AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1212950


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1212950 MtrunA17_Chr4g0061421 97.031 640 15 3 1 636 1 640 0.0 1252
Msa1212950 MtrunA17_Chr3g0113421 62.500 152 19 3 480 629 9 124 3.18e-30 115
Msa1212950 MtrunA17_Chr7g0269901 31.224 237 111 10 9 230 97 296 1.21e-16 84.0
Msa1212950 MtrunA17_Chr3g0142871 31.224 237 111 10 9 230 97 296 1.52e-16 83.6
Msa1212950 MtrunA17_Chr7g0271891 45.588 68 37 0 8 75 16 83 1.85e-15 74.3
Msa1212950 MtrunA17_Chr8g0344721 53.731 67 29 1 10 74 12 78 4.12e-14 72.4
Msa1212950 MtrunA17_Chr4g0044331 50.000 62 31 0 14 75 18 79 4.85e-13 67.4
Msa1212950 MtrunA17_Chr1g0209551 34.899 149 79 5 2 149 10 141 4.46e-12 68.6
Msa1212950 MtrunA17_Chr6g0460381 50.000 64 31 1 9 71 4 67 3.03e-11 63.2
Msa1212950 MtrunA17_Chr2g0333221 38.462 104 56 2 9 109 71 169 6.89e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1212950 AT1G74250.1 48.988 692 235 16 1 636 1 630 2.12e-178 521
Msa1212950 AT3G11450.1 28.099 242 126 7 2 230 93 299 6.58e-15 78.6
Msa1212950 AT3G14200.1 53.846 65 29 1 10 74 14 77 3.07e-13 70.1
Msa1212950 AT1G56300.2 38.356 73 45 0 2 74 7 79 1.10e-12 65.5
Msa1212950 AT1G56300.1 38.356 73 45 0 2 74 7 79 1.52e-12 66.2
Msa1212950 AT1G71000.2 41.892 74 43 0 1 74 1 74 8.86e-12 64.3
Msa1212950 AT1G71000.1 41.892 74 43 0 1 74 1 74 9.14e-12 64.3
Msa1212950 AT5G25530.2 35.345 116 59 5 9 112 5 116 1.31e-11 67.0
Msa1212950 AT5G06110.1 28.185 259 120 10 9 251 101 309 3.57e-11 66.6
Msa1212950 AT5G06110.2 28.185 259 120 10 9 251 101 309 3.57e-11 66.6
Msa1212950 AT1G59980.2 44.595 74 37 1 6 79 21 90 9.16e-11 64.3
Msa1212950 AT1G59980.1 44.595 74 37 1 6 79 21 90 9.91e-11 64.7

Find 183 sgRNAs with CRISPR-Local

Find 255 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTCCTCTTATGGGGAATT+TGG 0.141158 8_1:-72989116 Msa1212950:CDS
TGTTGCTTCGATAAACAATT+AGG 0.166260 8_1:+72989576 None:intergenic
ACGGAATTAGACTTTGAATT+TGG 0.172659 8_1:+72989301 None:intergenic
CGAAGCCACCGCTCAGTTTC+AGG 0.199966 8_1:-72989410 Msa1212950:CDS
TTCCATTTCACCATTGTTTC+CGG 0.225938 8_1:+72986829 None:intergenic
ATATGCGACTACTTCAATTT+TGG 0.237735 8_1:-72987108 Msa1212950:three_prime_UTR
TATGAAGGTGAAGAAGAATT+TGG 0.247762 8_1:-72988861 Msa1212950:CDS
TTGCTAAGAAATTAGGTTTA+GGG 0.251194 8_1:-72989156 Msa1212950:CDS
TGTTAGACAGGCTCCTCTTA+TGG 0.265835 8_1:-72989125 Msa1212950:CDS
GGCGTTGGAGAGCGAGTTTC+CGG 0.265860 8_1:+72989470 None:intergenic
TTTGCTAAGAAATTAGGTTT+AGG 0.269838 8_1:-72989157 Msa1212950:CDS
TGGCGTTGGGGTTGATGATT+TGG 0.280098 8_1:-72988477 Msa1212950:CDS
GGGTGAGATCTATTGAAATT+TGG 0.291732 8_1:+72986976 None:intergenic
TGATGTGTTTGATAAAATTC+AGG 0.297358 8_1:-72989194 Msa1212950:CDS
AATTGAAGTAGTCGCATATC+TGG 0.303758 8_1:+72987112 None:intergenic
GAGAAGAATGTAATCAATAT+TGG 0.312751 8_1:-72987963 Msa1212950:CDS
GTTCTTGAAACAATGGTATC+TGG 0.319682 8_1:-72988284 Msa1212950:CDS
TTCCGGTAAGGGTTTCTATA+AGG 0.322734 8_1:-72989224 Msa1212950:CDS
GTTGCTTCGATAAACAATTA+GGG 0.333342 8_1:+72989577 None:intergenic
GATGTTGATGATGATGAAAT+TGG 0.336996 8_1:-72988215 Msa1212950:CDS
CCTGATTTGACGAGCTTGTC+AGG 0.337742 8_1:+72989445 None:intergenic
TGTTTAGATATCTAATGTTA+TGG 0.351979 8_1:-72986902 Msa1212950:three_prime_UTR
GTTAGACAGGCTCCTCTTAT+GGG 0.353059 8_1:-72989124 Msa1212950:CDS
ATGTCTATGAAAATAGTTTA+CGG 0.353143 8_1:-72986785 Msa1212950:three_prime_UTR
TTCTTGAATTAGAGAAATCT+TGG 0.357865 8_1:-72987390 Msa1212950:intron
AACCTCCGCGACTTCCTATT+CGG 0.359713 8_1:+72988992 None:intergenic
GTTCATAAGGGTATGGATAC+AGG 0.366618 8_1:-72987005 Msa1212950:three_prime_UTR
AAGAACTCCGATCAGCTTAC+CGG 0.367180 8_1:-72989489 Msa1212950:CDS
GGGCTTGTGTGTTGAAGCAC+TGG 0.368221 8_1:+72988151 None:intergenic
GATGGAGGAAGAGAATAATA+AGG 0.374112 8_1:-72988969 Msa1212950:CDS
TAGGAAGTCGCGGAGGTTGA+TGG 0.374440 8_1:-72988987 Msa1212950:CDS
CTTCTGTCGTCGTCAACCTC+AGG 0.376304 8_1:-72989639 Msa1212950:five_prime_UTR
ATGTTGATGATGATGAAATT+GGG 0.378497 8_1:-72988214 Msa1212950:CDS
CCTGACAAGCTCGTCAAATC+AGG 0.380161 8_1:-72989445 Msa1212950:CDS
TAAGCTGATCGGAGTTCTTC+CGG 0.384438 8_1:+72989493 None:intergenic
TCATCAACCTTAGCCCAATC+AGG 0.385687 8_1:+72988752 None:intergenic
CTGAAACTGAGCGGTGGCTT+CGG 0.388334 8_1:+72989411 None:intergenic
GAAGGAGAGGAAGAGGAAGT+TGG 0.396116 8_1:-72988813 Msa1212950:CDS
AGGAGGAGAAGGAGAGGAAG+AGG 0.399336 8_1:-72988820 Msa1212950:CDS
TCGTACCAAGCTCGTTCCTT+TGG 0.399711 8_1:+72989355 None:intergenic
TATTTATGCCACAGTTCATA+AGG 0.401824 8_1:-72987018 Msa1212950:three_prime_UTR
GAAGAAGATTTCAAATCAAC+CGG 0.408421 8_1:-72987844 Msa1212950:CDS
TGGCTTATGAGGAGCCTGAT+TGG 0.409460 8_1:-72988766 Msa1212950:CDS
