AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1162330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1162330 MtrunA17_Chr7g0258161 97.353 340 9 0 1 340 1 340 0.0 687
Msa1162330 MtrunA17_Chr1g0174161 68.103 348 81 8 1 340 1 326 6.20e-146 414
Msa1162330 MtrunA17_Chr7g0234761 47.343 207 77 6 129 319 259 449 1.18e-46 165
Msa1162330 MtrunA17_Chr4g0035101 61.417 127 45 1 132 258 106 228 1.09e-43 153
Msa1162330 MtrunA17_Chr3g0144641 57.037 135 49 2 130 255 139 273 3.61e-43 153
Msa1162330 MtrunA17_Chr1g0152131 62.185 119 44 1 140 258 228 345 1.12e-42 152
Msa1162330 MtrunA17_Chr5g0421111 53.947 152 67 3 108 258 301 450 1.69e-42 154
Msa1162330 MtrunA17_Chr8g0365941 52.597 154 66 3 108 258 241 390 5.59e-41 149
Msa1162330 MtrunA17_Chr8g0363921 59.016 122 46 1 131 252 113 230 7.29e-39 139
Msa1162330 MtrunA17_Chr8g0339091 54.331 127 56 2 132 257 250 375 1.14e-38 143
Msa1162330 MtrunA17_Chr8g0385911 70.833 96 23 3 166 256 136 231 8.54e-38 137
Msa1162330 MtrunA17_Chr5g0415291 66.990 103 30 2 145 246 86 185 3.60e-36 130
Msa1162330 MtrunA17_Chr3g0131771 70.000 90 24 1 170 256 144 233 9.90e-36 132
Msa1162330 MtrunA17_Chr6g0484271 56.604 106 45 1 145 250 128 232 4.72e-31 118
Msa1162330 MtrunA17_Chr4g0074161 61.429 70 26 1 169 238 202 270 1.00e-17 83.6
Msa1162330 MtrunA17_Chr1g0190731 60.606 66 25 1 173 238 193 257 2.17e-16 79.3
Msa1162330 MtrunA17_Chr1g0193321 36.842 114 67 3 135 247 426 535 5.44e-14 73.2
Msa1162330 MtrunA17_Chr4g0014771 50.769 65 32 0 173 237 118 182 5.84e-13 67.0
Msa1162330 MtrunA17_Chr1g0182791 46.377 69 36 1 175 243 319 386 1.45e-12 68.6
Msa1162330 MtrunA17_Chr7g0258181 43.243 74 42 0 173 246 243 316 2.76e-12 66.6
Msa1162330 MtrunA17_Chr1g0174271 47.826 69 36 0 173 241 298 366 3.05e-12 67.0
Msa1162330 MtrunA17_Chr4g0032951 49.231 65 33 0 173 237 355 419 3.78e-12 67.0
Msa1162330 MtrunA17_Chr8g0351881 46.154 65 35 0 173 237 316 380 6.25e-12 66.2
Msa1162330 MtrunA17_Chr2g0329041 41.096 73 43 0 173 245 332 404 1.94e-11 64.7
Msa1162330 MtrunA17_Chr1g0184841 57.576 66 27 1 173 238 120 184 2.73e-11 63.5
Msa1162330 MtrunA17_Chr3g0134741 37.190 121 59 5 143 256 208 318 6.08e-11 62.8
Msa1162330 MtrunA17_Chr1g0152651 46.154 65 34 1 173 237 274 337 8.28e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1162330 AT3G57800.2 50.815 368 127 11 15 340 24 379 8.06e-97 292
Msa1162330 AT2G42300.1 47.802 364 120 9 3 340 8 327 9.36e-92 277
Msa1162330 AT3G57800.1 45.060 415 127 12 15 340 24 426 2.80e-87 269
Msa1162330 AT2G42300.4 50.704 284 95 7 3 260 8 272 1.68e-73 229
Msa1162330 AT3G07340.2 41.538 260 100 8 78 311 140 373 4.99e-48 167
Msa1162330 AT3G07340.1 41.538 260 100 8 78 311 140 373 7.97e-48 167
Msa1162330 AT1G26260.4 40.948 232 91 5 73 258 77 308 4.37e-44 156
Msa1162330 AT1G26260.1 40.948 232 91 5 73 258 77 308 4.37e-44 156
Msa1162330 AT1G26260.6 40.948 232 91 5 73 258 77 308 4.37e-44 156
Msa1162330 AT1G26260.2 40.948 232 91 5 73 258 77 308 4.37e-44 156
Msa1162330 AT1G68920.3 49.390 164 77 2 121 281 253 413 5.41e-43 155
Msa1162330 AT1G68920.1 49.390 164 77 2 121 281 254 414 5.61e-43 155
Msa1162330 AT1G68920.4 49.390 164 77 2 121 281 254 414 5.61e-43 155
Msa1162330 AT1G68920.2 49.390 164 77 2 121 281 254 414 5.61e-43 155
Msa1162330 AT1G10120.2 48.503 167 73 2 113 276 153 309 6.61e-43 152
Msa1162330 AT1G10120.1 48.503 167 73 2 113 276 153 309 6.61e-43 152
Msa1162330 AT2G42300.5 43.644 236 88 7 3 212 8 224 1.35e-42 147
Msa1162330 AT2G42300.3 43.644 236 88 7 3 212 8 224 1.35e-42 147
Msa1162330 AT2G42300.2 43.644 236 88 7 3 212 8 224 1.75e-42 147
Msa1162330 AT1G26260.3 48.171 164 76 2 104 258 94 257 4.51e-42 149
Msa1162330 AT1G26260.5 48.171 164 76 2 104 258 123 286 5.28e-42 150
Msa1162330 AT4G34530.1 62.393 117 36 1 166 282 165 273 5.82e-42 149
Msa1162330 AT3G23690.1 48.588 177 70 5 129 287 143 316 4.11e-40 145
Msa1162330 AT5G48560.2 73.333 90 23 1 170 258 298 387 1.55e-39 145
Msa1162330 AT5G48560.1 73.333 90 23 1 170 258 298 387 2.17e-39 145
Msa1162330 AT5G50915.3 47.368 171 78 6 140 298 97 267 1.58e-37 135
Msa1162330 AT5G50915.4 47.368 171 78 6 140 298 97 267 1.58e-37 135
Msa1162330 AT1G59640.1 77.215 79 18 0 170 248 133 211 1.77e-37 135
Msa1162330 AT4G36540.2 51.938 129 62 0 128 256 96 224 3.71e-37 135
Msa1162330 AT4G36540.1 51.938 129 62 0 128 256 96 224 3.88e-37 135
Msa1162330 AT2G18300.1 52.672 131 54 3 130 252 134 264 4.23e-37 136
Msa1162330 AT5G50915.1 49.682 157 67 6 140 284 97 253 4.31e-37 135
Msa1162330 AT5G50915.2 49.682 157 67 6 140 284 97 253 4.31e-37 135
Msa1162330 AT2G18300.2 52.672 131 54 3 130 252 134 264 4.36e-37 136
Msa1162330 AT2G18300.3 52.672 131 54 3 130 252 134 264 1.01e-36 135
Msa1162330 AT1G59640.2 77.215 79 18 0 170 248 133 211 1.46e-36 135
Msa1162330 AT5G62610.2 50.370 135 50 4 170 303 150 268 6.34e-33 124
Msa1162330 AT5G62610.1 50.370 135 50 4 170 303 150 268 6.34e-33 124
Msa1162330 AT1G18400.2 68.750 80 25 0 171 250 143 222 1.95e-31 119
Msa1162330 AT1G73830.1 68.354 79 25 0 172 250 146 224 3.72e-31 118
Msa1162330 AT1G73830.2 68.354 79 25 0 172 250 146 224 3.87e-31 118
Msa1162330 AT1G18400.1 68.750 80 25 0 171 250 143 222 4.57e-31 118
Msa1162330 AT1G25330.1 50.427 117 56 1 136 250 65 181 7.64e-30 114
Msa1162330 AT4G30980.1 53.409 88 38 2 153 238 108 194 3.50e-18 84.3
Msa1162330 AT4G30980.2 53.409 88 38 2 153 238 156 242 4.64e-18 84.3
Msa1162330 AT5G58010.1 55.556 81 31 2 172 248 98 177 7.02e-18 83.2
Msa1162330 AT2G24260.2 62.121 66 24 1 173 238 35 99 1.32e-17 81.6
Msa1162330 AT2G24260.1 62.121 66 24 1 173 238 138 202 3.76e-17 81.6
Msa1162330 AT2G20180.7 40.179 112 52 3 130 238 172 271 1.00e-14 75.1
Msa1162330 AT2G20180.1 40.179 112 52 3 130 238 172 271 1.00e-14 75.1
Msa1162330 AT2G20180.5 40.179 112 52 3 130 238 172 271 1.00e-14 75.1
Msa1162330 AT2G20180.4 40.179 112 52 3 130 238 243 342 1.23e-14 75.1
Msa1162330 AT2G20180.6 40.179 112 52 3 130 238 243 342 1.23e-14 75.1
Msa1162330 AT2G20180.2 40.179 112 52 3 130 238 243 342 1.23e-14 75.1
Msa1162330 AT2G20180.3 40.179 112 52 3 130 238 243 342 1.23e-14 75.1
Msa1162330 AT2G20180.8 39.450 109 51 3 130 235 243 339 2.30e-13 70.5
Msa1162330 AT1G09530.3 42.169 83 44 2 159 238 320 401 5.75e-13 70.1
Msa1162330 AT1G09530.2 42.169 83 44 2 159 238 320 401 5.75e-13 70.1
Msa1162330 AT1G09530.5 42.169 83 44 2 159 238 320 401 5.75e-13 70.1
Msa1162330 AT1G09530.1 42.169 83 44 2 159 238 320 401 5.75e-13 70.1
Msa1162330 AT1G09530.4 42.169 83 44 2 159 238 320 401 5.75e-13 70.1
