Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296150 | XP_003629590.2 | 98.413 | 252 | 4 | 0 | 1 | 252 | 1 | 252 | 0.0 | 513 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296150 | sp|P71534|MABA_MYCS2 | 29.189 | 185 | 112 | 4 | 14 | 197 | 28 | 194 | 1.43e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296150 | A0A396GMH5 | 98.413 | 252 | 4 | 0 | 1 | 252 | 1 | 252 | 0.0 | 513 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0035090 | Msa1296150 | 0.809859 | 1.536112e-50 | -8.615850e-47 |
| Msa0037110 | Msa1296150 | 0.808045 | 3.754965e-50 | -8.615850e-47 |
| Msa0046860 | Msa1296150 | 0.807401 | 5.147148e-50 | -8.615850e-47 |
| Msa0047630 | Msa1296150 | 0.809555 | 1.786198e-50 | -8.615850e-47 |
| Msa0053260 | Msa1296150 | 0.805196 | 1.500536e-49 | -8.615850e-47 |
| Msa0054110 | Msa1296150 | 0.800327 | 1.517866e-48 | -8.615850e-47 |
| Msa0078110 | Msa1296150 | 0.810024 | 1.415394e-50 | -8.615850e-47 |
| Msa0083570 | Msa1296150 | 0.800208 | 1.605467e-48 | -8.615850e-47 |
| Msa0098500 | Msa1296150 | 0.802914 | 4.474575e-49 | -8.615850e-47 |
| Msa0098750 | Msa1296150 | 0.814842 | 1.253835e-51 | -8.615850e-47 |
| Msa0606250 | Msa1296150 | 0.816208 | 6.225584e-52 | -8.615850e-47 |
| Msa0608280 | Msa1296150 | 0.847890 | 8.686594e-60 | -8.615850e-47 |
| Msa0619480 | Msa1296150 | 0.834829 | 2.390487e-56 | -8.615850e-47 |
| Msa0648840 | Msa1296150 | 0.813495 | 2.486468e-51 | -8.615850e-47 |
| Msa0654400 | Msa1296150 | 0.800577 | 1.350000e-48 | -8.615850e-47 |
| Msa0654500 | Msa1296150 | 0.813972 | 1.952258e-51 | -8.615850e-47 |
| Msa0656570 | Msa1296150 | 0.802391 | 5.737472e-49 | -8.615850e-47 |
| Msa0659640 | Msa1296150 | 0.816059 | 6.721510e-52 | -8.615850e-47 |
| Msa0665010 | Msa1296150 | 0.807109 | 5.935002e-50 | -8.615850e-47 |
| Msa0667710 | Msa1296150 | 0.808759 | 2.644951e-50 | -8.615850e-47 |
| Msa0681100 | Msa1296150 | 0.805608 | 1.229794e-49 | -8.615850e-47 |
| Msa0690100 | Msa1296150 | 0.803627 | 3.184501e-49 | -8.615850e-47 |
| Msa0691350 | Msa1296150 | 0.840335 | 9.253707e-58 | -8.615850e-47 |
| Msa0700870 | Msa1296150 | 0.801572 | 8.451097e-49 | -8.615850e-47 |
| Msa0704750 | Msa1296150 | 0.826002 | 3.444031e-54 | -8.615850e-47 |
| Msa0707870 | Msa1296150 | 0.829788 | 4.231130e-55 | -8.615850e-47 |
| Msa0712580 | Msa1296150 | 0.816426 | 5.562975e-52 | -8.615850e-47 |
| Msa0713590 | Msa1296150 | 0.840596 | 7.904913e-58 | -8.615850e-47 |
| Msa0714230 | Msa1296150 | 0.829489 | 5.002015e-55 | -8.615850e-47 |
| Msa0742690 | Msa1296150 | 0.825395 | 4.799067e-54 | -8.615850e-47 |
| Msa0745270 | Msa1296150 | 0.809668 | 1.688973e-50 | -8.615850e-47 |
| Msa0747660 | Msa1296150 | 0.833783 | 4.373727e-56 | -8.615850e-47 |
| Msa0749130 | Msa1296150 | 0.839731 | 1.329257e-57 | -8.615850e-47 |
| Msa0755530 | Msa1296150 | 0.840718 | 7.346619e-58 | -8.615850e-47 |
| Msa0779830 | Msa1296150 | 0.811872 | 5.632545e-51 | -8.615850e-47 |
| Msa0797210 | Msa1296150 | 0.834446 | 2.983120e-56 | -8.615850e-47 |
| Msa0800400 | Msa1296150 | 0.816607 | 5.067631e-52 | -8.615850e-47 |
