9655642-9655661 None:intergenic 60.0%
! GGGATGGGGGACAGAGGTTT+TGG - chr6_2:9655668-9655687 Msa0908500:CDS 60.0%
! CTTTTGCTCCATCCCCGCAG+GGG - chr6_2:9655896-9655915 Msa0908500:CDS 60.0%
GCTGTGATACCGGAGGCTCT+GGG - chr6_2:9655941-9655960 Msa0908500:CDS 60.0%
CTGTGATACCGGAGGCTCTG+GGG - chr6_2:9655942-9655961 Msa0908500:CDS 60.0%
!! GGCTCTGGGGAAGTCGGAAT+AGG - chr6_2:9655955-9655974 Msa0908500:CDS 60.0%
!! GGAGAGCACTCATCTTGGGG+TGG - chr6_2:9655976-9655995 Msa0908500:CDS 60.0%
GCAGTTATCCGCTCCGCACT+TGG - chr6_2:9656021-9656040 Msa0908500:CDS 60.0%
GGCTACCCAGCGTTTACCGT+TGG - chr6_2:9656042-9656061 Msa0908500:CDS 60.0%
CTAGTACGAGAGGACCGGGA+AGG + chr6_2:9656096-9656115 None:intergenic 60.0%
CTTCCCGGTCCTCTCGTACT+AGG - chr6_2:9656094-9656113 Msa0908500:intron 60.0%
CCCCAAGAGCTCACATCGAC+GGG + chr6_2:9656284-9656303 None:intergenic 60.0%
CCCGTCGATGTGAGCTCTTG+GGG - chr6_2:9656281-9656300 Msa0908500:intron 60.0%
TCGGCACCGTCGGATCACTA+AGG - chr6_2:9656361-9656380 Msa0908500:intron 60.0%
CGTCGAGCAGGGACGAAAGT+CGG + chr6_2:9656387-9656406 None:intergenic 60.0%
CGACTTTCGTCCCTGCTCGA+CGG - chr6_2:9656385-9656404 Msa0908500:intron 60.0%
GACTTTCGTCCCTGCTCGAC+GGG - chr6_2:9656386-9656405 Msa0908500:intron 60.0%
CCCTTCTGCCTTTGCACTCG+AGG - chr6_2:9656428-9656447 Msa0908500:intron 60.0%
CCCTCGAGTGCAAAGGCAGA+AGG + chr6_2:9656432-9656451 None:intergenic 60.0%
! CGCCTCCGTTACCTTTTGGG+AGG - chr6_2:9656485-9656504 Msa0908500:CDS 60.0%
! GGCCTCCCAAAAGGTAACGG+AGG + chr6_2:9656490-9656509 None:intergenic 60.0%
AAAGAAGGCCTCCTTCCGGG+GGG + chr6_2:9656616-9656635 None:intergenic 60.0%
CAAAGAAGGCCTCCTTCCGG+GGG + chr6_2:9656617-9656636 None:intergenic 60.0%
GCAAAGAAGGCCTCCTTCCG+GGG + chr6_2:9656618-9656637 None:intergenic 60.0%
GGCAAAGAAGGCCTCCTTCC+GGG + chr6_2:9656619-9656638 None:intergenic 60.0%
TCCTGCGCAGCTTAGGTGGA+AGG + chr6_2:9656640-9656659 None:intergenic 60.0%
! GGGCTTTTCCTGCGCAGCTT+AGG + chr6_2:9656647-9656666 None:intergenic 60.0%
ATGGGTTCTCTGCCCCTGCG+GGG + chr6_2:9655911-9655930 None:intergenic 65.0%
! GATGGGTTCTCTGCCCCTGC+GGG + chr6_2:9655912-9655931 None:intergenic 65.0%
! CGATGGGTTCTCTGCCCCTG+CGG + chr6_2:9655913-9655932 None:intergenic 65.0%
GGCTGTGATACCGGAGGCTC+TGG - chr6_2:9655940-9655959 Msa0908500:CDS 65.0%
!! ACCGGAGGCTCTGGGGAAGT+CGG - chr6_2:9655949-9655968 Msa0908500:CDS 65.0%
TCCGACTTCCCCAGAGCCTC+CGG + chr6_2:9655953-9655972 None:intergenic 65.0%
CTGGGTAGCCAAGTGCGGAG+CGG + chr6_2:9656032-9656051 None:intergenic 65.0%
! CACCAGAGGTGCGTCCTTCC+CGG - chr6_2:9656079-9656098 Msa0908500:intron 65.0%
TGGGCGAACAGCCCAACCCT+TGG - chr6_2:9656206-9656225 Msa0908500:intron 65.0%
!! GATGTCGGCTCTTCGCCACC+TGG + chr6_2:9656246-9656265 None:intergenic 65.0%
GTGGCGAAGAGCCGACATCG+AGG - chr6_2:9656247-9656266 Msa0908500:CDS 65.0%
GTGGAAGGGCCGTCGCTCAA+CGG + chr6_2:9656341-9656360 None:intergenic 65.0%
TGAGCGACGGCCCTTCCACT+CGG - chr6_2:9656342-9656361 Msa0908500:intron 65.0%
! TCCGACGGTGCCGAGTGGAA+GGG + chr6_2:9656355-9656374 None:intergenic 65.0%
! ATCCGACGGTGCCGAGTGGA+AGG + chr6_2:9656356-9656375 None:intergenic 65.0%
! AGTGATCCGACGGTGCCGAG+TGG + chr6_2:9656360-9656379 None:intergenic 65.0%
TTTCGTCCCTGCTCGACGGG+TGG - chr6_2:9656389-9656408 Msa0908500:intron 65.0%
TTCGTCCCTGCTCGACGGGT+GGG - chr6_2:9656390-9656409 Msa0908500:intron 65.0%
CAAGACCCACCCGTCGAGCA+GGG + chr6_2:9656398-9656417 None:intergenic 65.0%
CTCGAGGGCCAATCTCCGTC+TGG - chr6_2:9656444-9656463 Msa0908500:intron 65.0%
TCCTCGGGCCAGACGGAGAT+TGG + chr6_2:9656455-9656474 None:intergenic 65.0%
TGGGGCGTAGGCCTCCCAAA+AGG + chr6_2:9656499-9656518 None:intergenic 65.0%
GCCTTCCACCTAAGCTGCGC+AGG - chr6_2:9656636-9656655 Msa0908500:intron 65.0%
ATGGGTTCTCTGCCCCTGCG+GGG + chr6_2:9655911-9655930 None:intergenic 65.0%
! GATGGGTTCTCTGCCCCTGC+GGG + chr6_2:9655912-9655931 None:intergenic 65.0%
! CGATGGGTTCTCTGCCCCTG+CGG + chr6_2:9655913-9655932 None:intergenic 65.0%