GAAACTAATGTGCCTACTAA+TGG 0.414627 8_1:-72987993 Msa1212950:CDS
AAAGTGAGGAGGATGGCGTT+GGG 0.416761 8_1:-72988490 Msa1212950:CDS
GGTGAGGAGGAAGGCGAAGA+GGG 0.422169 8_1:-72988948 Msa1212950:CDS
TTCCGGAAACAATGGTGAAA+TGG 0.422367 8_1:-72986831 Msa1212950:three_prime_UTR
TAAGAGAGTGATTGATATGA+AGG 0.428180 8_1:-72988876 Msa1212950:CDS
TTCTCACTCTCAATTTGAGT+TGG 0.428513 8_1:+72988113 None:intergenic
GGAGAAAGTTGCTGAGTTCA+AGG 0.429185 8_1:-72988594 Msa1212950:CDS
ATCCGAAAACCCCGAAAATA+CGG 0.430044 8_1:+72989246 None:intergenic
TAGTCCTTATGCGCAGGTTA+CGG 0.433863 8_1:-72989092 Msa1212950:CDS
AGGGATTGATTCTGTTAGAC+AGG 0.434136 8_1:-72989137 Msa1212950:CDS
GAAGTTGGAGATGGAGAGGA+AGG 0.434700 8_1:-72988798 Msa1212950:CDS
TTCGAGGAAAATGAGGATAA+TGG 0.435391 8_1:-72987900 Msa1212950:CDS
GCAGAAGACGAGAGTGCAAA+TGG 0.435707 8_1:-72988425 Msa1212950:CDS
GGAGAGGGCTATGGCTTATG+AGG 0.439385 8_1:-72988777 Msa1212950:CDS
AAAGCCGTAACCTGCGCATA+AGG 0.439715 8_1:+72989088 None:intergenic
TAAATTGTAGCTCAGCCTTC+CGG 0.440662 8_1:-72987053 Msa1212950:three_prime_UTR
AGAAGTTGAGGATTTGTATG+AGG 0.441764 8_1:-72988726 Msa1212950:CDS
AACCTTATAGAAACCCTTAC+CGG 0.442360 8_1:+72989222 None:intergenic
CGATGCCACTACGAAGTTCT+CGG 0.443193 8_1:-72989535 Msa1212950:CDS
GGCTTATGAGGAGCCTGATT+GGG 0.449241 8_1:-72988765 Msa1212950:CDS
GAAGAAGAAAGAGGAGGAGA+AGG 0.462080 8_1:-72988831 Msa1212950:CDS
TTCTCATATTTGCCATTAGT+AGG 0.462771 8_1:+72987981 None:intergenic
TGGTATCTGGGCACAAGGGC+CGG 0.463969 8_1:-72988271 Msa1212950:CDS
CGAGCTTGTCAGGGTGGCGT+TGG 0.466381 8_1:+72989455 None:intergenic
AGTTTAAGAGTGAGAAGCAA+TGG 0.469035 8_1:-72988646 Msa1212950:CDS
GAAGGTGAAAGTGAAGGGGT+TGG 0.476024 8_1:-72988527 Msa1212950:CDS
CTATCCAAATTCCCCATAAG+AGG 0.477965 8_1:+72989112 None:intergenic
GAATGATGGGGTTGGTGCTA+TGG 0.478029 8_1:-72988087 Msa1212950:CDS
GTCTAGTTCCCAATATTTCG+AGG 0.480169 8_1:-72987916 Msa1212950:CDS
CCAATATTTCGAGGAAAATG+AGG 0.482316 8_1:-72987907 Msa1212950:CDS
GTTCTTGAAGCAATGCTGGC+TGG 0.482368 8_1:-72988191 Msa1212950:CDS
TGGGGTTCTTGAAGCAATGC+TGG 0.483544 8_1:-72988195 Msa1212950:CDS
GAGGAAGAGGAAGTTGGAGA+TGG 0.484765 8_1:-72988807 Msa1212950:CDS
GAAAGTGAGGAGGATGGCGT+TGG 0.484850 8_1:-72988491 Msa1212950:CDS
ATTTATGCCACAGTTCATAA+GGG 0.489773 8_1:-72987017 Msa1212950:three_prime_UTR
GAATAATAAGGTGAGGAGGA+AGG 0.491971 8_1:-72988957 Msa1212950:CDS
CATAAACATCTGAGCGACTC+TGG 0.492233 8_1:-72987216 Msa1212950:CDS
TGCCACAGTTCATAAGGGTA+TGG 0.496764 8_1:-72987012 Msa1212950:three_prime_UTR
AGTTGGAGTTTCAGAAGCCT+CGG 0.497718 8_1:+72988130 None:intergenic
TCATTGTCACCATCATCATT+CGG 0.500186 8_1:+72988395 None:intergenic
GGCTTGTGTGTTGAAGCACT+GGG 0.501875 8_1:+72988152 None:intergenic
CAGAAGACGAGAGTGCAAAT+GGG 0.506677 8_1:-72988424 Msa1212950:CDS
AGAAAGAGGAGGAGAAGGAG+AGG 0.506886 8_1:-72988826 Msa1212950:CDS
AGAGGAAGTTGGAGATGGAG+AGG 0.510470 8_1:-72988802 Msa1212950:CDS
GCAATGGAATCGAGATCTAT+CGG 0.514559 8_1:-72986759 Msa1212950:three_prime_UTR
AAAATCTGTAATAAGAGTAT+TGG 0.516505 8_1:-72986693 Msa1212950:three_prime_UTR
ACGAGGAAGGTGAAAGTGAA+GGG 0.517150 8_1:-72988532 Msa1212950:CDS
TGTAATAAGAGTATTGGTAC+TGG 0.520881 8_1:-72986687 Msa1212950:three_prime_UTR
GACGAGGAAGGTGAAAGTGA+AGG 0.520922 8_1:-72988533 Msa1212950:CDS
GCAGCAATGAAAAGTCGATA+AGG 0.521221 8_1:-72987189 Msa1212950:exon
GAGAGTGAGAATGAGAATGA+TGG 0.521962 8_1:-72988101 Msa1212950:CDS
GTTTGAGAAGAAAGATGAGA+AGG 0.522115 8_1:-72988696 Msa1212950:CDS
TGAGCAGAGTAAGAAGCATA+AGG 0.522481 8_1:-72988615 Msa1212950:CDS
TGGAGATGGAGAGGAAGGAG+AGG 0.522737 8_1:-72988793 Msa1212950:CDS
GGTTGATGAAGAAGAAGTTG+AGG 0.524241 8_1:-72988738 Msa1212950:CDS
CGAAGCAACAATGGCATCGA+CGG 0.524518 8_1:-72989563 Msa1212950:exon
TTCTGTCGTCGTCAACCTCA+GGG 0.524893 8_1:-72989638 Msa1212950:five_prime_UTR
CATTCTCATCAAAATCAAAC+CGG 0.526287 8_1:+72988252 None:intergenic
TGGATCAGAGAGTACCTCAT+AGG 0.527619 8_1:+72989375 None:intergenic
ATAAATAACATGCTTTCTGC+CGG 0.530799 8_1:+72987034 None:intergenic
CGAGTTTCCGGTAAGCTGAT+CGG 0.532549 8_1:+72989482 None:intergenic
TCGATAAGGAAAATATACTA+AGG 0.533085 8_1:-72987175 Msa1212950:exon
ATTAGACTTTGAATTTGGAT+CGG 0.533157 8_1:+72989306 None:intergenic
TGAGGAGCCTGATTGGGCTA+AGG 0.533690 8_1:-72988759 Msa1212950:CDS
AGGTGAGGAGGAAGGCGAAG+AGG 0.534213 8_1:-72988949 Msa1212950:CDS
TTCTTGAAACAATGGTATCT+GGG 0.534518 8_1:-72988283 Msa1212950:CDS
GGTGAAGAAGAATTTGGAGA+TGG 0.534575 8_1:-72988855 Msa1212950:CDS
AGAGTGAGAATGAGAATGAT+GGG 0.534818 8_1:-72988100 Msa1212950:CDS
AGAGGAAAGATTAGAAAGTG+AGG 0.536511 8_1:-72988504 Msa1212950:CDS
GGAGAGGAAGGAGAGGGCTA+TGG 0.537823 8_1:-72988786 Msa1212950:CDS
AGAGGAGTTAGAAGCTGAAG+TGG 0.540411 8_1:-72988555 Msa1212950:CDS