| Msa0808500 | Msa1296150 | 0.803112 | 4.072054e-49 | -8.615850e-47 |
| Msa0821490 | Msa1296150 | 0.804844 | 1.777170e-49 | -8.615850e-47 |
| Msa0827560 | Msa1296150 | 0.826561 | 2.535955e-54 | -8.615850e-47 |
| Msa0835070 | Msa1296150 | 0.844971 | 5.430531e-59 | -8.615850e-47 |
| Msa0121980 | Msa1296150 | 0.804932 | 1.703568e-49 | -8.615850e-47 |
| Msa0128840 | Msa1296150 | 0.837328 | 5.546558e-57 | -8.615850e-47 |
| Msa0130120 | Msa1296150 | 0.814363 | 1.600546e-51 | -8.615850e-47 |
| Msa0136520 | Msa1296150 | 0.808261 | 3.378228e-50 | -8.615850e-47 |
| Msa0138380 | Msa1296150 | 0.816016 | 6.871473e-52 | -8.615850e-47 |
| Msa0160120 | Msa1296150 | 0.820855 | 5.499940e-53 | -8.615850e-47 |
| Msa0183960 | Msa1296150 | 0.821165 | 4.668449e-53 | -8.615850e-47 |
| Msa0190710 | Msa1296150 | 0.816034 | 6.806832e-52 | -8.615850e-47 |
| Msa0229420 | Msa1296150 | 0.810486 | 1.125452e-50 | -8.615850e-47 |
| Msa1255880 | Msa1296150 | 0.924404 | 7.373739e-90 | -8.615850e-47 |
| Msa1264230 | Msa1296150 | 0.826888 | 2.118511e-54 | -8.615850e-47 |
| Msa1290090 | Msa1296150 | 0.807385 | 5.187204e-50 | -8.615850e-47 |
| Msa1296150 | Msa1302920 | 0.818968 | 1.486197e-52 | -8.615850e-47 |
| Msa1296150 | Msa1303190 | 0.802038 | 6.781091e-49 | -8.615850e-47 |
| Msa1296150 | Msa1343540 | 0.828205 | 1.023081e-54 | -8.615850e-47 |
| Msa1296150 | Msa1345470 | 0.815809 | 7.643482e-52 | -8.615850e-47 |
| Msa1296150 | Msa1351560 | 0.828822 | 7.261990e-55 | -8.615850e-47 |
| Msa1296150 | Msa1387100 | 0.803363 | 3.613403e-49 | -8.615850e-47 |
| Msa1296150 | Msa1389500 | 0.831107 | 2.012867e-55 | -8.615850e-47 |
| Msa1296150 | Msa1389670 | 0.802043 | 6.764953e-49 | -8.615850e-47 |
| Msa1296150 | Msa1391400 | 0.806774 | 6.986824e-50 | -8.615850e-47 |
| Msa1296150 | Msa1397550 | 0.810364 | 1.196110e-50 | -8.615850e-47 |
| Msa1296150 | Msa1413600 | 0.825661 | 4.150964e-54 | -8.615850e-47 |
| Msa1296150 | Msa1416850 | 0.800596 | 1.338071e-48 | -8.615850e-47 |
| Msa1296150 | Msa1420630 | 0.807244 | 5.557207e-50 | -8.615850e-47 |
| Msa1296150 | Msa1425570 | 0.808015 | 3.811053e-50 | -8.615850e-47 |
| Msa1296150 | Msa1425600 | 0.803791 | 2.944592e-49 | -8.615850e-47 |
| Msa1296150 | Msa1437690 | 0.801287 | 9.668540e-49 | -8.615850e-47 |
| Msa1296150 | Msa1441590 | 0.802072 | 6.672738e-49 | -8.615850e-47 |
| Msa0375930 | Msa1296150 | 0.804698 | 1.906963e-49 | -8.615850e-47 |
| Msa0392480 | Msa1296150 | 0.806602 | 7.597683e-50 | -8.615850e-47 |
| Msa0402490 | Msa1296150 | 0.803903 | 2.791110e-49 | -8.615850e-47 |
| Msa0408490 | Msa1296150 | 0.804553 | 2.043766e-49 | -8.615850e-47 |
| Msa0424570 | Msa1296150 | 0.802191 | 6.307749e-49 | -8.615850e-47 |
| Msa0481580 | Msa1296150 | 0.803673 | 3.116204e-49 | -8.615850e-47 |
| Msa0481620 | Msa1296150 | 0.810503 | 1.115869e-50 | -8.615850e-47 |
| Msa0982220 | Msa1296150 | 0.809994 | 1.436786e-50 | -8.615850e-47 |
| Msa1019040 | Msa1296150 | 0.812610 | 3.887693e-51 | -8.615850e-47 |
| Msa1066790 | Msa1296150 | 0.804958 | 1.682747e-49 | -8.615850e-47 |