Msa1162330 AT1G09530.6 42.169 83 44 2 159 238 320 401 5.75e-13 70.1
Msa1162330 AT2G42280.1 42.222 90 46 2 152 236 254 342 1.57e-12 68.2
Msa1162330 AT4G09180.1 48.485 66 34 0 172 237 183 248 2.29e-12 66.6
Msa1162330 AT2G42280.3 37.143 105 60 2 152 251 254 357 9.54e-12 65.9
Msa1162330 AT4G28800.1 41.096 73 42 1 176 248 252 323 1.29e-11 65.9
Msa1162330 AT2G46970.1 38.710 93 49 3 158 245 205 294 1.85e-11 65.1
Msa1162330 AT2G46970.3 38.710 93 49 3 158 245 183 272 2.11e-11 65.1
Msa1162330 AT2G46970.2 41.250 80 41 2 171 245 185 263 2.35e-11 64.7
Msa1162330 AT1G35460.1 46.269 67 36 0 171 237 179 245 2.71e-11 63.5
Msa1162330 AT2G43140.1 46.970 66 35 0 171 236 132 197 4.94e-11 62.0
Msa1162330 AT4G28815.2 46.552 58 30 1 176 233 71 127 5.84e-11 62.0
Msa1162330 AT4G28790.1 41.667 72 41 1 176 247 274 344 7.50e-11 63.2
Msa1162330 AT4G02590.3 56.061 66 28 1 173 238 83 147 8.92e-11 62.0
Msa1162330 AT4G02590.2 56.061 66 28 1 173 238 146 210 9.63e-11 62.4
Msa1162330 AT4G02590.1 56.061 66 28 1 173 238 146 210 9.63e-11 62.4

Find 104 sgRNAs with CRISPR-Local

Find 438 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACTGTTGAGTGGCATTTC+TGG 0.127241 7_4:+52984765 None:intergenic
TACCAATTCTTCTTCCTTTC+TGG 0.136124 7_4:+52984059 None:intergenic
TCAACTCTATTAAGTTAAAT+TGG 0.199630 7_4:-52990247 Msa1162330:five_prime_UTR
CGAAGAAATTCAAGGAATTA+TGG 0.209968 7_4:-52990139 Msa1162330:CDS
TTTACAGGGGTCGTCTTTAT+TGG 0.234328 7_4:-52984829 Msa1162330:intron
GGCGATGGTCTTACTCTTCT+TGG 0.241289 7_4:+52989658 None:intergenic
CTCTGATTCTTGTTCTCAGC+TGG 0.252978 7_4:+52989817 None:intergenic
AAATTTCCGTTTGAAGAGTT+TGG 0.262828 7_4:+52990009 None:intergenic
ATCTGGAACGGCGTTGGTTC+TGG 0.271634 7_4:-52986168 Msa1162330:CDS
TTTCAACTTAGACAGGTTAT+TGG 0.276317 7_4:-52985484 Msa1162330:CDS
CATTATGTATACTAACTATA+GGG 0.284046 7_4:-52984011 Msa1162330:three_prime_UTR
TGTTCAGGCAAACTCTAATA+AGG 0.289711 7_4:+52983872 None:intergenic
TCTAAGTTGAAATCAATTCT+TGG 0.318421 7_4:+52985495 None:intergenic
TCATTATGTATACTAACTAT+AGG 0.321952 7_4:-52984012 Msa1162330:three_prime_UTR
GTTTGAAGAGTTTGGGAGAT+AGG 0.336002 7_4:+52990017 None:intergenic
TATAACTCCTCAGCAAATTC+AGG 0.338128 7_4:-52984633 Msa1162330:intron
AATTTCCGTTTGAAGAGTTT+GGG 0.358426 7_4:+52990010 None:intergenic
CCCTTCCCCAGAGTGGTTGA+TGG 0.366276 7_4:+52984703 None:intergenic
GGGAGATAGGGTTTCTGCTC+AGG 0.375415 7_4:+52990030 None:intergenic
CTAAGTTGAAATCAATTCTT+GGG 0.378584 7_4:+52985496 None:intergenic
TAGCGCCATGGTTACGCCTT+TGG 0.380197 7_4:-52984793 Msa1162330:CDS
TAGGGGTCATTCAATCTATA+AGG 0.386194 7_4:-52983993 Msa1162330:three_prime_UTR
GCAGATCTTATCAATGAAAC+TGG 0.387421 7_4:-52985529 Msa1162330:intron
CATGATTTACTACAGATATC+TGG 0.387496 7_4:-52986185 Msa1162330:intron
GATTCTTCTGTGTATAAGAT+TGG 0.402626 7_4:+52990380 None:intergenic
GAGAAAAGAGCGAGAGAAGA+AGG 0.413896 7_4:-52989785 Msa1162330:intron
AGGAATTATGGTTCCGGCGC+CGG 0.419529 7_4:-52990127 Msa1162330:CDS
GGCCAGAAAGGAAGAAGAAT+TGG 0.427877 7_4:-52984061 Msa1162330:three_prime_UTR
TCAATCAACGCGGCGTTAGT+AGG 0.431048 7_4:+52989979 None:intergenic
CACTCAACTACAAACATTGA+AGG 0.438946 7_4:-52990319 Msa1162330:five_prime_UTR
CAATTTGACGAAGAAATTCA+AGG 0.451405 7_4:-52990147 Msa1162330:CDS
AATTCAAGGAATTATGGTTC+CGG 0.452402 7_4:-52990133 Msa1162330:CDS
TTGAACAGAATCGTCGTGAA+TGG 0.467546 7_4:+52990167 None:intergenic
AAACGGACCTTGTCGCAACC+TGG 0.470484 7_4:+52989385 None:intergenic
CTCGACGCAAGAGTGTGTTT+CGG 0.479758 7_4:-52989842 Msa1162330:CDS
GAATTGATTTCAACTTAGAC+AGG 0.479828 7_4:-52985491 Msa1162330:CDS
ATGCATTCCATCAACCACTC+TGG 0.480094 7_4:-52984710 Msa1162330:CDS
GCTTCCACCTACGCTGGCGG+TGG 0.481441 7_4:-52990067 Msa1162330:CDS
CAAGCTACAGTAGGATTAAG+TGG 0.482474 7_4:-52990192 Msa1162330:CDS
TGCATTCCATCAACCACTCT+GGG 0.482872 7_4:-52984709 Msa1162330:CDS
GCACTCAAATCAATTGAAGA+TGG 0.483411 7_4:-52984248 Msa1162330:CDS
AGATTATGACTGAACTATCA+TGG 0.485723 7_4:-52983939 Msa1162330:three_prime_UTR
CACTCTAGGCTAATAGCTAC+TGG 0.486741 7_4:+52984192 None:intergenic
TTTGAAGAGTTTGGGAGATA+GGG 0.487543 7_4:+52990018 None:intergenic
TTCTATTTGTAAGAGTCAGT+TGG 0.489936 7_4:-52984101 Msa1162330:three_prime_UTR
GTAAGAGTCAGTTGGAAACC+TGG 0.500151 7_4:-52984093 Msa1162330:three_prime_UTR
GAGCGGTCTCAACATTCAGC+AGG 0.500451 7_4:-52984133 Msa1162330:three_prime_UTR
TCCATCAACCACTCTGGGGA+AGG 0.505255 7_4:-52984704 Msa1162330:CDS
ACCATCGCCGATGAAACTTC+CGG 0.506458 7_4:-52989644 Msa1162330:CDS
TATGGTTCCGGCGCCGGCAC+CGG 0.508288 7_4:-52990121 Msa1162330:CDS
CGCCGGAGAGAATTCTTCAC+CGG 0.511072 7_4:-52989932 Msa1162330:CDS
ATATATGATATATACACTCT+AGG 0.521240 7_4:+52984178 None:intergenic
AGCTCCACCGCCAGCGTAGG+TGG 0.529657 7_4:+52990063 None:intergenic
GGGAAGCTTCTCACCGTCAC+CGG 0.529780 7_4:+52989625 None:intergenic
TATCTCCCAAACTCTTCAAA+CGG 0.531243 7_4:-52990015 Msa1162330:CDS
AGCCACTGATAGCCATAGCT+TGG 0.534714 7_4:-52989573 Msa1162330:CDS
TCGTTCTTCACACTTTCCAC+CGG 0.535427 7_4:+52989892 None:intergenic
GGCATTTCTGGCCACACCAA+AGG 0.537270 7_4:+52984777 None:intergenic
GCCGATGAAACTTCCGGTGA+CGG 0.538875 7_4:-52989638 Msa1162330:CDS
TATATTATTCGCAGTTAGCA+AGG 0.539009 7_4:-52984160 Msa1162330:three_prime_UTR
GCGAAATTCTCAGTGTTCGC+CGG 0.539326 7_4:-52989949 Msa1162330:CDS
AACGGACCTTGTCGCAACCT+GGG 0.539729 7_4:+52989386 None:intergenic
ACCGGAAGTTTCATCGGCGA+TGG 0.543884 7_4:+52989643 None:intergenic
TTTCTGGCCGAAGAAAATCC+AGG 0.546547 7_4:+52984075 None:intergenic
ACCGTCACCGGAAGTTTCAT+CGG 0.551160 7_4:+52989637 None:intergenic
GGCGAACACTGAGAATTTCG+CGG 0.552144 7_4:+52989951 None:intergenic
TCGGACGCGAACGTGAACAT+AGG 0.566749 7_4:+52989604 None:intergenic
CGGACGCGAACGTGAACATA+GGG 0.568296 7_4:+52989605 None:intergenic
TTACTCGTTCTGCCAAGCTA+TGG 0.571179 7_4:+52989561 None:intergenic
CCATCAACCACTCTGGGGAA+GGG 0.572516 7_4:-52984703 Msa1162330:CDS
ATGTTTGTAGTTGAGTGTGA+TGG 0.582043 7_4:+52990325 None:intergenic
ACAGATATCTGGAACGGCGT+TGG 0.584492 7_4:-52986174 Msa1162330:intron
GATTATGACTGAACTATCAT+GGG 0.585535 7_4:-52983938 Msa1162330:three_prime_UTR
TCATCTTCCCTTCCCCAGAG+TGG 0.595071 7_4:+52984696 None:intergenic
CCATGGTTACGCCTTTGGTG+TGG 0.598563 7_4:-52984788 Msa1162330:CDS
GCAAACTCTACAACGTCAAG+TGG 0.604066 7_4:-52986126 Msa1162330:CDS
ATTATGTATACTAACTATAG+GGG 0.611505 7_4:-52984010 Msa1162330:three_prime_UTR
TCCCGGTGAAGAATTCTCTC+CGG 0.612625 7_4:+52989930 None:intergenic
GCCGGAGAGAATTCTTCACC+GGG 0.619109 7_4:-52989931 Msa1162330:CDS
TGCTGTCTGTTACTGTTGAG+TGG 0.619274 7_4:+52984756 None:intergenic
TGATCTACCTGAATTTGCTG+AGG 0.620278 7_4:+52984626 None:intergenic