GGAGATGGAGAAGAAGAAAG+AGG 0.547787 8_1:-72988840 Msa1212950:CDS
TTGAATTTGGATCGGAGAAG+AGG 0.548637 8_1:+72989314 None:intergenic
AATGTAATCAATATTGGAGA+TGG 0.550622 8_1:-72987957 Msa1212950:CDS
GATGAGTATGATGCGATGGC+AGG 0.551327 8_1:-72989016 Msa1212950:CDS
CTGATCCAAAGGAACGAGCT+TGG 0.552512 8_1:-72989360 Msa1212950:CDS
CAATGGAATCGAGATCTATC+GGG 0.552754 8_1:-72986758 Msa1212950:three_prime_UTR
GGAGATGGAGAGGAAGGAGA+GGG 0.552905 8_1:-72988792 Msa1212950:CDS
AGATTAGAAAGTGAGGAGGA+TGG 0.553099 8_1:-72988497 Msa1212950:CDS
GAAGAGGATTTGAGAACGAT+GGG 0.554440 8_1:+72989330 None:intergenic
CGATGATGTTCTTGAAACAA+TGG 0.555739 8_1:-72988291 Msa1212950:CDS
TGAAAGTGAAGGGGTTGGAG+AGG 0.556578 8_1:-72988522 Msa1212950:CDS
GTTGGAGTTTCAGAAGCCTC+GGG 0.557564 8_1:+72988131 None:intergenic
AGAAGAGGATTTGAGAACGA+TGG 0.558151 8_1:+72989329 None:intergenic
AAATAGTTTACGGATGGCAA+TGG 0.559656 8_1:-72986775 Msa1212950:three_prime_UTR
GTTAGAAGCTGAAGTGGACG+AGG 0.565424 8_1:-72988549 Msa1212950:CDS
CGAAAACAGGTCAGGGACAA+CGG 0.566006 8_1:+72989282 None:intergenic
TTTGGATAGTCCTTATGCGC+AGG 0.567782 8_1:-72989098 Msa1212950:CDS
GAGCAAAGAAAGAGAAGGGT+GGG 0.568242 8_1:-72988028 Msa1212950:CDS
AACAATGGTATCTGGGCACA+AGG 0.568483 8_1:-72988276 Msa1212950:CDS
AAGAGAATAATAAGGTGAGG+AGG 0.569009 8_1:-72988961 Msa1212950:CDS
TCTACCTCGCGAATGCTCAC+CGG 0.571563 8_1:-72989512 Msa1212950:CDS
CTGATTTGACGAGCTTGTCA+GGG 0.572375 8_1:+72989446 None:intergenic
GGATTCACTTGATGATGAAG+AGG 0.574101 8_1:-72988573 Msa1212950:CDS
GGAGCTACAACACGCCTATG+AGG 0.575033 8_1:-72989389 Msa1212950:CDS
CGGTGGCTTCGGATTGAGAG+AGG 0.580013 8_1:+72989422 None:intergenic
GGAAAGATTAGAAAGTGAGG+AGG 0.583975 8_1:-72988501 Msa1212950:CDS
AAATGTTATCTGACATAGAG+AGG 0.586987 8_1:+72986955 None:intergenic
ACGTAGAGCAAAGAAAGAGA+AGG 0.595059 8_1:-72988033 Msa1212950:CDS
CTATGAAAATAGTTTACGGA+TGG 0.596236 8_1:-72986781 Msa1212950:three_prime_UTR
GGGGTTGAGCCGAATGATGA+TGG 0.597019 8_1:-72988404 Msa1212950:CDS
ATAACATGCTTTCTGCCGGA+AGG 0.598055 8_1:+72987038 None:intergenic
AGGAAGAGAATAATAAGGTG+AGG 0.601773 8_1:-72988964 Msa1212950:CDS
AAGTGAGGAGGATGGCGTTG+GGG 0.606066 8_1:-72988489 Msa1212950:CDS
ATTTCAAATATATCATCGAG+TGG 0.606505 8_1:-72987145 Msa1212950:three_prime_UTR
CGGTAAAGAGAATGAGCAGG+TGG 0.606870 8_1:-72987877 Msa1212950:CDS
TGAGGTACTCTCTGATCCAA+AGG 0.607381 8_1:-72989371 Msa1212950:CDS
TTCATAAGGGTATGGATACA+GGG 0.609063 8_1:-72987004 Msa1212950:three_prime_UTR
GGCGGATGAGTATGATGCGA+TGG 0.610486 8_1:-72989020 Msa1212950:CDS
CGAGGAAGGTGAAAGTGAAG+GGG 0.611247 8_1:-72988531 Msa1212950:CDS
TTAGACAGGCTCCTCTTATG+GGG 0.611836 8_1:-72989123 Msa1212950:CDS
TAATGATACTGTGAGAAAGT+TGG 0.612128 8_1:-72988921 Msa1212950:CDS
TGGCGGTAAAGAGAATGAGC+AGG 0.613961 8_1:-72987880 Msa1212950:CDS
GAAGCTGAAGTGGACGAGGA+AGG 0.614178 8_1:-72988545 Msa1212950:CDS
ATTGTTTATCGAAGCAACAA+TGG 0.617119 8_1:-72989572 Msa1212950:exon
CGTAGAGCAAAGAAAGAGAA+GGG 0.619612 8_1:-72988032 Msa1212950:CDS
TGTTGATGATGATGAAATTG+GGG 0.621284 8_1:-72988213 Msa1212950:CDS
AGTAGTCGCATATCTGGACC+TGG 0.632829 8_1:+72987118 None:intergenic
GAGAATGAGAATGATGGGGT+TGG 0.635119 8_1:-72988095 Msa1212950:CDS
GTGAGCAGGAGTTTGAGTCA+AGG 0.636045 8_1:-72987350 Msa1212950:intron
ATTTGACGAGCTTGTCAGGG+TGG 0.643119 8_1:+72989449 None:intergenic
GATGGAGAAGAAGAAAGAGG+AGG 0.648465 8_1:-72988837 Msa1212950:CDS
AATGTTATCTGACATAGAGA+GGG 0.649157 8_1:+72986956 None:intergenic
AGAAGACGAGAGTGCAAATG+GGG 0.651811 8_1:-72988423 Msa1212950:CDS
TGCTGAGCATGCAGAAGATG+AGG 0.654863 8_1:-72988360 Msa1212950:CDS
AGAGCAAAGAAAGAGAAGGG+TGG 0.655964 8_1:-72988029 Msa1212950:CDS
ATCCATACCCTTATGAACTG+TGG 0.656114 8_1:+72987010 None:intergenic
TGCTTCAACACACAAGCCCG+AGG 0.660773 8_1:-72988147 Msa1212950:CDS
TAGCTCCTGAAACTGAGCGG+TGG 0.662261 8_1:+72989405 None:intergenic
CAGGTCCGAATAGGAAGTCG+CGG 0.662770 8_1:-72988997 Msa1212950:CDS
GAAGTCGCGGAGGTTGATGG+AGG 0.669800 8_1:-72988984 Msa1212950:CDS
AGATCAAAACTTTCAACCAG+AGG 0.672866 8_1:-72987786 Msa1212950:CDS
ACAATGGTATCTGGGCACAA+GGG 0.680825 8_1:-72988275 Msa1212950:CDS
TCTTCCGGTGAGCATTCGCG+AGG 0.687306 8_1:+72989508 None:intergenic
GGTAAAGAGAATGAGCAGGT+GGG 0.690040 8_1:-72987876 Msa1212950:CDS
GAGGAAAATGAGGATAATGG+CGG 0.690575 8_1:-72987897 Msa1212950:CDS
GAGTGAGAATGAGAATGATG+GGG 0.711594 8_1:-72988099 Msa1212950:CDS
GTCCGAATAGGAAGTCGCGG+AGG 0.733839 8_1:-72988994 Msa1212950:CDS
GTAGACCGAGAACTTCGTAG+TGG 0.735555 8_1:+72989530 None:intergenic
TTGTAGCTCCTGAAACTGAG+CGG 0.736164 8_1:+72989402 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATTTTGCTAAGAAATT+AGG - chr8_1:72987122-72987141 Msa1212950:three_prime_UTR 15.0%
!! TATTCATAAAAACATACATT+TGG + chr8_1:72988532-72988551 None:intergenic 15.0%