| Msa1066980 | Msa1296150 | 0.811672 | 6.227468e-51 | -8.615850e-47 |
| Msa0240460 | Msa1296150 | 0.818412 | 1.987129e-52 | -8.615850e-47 |
| Msa0282880 | Msa1296150 | 0.808837 | 2.544560e-50 | -8.615850e-47 |
| Msa0290040 | Msa1296150 | 0.816323 | 5.867249e-52 | -8.615850e-47 |
| Msa0307490 | Msa1296150 | 0.831416 | 1.690007e-55 | -8.615850e-47 |
| Msa0321180 | Msa1296150 | 0.804883 | 1.744417e-49 | -8.615850e-47 |
| Msa0321200 | Msa1296150 | 0.808178 | 3.518672e-50 | -8.615850e-47 |
| Msa1129320 | Msa1296150 | 0.805143 | 1.538721e-49 | -8.615850e-47 |
| Msa1147600 | Msa1296150 | 0.819499 | 1.124829e-52 | -8.615850e-47 |
| Msa1171640 | Msa1296150 | 0.804815 | 1.802411e-49 | -8.615850e-47 |
| Msa1172120 | Msa1296150 | 0.810278 | 1.248160e-50 | -8.615850e-47 |
| Msa1194480 | Msa1296150 | 0.806486 | 8.035359e-50 | -8.615850e-47 |
| Msa1203090 | Msa1296150 | 0.809069 | 2.270244e-50 | -8.615850e-47 |
| Msa1203510 | Msa1296150 | 0.921019 | 6.114587e-88 | -8.615850e-47 |
| Msa1203720 | Msa1296150 | 0.943268 | 1.633456e-102 | -8.615850e-47 |
| Msa0516000 | Msa1296150 | 0.801954 | 7.054879e-49 | -8.615850e-47 |
| Msa0523400 | Msa1296150 | 0.804539 | 2.058128e-49 | -8.615850e-47 |
| Msa0532910 | Msa1296150 | 0.805291 | 1.432799e-49 | -8.615850e-47 |
| Msa0540120 | Msa1296150 | 0.818724 | 1.687893e-52 | -8.615850e-47 |
| Msa0550840 | Msa1296150 | 0.821747 | 3.426065e-53 | -8.615850e-47 |
| Msa0550870 | Msa1296150 | 0.838921 | 2.157374e-57 | -8.615850e-47 |
| Msa0554770 | Msa1296150 | 0.810559 | 1.085448e-50 | -8.615850e-47 |
| Msa0558800 | Msa1296150 | 0.801379 | 9.258682e-49 | -8.615850e-47 |
| Msa0569630 | Msa1296150 | 0.810611 | 1.057483e-50 | -8.615850e-47 |
| Msa0570310 | Msa1296150 | 0.806065 | 9.855998e-50 | -8.615850e-47 |
| Msa0574230 | Msa1296150 | 0.813958 | 1.966213e-51 | -8.615850e-47 |
| Msa0576510 | Msa1296150 | 0.831275 | 1.830382e-55 | -8.615850e-47 |
| Msa0577140 | Msa1296150 | 0.835801 | 1.357722e-56 | -8.615850e-47 |
| Msa0600280 | Msa1296150 | 0.809482 | 1.851586e-50 | -8.615850e-47 |
| Msa0862750 | Msa1296150 | 0.824279 | 8.795742e-54 | -8.615850e-47 |
| Msa0866150 | Msa1296150 | 0.810556 | 1.086966e-50 | -8.615850e-47 |
| Msa0872800 | Msa1296150 | 0.801468 | 8.876184e-49 | -8.615850e-47 |
| Msa0873070 | Msa1296150 | 0.805411 | 1.352242e-49 | -8.615850e-47 |
| Msa0899080 | Msa1296150 | 0.814255 | 1.690679e-51 | -8.615850e-47 |
| Msa0975460 | Msa1296150 | 0.811765 | 5.944268e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296150 | MtrunA17_Chr8g0374711 | 98.413 | 252 | 4 | 0 | 1 | 252 | 1 | 252 | 0.0 | 513 |
| Msa1296150 | MtrunA17_Chr2g0287951 | 25.967 | 181 | 123 | 3 | 14 | 191 | 40 | 212 | 9.51e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296150 | AT3G50560.1 | 67.910 | 268 | 69 | 3 | 1 | 251 | 2 | 269 | 3.96e-125 | 356 |
Find 93 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTATTTGTAACCACTATTT+TGG | 0.164809 | 8_3:+54971736 | Msa1296150:five_prime_UTR |
| TCTTATCATCTGCTACTATT+TGG | 0.178737 | 8_3:+54973832 | Msa1296150:three_prime_UTR |