AGTAGCTCCACCGCCAGCGT+AGG 0.621042 7_4:+52990060 None:intergenic
TGCCAAGCTATGGCTATCAG+TGG 0.622735 7_4:+52989571 None:intergenic
GTTAGAGCTTCCACCTACGC+TGG 0.629584 7_4:-52990073 Msa1162330:CDS
ATTCTTCACCGGGAGATGAG+CGG 0.630112 7_4:-52989921 Msa1162330:CDS
CAGTAACTTACCTAGCGCCA+TGG 0.633856 7_4:-52984805 Msa1162330:CDS
GGATTCGAATCAGTCTCTTG+AGG 0.634229 7_4:+52989868 None:intergenic
AACTCTACAACGTCAAGTGG+AGG 0.635936 7_4:-52986123 Msa1162330:intron
TCAATGGAACAAGCTACAGT+AGG 0.638623 7_4:-52990201 Msa1162330:CDS
AAAGGCGTAACCATGGCGCT+AGG 0.639275 7_4:+52984795 None:intergenic
TAAGATTGGTTCACAGACAG+AGG 0.641677 7_4:+52990394 None:intergenic
GCAGTTAGCAAGGATTTGAG+CGG 0.644416 7_4:-52984150 Msa1162330:three_prime_UTR
TATCAGTGGCTTGACCTCGT+CGG 0.645396 7_4:+52989585 None:intergenic
AGAGCTTCCACCTACGCTGG+CGG 0.646544 7_4:-52990070 Msa1162330:CDS
CCACACCAAAGGCGTAACCA+TGG 0.654182 7_4:+52984788 None:intergenic
GTTCACGTTCGCGTCCGACG+AGG 0.673051 7_4:-52989599 Msa1162330:CDS
TTTACTACAGATATCTGGAA+CGG 0.675738 7_4:-52986180 Msa1162330:intron
GCTGGTCCCAGGTTGCGACA+AGG 0.681421 7_4:-52989392 Msa1162330:intron
CGCGGCGCGTTCAATCAACG+CGG 0.684814 7_4:+52989969 None:intergenic
TTTGTAGTTGAGTGTGATGG+CGG 0.692568 7_4:+52990328 None:intergenic
GACGTTGTAGAGTTTGCACA+TGG 0.695558 7_4:+52986132 None:intergenic
GACAGCATTATCAACAACAG+TGG 0.705453 7_4:-52984740 Msa1162330:CDS
GCATTCCATCAACCACTCTG+GGG 0.725229 7_4:-52984708 Msa1162330:CDS
AGGTGGAAGCTCTAACAGTG+CGG 0.757659 7_4:+52990080 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAATTAATTAATTGCTTT+TGG - chr7_4:52984836-52984855 Msa1162330:intron 10.0%
!!! AAAATTAATTAATTGCTTTT+GGG - chr7_4:52984837-52984856 Msa1162330:intron 10.0%
!!! TTATTCTTTTATTCAATTTT+TGG - chr7_4:52985739-52985758 Msa1162330:intron 10.0%
!!! TATTCTTTTATTCAATTTTT+GGG - chr7_4:52985740-52985759 Msa1162330:intron 10.0%
!!! AAATTAATTAATTGCTTTTG+GGG - chr7_4:52984838-52984857 Msa1162330:intron 15.0%
!! TAAAGATTAAAAGAGAAAAA+CGG + chr7_4:52984937-52984956 None:intergenic 15.0%
!! CATTAAATAATTAATGTATC+CGG + chr7_4:52985164-52985183 None:intergenic 15.0%
!!! TTTAAGTTACGATTTAATAA+CGG - chr7_4:52985230-52985249 Msa1162330:intron 15.0%
!! ACTAGTAAAATTTAATAACT+CGG + chr7_4:52985612-52985631 None:intergenic 15.0%
!! TTATTTCAATTTATGTATCT+TGG - chr7_4:52985663-52985682 Msa1162330:intron 15.0%
!!! TAATAAATCTTTATTTGCTT+AGG - chr7_4:52987222-52987241 Msa1162330:intron 15.0%
!! TAGTATAATGTAAAATAAAG+TGG - chr7_4:52987303-52987322 Msa1162330:intron 15.0%
!! AGTATAATGTAAAATAAAGT+GGG - chr7_4:52987304-52987323 Msa1162330:intron 15.0%
!!! CATGTTTATTATTTTCTATT+TGG - chr7_4:52988262-52988281 Msa1162330:intron 15.0%
!! TTTGAAGAAGAAAATAATTT+AGG + chr7_4:52988347-52988366 None:intergenic 15.0%
!! TAATTCATTTATTTATTTCC+CGG - chr7_4:52988905-52988924 Msa1162330:intron 15.0%
!! ATAAATAATAGGATAGATTT+AGG + chr7_4:52989232-52989251 None:intergenic 15.0%
!! TAAATCTATCCTATTATTTA+TGG - chr7_4:52989231-52989250 Msa1162330:intron 15.0%
!! TCAACTCTATTAAGTTAAAT+TGG - chr7_4:52984055-52984074 Msa1162330:three_prime_UTR 20.0%
!!! TCGATAATTTTGTGAAATTT+AGG - chr7_4:52984606-52984625 Msa1162330:intron 20.0%
!!! CGATAATTTTGTGAAATTTA+GGG - chr7_4:52984607-52984626 Msa1162330:intron 20.0%
!!! TAAGCAAAAAACTACTTTTT+AGG - chr7_4:52985100-52985119 Msa1162330:intron 20.0%
!!! TAAGCAAAAAACACTTTTTT+AGG + chr7_4:52985189-52985208 None:intergenic 20.0%
!!! TTTAATAACGGTTTTGTTAT+TGG - chr7_4:52985242-52985261 Msa1162330:intron 20.0%
!! AAATGAAAATTCATGCTTTA+AGG - chr7_4:52985525-52985544 Msa1162330:CDS 20.0%
!! GTGAATAAATTAGAAATTTG+AGG - chr7_4:52985547-52985566 Msa1162330:intron 20.0%
!!! ACATTTTATTATGAATCACA+TGG - chr7_4:52986068-52986087 Msa1162330:intron 20.0%
!! TCTAAAAGTTGTAAAAAAAG+TGG + chr7_4:52986312-52986331 None:intergenic 20.0%
!!! GATTTTGTTTAATTTAAACG+TGG - chr7_4:52986806-52986825 Msa1162330:intron 20.0%
!!! TTTTTAATTTTGATCCCTTT+TGG + chr7_4:52986953-52986972 None:intergenic 20.0%
!! AAAAACATCACCAATAATAT+TGG - chr7_4:52987023-52987042 Msa1162330:intron 20.0%
!! TAGAGATAAACCAATATTAT+TGG + chr7_4:52987036-52987055 None:intergenic 20.0%
!! AAAAACATCACCAATAATAT+TGG - chr7_4:52987023-52987042 Msa1162330:intron 20.0%
!! TAGAGATAAACCAATATTAT+TGG + chr7_4:52987036-52987055 None:intergenic 20.0%
!! TAATCATTGAACTAATAACA+TGG + chr7_4:52987375-52987394 None:intergenic 20.0%
!! ATATGATGTTATAATGCATT+TGG - chr7_4:52988030-52988049 Msa1162330:intron 20.0%
!!! ATAGAAACTTTTGAAAGAAA+GGG - chr7_4:52988309-52988328 Msa1162330:intron 20.0%
!! AAGAAGAAAATAATTTAGGA+AGG + chr7_4:52988343-52988362 None:intergenic 20.0%
!! TCTTCTTCAAAATTGATATT+TGG - chr7_4:52988356-52988375 Msa1162330:intron 20.0%
!! GTCAAATAATCCAAAATTAT+GGG + chr7_4:52988500-52988519 None:intergenic 20.0%
!! AGTCAAATAATCCAAAATTA+TGG + chr7_4:52988501-52988520 None:intergenic 20.0%
!!! AAAAAAAATCCTTTTCTCAA+TGG - chr7_4:52988531-52988550 Msa1162330:intron 20.0%
!!! AAAAAAATCCTTTTCTCAAT+GGG - chr7_4:52988532-52988551 Msa1162330:intron 20.0%
!! AATTCATTTATTTATTTCCC+GGG - chr7_4:52988906-52988925 Msa1162330:intron 20.0%
!! AATATAATTTCTTCACTTGA+TGG - chr7_4:52989744-52989763 Msa1162330:intron 20.0%
!! TTTCATAAATAGAAAGTGAT+TGG - chr7_4:52989792-52989811 Msa1162330:CDS 20.0%
!!! TTTGATAATGAAAATCAGAA+AGG - chr7_4:52989841-52989860 Msa1162330:CDS 20.0%
!!! TTGATAATGAAAATCAGAAA+GGG - chr7_4:52989842-52989861 Msa1162330:CDS 20.0%
!! ATGCCCATAATTAATAATAT+TGG - chr7_4:52989876-52989895 Msa1162330:CDS 20.0%
!! GCTCCAATATTATTAATTAT+GGG + chr7_4:52989882-52989901 None:intergenic 20.0%
!! TGCTCCAATATTATTAATTA+TGG + chr7_4:52989883-52989902 None:intergenic 20.0%
!! ATATATGATATATACACTCT+AGG + chr7_4:52990127-52990146 None:intergenic 20.0%
!! TCATTATGTATACTAACTAT+AGG - chr7_4:52990290-52990309 Msa1162330:five_prime_UTR 20.0%
!! CATTATGTATACTAACTATA+GGG - chr7_4:52990291-52990310 Msa1162330:five_prime_UTR 20.0%
!! ATTATGTATACTAACTATAG+GGG - chr7_4:52990292-52990311 Msa1162330:five_prime_UTR 20.0%
!! ATTTCATTTTCTTTGCTCAA+TGG - chr7_4:52984085-52984104 Msa1162330:three_prime_UTR 25.0%
! TTAATTAGTGATTAGTGAGA+AGG + chr7_4:52984767-52984786 None:intergenic 25.0%
! TTGATTATTCTACGTAACTA+AGG + chr7_4:52984977-52984996 None:intergenic 25.0%
! AGTATTTATTTGCACTTTAG+GGG + chr7_4:52985063-52985082 None:intergenic 25.0%
! GAGTATTTATTTGCACTTTA+GGG + chr7_4:52985064-52985083 None:intergenic 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG - chr7_4:52985199-52985218 Msa1162330:intron 25.0%