!!! TTAATTTTGATGAAATTAAG+AGG - chr8_1:72988701-72988720 Msa1212950:CDS 15.0%
!!! ATTAATAGCAACTATTTTTT+GGG + chr8_1:72989566-72989585 None:intergenic 15.0%
!!! TATTAATAGCAACTATTTTT+TGG + chr8_1:72989567-72989586 None:intergenic 15.0%
!!! AAAAAATAGTTGCTATTAAT+AGG - chr8_1:72989566-72989585 Msa1212950:exon 15.0%
!!! AAAAATAGTTGCTATTAATA+GGG - chr8_1:72989567-72989586 Msa1212950:exon 15.0%
!! AAAAAATTGGAAGTAAAACA+AGG + chr8_1:72988664-72988683 None:intergenic 20.0%
!! ACTTAGTAAAGCAAAAAAAT+TGG + chr8_1:72988677-72988696 None:intergenic 20.0%
!! CAGAATAATAAACAAGAAAA+TGG + chr8_1:72988753-72988772 None:intergenic 20.0%
!!! TTTTCTTGTTTATTATTCTG+TGG - chr8_1:72988753-72988772 Msa1212950:CDS 20.0%
!!! CTTAGTTTTATTTTATTCTC+AGG - chr8_1:72989037-72989056 Msa1212950:CDS 20.0%
!! CTGTAGTAAAAATTAAAGAA+TGG + chr8_1:72989204-72989223 None:intergenic 20.0%
!! TGTTTAGATATCTAATGTTA+TGG - chr8_1:72989383-72989402 Msa1212950:CDS 20.0%
!! ATGTCTATGAAAATAGTTTA+CGG - chr8_1:72989500-72989519 Msa1212950:CDS 20.0%
!!! AAAATCTGTAATAAGAGTAT+TGG - chr8_1:72989592-72989611 Msa1212950:five_prime_UTR 20.0%
! ATTAGACTTTGAATTTGGAT+CGG + chr8_1:72986982-72987001 None:intergenic 25.0%
! TGATGTGTTTGATAAAATTC+AGG - chr8_1:72987091-72987110 Msa1212950:three_prime_UTR 25.0%
! TTTGCTAAGAAATTAGGTTT+AGG - chr8_1:72987128-72987147 Msa1212950:three_prime_UTR 25.0%
! TTGCTAAGAAATTAGGTTTA+GGG - chr8_1:72987129-72987148 Msa1212950:three_prime_UTR 25.0%
!! TTACGGCTTTTTATAGTTAT+TGG - chr8_1:72987210-72987229 Msa1212950:CDS 25.0%
!!! GCTTTTTATAGTTATTGGTT+GGG - chr8_1:72987215-72987234 Msa1212950:CDS 25.0%
!!! TTTGATTTTGATGAGAATGA+TGG - chr8_1:72988037-72988056 Msa1212950:CDS 25.0%
!!! ATGTTGATGATGATGAAATT+GGG - chr8_1:72988071-72988090 Msa1212950:CDS 25.0%
! GAGAAGAATGTAATCAATAT+TGG - chr8_1:72988322-72988341 Msa1212950:CDS 25.0%
! AATGTAATCAATATTGGAGA+TGG - chr8_1:72988328-72988347 Msa1212950:CDS 25.0%
!!! TTTTTTTGCTTTACTAAGTG+TGG - chr8_1:72988678-72988697 Msa1212950:CDS 25.0%
!! TTTTTAAATTCACACATGTG+AGG - chr8_1:72988778-72988797 Msa1212950:CDS 25.0%
! TTCTTGAATTAGAGAAATCT+TGG - chr8_1:72988895-72988914 Msa1212950:CDS 25.0%
! TTGAAATTTGATGAGTAAGA+GGG + chr8_1:72988971-72988990 None:intergenic 25.0%
! TCGATAAGGAAAATATACTA+AGG - chr8_1:72989110-72989129 Msa1212950:CDS 25.0%
! ATTTCAAATATATCATCGAG+TGG - chr8_1:72989140-72989159 Msa1212950:CDS 25.0%
!!! TCTAAACACATGTTTTGTTT+GGG + chr8_1:72989371-72989390 None:intergenic 25.0%
!!! ATCTAAACACATGTTTTGTT+TGG + chr8_1:72989372-72989391 None:intergenic 25.0%
GTTGCTTCGATAAACAATTA+GGG + chr8_1:72986711-72986730 None:intergenic 30.0%
! TGTTGCTTCGATAAACAATT+AGG + chr8_1:72986712-72986731 None:intergenic 30.0%
ATTGTTTATCGAAGCAACAA+TGG - chr8_1:72986713-72986732 Msa1212950:three_prime_UTR 30.0%
ACGGAATTAGACTTTGAATT+TGG + chr8_1:72986987-72987006 None:intergenic 30.0%
TATTCGAGAAAAACGAAAAC+AGG + chr8_1:72987019-72987038 None:intergenic 30.0%
! TTTCTCGAATACCGTATTTT+CGG - chr8_1:72987028-72987047 Msa1212950:three_prime_UTR 30.0%
! GGCTTTTTATAGTTATTGGT+TGG - chr8_1:72987214-72987233 Msa1212950:CDS 30.0%
! GACTGTTATGGATTTTTGTT+GGG - chr8_1:72987244-72987263 Msa1212950:intron 30.0%
TAATGATACTGTGAGAAAGT+TGG - chr8_1:72987364-72987383 Msa1212950:CDS 30.0%
TAAGAGAGTGATTGATATGA+AGG - chr8_1:72987409-72987428 Msa1212950:intron 30.0%
TATGAAGGTGAAGAAGAATT+TGG - chr8_1:72987424-72987443 Msa1212950:intron 30.0%
!!! AGTTTTATTGTGTGTTGTGT+GGG - chr8_1:72987612-72987631 Msa1212950:intron 30.0%
TTCTTGAAACAATGGTATCT+GGG - chr8_1:72988002-72988021 Msa1212950:CDS 30.0%
CATTCTCATCAAAATCAAAC+CGG + chr8_1:72988036-72988055 None:intergenic 30.0%
!! GATGTTGATGATGATGAAAT+TGG - chr8_1:72988070-72988089 Msa1212950:CDS 30.0%
!! TGTTGATGATGATGAAATTG+GGG - chr8_1:72988072-72988091 Msa1212950:CDS 30.0%
!!! GTTTCTTTTTTGCAGGTTTT+CGG + chr8_1:72988234-72988253 None:intergenic 30.0%
TTCTCATATTTGCCATTAGT+AGG + chr8_1:72988307-72988326 None:intergenic 30.0%
! CTCATTTTCCTCGAAATATT+GGG + chr8_1:72988380-72988399 None:intergenic 30.0%
GAAGAAGATTTCAAATCAAC+CGG - chr8_1:72988441-72988460 Msa1212950:CDS 30.0%
!! AATCAACCGGTTGATAAAAA+AGG - chr8_1:72988454-72988473 Msa1212950:CDS 30.0%
!!! GAAGTTCCTTTTTTATCAAC+CGG + chr8_1:72988463-72988482 None:intergenic 30.0%
CAACAACAGTATATTAGAAC+AGG + chr8_1:72988614-72988633 None:intergenic 30.0%
CTGTTCTAATATACTGTTGT+TGG - chr8_1:72988612-72988631 Msa1212950:CDS 30.0%
CTTGAAATTTGATGAGTAAG+AGG + chr8_1:72988972-72988991 None:intergenic 30.0%
TCATCATTGTTTATGTTGTG+AGG - chr8_1:72988998-72989017 Msa1212950:CDS 30.0%
! ATATGCGACTACTTCAATTT+TGG - chr8_1:72989177-72989196 Msa1212950:CDS 30.0%