| GGTTGCTCTGCTTCTTTAAA+TGG | 0.216932 | 8_3:+54972571 | Msa1296150:CDS |
| TTAGAGCTTGTGTTGTTTCT+TGG | 0.236020 | 8_3:+54973977 | Msa1296150:three_prime_UTR |
| CAAGGGAAGTTTGGAAAGTT+TGG | 0.239457 | 8_3:-54972331 | None:intergenic |
| CTTATCATCTGCTACTATTT+GGG | 0.245781 | 8_3:+54973833 | Msa1296150:three_prime_UTR |
| TAAGCATTGAGATGCTTAAA+TGG | 0.283471 | 8_3:-54973957 | None:intergenic |
| GCTTCTTTAAATGGCATTGC+AGG | 0.309696 | 8_3:+54972580 | Msa1296150:CDS |
| ACAAATAGCAAAACTATATA+TGG | 0.323032 | 8_3:-54971722 | None:intergenic |
| TATTGTTATCATTATGTAAA+GGG | 0.332798 | 8_3:+54973920 | Msa1296150:three_prime_UTR |
| ATGAACGAACATCCATTTCT+TGG | 0.333809 | 8_3:-54973655 | None:intergenic |
| AAACATCATGAATTAATTCA+TGG | 0.349882 | 8_3:-54973810 | None:intergenic |
| TAGAGCTTGTGTTGTTTCTT+GGG | 0.350537 | 8_3:+54973978 | Msa1296150:three_prime_UTR |
| CGCCTTCAACTGTGCTCAAC+AGG | 0.354644 | 8_3:+54972370 | Msa1296150:CDS |
| ATTAGGACCGACGCCAACTA+TGG | 0.357925 | 8_3:-54971808 | None:intergenic |
| ATGAAACGGCAAGGGAAGTT+TGG | 0.367798 | 8_3:-54972340 | None:intergenic |
| TTTCCTCTTTCAACCATTCC+CGG | 0.371758 | 8_3:-54972529 | None:intergenic |
| TTTCTTGGGTCCATGCATTC+CGG | 0.377690 | 8_3:-54973640 | None:intergenic |
| TCCCTTGCCGTTTCATCCCT+CGG | 0.388630 | 8_3:+54972347 | Msa1296150:CDS |
| AAAGAGAGACATGAAAATAA+TGG | 0.392574 | 8_3:-54973749 | None:intergenic |
| ATGCATTGGCTCAAACATAT+TGG | 0.404371 | 8_3:+54973600 | Msa1296150:CDS |
| ATCTGCTACTATTTGGGACT+TGG | 0.419999 | 8_3:+54973839 | Msa1296150:three_prime_UTR |
| ATGTTGAAAAGGAGTTGGTT+TGG | 0.421399 | 8_3:-54972300 | None:intergenic |
| TATGTTTGAGCCAATGCATC+CGG | 0.433151 | 8_3:-54973596 | None:intergenic |
| AAGAATTAAGATTTAGCCTA+AGG | 0.435850 | 8_3:-54971686 | None:intergenic |
| TGGATTGAGAGATGTTGAAA+AGG | 0.438146 | 8_3:-54972311 | None:intergenic |
| TACAAATAAAGAATGTATAT+AGG | 0.447052 | 8_3:-54971662 | None:intergenic |
| CATTCTTTATTTGTAACCTT+AGG | 0.448531 | 8_3:+54971670 | Msa1296150:five_prime_UTR |
| AGTGTAAAAGAAGCATTTGA+AGG | 0.449118 | 8_3:+54972212 | Msa1296150:CDS |
| GCCATCCTCGCCCGTGACTT+AGG | 0.454853 | 8_3:+54971879 | Msa1296150:CDS |
| CTACTTGCTACCTATAGTAT+AGG | 0.457899 | 8_3:+54971572 | Msa1296150:five_prime_UTR |
| TGAACGAACATCCATTTCTT+GGG | 0.457910 | 8_3:-54973654 | None:intergenic |
| GGTAATATTGCAGCCATAGT+TGG | 0.459882 | 8_3:+54971795 | Msa1296150:CDS |
| GAATGCATGGACCCAAGAAA+TGG | 0.461502 | 8_3:+54973643 | Msa1296150:CDS |
| TAATGGAGCGACATAAATTA+CGG | 0.467636 | 8_3:-54973732 | None:intergenic |
| TTATTGTTATCATTATGTAA+AGG | 0.469868 | 8_3:+54973919 | Msa1296150:three_prime_UTR |
| AAAGGAACAATTCTATTCAC+TGG | 0.475162 | 8_3:+54972550 | Msa1296150:CDS |
| TCGTCGCGTGGAGGAGGAAG+TGG | 0.477711 | 8_3:+54973554 | Msa1296150:CDS |
| TGAAATAGCAAGGGAAGAAA+AGG | 0.479373 | 8_3:+54972148 | Msa1296150:CDS |
| TACCTGTTGAGCACAGTTGA+AGG | 0.480690 | 8_3:-54972372 | None:intergenic |
| GCTCGCAAGTTTGCTCATGA+AGG | 0.481049 | 8_3:+54971846 | Msa1296150:CDS |