! AGATATTGTAACATACATGA+TGG + chr7_4:52985582-52985601 None:intergenic 25.0%
! GTAAAATTTAATAACTCGGT+TGG + chr7_4:52985608-52985627 None:intergenic 25.0%
! CCATATTAGAATTTCTCATA+AGG + chr7_4:52985770-52985789 None:intergenic 25.0%
! CCTTATGAGAAATTCTAATA+TGG - chr7_4:52985767-52985786 Msa1162330:intron 25.0%
! AAGACCAAATAAATAGTCTT+TGG + chr7_4:52985917-52985936 None:intergenic 25.0%
! TTCTTATTGGTCAAAAACAA+TGG + chr7_4:52986393-52986412 None:intergenic 25.0%
! ATCATTACTCTACATAAAAG+TGG - chr7_4:52986464-52986483 Msa1162330:intron 25.0%
! AATACTCCAATTTGATGAAT+TGG - chr7_4:52986972-52986991 Msa1162330:intron 25.0%
! ATTGAACCAATTCATCAAAT+TGG + chr7_4:52986981-52987000 None:intergenic 25.0%
! TCTCTATAACATTGATGAAT+TGG - chr7_4:52987050-52987069 Msa1162330:intron 25.0%
! ATTATACTACCAATTCTCAT+GGG + chr7_4:52987292-52987311 None:intergenic 25.0%
!! TGTAATGTTTGTTTGATTTC+AGG - chr7_4:52987340-52987359 Msa1162330:intron 25.0%
!! GTAATGTTTGTTTGATTTCA+GGG - chr7_4:52987341-52987360 Msa1162330:intron 25.0%
!! CATTCATTTTACTTCTTGTT+AGG + chr7_4:52987408-52987427 None:intergenic 25.0%
! CTAACAAGAAGTAAAATGAA+TGG - chr7_4:52987406-52987425 Msa1162330:intron 25.0%
! ATAAGCCAGAAGATATTAAA+GGG + chr7_4:52987490-52987509 None:intergenic 25.0%
! ATCATTCACTTACTTACAAA+GGG + chr7_4:52987624-52987643 None:intergenic 25.0%
! AATCATTCACTTACTTACAA+AGG + chr7_4:52987625-52987644 None:intergenic 25.0%
! GGTTCTTAATATTAGACATT+AGG + chr7_4:52987843-52987862 None:intergenic 25.0%
!!! AATCTATTTTTACATTCAGC+AGG - chr7_4:52988234-52988253 Msa1162330:intron 25.0%
!!! ATTTGGTTCTCAATTAATCA+TGG - chr7_4:52988279-52988298 Msa1162330:intron 25.0%
!!! CATAGAAACTTTTGAAAGAA+AGG - chr7_4:52988308-52988327 Msa1162330:intron 25.0%
!!! TAACCATGTTTTGAAATGAA+TGG - chr7_4:52988665-52988684 Msa1162330:intron 25.0%
!! CTAAGTTGAAATCAATTCTT+GGG + chr7_4:52988809-52988828 None:intergenic 25.0%
!! TCTAAGTTGAAATCAATTCT+TGG + chr7_4:52988810-52988829 None:intergenic 25.0%
! ACTTTCTATTCTTCCTTAAT+TGG - chr7_4:52988980-52988999 Msa1162330:intron 25.0%
! TATTTGTCCAATAACTGAAA+TGG - chr7_4:52989049-52989068 Msa1162330:intron 25.0%
! AATAACTGAAATGGTACATT+GGG - chr7_4:52989058-52989077 Msa1162330:intron 25.0%
! ATTACAGATCTTAGTTGTTA+TGG + chr7_4:52989144-52989163 None:intergenic 25.0%
! TTTCTATTTATGAAAACCAG+TGG + chr7_4:52989787-52989806 None:intergenic 25.0%
! TTATTGACAATGGAAATTGT+TGG - chr7_4:52989914-52989933 Msa1162330:CDS 25.0%
! TATTTCCTGACAAGAAAATT+TGG - chr7_4:52989983-52990002 Msa1162330:CDS 25.0%
GATTCTTCTGTGTATAAGAT+TGG + chr7_4:52983925-52983944 None:intergenic 30.0%
CAATTTGACGAAGAAATTCA+AGG - chr7_4:52984155-52984174 Msa1162330:three_prime_UTR 30.0%
CGAAGAAATTCAAGGAATTA+TGG - chr7_4:52984163-52984182 Msa1162330:three_prime_UTR 30.0%
AATTCAAGGAATTATGGTTC+CGG - chr7_4:52984169-52984188 Msa1162330:three_prime_UTR 30.0%
AATTTCCGTTTGAAGAGTTT+GGG + chr7_4:52984295-52984314 None:intergenic 30.0%
AAATTTCCGTTTGAAGAGTT+TGG + chr7_4:52984296-52984315 None:intergenic 30.0%
AAGAAGGTAACGATGAAATT+AGG - chr7_4:52984533-52984552 Msa1162330:intron 30.0%
AGAAGGTAACGATGAAATTA+GGG - chr7_4:52984534-52984553 Msa1162330:intron 30.0%
TCTACGTAACTAAGGATTTA+AGG + chr7_4:52984969-52984988 None:intergenic 30.0%
! GGAGTATTTATTTGCACTTT+AGG + chr7_4:52985065-52985084 None:intergenic 30.0%
ATCTAACGTATAAATGTGAC+CGG - chr7_4:52985142-52985161 Msa1162330:intron 30.0%
! TTTTTGTGGGGTTAAGTTAA+AGG + chr7_4:52985269-52985288 None:intergenic 30.0%
!!! ACTACAGTACTACTTTTTGT+GGG + chr7_4:52985282-52985301 None:intergenic 30.0%
!!! AACTACAGTACTACTTTTTG+TGG + chr7_4:52985283-52985302 None:intergenic 30.0%
AATTACACAGATACCAAGTT+TGG + chr7_4:52985331-52985350 None:intergenic 30.0%
ATAAAGTGAAACCAAAGAGA+AGG + chr7_4:52985357-52985376 None:intergenic 30.0%
! TCTCTTTGGTTTCACTTTAT+TGG - chr7_4:52985357-52985376 Msa1162330:intron 30.0%
! CTCTTTGGTTTCACTTTATT+GGG - chr7_4:52985358-52985377 Msa1162330:intron 30.0%
GAAAAAGATTTGTAACCAGA+AGG + chr7_4:52985388-52985407 None:intergenic 30.0%
!!! TGGTTACAAATCTTTTTCGA+AGG - chr7_4:52985390-52985409 Msa1162330:intron 30.0%
ATCTAATAAACCTGTAGAGA+AGG + chr7_4:52985464-52985483 None:intergenic 30.0%
!!! TTGGACTTTTTTTAGCAAGT+TGG - chr7_4:52985682-52985701 Msa1162330:intron 30.0%
!!! TGGACTTTTTTTAGCAAGTT+GGG - chr7_4:52985683-52985702 Msa1162330:intron 30.0%
GTGTCCAAAGACTATTTATT+TGG - chr7_4:52985910-52985929 Msa1162330:intron 30.0%
! AAAATGTTTTGCATTAGACG+AGG + chr7_4:52986001-52986020 None:intergenic 30.0%
AGGTTGCACATTAAACTTAT+GGG + chr7_4:52986027-52986046 None:intergenic 30.0%
AAGGTTGCACATTAAACTTA+TGG + chr7_4:52986028-52986047 None:intergenic 30.0%
AATGATTCAGTCAAGTCAAA+AGG + chr7_4:52986047-52986066 None:intergenic 30.0%
ATTTAATACTCCTCAACACA+TGG + chr7_4:52986135-52986154 None:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG + chr7_4:52986380-52986399 None:intergenic 30.0%
!! TGTTTTTGACCAATAAGAAG+TGG - chr7_4:52986394-52986413 Msa1162330:intron 30.0%
! GTTTTTGACCAATAAGAAGT+GGG - chr7_4:52986395-52986414 Msa1162330:intron 30.0%
!! TTGTTTTTCCCACTTCTTAT+TGG + chr7_4:52986406-52986425 None:intergenic 30.0%
AATAAGAAGTGGGAAAAACA+AGG - chr7_4:52986405-52986424 Msa1162330:intron 30.0%
TCAACAAAGTTGTCATCAAA+TGG - chr7_4:52986431-52986450 Msa1162330:intron 30.0%
! GTGTCATATAACCTTTTAGA+AGG + chr7_4:52986686-52986705 None:intergenic 30.0%
! TCTAGTGTTCCAATACATTT+TGG + chr7_4:52986878-52986897 None:intergenic 30.0%
CTTTGCGTTGAATTTAATCT+AGG - chr7_4:52986912-52986931 Msa1162330:intron 30.0%
CAAACATAGTAACACCAAAA+GGG - chr7_4:52986936-52986955 Msa1162330:intron 30.0%
! TTTTTACCAAACTATGACAC+TGG + chr7_4:52987006-52987025 None:intergenic 30.0%
! TTTTTACCAAACTATGACAC+TGG + chr7_4:52987006-52987025 None:intergenic 30.0%
AATTCTCATGGGAATTCTAT+AGG + chr7_4:52987281-52987300 None:intergenic 30.0%
TATAGAATTCCCATGAGAAT+TGG - chr7_4:52987280-52987299 Msa1162330:intron 30.0%
CATTATACTACCAATTCTCA+TGG + chr7_4:52987293-52987312 None:intergenic 30.0%
TAAACGTCGTATACAATCAA+TGG + chr7_4:52987458-52987477 None:intergenic 30.0%
ATTTCCCCTTTAATATCTTC+TGG - chr7_4:52987482-52987501 Msa1162330:intron 30.0%
TAAGCCAGAAGATATTAAAG+GGG + chr7_4:52987489-52987508 None:intergenic 30.0%
GATAAGCCAGAAGATATTAA+AGG + chr7_4:52987491-52987510 None:intergenic 30.0%
! TTCTATCCATTTTGCATCAA+GGG - chr7_4:52987595-52987614 Msa1162330:intron 30.0%
TCATTCACTTACTTACAAAG+GGG + chr7_4:52987623-52987642 None:intergenic 30.0%
! ATGATTTGTCCATCTTATGA+TGG - chr7_4:52987639-52987658 Msa1162330:intron 30.0%