ATAAATAACATGCTTTCTGC+CGG + chr8_1:72989254-72989273 None:intergenic 30.0%
TATTTATGCCACAGTTCATA+AGG - chr8_1:72989267-72989286 Msa1212950:CDS 30.0%
ATTTATGCCACAGTTCATAA+GGG - chr8_1:72989268-72989287 Msa1212950:CDS 30.0%
AATGTTATCTGACATAGAGA+GGG + chr8_1:72989332-72989351 None:intergenic 30.0%
AAATGTTATCTGACATAGAG+AGG + chr8_1:72989333-72989352 None:intergenic 30.0%
! ATGGAGTTCATTCTATTTTC+CGG - chr8_1:72989437-72989456 Msa1212950:CDS 30.0%
! ATTCTATTTTCCGGAAACAA+TGG - chr8_1:72989446-72989465 Msa1212950:CDS 30.0%
CTATGAAAATAGTTTACGGA+TGG - chr8_1:72989504-72989523 Msa1212950:CDS 30.0%
!! TGTAATAAGAGTATTGGTAC+TGG - chr8_1:72989598-72989617 Msa1212950:five_prime_UTR 30.0%
! TTTTTCTCAAAGTTACCCTG+AGG + chr8_1:72986665-72986684 None:intergenic 35.0%
AGAAAAACGAAAACAGGTCA+GGG + chr8_1:72987013-72987032 None:intergenic 35.0%
! TTCTCGAATACCGTATTTTC+GGG - chr8_1:72987029-72987048 Msa1212950:three_prime_UTR 35.0%
AACCTTATAGAAACCCTTAC+CGG + chr8_1:72987066-72987085 None:intergenic 35.0%
! CGACTGTTATGGATTTTTGT+TGG - chr8_1:72987243-72987262 Msa1212950:intron 35.0%
! TGTTATGGATTTTTGTTGGG+CGG - chr8_1:72987247-72987266 Msa1212950:intron 35.0%
GATGGAGGAAGAGAATAATA+AGG - chr8_1:72987316-72987335 Msa1212950:intron 35.0%
AGGAAGAGAATAATAAGGTG+AGG - chr8_1:72987321-72987340 Msa1212950:intron 35.0%
AAGAGAATAATAAGGTGAGG+AGG - chr8_1:72987324-72987343 Msa1212950:intron 35.0%
AGAAGTTGAGGATTTGTATG+AGG - chr8_1:72987559-72987578 Msa1212950:intron 35.0%
GTTTGAGAAGAAAGATGAGA+AGG - chr8_1:72987589-72987608 Msa1212950:intron 35.0%
!!! GAGTTTTATTGTGTGTTGTG+TGG - chr8_1:72987611-72987630 Msa1212950:intron 35.0%
AGTTTAAGAGTGAGAAGCAA+TGG - chr8_1:72987639-72987658 Msa1212950:intron 35.0%
AGAGGAAAGATTAGAAAGTG+AGG - chr8_1:72987781-72987800 Msa1212950:CDS 35.0%
TCATTGTCACCATCATCATT+CGG + chr8_1:72987893-72987912 None:intergenic 35.0%
CGATGATGTTCTTGAAACAA+TGG - chr8_1:72987994-72988013 Msa1212950:CDS 35.0%
GTTCTTGAAACAATGGTATC+TGG - chr8_1:72988001-72988020 Msa1212950:CDS 35.0%
TTCTCACTCTCAATTTGAGT+TGG + chr8_1:72988175-72988194 None:intergenic 35.0%
AGAGTGAGAATGAGAATGAT+GGG - chr8_1:72988185-72988204 Msa1212950:CDS 35.0%
GAAACTAATGTGCCTACTAA+TGG - chr8_1:72988292-72988311 Msa1212950:CDS 35.0%
! CCTCATTTTCCTCGAAATAT+TGG + chr8_1:72988381-72988400 None:intergenic 35.0%
CCAATATTTCGAGGAAAATG+AGG - chr8_1:72988378-72988397 Msa1212950:CDS 35.0%
TTCGAGGAAAATGAGGATAA+TGG - chr8_1:72988385-72988404 Msa1212950:CDS 35.0%
!! CTGGTTGAAAGTTTTGATCT+GGG + chr8_1:72988499-72988518 None:intergenic 35.0%
!! TCTGGTTGAAAGTTTTGATC+TGG + chr8_1:72988500-72988519 None:intergenic 35.0%
AGATCAAAACTTTCAACCAG+AGG - chr8_1:72988499-72988518 Msa1212950:CDS 35.0%
!!! TACATTTGGTTTTCTTCCTC+TGG + chr8_1:72988518-72988537 None:intergenic 35.0%
CATACATATCTCAGTAGTCA+TGG + chr8_1:72988583-72988602 None:intergenic 35.0%
CTTCTGTTTAATGGAAGACA+TGG + chr8_1:72988837-72988856 None:intergenic 35.0%
GAAATCAGAATAGAGCAGAA+AGG + chr8_1:72988860-72988879 None:intergenic 35.0%
AAATTTGATGAGTAAGAGGG+AGG + chr8_1:72988968-72988987 None:intergenic 35.0%
AATTGAAGTAGTCGCATATC+TGG + chr8_1:72989176-72989195 None:intergenic 35.0%
! TTCATAAGGGTATGGATACA+GGG - chr8_1:72989281-72989300 Msa1212950:CDS 35.0%
GGGTGAGATCTATTGAAATT+TGG + chr8_1:72989312-72989331 None:intergenic 35.0%
TTCCATTTCACCATTGTTTC+CGG + chr8_1:72989459-72989478 None:intergenic 35.0%
AAATAGTTTACGGATGGCAA+TGG - chr8_1:72989510-72989529 Msa1212950:CDS 35.0%
GAAGAGGATTTGAGAACGAT+GGG + chr8_1:72986958-72986977 None:intergenic 40.0%
AGAAGAGGATTTGAGAACGA+TGG + chr8_1:72986959-72986978 None:intergenic 40.0%
TTGAATTTGGATCGGAGAAG+AGG + chr8_1:72986974-72986993 None:intergenic 40.0%
GAGAAAAACGAAAACAGGTC+AGG + chr8_1:72987014-72987033 None:intergenic 40.0%
! TCTCGAATACCGTATTTTCG+GGG - chr8_1:72987030-72987049 Msa1212950:three_prime_UTR 40.0%
!! TACCGTATTTTCGGGGTTTT+CGG - chr8_1:72987037-72987056 Msa1212950:three_prime_UTR 40.0%
ATCCGAAAACCCCGAAAATA+CGG + chr8_1:72987042-72987061 None:intergenic 40.0%
TTCCGGTAAGGGTTTCTATA+AGG - chr8_1:72987061-72987080 Msa1212950:three_prime_UTR 40.0%
! AGGGATTGATTCTGTTAGAC+AGG - chr8_1:72987148-72987167 Msa1212950:three_prime_UTR 40.0%
CTATCCAAATTCCCCATAAG+AGG + chr8_1:72987176-72987195 None:intergenic 40.0%
! GTTGGGATTTTCGACTGTTA+TGG - chr8_1:72987232-72987251 Msa1212950:intron 40.0%
GAATAATAAGGTGAGGAGGA+AGG - chr8_1:72987328-72987347 Msa1212950:intron 40.0%
!! TGGCTGATTTTGTGAAGAAG+AGG - chr8_1:72987384-72987403 Msa1212950:intron 40.0%
!! GGCTGATTTTGTGAAGAAGA+GGG - chr8_1:72987385-72987404 Msa1212950:intron 40.0%
GGTGAAGAAGAATTTGGAGA+TGG - chr8_1:72987430-72987449 Msa1212950:intron 40.0%
!! GGTTGATGAAGAAGAAGTTG+AGG - chr8_1:72987547-72987566 Msa1212950:intron 40.0%