| GCGATGGAGAGGCCGAGATT+AGG | 0.485603 | 8_3:-54971825 | None:intergenic |
| GAGAGATGTTGAAAAGGAGT+TGG | 0.485715 | 8_3:-54972305 | None:intergenic |
| AAGTGGTGGTGAGAGTGTTA+TGG | 0.486623 | 8_3:+54973571 | Msa1296150:CDS |
| ATTTATGAATTAGGTGCTGC+CGG | 0.492617 | 8_3:+54972510 | Msa1296150:intron |
| ACCAATATAGCCTATACTAT+AGG | 0.495163 | 8_3:-54971582 | None:intergenic |
| ACCTAAGTCACGGGCGAGGA+TGG | 0.502538 | 8_3:-54971880 | None:intergenic |
| GTGCACCTCCACCAAAATAG+TGG | 0.508075 | 8_3:-54971747 | None:intergenic |
| TTTGAAGGTGTACTTTCACT+TGG | 0.508660 | 8_3:+54972227 | Msa1296150:CDS |
| ATCAGTAACGACATGATTGA+CGG | 0.513894 | 8_3:-54973774 | None:intergenic |
| TGTTATGGACCCGGATGCAT+TGG | 0.516123 | 8_3:+54973586 | Msa1296150:CDS |
| GTAGCTCATATTATTATCGA+TGG | 0.524070 | 8_3:+54972798 | Msa1296150:CDS |
| CAAACGAAACGCACCTTGGT+GGG | 0.529770 | 8_3:-54972830 | None:intergenic |
| ACAAACGAAACGCACCTTGG+TGG | 0.530352 | 8_3:-54972831 | None:intergenic |
| ATGACGTCGTCGCGTGGAGG+AGG | 0.530537 | 8_3:+54973548 | Msa1296150:CDS |
| ATGAGCAAACTTGCGAGCGA+TGG | 0.536721 | 8_3:-54971841 | None:intergenic |
| GGCATATACACGTTCAAGAC+CGG | 0.538407 | 8_3:+54973621 | Msa1296150:CDS |
| TACATTCATACCTAAGTCAC+GGG | 0.542393 | 8_3:-54971889 | None:intergenic |
| GAAGGCGCCGAGGGATGAAA+CGG | 0.542643 | 8_3:-54972354 | None:intergenic |
| CAAAACTATATATGGAAGGA+AGG | 0.544164 | 8_3:-54971714 | None:intergenic |
| GAATTAGGTGCTGCCGGGAA+TGG | 0.547598 | 8_3:+54972516 | Msa1296150:intron |
| GACATAAATTACGGACTGGT+AGG | 0.548055 | 8_3:-54973723 | None:intergenic |
| GGAATGGTTGAAAGAGGAAA+AGG | 0.550184 | 8_3:+54972532 | Msa1296150:CDS |
| CGCCGAGGGATGAAACGGCA+AGG | 0.552431 | 8_3:-54972349 | None:intergenic |
| GCTAGAGAATTTCAGCCTCA+AGG | 0.567416 | 8_3:+54972768 | Msa1296150:CDS |
| ACGTTCAAGACCGGAATGCA+TGG | 0.567516 | 8_3:+54973630 | Msa1296150:CDS |
| TTTATGAATTAGGTGCTGCC+GGG | 0.568009 | 8_3:+54972511 | Msa1296150:intron |
| ACATAAATTACGGACTGGTA+GGG | 0.571986 | 8_3:-54973722 | None:intergenic |
| GGAGTTGGTTTGGATTGAAG+AGG | 0.572556 | 8_3:-54972290 | None:intergenic |
| TATGGGGTGCAGAGGATCAT+CGG | 0.575217 | 8_3:+54973520 | Msa1296150:intron |
| GTTGGCGTCGGTCCTAATCT+CGG | 0.576317 | 8_3:+54971813 | Msa1296150:CDS |
| GCCGAGGGATGAAACGGCAA+GGG | 0.581874 | 8_3:-54972348 | None:intergenic |
| AGCACAGTTGAAGGCGCCGA+GGG | 0.582313 | 8_3:-54972363 | None:intergenic |
| GCAACAATGACGTCGTCGCG+TGG | 0.583990 | 8_3:+54973542 | Msa1296150:CDS |
| ATGTTTGAGCCAATGCATCC+GGG | 0.591141 | 8_3:-54973595 | None:intergenic |
| CAAACTTGCGAGCGATGGAG+AGG | 0.595122 | 8_3:-54971836 | None:intergenic |
| ATACATTCATACCTAAGTCA+CGG | 0.596054 | 8_3:-54971890 | None:intergenic |
| CTGCCGGGAATGGTTGAAAG+AGG | 0.597430 | 8_3:+54972526 | Msa1296150:CDS |
| GTCACGGGCGAGGATGGCAA+CGG | 0.598987 | 8_3:-54971874 | None:intergenic |
| TCGCGTGGAGGAGGAAGTGG+TGG | 0.606812 | 8_3:+54973557 | Msa1296150:CDS |
| ATAGCAAAACTATATATGGA+AGG | 0.611900 | 8_3:-54971718 | None:intergenic |
| AGAAACATGGCAAGCTCACG+AGG | 0.620180 | 8_3:+54971774 | Msa1296150:CDS |