TCATAGAGATAATGCCATAA+TGG + chr7_4:52987673-52987692 None:intergenic 30.0%
! ATTTTGTCATCCTTTACTGA+TGG + chr7_4:52987717-52987736 None:intergenic 30.0%
ATCAGTAAAGGATGACAAAA+TGG - chr7_4:52987716-52987735 Msa1162330:intron 30.0%
TCAGTAAAGGATGACAAAAT+GGG - chr7_4:52987717-52987736 Msa1162330:intron 30.0%
! TTGTTATTACTGTTCTGTTG+CGG + chr7_4:52987942-52987961 None:intergenic 30.0%
CAATAACAAGGGATCATTTA+TGG + chr7_4:52987980-52987999 None:intergenic 30.0%
TCTACCTCAAACAATAACAA+GGG + chr7_4:52987991-52988010 None:intergenic 30.0%
TTCTACCTCAAACAATAACA+AGG + chr7_4:52987992-52988011 None:intergenic 30.0%
TCATATTATCCGTGCAATTA+AGG + chr7_4:52988016-52988035 None:intergenic 30.0%
CATGATTTACTACAGATATC+TGG - chr7_4:52988117-52988136 Msa1162330:intron 30.0%
TTTACTACAGATATCTGGAA+CGG - chr7_4:52988122-52988141 Msa1162330:intron 30.0%
!!! TGAATATTTTGGAGTGTCAT+TGG - chr7_4:52988404-52988423 Msa1162330:intron 30.0%
!!! TGGATTTTTTGCATGCTTAT+TGG - chr7_4:52988582-52988601 Msa1162330:intron 30.0%
TCACCATTCATTTCAAAACA+TGG + chr7_4:52988671-52988690 None:intergenic 30.0%
CGAGTTAACTTTCATCAAAA+TGG - chr7_4:52988721-52988740 Msa1162330:intron 30.0%
! GAATTGATTTCAACTTAGAC+AGG - chr7_4:52988811-52988830 Msa1162330:intron 30.0%
TTTCAACTTAGACAGGTTAT+TGG - chr7_4:52988818-52988837 Msa1162330:intron 30.0%
CAATGTACCATTTCAGTTAT+TGG + chr7_4:52989059-52989078 None:intergenic 30.0%
CAATAACTGAAATGGTACAT+TGG - chr7_4:52989057-52989076 Msa1162330:intron 30.0%
ATAACTGAAATGGTACATTG+GGG - chr7_4:52989059-52989078 Msa1162330:intron 30.0%
CTTGAGGATCCATAAATAAT+AGG + chr7_4:52989243-52989262 None:intergenic 30.0%
CTTAAACTTCAATATGCTTG+AGG + chr7_4:52989259-52989278 None:intergenic 30.0%
TTAAGGAGATTGAGATGATA+TGG + chr7_4:52989282-52989301 None:intergenic 30.0%
! AAATCTCCTTGGTAATTTAC+AGG - chr7_4:52989458-52989477 Msa1162330:intron 30.0%
! AATCTCCTTGGTAATTTACA+GGG - chr7_4:52989459-52989478 Msa1162330:intron 30.0%
! TAACTCAAAAGTGAGTTTTC+TGG + chr7_4:52989651-52989670 None:intergenic 30.0%
TATCCCTTCAAAGACAAAAA+TGG + chr7_4:52989820-52989839 None:intergenic 30.0%
! TTCAGATGCTTTATTGACAA+TGG - chr7_4:52989904-52989923 Msa1162330:CDS 30.0%
! AACTTCCAAATTTTCTTGTC+AGG + chr7_4:52989991-52990010 None:intergenic 30.0%
TATATTATTCGCAGTTAGCA+AGG - chr7_4:52990142-52990161 Msa1162330:CDS 30.0%
TTCTATTTGTAAGAGTCAGT+TGG - chr7_4:52990201-52990220 Msa1162330:CDS 30.0%
AGATTATGACTGAACTATCA+TGG - chr7_4:52990363-52990382 Msa1162330:five_prime_UTR 30.0%
GATTATGACTGAACTATCAT+GGG - chr7_4:52990364-52990383 Msa1162330:five_prime_UTR 30.0%
ATGTTTGTAGTTGAGTGTGA+TGG + chr7_4:52983980-52983999 None:intergenic 35.0%
CACTCAACTACAAACATTGA+AGG - chr7_4:52983983-52984002 Msa1162330:three_prime_UTR 35.0%
TTTGAAGAGTTTGGGAGATA+GGG + chr7_4:52984287-52984306 None:intergenic 35.0%
TATCTCCCAAACTCTTCAAA+CGG - chr7_4:52984287-52984306 Msa1162330:intron 35.0%
!!! ATTAATTGCTTTTGGGGTGT+AGG - chr7_4:52984844-52984863 Msa1162330:intron 35.0%
! TATGAAGCTTTTACAAGAGC+TGG - chr7_4:52984892-52984911 Msa1162330:intron 35.0%
!!! TGCTTCATTGATTTTGAGTG+TGG - chr7_4:52985007-52985026 Msa1162330:intron 35.0%
TGCTTATAAATGTGACCAGA+GGG + chr7_4:52985086-52985105 None:intergenic 35.0%
TTGCTTATAAATGTGACCAG+AGG + chr7_4:52985087-52985106 None:intergenic 35.0%
!!! CTACAGTACTACTTTTTGTG+GGG + chr7_4:52985281-52985300 None:intergenic 35.0%
GTGTAATTTCACCTTCTCTT+TGG - chr7_4:52985343-52985362 Msa1162330:intron 35.0%
ACTTTATTGGGATTTCCTTC+TGG - chr7_4:52985370-52985389 Msa1162330:intron 35.0%
GGGTAAAGGGTTGAAAAATT+GGG + chr7_4:52985425-52985444 None:intergenic 35.0%
AGGGTAAAGGGTTGAAAAAT+TGG + chr7_4:52985426-52985445 None:intergenic 35.0%
ATGTCAGAAAAGAGGGTAAA+GGG + chr7_4:52985438-52985457 None:intergenic 35.0%
AATGTCAGAAAAGAGGGTAA+AGG + chr7_4:52985439-52985458 None:intergenic 35.0%
AAGGTCAATGTCAGAAAAGA+GGG + chr7_4:52985445-52985464 None:intergenic 35.0%
! TTTAGCAAGTTGGGTCAATT+TGG - chr7_4:52985692-52985711 Msa1162330:intron 35.0%
! TTAGCAAGTTGGGTCAATTT+GGG - chr7_4:52985693-52985712 Msa1162330:intron 35.0%
GAGACCAAACAAATAGTGTT+TGG - chr7_4:52985794-52985813 Msa1162330:intron 35.0%
GTGACCAAACACTATTTGTT+TGG + chr7_4:52985801-52985820 None:intergenic 35.0%
!! TTTATTTGGTCTTGTGACCA+TGG - chr7_4:52985924-52985943 Msa1162330:intron 35.0%
!! TTATTTGGTCTTGTGACCAT+GGG - chr7_4:52985925-52985944 Msa1162330:intron 35.0%
ACTAACATCATGTACAGTGA+TGG + chr7_4:52985975-52985994 None:intergenic 35.0%
GGTTGCACATTAAACTTATG+GGG + chr7_4:52986026-52986045 None:intergenic 35.0%
TTTCACCAAGTATTATCACG+AGG - chr7_4:52986098-52986117 Msa1162330:intron 35.0%
TTATGCCTCGTGATAATACT+TGG + chr7_4:52986106-52986125 None:intergenic 35.0%
!! GGTGGATGTTCTTTTTAAGA+AGG - chr7_4:52986247-52986266 Msa1162330:intron 35.0%
TCTCTTTCAGTTTCACAGAT+TGG + chr7_4:52986515-52986534 None:intergenic 35.0%
AAGCTTTCGATTGATGAGAA+TGG - chr7_4:52986559-52986578 Msa1162330:intron 35.0%
ACAAGATAGTGCCTTCTAAA+AGG - chr7_4:52986672-52986691 Msa1162330:intron 35.0%
GTGATCTAGACCTAGTATAT+TGG - chr7_4:52986706-52986725 Msa1162330:intron 35.0%
! ACTGTTGTACAGTTTTCATG+AGG - chr7_4:52986833-52986852 Msa1162330:intron 35.0%
! AGTGTTCCAATACATTTTGG+TGG + chr7_4:52986875-52986894 None:intergenic 35.0%
!!! CCTTTTGGTGTTACTATGTT+TGG + chr7_4:52986938-52986957 None:intergenic 35.0%
CCAAACATAGTAACACCAAA+AGG - chr7_4:52986935-52986954 Msa1162330:intron 35.0%
! AGAGCGTCTAAAACTAACAT+TGG + chr7_4:52987150-52987169 None:intergenic 35.0%
!! TAATATCTTCTGGCTTATCG+TGG - chr7_4:52987492-52987511 Msa1162330:intron 35.0%
! CTTCTATCCATTTTGCATCA+AGG - chr7_4:52987594-52987613 Msa1162330:intron 35.0%
! TCTATCCATTTTGCATCAAG+GGG - chr7_4:52987596-52987615 Msa1162330:intron 35.0%
TGGCATTATCTCTATGACTA+TGG - chr7_4:52987676-52987695 Msa1162330:intron 35.0%
GGCATTATCTCTATGACTAT+GGG - chr7_4:52987677-52987696 Msa1162330:intron 35.0%
TATCTCTATGACTATGGGTT+CGG - chr7_4:52987682-52987701 Msa1162330:intron 35.0%
GTAATAGAGTCCATCAGTAA+AGG - chr7_4:52987704-52987723 Msa1162330:intron 35.0%
CAGTAAAGGATGACAAAATG+GGG - chr7_4:52987718-52987737 Msa1162330:intron 35.0%
!! TGATCCCTTGTTATTGTTTG+AGG - chr7_4:52987984-52988003 Msa1162330:intron 35.0%
GTAGTAAATCATGTCATGTC+AGG + chr7_4:52988110-52988129 None:intergenic 35.0%
! GGTGCAGTACTTGAATATTT+TGG - chr7_4:52988393-52988412 Msa1162330:intron 35.0%
! AGTGTCATTGGAACACATAA+AGG - chr7_4:52988416-52988435 Msa1162330:intron 35.0%
AATCCAAAATTATGGGACCA+TGG + chr7_4:52988493-52988512 None:intergenic 35.0%
TAAGTAGACCCATTGAGAAA+AGG + chr7_4:52988543-52988562 None:intergenic 35.0%