! TGAGCAGAGTAAGAAGCATA+AGG - chr8_1:72987670-72987689 Msa1212950:intron 40.0%
!! GGATTCACTTGATGATGAAG+AGG - chr8_1:72987712-72987731 Msa1212950:intron 40.0%
GGAAAGATTAGAAAGTGAGG+AGG - chr8_1:72987784-72987803 Msa1212950:CDS 40.0%
AGATTAGAAAGTGAGGAGGA+TGG - chr8_1:72987788-72987807 Msa1212950:CDS 40.0%
GAGAGTGAGAATGAGAATGA+TGG - chr8_1:72988184-72988203 Msa1212950:CDS 40.0%
GAGTGAGAATGAGAATGATG+GGG - chr8_1:72988186-72988205 Msa1212950:CDS 40.0%
!!! GCTCTACGTTTCTTTTTTGC+AGG + chr8_1:72988241-72988260 None:intergenic 40.0%
ACGTAGAGCAAAGAAAGAGA+AGG - chr8_1:72988252-72988271 Msa1212950:CDS 40.0%
CGTAGAGCAAAGAAAGAGAA+GGG - chr8_1:72988253-72988272 Msa1212950:CDS 40.0%
AAAGAGAAGGGTGGGAAAAA+TGG - chr8_1:72988265-72988284 Msa1212950:CDS 40.0%
AAGAGAAGGGTGGGAAAAAT+GGG - chr8_1:72988266-72988285 Msa1212950:CDS 40.0%
! GTCTAGTTCCCAATATTTCG+AGG - chr8_1:72988369-72988388 Msa1212950:CDS 40.0%
! GAGGAAAATGAGGATAATGG+CGG - chr8_1:72988388-72988407 Msa1212950:CDS 40.0%
ACAACATAGCAACGTTATCC+TGG + chr8_1:72988811-72988830 None:intergenic 40.0%
GCAGAAAGGCTTCTGTTTAA+TGG + chr8_1:72988846-72988865 None:intergenic 40.0%
GCAGCAATGAAAAGTCGATA+AGG - chr8_1:72989096-72989115 Msa1212950:CDS 40.0%
! ATATCATCGAGTGGTTTTCC+AGG - chr8_1:72989149-72989168 Msa1212950:CDS 40.0%
TAAATTGTAGCTCAGCCTTC+CGG - chr8_1:72989232-72989251 Msa1212950:CDS 40.0%
ATCCATACCCTTATGAACTG+TGG + chr8_1:72989278-72989297 None:intergenic 40.0%
! GTTCATAAGGGTATGGATAC+AGG - chr8_1:72989280-72989299 Msa1212950:CDS 40.0%
!!! GTTTTTCTAGAGTGACGAGA+TGG - chr8_1:72989418-72989437 Msa1212950:CDS 40.0%
TTCCGGAAACAATGGTGAAA+TGG - chr8_1:72989454-72989473 Msa1212950:CDS 40.0%
GCAATGGAATCGAGATCTAT+CGG - chr8_1:72989526-72989545 Msa1212950:CDS 40.0%
CAATGGAATCGAGATCTATC+GGG - chr8_1:72989527-72989546 Msa1212950:CDS 40.0%
TAAGCTGATCGGAGTTCTTC+CGG + chr8_1:72986795-72986814 None:intergenic 45.0%
AAGAACTCCGATCAGCTTAC+CGG - chr8_1:72986796-72986815 Msa1212950:three_prime_UTR 45.0%
! CTGATTTGACGAGCTTGTCA+GGG + chr8_1:72986842-72986861 None:intergenic 45.0%
TTGTAGCTCCTGAAACTGAG+CGG + chr8_1:72986886-72986905 None:intergenic 45.0%
!! TGGATCAGAGAGTACCTCAT+AGG + chr8_1:72986913-72986932 None:intergenic 45.0%
! TGAGGTACTCTCTGATCCAA+AGG - chr8_1:72986914-72986933 Msa1212950:three_prime_UTR 45.0%
!! TTTTCGGGGTTTTCGGATTC+CGG - chr8_1:72987044-72987063 Msa1212950:three_prime_UTR 45.0%
TGTTAGACAGGCTCCTCTTA+TGG - chr8_1:72987160-72987179 Msa1212950:three_prime_UTR 45.0%
GTTAGACAGGCTCCTCTTAT+GGG - chr8_1:72987161-72987180 Msa1212950:three_prime_UTR 45.0%
TTAGACAGGCTCCTCTTATG+GGG - chr8_1:72987162-72987181 Msa1212950:three_prime_UTR 45.0%
TTTGGATAGTCCTTATGCGC+AGG - chr8_1:72987187-72987206 Msa1212950:exon 45.0%
TAGTCCTTATGCGCAGGTTA+CGG - chr8_1:72987193-72987212 Msa1212950:CDS 45.0%
GGAGATGGAGAAGAAGAAAG+AGG - chr8_1:72987445-72987464 Msa1212950:intron 45.0%
GATGGAGAAGAAGAAAGAGG+AGG - chr8_1:72987448-72987467 Msa1212950:intron 45.0%
GAAGAAGAAAGAGGAGGAGA+AGG - chr8_1:72987454-72987473 Msa1212950:intron 45.0%
TCATCAACCTTAGCCCAATC+AGG + chr8_1:72987536-72987555 None:intergenic 45.0%
GGAGAAAGTTGCTGAGTTCA+AGG - chr8_1:72987691-72987710 Msa1212950:intron 45.0%
AGAGGAGTTAGAAGCTGAAG+TGG - chr8_1:72987730-72987749 Msa1212950:intron 45.0%
ACGAGGAAGGTGAAAGTGAA+GGG - chr8_1:72987753-72987772 Msa1212950:intron 45.0%
! CAGAAGACGAGAGTGCAAAT+GGG - chr8_1:72987861-72987880 Msa1212950:CDS 45.0%
! AGAAGACGAGAGTGCAAATG+GGG - chr8_1:72987862-72987881 Msa1212950:CDS 45.0%
AACAATGGTATCTGGGCACA+AGG - chr8_1:72988009-72988028 Msa1212950:CDS 45.0%
ACAATGGTATCTGGGCACAA+GGG - chr8_1:72988010-72988029 Msa1212950:CDS 45.0%
AGTTGGAGTTTCAGAAGCCT+CGG + chr8_1:72988158-72988177 None:intergenic 45.0%
! GAGAATGAGAATGATGGGGT+TGG - chr8_1:72988190-72988209 Msa1212950:CDS 45.0%
AGAGCAAAGAAAGAGAAGGG+TGG - chr8_1:72988256-72988275 Msa1212950:CDS 45.0%
GAGCAAAGAAAGAGAAGGGT+GGG - chr8_1:72988257-72988276 Msa1212950:CDS 45.0%
AGAGAAGGGTGGGAAAAATG+GGG - chr8_1:72988267-72988286 Msa1212950:CDS 45.0%
GGTAAAGAGAATGAGCAGGT+GGG - chr8_1:72988409-72988428 Msa1212950:CDS 45.0%
GCACAATACAGGAACAGAAC+AGG + chr8_1:72988561-72988580 None:intergenic 45.0%
CAGTAGTCATGGCACAATAC+AGG + chr8_1:72988572-72988591 None:intergenic 45.0%
! TTTTTGCGAGACATGTGAGC+AGG - chr8_1:72988921-72988940 Msa1212950:CDS 45.0%
CATAAACATCTGAGCGACTC+TGG - chr8_1:72989069-72989088 Msa1212950:CDS 45.0%
ATAACATGCTTTCTGCCGGA+AGG + chr8_1:72989250-72989269 None:intergenic 45.0%
TGCCACAGTTCATAAGGGTA+TGG - chr8_1:72989273-72989292 Msa1212950:CDS 45.0%
TTCTGTCGTCGTCAACCTCA+GGG - chr8_1:72986647-72986666 Msa1212950:three_prime_UTR 50.0%