| TGGTGAGAGTGTTATGGACC+CGG | 0.622308 | 8_3:+54973577 | Msa1296150:CDS |
| GATTTGCAGATGAAATAGCA+AGG | 0.631251 | 8_3:+54972138 | Msa1296150:CDS |
| GAGCGACATAAATTACGGAC+TGG | 0.631742 | 8_3:-54973727 | None:intergenic |
| ATTTGCAGATGAAATAGCAA+GGG | 0.637104 | 8_3:+54972139 | Msa1296150:CDS |
| TCATACCTAAGTCACGGGCG+AGG | 0.643162 | 8_3:-54971884 | None:intergenic |
| TGAGCTACATGCACTCCTTG+AGG | 0.648657 | 8_3:-54972783 | None:intergenic |
| GAGCACAGTTGAAGGCGCCG+AGG | 0.649759 | 8_3:-54972364 | None:intergenic |
| ATTGCAGCCATAGTTGGCGT+CGG | 0.656355 | 8_3:+54971801 | Msa1296150:CDS |
| ACAATGACGTCGTCGCGTGG+AGG | 0.660348 | 8_3:+54973545 | Msa1296150:CDS |
| GAGGTGCACGATGAGAAACA+TGG | 0.687039 | 8_3:+54971761 | Msa1296150:exon |
| GTGTGCATGAGACAGGCTGT+GGG | 0.704247 | 8_3:+54972712 | Msa1296150:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAA+TGG | - | chr8_3:54972947-54972966 | None:intergenic | 0.0% |
| !!! | TATACTTTTTTTTTTTGAAA+TGG | - | chr8_3:54971621-54971640 | None:intergenic | 10.0% |
| !!! | ATTTCAAAAAAAAAAAGTAT+AGG | + | chr8_3:54971620-54971639 | Msa1296150:intron | 10.0% |
| !! | TAAATAATGATTTATGAATT+AGG | + | chr8_3:54972501-54972520 | Msa1296150:intron | 10.0% |
| !! | TACAAATAAAGAATGTATAT+AGG | - | chr8_3:54971665-54971684 | None:intergenic | 15.0% |
| !! | TTATTGTTATCATTATGTAA+AGG | + | chr8_3:54973919-54973938 | Msa1296150:three_prime_UTR | 15.0% |
| !! | TATTGTTATCATTATGTAAA+GGG | + | chr8_3:54973920-54973939 | Msa1296150:three_prime_UTR | 15.0% |
| !! | ACAAATAGCAAAACTATATA+TGG | - | chr8_3:54971725-54971744 | None:intergenic | 20.0% |
| !!! | TTCATCTATAACATACTTTT+TGG | + | chr8_3:54971929-54971948 | Msa1296150:intron | 20.0% |
| !! | TTTATGTTTGATTGAATTGA+AGG | + | chr8_3:54972055-54972074 | Msa1296150:intron | 20.0% |
| !! | TTATGTTTGATTGAATTGAA+GGG | + | chr8_3:54972056-54972075 | Msa1296150:intron | 20.0% |
| !!! | ATTATTATCGATGGTTTTAT+TGG | + | chr8_3:54972807-54972826 | Msa1296150:CDS | 20.0% |
| !! | ACATAGATGTATATTAGTTA+TGG | - | chr8_3:54973037-54973056 | None:intergenic | 20.0% |
| !!! | TGATTTTCTTAAATTATCAG+CGG | + | chr8_3:54973132-54973151 | Msa1296150:intron | 20.0% |
| !!! | TGATACCATTTTAGAAATTT+GGG | - | chr8_3:54973372-54973391 | None:intergenic | 20.0% |
| !!! | TAAATGACTTGTTATGTTAT+GGG | + | chr8_3:54973503-54973522 | Msa1296150:intron | 20.0% |
| !! | AAACATCATGAATTAATTCA+TGG | - | chr8_3:54973813-54973832 | None:intergenic | 20.0% |
| ! | TAGCAAGCAAAAATAAAAGT+AGG | - | chr8_3:54971555-54971574 | None:intergenic | 25.0% |
| !! | CATTCTTTATTTGTAACCTT+AGG | + | chr8_3:54971670-54971689 | Msa1296150:five_prime_UTR | 25.0% |
| ! | AAGAATTAAGATTTAGCCTA+AGG | - | chr8_3:54971689-54971708 | None:intergenic | 25.0% |
| ! | ATAGCAAAACTATATATGGA+AGG | - | chr8_3:54971721-54971740 | None:intergenic | 25.0% |
| ! | ATTATAAATTGAACTGATGC+AGG | + | chr8_3:54972104-54972123 | Msa1296150:intron | 25.0% |
| ! | TTATAAATTGAACTGATGCA+GGG | + | chr8_3:54972105-54972124 | Msa1296150:intron | 25.0% |
| !!! | ACAGAAACATTTTGATATGT+TGG | - | chr8_3:54972418-54972437 | None:intergenic | 25.0% |