GGCTGTGATACCGGAGGCTC+TGG - chr6_2:9655940-9655959 Msa0908500:CDS 65.0%
!! ACCGGAGGCTCTGGGGAAGT+CGG - chr6_2:9655949-9655968 Msa0908500:CDS 65.0%
TCCGACTTCCCCAGAGCCTC+CGG + chr6_2:9655953-9655972 None:intergenic 65.0%
CTGGGTAGCCAAGTGCGGAG+CGG + chr6_2:9656032-9656051 None:intergenic 65.0%
! CACCAGAGGTGCGTCCTTCC+CGG - chr6_2:9656079-9656098 Msa0908500:intron 65.0%
TGGGCGAACAGCCCAACCCT+TGG - chr6_2:9656206-9656225 Msa0908500:intron 65.0%
!! GATGTCGGCTCTTCGCCACC+TGG + chr6_2:9656246-9656265 None:intergenic 65.0%
GTGGCGAAGAGCCGACATCG+AGG - chr6_2:9656247-9656266 Msa0908500:CDS 65.0%
GTGGAAGGGCCGTCGCTCAA+CGG + chr6_2:9656341-9656360 None:intergenic 65.0%
TGAGCGACGGCCCTTCCACT+CGG - chr6_2:9656342-9656361 Msa0908500:intron 65.0%
! TCCGACGGTGCCGAGTGGAA+GGG + chr6_2:9656355-9656374 None:intergenic 65.0%
! ATCCGACGGTGCCGAGTGGA+AGG + chr6_2:9656356-9656375 None:intergenic 65.0%
! AGTGATCCGACGGTGCCGAG+TGG + chr6_2:9656360-9656379 None:intergenic 65.0%
TTTCGTCCCTGCTCGACGGG+TGG - chr6_2:9656389-9656408 Msa0908500:intron 65.0%
TTCGTCCCTGCTCGACGGGT+GGG - chr6_2:9656390-9656409 Msa0908500:intron 65.0%
CAAGACCCACCCGTCGAGCA+GGG + chr6_2:9656398-9656417 None:intergenic 65.0%
CTCGAGGGCCAATCTCCGTC+TGG - chr6_2:9656444-9656463 Msa0908500:intron 65.0%
TCCTCGGGCCAGACGGAGAT+TGG + chr6_2:9656455-9656474 None:intergenic 65.0%
TGGGGCGTAGGCCTCCCAAA+AGG + chr6_2:9656499-9656518 None:intergenic 65.0%
GCCTTCCACCTAAGCTGCGC+AGG - chr6_2:9656636-9656655 Msa0908500:intron 65.0%
GTTCTCTGCCCCTGCGGGGA+TGG + chr6_2:9655907-9655926 None:intergenic 70.0%
GACCGGGAAGGACGCACCTC+TGG + chr6_2:9656084-9656103 None:intergenic 70.0%
GCCCTTCCACTCGGCACCGT+CGG - chr6_2:9656351-9656370 Msa0908500:intron 70.0%
GCAAGACCCACCCGTCGAGC+AGG + chr6_2:9656399-9656418 None:intergenic 70.0%
GCCAATCTCCGTCTGGCCCG+AGG - chr6_2:9656451-9656470 Msa0908500:CDS 70.0%
CACTGATGGCTCGAGCCCCC+CGG - chr6_2:9656598-9656617 Msa0908500:intron 70.0%
GTTCTCTGCCCCTGCGGGGA+TGG + chr6_2:9655907-9655926 None:intergenic 70.0%
GACCGGGAAGGACGCACCTC+TGG + chr6_2:9656084-9656103 None:intergenic 70.0%
GCCCTTCCACTCGGCACCGT+CGG - chr6_2:9656351-9656370 Msa0908500:intron 70.0%
GCAAGACCCACCCGTCGAGC+AGG + chr6_2:9656399-9656418 None:intergenic 70.0%
GCCAATCTCCGTCTGGCCCG+AGG - chr6_2:9656451-9656470 Msa0908500:CDS 70.0%
CACTGATGGCTCGAGCCCCC+CGG - chr6_2:9656598-9656617 Msa0908500:intron 70.0%
GATGGCTCGAGCCCCCCGGA+AGG - chr6_2:9656602-9656621 Msa0908500:intron 75.0%
GATGGCTCGAGCCCCCCGGA+AGG - chr6_2:9656602-9656621 Msa0908500:intron 75.0%
! GGCTCGAGCCCCCCGGAAGG+AGG - chr6_2:9656605-9656624 Msa0908500:intron 80.0%
! GGCTCGAGCCCCCCGGAAGG+AGG - chr6_2:9656605-9656624 Msa0908500:intron 80.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 9655507 9656700 9655507 ID=Msa0908500;Name=Msa0908500
chr6_2 mRNA 9655507 9656700 9655507 ID=Msa0908500-mRNA-1;Parent=Msa0908500;Name=Msa0908500-mRNA-1;_AED=0.59;_eAED=0.71;_QI=0|0|0|0.4|1|1|5|0|233
chr6_2 exon 9656644 9656700 9656644 ID=Msa0908500-mRNA-1:exon:2359;Parent=Msa0908500-mRNA-1
chr6_2 exon 9656451 9656525 9656451 ID=Msa0908500-mRNA-1:exon:2358;Parent=Msa0908500-mRNA-1
chr6_2 exon 9656213 9656291 9656213 ID=Msa0908500-mRNA-1:exon:2357;Parent=Msa0908500-mRNA-1
chr6_2 exon 9655881 9656091 9655881 ID=Msa0908500-mRNA-1:exon:2356;Parent=Msa0908500-mRNA-1
chr6_2 exon 9655507 9655786 9655507 ID=Msa0908500-mRNA-1:exon:2355;Parent=Msa0908500-mRNA-1
chr6_2 CDS 9656644 9656700 9656644 ID=Msa0908500-mRNA-1:cds;Parent=Msa0908500-mRNA-1
chr6_2 CDS 9656451 9656525 9656451 ID=Msa0908500-mRNA-1:cds;Parent=Msa0908500-mRNA-1
chr6_2 CDS 9656213 9656291 9656213 ID=Msa0908500-mRNA-1:cds;Parent=Msa0908500-mRNA-1
chr6_2 CDS 9655881 9656091 9655881 ID=Msa0908500-mRNA-1:cds;Parent=Msa0908500-mRNA-1
chr6_2 CDS 9655507 9655786 9655507 ID=Msa0908500-mRNA-1:cds;Parent=Msa0908500-mRNA-1
Gene Sequence