! CGAAGCAACAATGGCATCGA+CGG - chr8_1:72986722-72986741 Msa1212950:three_prime_UTR 50.0%
CGATGCCACTACGAAGTTCT+CGG - chr8_1:72986750-72986769 Msa1212950:three_prime_UTR 50.0%
GTAGACCGAGAACTTCGTAG+TGG + chr8_1:72986758-72986777 None:intergenic 50.0%
CGAGTTTCCGGTAAGCTGAT+CGG + chr8_1:72986806-72986825 None:intergenic 50.0%
ATTTGACGAGCTTGTCAGGG+TGG + chr8_1:72986839-72986858 None:intergenic 50.0%
! CCTGATTTGACGAGCTTGTC+AGG + chr8_1:72986843-72986862 None:intergenic 50.0%
CCTGACAAGCTCGTCAAATC+AGG - chr8_1:72986840-72986859 Msa1212950:three_prime_UTR 50.0%
CTGATCCAAAGGAACGAGCT+TGG - chr8_1:72986925-72986944 Msa1212950:three_prime_UTR 50.0%
TCGTACCAAGCTCGTTCCTT+TGG + chr8_1:72986933-72986952 None:intergenic 50.0%
CGAAAACAGGTCAGGGACAA+CGG + chr8_1:72987006-72987025 None:intergenic 50.0%
! GGGTTTTCGGATTCCGGTAA+GGG - chr8_1:72987050-72987069 Msa1212950:three_prime_UTR 50.0%
GGCTCCTCTTATGGGGAATT+TGG - chr8_1:72987169-72987188 Msa1212950:three_prime_UTR 50.0%
AAAGCCGTAACCTGCGCATA+AGG + chr8_1:72987200-72987219 None:intergenic 50.0%
GATGAGTATGATGCGATGGC+AGG - chr8_1:72987269-72987288 Msa1212950:intron 50.0%
AACCTCCGCGACTTCCTATT+CGG + chr8_1:72987296-72987315 None:intergenic 50.0%
AGAAAGAGGAGGAGAAGGAG+AGG - chr8_1:72987459-72987478 Msa1212950:intron 50.0%
GAAGGAGAGGAAGAGGAAGT+TGG - chr8_1:72987472-72987491 Msa1212950:intron 50.0%
GAGGAAGAGGAAGTTGGAGA+TGG - chr8_1:72987478-72987497 Msa1212950:intron 50.0%
AGAGGAAGTTGGAGATGGAG+AGG - chr8_1:72987483-72987502 Msa1212950:intron 50.0%
GAAGTTGGAGATGGAGAGGA+AGG - chr8_1:72987487-72987506 Msa1212950:intron 50.0%
TGGCTTATGAGGAGCCTGAT+TGG - chr8_1:72987519-72987538 Msa1212950:intron 50.0%
GGCTTATGAGGAGCCTGATT+GGG - chr8_1:72987520-72987539 Msa1212950:intron 50.0%
GTTAGAAGCTGAAGTGGACG+AGG - chr8_1:72987736-72987755 Msa1212950:intron 50.0%
GACGAGGAAGGTGAAAGTGA+AGG - chr8_1:72987752-72987771 Msa1212950:intron 50.0%
CGAGGAAGGTGAAAGTGAAG+GGG - chr8_1:72987754-72987773 Msa1212950:intron 50.0%
GAAGGTGAAAGTGAAGGGGT+TGG - chr8_1:72987758-72987777 Msa1212950:intron 50.0%
TGAAAGTGAAGGGGTTGGAG+AGG - chr8_1:72987763-72987782 Msa1212950:intron 50.0%
AAAGTGAGGAGGATGGCGTT+GGG - chr8_1:72987795-72987814 Msa1212950:CDS 50.0%
!! TGGCGTTGGGGTTGATGATT+TGG - chr8_1:72987808-72987827 Msa1212950:CDS 50.0%
! GCAGAAGACGAGAGTGCAAA+TGG - chr8_1:72987860-72987879 Msa1212950:CDS 50.0%
TGCTGAGCATGCAGAAGATG+AGG - chr8_1:72987925-72987944 Msa1212950:CDS 50.0%
TGGGGTTCTTGAAGCAATGC+TGG - chr8_1:72988090-72988109 Msa1212950:CDS 50.0%
GTTCTTGAAGCAATGCTGGC+TGG - chr8_1:72988094-72988113 Msa1212950:CDS 50.0%
! GGCTTGTGTGTTGAAGCACT+GGG + chr8_1:72988136-72988155 None:intergenic 50.0%
GTTGGAGTTTCAGAAGCCTC+GGG + chr8_1:72988157-72988176 None:intergenic 50.0%
!! GAATGATGGGGTTGGTGCTA+TGG - chr8_1:72988198-72988217 Msa1212950:CDS 50.0%
TGGCGGTAAAGAGAATGAGC+AGG - chr8_1:72988405-72988424 Msa1212950:CDS 50.0%
CGGTAAAGAGAATGAGCAGG+TGG - chr8_1:72988408-72988427 Msa1212950:CDS 50.0%
GTGAGCAGGAGTTTGAGTCA+AGG - chr8_1:72988935-72988954 Msa1212950:CDS 50.0%
AGTAGTCGCATATCTGGACC+TGG + chr8_1:72989170-72989189 None:intergenic 50.0%
CTTCTGTCGTCGTCAACCTC+AGG - chr8_1:72986646-72986665 Msa1212950:three_prime_UTR 55.0%
TCTACCTCGCGAATGCTCAC+CGG - chr8_1:72986773-72986792 Msa1212950:three_prime_UTR 55.0%
CTGAAACTGAGCGGTGGCTT+CGG + chr8_1:72986877-72986896 None:intergenic 55.0%
TAGCTCCTGAAACTGAGCGG+TGG + chr8_1:72986883-72986902 None:intergenic 55.0%
GGAGCTACAACACGCCTATG+AGG - chr8_1:72986896-72986915 Msa1212950:three_prime_UTR 55.0%
! GGGGTTTTCGGATTCCGGTA+AGG - chr8_1:72987049-72987068 Msa1212950:three_prime_UTR 55.0%
GGCGGATGAGTATGATGCGA+TGG - chr8_1:72987265-72987284 Msa1212950:intron 55.0%
ATGCGATGGCAGGTCCGAAT+AGG - chr8_1:72987279-72987298 Msa1212950:intron 55.0%
CAGGTCCGAATAGGAAGTCG+CGG - chr8_1:72987288-72987307 Msa1212950:intron 55.0%
TAGGAAGTCGCGGAGGTTGA+TGG - chr8_1:72987298-72987317 Msa1212950:intron 55.0%
AGGAGGAGAAGGAGAGGAAG+AGG - chr8_1:72987465-72987484 Msa1212950:intron 55.0%
TGGAGATGGAGAGGAAGGAG+AGG - chr8_1:72987492-72987511 Msa1212950:intron 55.0%
GGAGATGGAGAGGAAGGAGA+GGG - chr8_1:72987493-72987512 Msa1212950:intron 55.0%
GGAGAGGGCTATGGCTTATG+AGG - chr8_1:72987508-72987527 Msa1212950:intron 55.0%
TGAGGAGCCTGATTGGGCTA+AGG - chr8_1:72987526-72987545 Msa1212950:intron 55.0%
GAAGCTGAAGTGGACGAGGA+AGG - chr8_1:72987740-72987759 Msa1212950:intron 55.0%
GAAAGTGAGGAGGATGGCGT+TGG - chr8_1:72987794-72987813 Msa1212950:CDS 55.0%
AAGTGAGGAGGATGGCGTTG+GGG - chr8_1:72987796-72987815 Msa1212950:CDS 55.0%
GGGGTTGAGCCGAATGATGA+TGG - chr8_1:72987881-72987900 Msa1212950:CDS 55.0%
GGGCTTGTGTGTTGAAGCAC+TGG + chr8_1:72988137-72988156 None:intergenic 55.0%