| ! | TAGATGTATATTAGTTATGG+TGG | - | chr8_3:54973034-54973053 | None:intergenic | 25.0% |
| ! | AATTCAGTGTAATTATGTGT+CGG | - | chr8_3:54973109-54973128 | None:intergenic | 25.0% |
| ! | CTACATAAACACAAGATTTA+AGG | + | chr8_3:54973222-54973241 | Msa1296150:intron | 25.0% |
| !! | AGATAAAACGTTCAATTTTC+AGG | + | chr8_3:54973309-54973328 | Msa1296150:intron | 25.0% |
| !! | TCTATCCCAAATTTCTAAAA+TGG | + | chr8_3:54973364-54973383 | Msa1296150:intron | 25.0% |
| !!! | CTGATACCATTTTAGAAATT+TGG | - | chr8_3:54973373-54973392 | None:intergenic | 25.0% |
| ! | TAACAAGTCATTTACACAAT+AGG | - | chr8_3:54973497-54973516 | None:intergenic | 25.0% |
| !!! | GTAAATGACTTGTTATGTTA+TGG | + | chr8_3:54973502-54973521 | Msa1296150:intron | 25.0% |
| !!! | AAATGACTTGTTATGTTATG+GGG | + | chr8_3:54973504-54973523 | Msa1296150:intron | 25.0% |
| ! | AAAGAGAGACATGAAAATAA+TGG | - | chr8_3:54973752-54973771 | None:intergenic | 25.0% |
| GCAAAAATAAAAGTAGGAAG+TGG | - | chr8_3:54971549-54971568 | None:intergenic | 30.0% | |
| ACCTATAGTATAGGCTATAT+TGG | + | chr8_3:54971581-54971600 | Msa1296150:intron | 30.0% | |
| ACCAATATAGCCTATACTAT+AGG | - | chr8_3:54971585-54971604 | None:intergenic | 30.0% | |
| CAAAACTATATATGGAAGGA+AGG | - | chr8_3:54971717-54971736 | None:intergenic | 30.0% | |
| ! | GCTATTTGTAACCACTATTT+TGG | + | chr8_3:54971736-54971755 | Msa1296150:five_prime_UTR | 30.0% |
| !! | ATTTGTAACCACTATTTTGG+TGG | + | chr8_3:54971739-54971758 | Msa1296150:five_prime_UTR | 30.0% |
| ATACATTCATACCTAAGTCA+CGG | - | chr8_3:54971893-54971912 | None:intergenic | 30.0% | |
| ATTTGCAGATGAAATAGCAA+GGG | + | chr8_3:54972139-54972158 | Msa1296150:CDS | 30.0% | |
| !! | AGTGTAAAAGAAGCATTTGA+AGG | + | chr8_3:54972212-54972231 | Msa1296150:CDS | 30.0% |
| AAAGGAACAATTCTATTCAC+TGG | + | chr8_3:54972550-54972569 | Msa1296150:CDS | 30.0% | |
| GTAGCTCATATTATTATCGA+TGG | + | chr8_3:54972798-54972817 | Msa1296150:CDS | 30.0% | |
| TGAATGAGAGGAAAAGAAAA+GGG | - | chr8_3:54972880-54972899 | None:intergenic | 30.0% | |
| ATGAATGAGAGGAAAAGAAA+AGG | - | chr8_3:54972881-54972900 | None:intergenic | 30.0% | |
| TTCCTCTCATTCATATTCAT+TGG | + | chr8_3:54972887-54972906 | Msa1296150:intron | 30.0% | |
| TCCTCTCATTCATATTCATT+GGG | + | chr8_3:54972888-54972907 | Msa1296150:intron | 30.0% | |
| GGAATGAAATATATGCAAGT+AGG | - | chr8_3:54972926-54972945 | None:intergenic | 30.0% | |
| ! | AGTTATGGTGGAATTAGAAT+AGG | - | chr8_3:54973022-54973041 | None:intergenic | 30.0% |
| AGATCTATGAAGCACAAATA+CGG | - | chr8_3:54973204-54973223 | None:intergenic | 30.0% | |
| ATATTGTCAAGAGTTCTACA+TGG | + | chr8_3:54973280-54973299 | Msa1296150:intron | 30.0% | |
| ! | TTTTACATGTAGGTTTTGCA+AGG | + | chr8_3:54973455-54973474 | Msa1296150:intron | 30.0% |
| ! | TTTACATGTAGGTTTTGCAA+GGG | + | chr8_3:54973456-54973475 | Msa1296150:intron | 30.0% |
| TAATGGAGCGACATAAATTA+CGG | - | chr8_3:54973735-54973754 | None:intergenic | 30.0% | |
| TCTTATCATCTGCTACTATT+TGG | + | chr8_3:54973832-54973851 | Msa1296150:three_prime_UTR | 30.0% | |