>Msa0908500

ATGGATTGGTGTGGTTCCTCTACGCCTAGGACACCAGAATATCGAACCATGAACGAAAGGTTTTGGTTTTTTCATGTTGTCAAAGAGTTGAACAATCAAAATAGATGGCGATTGCCTGATCGAATTGATCAGGGGCAGAGAACCCATCGCTGTTTCGGCTGTGATACCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCTCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATGTGAGCTCTTGGGGAAGATCAGCCTGTTATCCCTAGATCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTACGCCCCATAGAAACTGTCTACCTGAGACTGTCCCTTGGTCTGTACTGGCACAAGGTTAGAATTCTAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGAGCCCCCCGGAAGGAGGCCTTCTTTGCCTTCCACCTAAGCTGCGCAGGAAAAGCCCAAAGCCAATCCCAGGGAACAGTGAAGCTTCATAG

Protein sequence

>Msa0908500

MDWCGSSTPRTPEYRTMNERFWFFHVVKELNNQNRWRLPDRIDQGQRTHRCFGCDTGGSGEVGIGEHSSWGKGPLNALTPTPDMDRTVSRRSEPSSRTALMGEQPNPWNILQLQVAKSRHRGAKPSRRCELLGKISLLSLDQAPFCLCTRGPISVWPEETFARLRYLLGGLRPIETVYLRLSLGLYWHKVRILALPEWYLTDGSSPPEGGLLCLPPKLRRKSPKPIPGNSEAS*