TGCTTCAACACACAAGCCCG+AGG - chr8_1:72988138-72988157 Msa1212950:CDS 55.0%
CACATGTGAGGCATGTAGCC+AGG - chr8_1:72988790-72988809 Msa1212950:CDS 55.0%
TCTTCCGGTGAGCATTCGCG+AGG + chr8_1:72986780-72986799 None:intergenic 60.0%
! GGCGTTGGAGAGCGAGTTTC+CGG + chr8_1:72986818-72986837 None:intergenic 60.0%
CGGTGGCTTCGGATTGAGAG+AGG + chr8_1:72986866-72986885 None:intergenic 60.0%
CGAAGCCACCGCTCAGTTTC+AGG - chr8_1:72986875-72986894 Msa1212950:three_prime_UTR 60.0%
GTCCGAATAGGAAGTCGCGG+AGG - chr8_1:72987291-72987310 Msa1212950:intron 60.0%
!! GAAGTCGCGGAGGTTGATGG+AGG - chr8_1:72987301-72987320 Msa1212950:intron 60.0%
AGGTGAGGAGGAAGGCGAAG+AGG - chr8_1:72987336-72987355 Msa1212950:intron 60.0%
GGTGAGGAGGAAGGCGAAGA+GGG - chr8_1:72987337-72987356 Msa1212950:intron 60.0%
GGAGAGGAAGGAGAGGGCTA+TGG - chr8_1:72987499-72987518 Msa1212950:intron 60.0%
TGGTATCTGGGCACAAGGGC+CGG - chr8_1:72988014-72988033 Msa1212950:CDS 60.0%
CGAGCTTGTCAGGGTGGCGT+TGG + chr8_1:72986833-72986852 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 72986641 72989666 72986641 ID=Msa1212950;Name=Msa1212950
chr8_1 mRNA 72986641 72989666 72986641 ID=Msa1212950-mRNA-1;Parent=Msa1212950;Name=Msa1212950-mRNA-1;_AED=0.06;_eAED=0.06;_QI=91|1|1|1|1|1|3|550|636
chr8_1 exon 72986641 72987248 72986641 ID=Msa1212950-mRNA-1:exon:24725;Parent=Msa1212950-mRNA-1
chr8_1 exon 72987351 72987400 72987351 ID=Msa1212950-mRNA-1:exon:24724;Parent=Msa1212950-mRNA-1
chr8_1 exon 72987773 72989666 72987773 ID=Msa1212950-mRNA-1:exon:24723;Parent=Msa1212950-mRNA-1
chr8_1 five_prime_UTR 72989576 72989666 72989576 ID=Msa1212950-mRNA-1:five_prime_utr;Parent=Msa1212950-mRNA-1
chr8_1 CDS 72987773 72989575 72987773 ID=Msa1212950-mRNA-1:cds;Parent=Msa1212950-mRNA-1
chr8_1 CDS 72987351 72987400 72987351 ID=Msa1212950-mRNA-1:cds;Parent=Msa1212950-mRNA-1
chr8_1 CDS 72987191 72987248 72987191 ID=Msa1212950-mRNA-1:cds;Parent=Msa1212950-mRNA-1
chr8_1 three_prime_UTR 72986641 72987190 72986641 ID=Msa1212950-mRNA-1:three_prime_utr;Parent=Msa1212950-mRNA-1
Gene Sequence

>Msa1212950

ATGGCATCGACGGCGAAGCGATGCCACTACGAAGTTCTCGGTCTACCTCGCGAATGCTCACCGGAAGAACTCCGATCAGCTTACCGGAAACTCGCTCTCCAACGCCACCCTGACAAGCTCGTCAAATCAGGCCTCTCTCAATCCGAAGCCACCGCTCAGTTTCAGGAGCTACAACACGCCTATGAGGTACTCTCTGATCCAAAGGAACGAGCTTGGTACGATTCCCATCGTTCTCAAATCCTCTTCTCCGATCCAAATTCAAAGTCTAATTCCGTTGTCCCTGACCTGTTTTCGTTTTTCTCGAATACCGTATTTTCGGGGTTTTCGGATTCCGGTAAGGGTTTCTATAAGGTTTATTCTGATGTGTTTGATAAAATTCAGGCGAATGAGATTAATTTTGCTAAGAAATTAGGTTTAGGGATTGATTCTGTTAGACAGGCTCCTCTTATGGGGAATTTGGATAGTCCTTATGCGCAGGTTACGGCTTTTTATAGTTATTGGTTGGGATTTTCGACTGTTATGGATTTTTGTTGGGCGGATGAGTATGATGCGATGGCAGGTCCGAATAGGAAGTCGCGGAGGTTGATGGAGGAAGAGAATAATAAGGTGAGGAGGAAGGCGAAGAGGGAGTATAATGATACTGTGAGAAAGTTGGCTGATTTTGTGAAGAAGAGGGATAAGAGAGTGATTGATATGAAGGTGAAGAAGAATTTGGAGATGGAGAAGAAGAAAGAGGAGGAGAAGGAGAGGAAGAGGAAGTTGGAGATGGAGAGGAAGGAGAGGGCTATGGCTTATGAGGAGCCTGATTGGGCTAAGGTTGATGAAGAAGAAGTTGAGGATTTGTATGAGGATGATGAGTTTGAGAAGAAAGATGAGAAGGAGTTTTATTGTGTGTTGTGTGGGAAGAAGTTTAAGAGTGAGAAGCAATGGAAGAATCATGAGCAGAGTAAGAAGCATAAGGAGAAAGTTGCTGAGTTCAAGGATTCACTTGATGATGAAGAGGAGTTAGAAGCTGAAGTGGACGAGGAAGGTGAAAGTGAAGGGGTTGGAGAGGAAAGATTAGAAAGTGAGGAGGATGGCGTTGGGGTTGATGATTTGGAAGAGAGAATTCGAGACAGTCTTAATGTTGCAGAAGACGAGAGTGCAAATGGGGTTGAGCCGAATGATGATGGTGACAATGATGAATTTTTTGATGCTGAGCATGCAGAAGATGAGGAGTTTGATGCGTCAGTTGATTTTGTTGTTAATGACGATGACGACGACGATGATGTTCTTGAAACAATGGTATCTGGGCACAAGGGCCGGTTTGATTTTGATGAGAATGATGGCAACGATGATGATGTTGATGATGATGAAATTGGGGTTCTTGAAGCAATGCTGGCTGGACGTAAGAGCAGAAAACCCAGTGCTTCAACACACAAGCCCGAGGCTTCTGAAACTCCAACTCAAATTGAGAGTGAGAATGAGAATGATGGGGTTGGTGCTATGGAATATAACAACCGAAAACCTGCAAAAAAGAAACGTAGAGCAAAGAAAGAGAAGGGTGGGAAAAATGGGGATGAAACTAATGTGCCTACTAATGGCAAATATGAGAAGAATGTAATCAATATTGGAGATGGCGATTCTTATGCACAAGAGTCTAGTTCCCAATATTTCGAGGAAAATGAGGATAATGGCGGTAAAGAGAATGAGCAGGTGGGTAGAGATAAGAAGAAGATTTCAAATCAACCGGTTGATAAAAAAGGAACTTCAAAGAACACAAAACCCAGATCAAAACTTTCAACCAGAGGAAGAAAACCAAATAGAAATCTTGGTCATTTTTGCGAGACATGTGAGCAGGAGTTTGAGTCAAGGAATAAGTTACATAAACATCTGAGCGACTCTGGACATGCAGCAATGAAAAGTCGATAA

Protein sequence

>Msa1212950

MASTAKRCHYEVLGLPRECSPEELRSAYRKLALQRHPDKLVKSGLSQSEATAQFQELQHAYEVLSDPKERAWYDSHRSQILFSDPNSKSNSVVPDLFSFFSNTVFSGFSDSGKGFYKVYSDVFDKIQANEINFAKKLGLGIDSVRQAPLMGNLDSPYAQVTAFYSYWLGFSTVMDFCWADEYDAMAGPNRKSRRLMEEENNKVRRKAKREYNDTVRKLADFVKKRDKRVIDMKVKKNLEMEKKKEEEKERKRKLEMERKERAMAYEEPDWAKVDEEEVEDLYEDDEFEKKDEKEFYCVLCGKKFKSEKQWKNHEQSKKHKEKVAEFKDSLDDEEELEAEVDEEGESEGVGEERLESEEDGVGVDDLEERIRDSLNVAEDESANGVEPNDDGDNDEFFDAEHAEDEEFDASVDFVVNDDDDDDDVLETMVSGHKGRFDFDENDGNDDDVDDDEIGVLEAMLAGRKSRKPSASTHKPEASETPTQIESENENDGVGAMEYNNRKPAKKKRRAKKEKGGKNGDETNVPTNGKYEKNVINIGDGDSYAQESSSQYFEENEDNGGKENEQVGRDKKKISNQPVDKKGTSKNTKPRSKLSTRGRKPNRNLGHFCETCEQEFESRNKLHKHLSDSGHAAMKSR*