TGCAAAAAATCCACAGTATG+AGG + chr7_4:52988575-52988594 None:intergenic 35.0%
GCAGATCTTATCAATGAAAC+TGG - chr7_4:52988773-52988792 Msa1162330:intron 35.0%
ATTTATTTATTTCCCGGGCT+GGG - chr7_4:52988911-52988930 Msa1162330:intron 35.0%
! TTCTTCCTTAATTGGTTCCA+TGG - chr7_4:52988988-52989007 Msa1162330:intron 35.0%
! CACTATATACAAAGTGTCCA+TGG + chr7_4:52989008-52989027 None:intergenic 35.0%
AAGATGATTGTCGCCAATTA+CGG - chr7_4:52989089-52989108 Msa1162330:intron 35.0%
GTGTAAACCTAAGCACTTAT+TGG + chr7_4:52989202-52989221 None:intergenic 35.0%
TAAGTGCTTAGGTTTACACT+AGG - chr7_4:52989203-52989222 Msa1162330:intron 35.0%
CATCTCAATCTCCTTAATCA+AGG - chr7_4:52989285-52989304 Msa1162330:intron 35.0%
GTGTTTGAATGTCTTCAACT+AGG - chr7_4:52989346-52989365 Msa1162330:intron 35.0%
TGAATGTCTTCAACTAGGTT+TGG - chr7_4:52989351-52989370 Msa1162330:intron 35.0%
GTTCTCAACGTTAACTGAAA+AGG + chr7_4:52989430-52989449 None:intergenic 35.0%
TTTCAGTTAACGTTGAGAAC+CGG - chr7_4:52989430-52989449 Msa1162330:CDS 35.0%
! TACCAAGGAGATTTTATCAC+CGG + chr7_4:52989452-52989471 None:intergenic 35.0%
! ATCTCCTTGGTAATTTACAG+GGG - chr7_4:52989460-52989479 Msa1162330:intron 35.0%
TATAACTCCTCAGCAAATTC+AGG - chr7_4:52989669-52989688 Msa1162330:CDS 35.0%
!!! GAGCCATTTTTGTCTTTGAA+GGG - chr7_4:52989814-52989833 Msa1162330:CDS 35.0%
GACAATGGAAATTGTTGGAA+AGG - chr7_4:52989919-52989938 Msa1162330:CDS 35.0%
GCACTCAAATCAATTGAAGA+TGG - chr7_4:52990054-52990073 Msa1162330:CDS 35.0%
! TTGGAAACCTGGATTTTCTT+CGG - chr7_4:52990220-52990239 Msa1162330:exon 35.0%
TACCAATTCTTCTTCCTTTC+TGG + chr7_4:52990246-52990265 None:intergenic 35.0%
TAGGGGTCATTCAATCTATA+AGG - chr7_4:52990309-52990328 Msa1162330:five_prime_UTR 35.0%
! TAAGATTGGTTCACAGACAG+AGG + chr7_4:52983911-52983930 None:intergenic 40.0%
TTTGTAGTTGAGTGTGATGG+CGG + chr7_4:52983977-52983996 None:intergenic 40.0%
TCAATGGAACAAGCTACAGT+AGG - chr7_4:52984101-52984120 Msa1162330:three_prime_UTR 40.0%
CAAGCTACAGTAGGATTAAG+TGG - chr7_4:52984110-52984129 Msa1162330:three_prime_UTR 40.0%
TTGAACAGAATCGTCGTGAA+TGG + chr7_4:52984138-52984157 None:intergenic 40.0%
GTTTGAAGAGTTTGGGAGAT+AGG + chr7_4:52984288-52984307 None:intergenic 40.0%
GTGCAAATAAATACTCCCTC+TGG - chr7_4:52985068-52985087 Msa1162330:intron 40.0%
TTGCTTATAAATGTGACCGG+AGG - chr7_4:52985202-52985221 Msa1162330:intron 40.0%
TGCTTATAAATGTGACCGGA+GGG - chr7_4:52985203-52985222 Msa1162330:intron 40.0%
CGTAACTTAAATACTCCCTC+CGG + chr7_4:52985221-52985240 None:intergenic 40.0%
!! AGATAGAGAAGTGCCAAACT+TGG - chr7_4:52985315-52985334 Msa1162330:intron 40.0%
GAAGGTCAATGTCAGAAAAG+AGG + chr7_4:52985446-52985465 None:intergenic 40.0%
ACATCATGTACAGTGATGGT+AGG + chr7_4:52985971-52985990 None:intergenic 40.0%
AATACTCCTCAACACATGGA+GGG + chr7_4:52986131-52986150 None:intergenic 40.0%
TAATACTCCTCAACACATGG+AGG + chr7_4:52986132-52986151 None:intergenic 40.0%
ACATGTGCAACACAAATGGA+TGG + chr7_4:52986163-52986182 None:intergenic 40.0%
TCCATTTGTGTTGCACATGT+AGG - chr7_4:52986163-52986182 Msa1162330:CDS 40.0%
TCCTACATGTGCAACACAAA+TGG + chr7_4:52986167-52986186 None:intergenic 40.0%
GGCAGATGATCCAATATACT+AGG + chr7_4:52986719-52986738 None:intergenic 40.0%
TCGCTTCCACCAAAATGTAT+TGG - chr7_4:52986866-52986885 Msa1162330:intron 40.0%
CAATCACCAGTGTCATAGTT+TGG - chr7_4:52986997-52987016 Msa1162330:intron 40.0%
CAATCACCAGTGTCATAGTT+TGG - chr7_4:52986997-52987016 Msa1162330:intron 40.0%
! GCGTCTAAAACTAACATTGG+AGG + chr7_4:52987147-52987166 None:intergenic 40.0%
TAACCCACATGCTTACCATT+TGG + chr7_4:52987521-52987540 None:intergenic 40.0%
ATAATGCCATAATGGCACCA+CGG + chr7_4:52987665-52987684 None:intergenic 40.0%
! GAGAACAGAGTGCATACTTT+TGG - chr7_4:52987742-52987761 Msa1162330:intron 40.0%
! TCTAATCCAGTTAGCTCTCT+TGG + chr7_4:52987782-52987801 None:intergenic 40.0%
AGGTAGAAGCCTTAATTGCA+CGG - chr7_4:52988004-52988023 Msa1162330:intron 40.0%
!! ATATTTGGTCCTCTAGAGCT+AGG - chr7_4:52988371-52988390 Msa1162330:intron 40.0%
!! TATTTGGTCCTCTAGAGCTA+GGG - chr7_4:52988372-52988391 Msa1162330:intron 40.0%
AATGCTTACTGCTTGCTTAC+AGG + chr7_4:52988450-52988469 None:intergenic 40.0%
ATTATCCTCTCCTCATACTG+TGG - chr7_4:52988562-52988581 Msa1162330:intron 40.0%
AAAATCCACAGTATGAGGAG+AGG + chr7_4:52988570-52988589 None:intergenic 40.0%
CATTTATTTATTTCCCGGGC+TGG - chr7_4:52988910-52988929 Msa1162330:intron 40.0%
TTTATTTATTTCCCGGGCTG+GGG - chr7_4:52988912-52988931 Msa1162330:intron 40.0%
!! AGAAAGTGCTATGTAAGCAG+AGG + chr7_4:52988967-52988986 None:intergenic 40.0%
AGTGTCCATGGAACCAATTA+AGG + chr7_4:52988996-52989015 None:intergenic 40.0%
ATGGCATAAACCACCGTAAT+TGG + chr7_4:52989105-52989124 None:intergenic 40.0%
ACAAGTAGCAATGTGAGTGT+TGG - chr7_4:52989171-52989190 Msa1162330:intron 40.0%
!! TAGCAATGTGAGTGTTGGTA+GGG - chr7_4:52989176-52989195 Msa1162330:intron 40.0%
CAATCTCCTTAATCAAGGTC+AGG - chr7_4:52989290-52989309 Msa1162330:intron 40.0%
! TCTTCAACTAGGTTTGGAGT+TGG - chr7_4:52989357-52989376 Msa1162330:intron 40.0%
! CTTCAACTAGGTTTGGAGTT+GGG - chr7_4:52989358-52989377 Msa1162330:intron 40.0%
! TTCAACTAGGTTTGGAGTTG+GGG - chr7_4:52989359-52989378 Msa1162330:intron 40.0%
AACCGGTGATAAAATCTCCT+TGG - chr7_4:52989447-52989466 Msa1162330:intron 40.0%
TTTACAGGGGTCGTCTTTAT+TGG - chr7_4:52989473-52989492 Msa1162330:intron 40.0%
TTACTGTTGAGTGGCATTTC+TGG + chr7_4:52989540-52989559 None:intergenic 40.0%
GACAGCATTATCAACAACAG+TGG - chr7_4:52989562-52989581 Msa1162330:intron 40.0%
!! TGATCTACCTGAATTTGCTG+AGG + chr7_4:52989679-52989698 None:intergenic 40.0%
!! TTCTTCACTTGATGGTGAGA+TGG - chr7_4:52989752-52989771 Msa1162330:intron 40.0%
TTATGAAAACCAGTGGCAGT+AGG + chr7_4:52989780-52989799 None:intergenic 40.0%
!!! GGAGCCATTTTTGTCTTTGA+AGG - chr7_4:52989813-52989832 Msa1162330:CDS 40.0%
! GTGAATGAGCTTGCGTTTTC+CGG + chr7_4:52984203-52984222 None:intergenic 45.0%
TCGTTCTTCACACTTTCCAC+CGG + chr7_4:52984413-52984432 None:intergenic 45.0%
GGATTCGAATCAGTCTCTTG+AGG + chr7_4:52984437-52984456 None:intergenic 45.0%
CTCTGATTCTTGTTCTCAGC+TGG + chr7_4:52984488-52984507 None:intergenic 45.0%
GAGAAAAGAGCGAGAGAAGA+AGG - chr7_4:52984517-52984536 Msa1162330:intron 45.0%
TTACTCGTTCTGCCAAGCTA+TGG + chr7_4:52984744-52984763 None:intergenic 45.0%
CTGACATTGACCTTCTCTAC+AGG - chr7_4:52985451-52985470 Msa1162330:intron 45.0%
AGTGATGGTAGGCATAAGGA+AGG + chr7_4:52985960-52985979 None:intergenic 45.0%
GTACAGTGATGGTAGGCATA+AGG + chr7_4:52985964-52985983 None:intergenic 45.0%
ATAAGTCCCTCCATGTGTTG+AGG - chr7_4:52986122-52986141 Msa1162330:intron 45.0%
! ATTCCTTGTTATGCGCTCCT+TGG - chr7_4:52986210-52986229 Msa1162330:intron 45.0%
TCCTTGGTCCTTGTATGCTT+GGG - chr7_4:52986226-52986245 Msa1162330:intron 45.0%
AACATCCACCCAAGCATACA+AGG + chr7_4:52986237-52986256 None:intergenic 45.0%
GTTATAACACATGTGCAGCG+AGG + chr7_4:52986740-52986759 None:intergenic 45.0%
!! TATCTTCTGGCTTATCGTGG+AGG - chr7_4:52987495-52987514 Msa1162330:intron 45.0%
AGGCCAAATGGTAAGCATGT+GGG - chr7_4:52987515-52987534 Msa1162330:intron 45.0%
!! GTAAGCATGTGGGTTAGTGT+GGG - chr7_4:52987525-52987544 Msa1162330:intron 45.0%
!! TAAGCATGTGGGTTAGTGTG+GGG - chr7_4:52987526-52987545 Msa1162330:intron 45.0%
TACCAACCAAGAGAGCTAAC+TGG - chr7_4:52987773-52987792 Msa1162330:intron 45.0%
! ATCCAGTTAGCTCTCTTGGT+TGG + chr7_4:52987778-52987797 None:intergenic 45.0%
GACGTTGTAGAGTTTGCACA+TGG + chr7_4:52988173-52988192 None:intergenic 45.0%
GCAAACTCTACAACGTCAAG+TGG - chr7_4:52988176-52988195 Msa1162330:intron 45.0%
AACTCTACAACGTCAAGTGG+AGG - chr7_4:52988179-52988198 Msa1162330:intron 45.0%
CATCACACATTAAGCTGCCA+TGG - chr7_4:52988473-52988492 Msa1162330:intron 45.0%
! CTGCCATGGTCCCATAATTT+TGG - chr7_4:52988487-52988506 Msa1162330:intron 45.0%
! TTATTTATTTCCCGGGCTGG+GGG - chr7_4:52988913-52988932 Msa1162330:intron 45.0%
ATGATTGTCGCCAATTACGG+TGG - chr7_4:52989092-52989111 Msa1162330:intron 45.0%
GGTGGTTTATGCCATTCTGT+TGG - chr7_4:52989110-52989129 Msa1162330:intron 45.0%
GGTTTATGCCATTCTGTTGG+AGG - chr7_4:52989113-52989132 Msa1162330:intron 45.0%
!! GTAGCAATGTGAGTGTTGGT+AGG - chr7_4:52989175-52989194 Msa1162330:intron 45.0%
GCAACTCCTGACCTTGATTA+AGG + chr7_4:52989299-52989318 None:intergenic 45.0%
! TCAACTAGGTTTGGAGTTGG+GGG - chr7_4:52989360-52989379 Msa1162330:intron 45.0%
ACGACCCCTGTAAATTACCA+AGG + chr7_4:52989467-52989486 None:intergenic 45.0%
TGCTGTCTGTTACTGTTGAG+TGG + chr7_4:52989549-52989568 None:intergenic 45.0%
ATGCATTCCATCAACCACTC+TGG - chr7_4:52989592-52989611 Msa1162330:CDS 45.0%
TGCATTCCATCAACCACTCT+GGG - chr7_4:52989593-52989612 Msa1162330:CDS 45.0%
CACTCTAGGCTAATAGCTAC+TGG + chr7_4:52990113-52990132 None:intergenic 45.0%
GCAGTTAGCAAGGATTTGAG+CGG - chr7_4:52990152-52990171 Msa1162330:CDS 45.0%
GTAAGAGTCAGTTGGAAACC+TGG - chr7_4:52990209-52990228 Msa1162330:exon 45.0%
! TTTCTGGCCGAAGAAAATCC+AGG + chr7_4:52990230-52990249 None:intergenic 45.0%
! TGGATTTTCTTCGGCCAGAA+AGG - chr7_4:52990229-52990248 Msa1162330:five_prime_UTR 45.0%
GGCCAGAAAGGAAGAAGAAT+TGG - chr7_4:52990241-52990260 Msa1162330:five_prime_UTR 45.0%
!! AATAAAGATTTATTATATAA+AGG + chr7_4:52987217-52987236 None:intergenic 5.0%
! AGGTGGAAGCTCTAACAGTG+CGG + chr7_4:52984225-52984244 None:intergenic 50.0%
TCAATCAACGCGGCGTTAGT+AGG + chr7_4:52984326-52984345 None:intergenic 50.0%
GGCGAACACTGAGAATTTCG+CGG + chr7_4:52984354-52984373 None:intergenic 50.0%
GCGAAATTCTCAGTGTTCGC+CGG - chr7_4:52984353-52984372 Msa1162330:intron 50.0%
TCCCGGTGAAGAATTCTCTC+CGG + chr7_4:52984375-52984394 None:intergenic 50.0%
ATTCTTCACCGGGAGATGAG+CGG - chr7_4:52984381-52984400 Msa1162330:intron 50.0%
! CTCGACGCAAGAGTGTGTTT+CGG - chr7_4:52984460-52984479 Msa1162330:intron 50.0%
! GGCGATGGTCTTACTCTTCT+TGG + chr7_4:52984647-52984666 None:intergenic 50.0%
ACCATCGCCGATGAAACTTC+CGG - chr7_4:52984658-52984677 Msa1162330:CDS 50.0%
ACCGTCACCGGAAGTTTCAT+CGG + chr7_4:52984668-52984687 None:intergenic 50.0%
TATCAGTGGCTTGACCTCGT+CGG + chr7_4:52984720-52984739 None:intergenic 50.0%
AGCCACTGATAGCCATAGCT+TGG - chr7_4:52984729-52984748 Msa1162330:CDS 50.0%
TGCCAAGCTATGGCTATCAG+TGG + chr7_4:52984734-52984753 None:intergenic 50.0%
!!! TTGCTTTTGGGGTGTAGGCT+AGG - chr7_4:52984849-52984868 Msa1162330:intron 50.0%
! CTTTTACAAGAGCTGGTCCC+AGG - chr7_4:52984899-52984918 Msa1162330:intron 50.0%
AGGAAGGAGCTATTCTCCCA+TGG + chr7_4:52985944-52985963 None:intergenic 50.0%
CTCCTTGGTCCTTGTATGCT+TGG - chr7_4:52986225-52986244 Msa1162330:intron 50.0%
ACCCAAGCATACAAGGACCA+AGG + chr7_4:52986230-52986249 None:intergenic 50.0%
TTGGTCCTTGTATGCTTGGG+TGG - chr7_4:52986229-52986248 Msa1162330:intron 50.0%
GAGGCCAAATGGTAAGCATG+TGG - chr7_4:52987514-52987533 Msa1162330:intron 50.0%
!! GGTAAGCATGTGGGTTAGTG+TGG - chr7_4:52987524-52987543 Msa1162330:intron 50.0%
TGTCCATCTTATGATGGCCG+TGG - chr7_4:52987645-52987664 Msa1162330:intron 50.0%
TGTTCTGTTGCGGCTACTAC+TGG + chr7_4:52987932-52987951 None:intergenic 50.0%
! ACAGATATCTGGAACGGCGT+TGG - chr7_4:52988128-52988147 Msa1162330:intron 50.0%
CTACAACGTCAAGTGGAGGT+TGG - chr7_4:52988183-52988202 Msa1162330:intron 50.0%
TGGGGGAGCAATCTGAATGA+TGG - chr7_4:52988930-52988949 Msa1162330:intron 50.0%
TGGCAAGACCTCCAACAGAA+TGG + chr7_4:52989124-52989143 None:intergenic 50.0%
GGTAGGGCCAATAAGTGCTT+AGG - chr7_4:52989192-52989211 Msa1162330:intron 50.0%
AAGGTCAGGAGTTGCTTGCT+TGG - chr7_4:52989304-52989323 Msa1162330:intron 50.0%
! GGAGTTGCTTGCTTGGTTTG+TGG - chr7_4:52989311-52989330 Msa1162330:intron 50.0%
CAGTAACTTACCTAGCGCCA+TGG - chr7_4:52989497-52989516 Msa1162330:intron 50.0%
GCATTCCATCAACCACTCTG+GGG - chr7_4:52989594-52989613 Msa1162330:CDS 50.0%
CTAGGCTAATAGCTACTGGC+TGG + chr7_4:52990109-52990128 None:intergenic 50.0%
AGGAATTATGGTTCCGGCGC+CGG - chr7_4:52984175-52984194 Msa1162330:three_prime_UTR 55.0%
GTTAGAGCTTCCACCTACGC+TGG - chr7_4:52984229-52984248 Msa1162330:exon 55.0%
GGGAGATAGGGTTTCTGCTC+AGG + chr7_4:52984275-52984294 None:intergenic 55.0%
CGCCGGAGAGAATTCTTCAC+CGG - chr7_4:52984370-52984389 Msa1162330:intron 55.0%
GCCGGAGAGAATTCTTCACC+GGG - chr7_4:52984371-52984390 Msa1162330:intron 55.0%
GGAAAAAGCCGCTCATCTCC+CGG + chr7_4:52984392-52984411 None:intergenic 55.0%
!! GGGAGATGAGCGGCTTTTTC+CGG - chr7_4:52984391-52984410 Msa1162330:intron 55.0%
!! AGATGAGCGGCTTTTTCCGG+TGG - chr7_4:52984394-52984413 Msa1162330:intron 55.0%
ACACACTCTTGCGTCGAGCA+AGG + chr7_4:52984458-52984477 None:intergenic 55.0%
ACCGGAAGTTTCATCGGCGA+TGG + chr7_4:52984662-52984681 None:intergenic 55.0%
GCCGATGAAACTTCCGGTGA+CGG - chr7_4:52984664-52984683 Msa1162330:CDS 55.0%
CGGACGCGAACGTGAACATA+GGG + chr7_4:52984700-52984719 None:intergenic 55.0%
TCGGACGCGAACGTGAACAT+AGG + chr7_4:52984701-52984720 None:intergenic 55.0%
AACGGACCTTGTCGCAACCT+GGG + chr7_4:52984919-52984938 None:intergenic 55.0%
AAACGGACCTTGTCGCAACC+TGG + chr7_4:52984920-52984939 None:intergenic 55.0%
! GGACCAAGGAGCGCATAACA+AGG + chr7_4:52986216-52986235 None:intergenic 55.0%
GGCTTATCGTGGAGGCCAAA+TGG - chr7_4:52987503-52987522 Msa1162330:intron 55.0%
!! CATGTGGGTTAGTGTGGGGT+GGG - chr7_4:52987530-52987549 Msa1162330:intron 55.0%
GGGGACCCCTTGATGCAAAA+TGG + chr7_4:52987604-52987623 None:intergenic 55.0%
GCACCACGGCCATCATAAGA+TGG + chr7_4:52987651-52987670 None:intergenic 55.0%
!! TGATGGCCGTGGTGCCATTA+TGG - chr7_4:52987656-52987675 Msa1162330:intron 55.0%
!! ATCTGGAACGGCGTTGGTTC+TGG - chr7_4:52988134-52988153 Msa1162330:intron 55.0%
!! GTACTGCACCCTAGCTCTAG+AGG + chr7_4:52988383-52988402 None:intergenic 55.0%
! AAAGGCGTAACCATGGCGCT+AGG + chr7_4:52989510-52989529 None:intergenic 55.0%
TAGCGCCATGGTTACGCCTT+TGG - chr7_4:52989509-52989528 Msa1162330:intron 55.0%
! CCACACCAAAGGCGTAACCA+TGG + chr7_4:52989517-52989536 None:intergenic 55.0%
CCATGGTTACGCCTTTGGTG+TGG - chr7_4:52989514-52989533 Msa1162330:intron 55.0%
!! GGCATTTCTGGCCACACCAA+AGG + chr7_4:52989528-52989547 None:intergenic 55.0%
! TCCATCAACCACTCTGGGGA+AGG - chr7_4:52989598-52989617 Msa1162330:CDS 55.0%
! CCATCAACCACTCTGGGGAA+GGG - chr7_4:52989599-52989618 Msa1162330:CDS 55.0%
TCATCTTCCCTTCCCCAGAG+TGG + chr7_4:52989609-52989628 None:intergenic 55.0%
GAGATGGTTCCTACTGCCAC+TGG - chr7_4:52989768-52989787 Msa1162330:intron 55.0%
GAGCGGTCTCAACATTCAGC+AGG - chr7_4:52990169-52990188 Msa1162330:CDS 55.0%
! GAGCTTGCGTTTTCCGGTGC+CGG + chr7_4:52984197-52984216 None:intergenic 60.0%
AGAGCTTCCACCTACGCTGG+CGG - chr7_4:52984232-52984251 Msa1162330:exon 60.0%
GGGAAGCTTCTCACCGTCAC+CGG + chr7_4:52984680-52984699 None:intergenic 60.0%
!! GCATGTGGGTTAGTGTGGGG+TGG - chr7_4:52987529-52987548 Msa1162330:intron 60.0%
!! TGGGTTAGTGTGGGGTGGGT+GGG - chr7_4:52987534-52987553 Msa1162330:intron 60.0%
TTCAGATTGCTCCCCCAGCC+CGG + chr7_4:52988927-52988946 None:intergenic 60.0%
CCCTTCCCCAGAGTGGTTGA+TGG + chr7_4:52989602-52989621 None:intergenic 60.0%
AGTAGCTCCACCGCCAGCGT+AGG + chr7_4:52984245-52984264 None:intergenic 65.0%
CGCGGCGCGTTCAATCAACG+CGG + chr7_4:52984336-52984355 None:intergenic 65.0%
GTTCACGTTCGCGTCCGACG+AGG - chr7_4:52984703-52984722 Msa1162330:CDS 65.0%
GCTGGTCCCAGGTTGCGACA+AGG - chr7_4:52984910-52984929 Msa1162330:intron 65.0%
!! GTGGGTTAGTGTGGGGTGGG+TGG - chr7_4:52987533-52987552 Msa1162330:intron 65.0%
GTTAGTGTGGGGTGGGTGGG+AGG - chr7_4:52987537-52987556 Msa1162330:intron 65.0%
GGGTGGGTGGGAGGTGAGAT+GGG - chr7_4:52987546-52987565 Msa1162330:intron 65.0%
TGGGTGGGAGGTGAGATGGG+AGG - chr7_4:52987549-52987568 Msa1162330:intron 65.0%
GGGTGGGAGGTGAGATGGGA+GGG - chr7_4:52987550-52987569 Msa1162330:intron 65.0%
GGTGGGAGGTGAGATGGGAG+GGG - chr7_4:52987551-52987570 Msa1162330:intron 65.0%
GTGGGAGGTGAGATGGGAGG+GGG - chr7_4:52987552-52987571 Msa1162330:intron 65.0%
GAGGTGAGATGGGAGGGGGT+GGG - chr7_4:52987556-52987575 Msa1162330:intron 65.0%
AGGTGAGATGGGAGGGGGTG+GGG - chr7_4:52987557-52987576 Msa1162330:intron 65.0%
TCAGATTGCTCCCCCAGCCC+GGG + chr7_4:52988926-52988945 None:intergenic 65.0%
!! TATGGTTCCGGCGCCGGCAC+CGG - chr7_4:52984181-52984200 Msa1162330:three_prime_UTR 70.0%
GCTTCCACCTACGCTGGCGG+TGG - chr7_4:52984235-52984254 Msa1162330:exon 70.0%
AGCTCCACCGCCAGCGTAGG+TGG + chr7_4:52984242-52984261 None:intergenic 70.0%
GGGGTGGGTGGGAGGTGAGA+TGG - chr7_4:52987545-52987564 Msa1162330:intron 70.0%
GGAGGTGAGATGGGAGGGGG+TGG - chr7_4:52987555-52987574 Msa1162330:intron 70.0%
!!! GCGTTTTCCGGTGCCGGCGC+CGG + chr7_4:52984191-52984210 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 52983878 52990446 52983878 ID=Msa1162330;Name=Msa1162330
chr7_4 mRNA 52983878 52990446 52983878 ID=Msa1162330-mRNA-1;Parent=Msa1162330;Name=Msa1162330-mRNA-1;_AED=0.07;_eAED=0.07;_QI=226|1|1|1|0.83|0.85|7|362|340
chr7_4 exon 52983878 52984277 52983878 ID=Msa1162330-mRNA-1:exon:15297;Parent=Msa1162330-mRNA-1
chr7_4 exon 52984634 52984844 52984634 ID=Msa1162330-mRNA-1:exon:15296;Parent=Msa1162330-mRNA-1
chr7_4 exon 52985476 52985547 52985476 ID=Msa1162330-mRNA-1:exon:15295;Parent=Msa1162330-mRNA-1
chr7_4 exon 52986124 52986192 52986124 ID=Msa1162330-mRNA-1:exon:15294;Parent=Msa1162330-mRNA-1
chr7_4 exon 52989393 52989458 52989393 ID=Msa1162330-mRNA-1:exon:15293;Parent=Msa1162330-mRNA-1
chr7_4 exon 52989565 52989696 52989565 ID=Msa1162330-mRNA-1:exon:15292;Parent=Msa1162330-mRNA-1
chr7_4 exon 52989786 52990446 52989786 ID=Msa1162330-mRNA-1:exon:15291;Parent=Msa1162330-mRNA-1
chr7_4 five_prime_UTR 52990221 52990446 52990221 ID=Msa1162330-mRNA-1:five_prime_utr;Parent=Msa1162330-mRNA-1
chr7_4 CDS 52989786 52990220 52989786 ID=Msa1162330-mRNA-1:cds;Parent=Msa1162330-mRNA-1
chr7_4 CDS 52989565 52989696 52989565 ID=Msa1162330-mRNA-1:cds;Parent=Msa1162330-mRNA-1
chr7_4 CDS 52989393 52989458 52989393 ID=Msa1162330-mRNA-1:cds;Parent=Msa1162330-mRNA-1
chr7_4 CDS 52986124 52986192 52986124 ID=Msa1162330-mRNA-1:cds;Parent=Msa1162330-mRNA-1
chr7_4 CDS 52985476 52985547 52985476 ID=Msa1162330-mRNA-1:cds;Parent=Msa1162330-mRNA-1
chr7_4 CDS 52984634 52984844 52984634 ID=Msa1162330-mRNA-1:cds;Parent=Msa1162330-mRNA-1
chr7_4 CDS 52984240 52984277 52984240 ID=Msa1162330-mRNA-1:cds;Parent=Msa1162330-mRNA-1
chr7_4 three_prime_UTR 52983878 52984239 52983878 ID=Msa1162330-mRNA-1:three_prime_utr;Parent=Msa1162330-mRNA-1
Gene Sequence

>Msa1162330

ATGGAACAAGCTACAGTAGGATTAAGTGGATCCATTCACGACGATTCTGTTCAATTTGACGAAGAAATTCAAGGAATTATGGTTCCGGCGCCGGCACCGGAAAACGCAAGCTCATTCACCGCACTGTTAGAGCTTCCACCTACGCTGGCGGTGGAGCTACTTCATTTGCCTGAGCAGAAACCCTATCTCCCAAACTCTTCAAACGGAAATTTAACTTTTCCTACTAACGCCGCGTTGATTGAACGCGCCGCGAAATTCTCAGTGTTCGCCGGAGAGAATTCTTCACCGGGAGATGAGCGGCTTTTTCCGGTGGAAAGTGTGAAGAACGAGCCTCAAGAGACTGATTCGAATCCTTGCTCGACGCAAGAGTGTGTTTCGGATCCAGCTGAGAACAAGAATCAGAGAAACGTGAAGAGAAAAGAGCGAGAGAAGAAGGGTAAAGCGTCGTCGTCCAAGAAGAGTAAGACCATCGCCGATGAAACTTCCGGTGACGGTGAGAAGCTTCCCTATGTTCACGTTCGCGTCCGACGAGGTCAAGCCACTGATAGCCATAGCTTGGCAGAACGAGCTAGGAGAGAGAAGATTAATGCTCGTATGAAGCTTTTACAAGAGCTGGTCCCAGGTTGCGACAAGATATCTGGAACGGCGTTGGTTCTGGATGAAATCATCAACCATGTGCAAACTCTACAACGTCAAGTGGAGATCTTATCAATGAAACTGGCAGCTGTTAACCCAAGAATTGATTTCAACTTAGACAGGTTATTGGCTGCTGATGGGTCGTCTTTATTGGACAGTAACTTACCTAGCGCCATGGTTACGCCTTTGGTGTGGCCAGAAATGCCACTCAACAGTAACAGACAGCATTATCAACAACAGTGGCAATTCGATGCATTCCATCAACCACTCTGGGGAAGGGAAGATGACATTCATAATTTCACGACTCCAGAAAACTCACTTTTGAGTTATAACTCCTCAGCAAATTCAGCATCTCTGCACTCAAATCAATTGAAGATGGAGCTCTGA
Protein sequence

>Msa1162330

MEQATVGLSGSIHDDSVQFDEEIQGIMVPAPAPENASSFTALLELPPTLAVELLHLPEQKPYLPNSSNGNLTFPTNAALIERAAKFSVFAGENSSPGDERLFPVESVKNEPQETDSNPCSTQECVSDPAENKNQRNVKRKEREKKGKASSSKKSKTIADETSGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTALVLDEIINHVQTLQRQVEILSMKLAAVNPRIDFNLDRLLAADGSSLLDSNLPSAMVTPLVWPEMPLNSNRQHYQQQWQFDAFHQPLWGREDDIHNFTTPENSLLSYNSSANSASLHSNQLKMEL*