| CTTATCATCTGCTACTATTT+GGG | + | chr8_3:54973833-54973852 | Msa1296150:three_prime_UTR | 30.0% | |
| !! | TAAGCATTGAGATGCTTAAA+TGG | - | chr8_3:54973960-54973979 | None:intergenic | 30.0% |
| !!! | GGAATTATTTTGATGCAACA+TGG | - | chr8_3:54974064-54974083 | None:intergenic | 30.0% |
| ! | CTACTTGCTACCTATAGTAT+AGG | + | chr8_3:54971572-54971591 | Msa1296150:five_prime_UTR | 35.0% |
| TACATTCATACCTAAGTCAC+GGG | - | chr8_3:54971892-54971911 | None:intergenic | 35.0% | |
| GATTTGCAGATGAAATAGCA+AGG | + | chr8_3:54972138-54972157 | Msa1296150:CDS | 35.0% | |
| TGAAATAGCAAGGGAAGAAA+AGG | + | chr8_3:54972148-54972167 | Msa1296150:CDS | 35.0% | |
| ! | TTTGAAGGTGTACTTTCACT+TGG | + | chr8_3:54972227-54972246 | Msa1296150:CDS | 35.0% |
| ! | ATGTTGAAAAGGAGTTGGTT+TGG | - | chr8_3:54972303-54972322 | None:intergenic | 35.0% |
| TGGATTGAGAGATGTTGAAA+AGG | - | chr8_3:54972314-54972333 | None:intergenic | 35.0% | |
| ! | ATTTATGAATTAGGTGCTGC+CGG | + | chr8_3:54972510-54972529 | Msa1296150:intron | 35.0% |
| AGAAAAGGGAAAGAAGATCT+AGG | - | chr8_3:54972866-54972885 | None:intergenic | 35.0% | |
| TCCCAATGAATATGAATGAG+AGG | - | chr8_3:54972892-54972911 | None:intergenic | 35.0% | |
| ACATCTATGTAGACATTCCT+CGG | + | chr8_3:54973047-54973066 | Msa1296150:intron | 35.0% | |
| ! | ATTATGTGTCGGTATTGTGT+CGG | - | chr8_3:54973098-54973117 | None:intergenic | 35.0% |
| TCTTAAATTATCAGCGGTGT+CGG | + | chr8_3:54973138-54973157 | Msa1296150:intron | 35.0% | |
| ATGAAGCACAAATACGGATT+TGG | - | chr8_3:54973198-54973217 | None:intergenic | 35.0% | |
| ! | GCAGTCATCATTTTACATGT+AGG | + | chr8_3:54973445-54973464 | Msa1296150:intron | 35.0% |
| !! | ATGCATTGGCTCAAACATAT+TGG | + | chr8_3:54973600-54973619 | Msa1296150:CDS | 35.0% |
| TGAACGAACATCCATTTCTT+GGG | - | chr8_3:54973657-54973676 | None:intergenic | 35.0% | |
| ATGAACGAACATCCATTTCT+TGG | - | chr8_3:54973658-54973677 | None:intergenic | 35.0% | |
| !! | ACATAAATTACGGACTGGTA+GGG | - | chr8_3:54973725-54973744 | None:intergenic | 35.0% |
| ATCAGTAACGACATGATTGA+CGG | - | chr8_3:54973777-54973796 | None:intergenic | 35.0% | |
| !! | TTAGAGCTTGTGTTGTTTCT+TGG | + | chr8_3:54973977-54973996 | Msa1296150:three_prime_UTR | 35.0% |
| !! | TAGAGCTTGTGTTGTTTCTT+GGG | + | chr8_3:54973978-54973997 | Msa1296150:three_prime_UTR | 35.0% |
| !!! | TGTAACCACTATTTTGGTGG+AGG | + | chr8_3:54971742-54971761 | Msa1296150:five_prime_UTR | 40.0% |
| GGTAATATTGCAGCCATAGT+TGG | + | chr8_3:54971795-54971814 | Msa1296150:CDS | 40.0% | |
| TAAATTGAACTGATGCAGGG+AGG | + | chr8_3:54972108-54972127 | Msa1296150:intron | 40.0% | |
| GAGAGATGTTGAAAAGGAGT+TGG | - | chr8_3:54972308-54972327 | None:intergenic | 40.0% | |
| CAAGGGAAGTTTGGAAAGTT+TGG | - | chr8_3:54972334-54972353 | None:intergenic | 40.0% | |
| ! | TTTATGAATTAGGTGCTGCC+GGG | + | chr8_3:54972511-54972530 | Msa1296150:intron | 40.0% |
| TTTCCTCTTTCAACCATTCC+CGG | - | chr8_3:54972532-54972551 | None:intergenic | 40.0% | |
| GGAATGGTTGAAAGAGGAAA+AGG | + | chr8_3:54972532-54972551 | Msa1296150:CDS | 40.0% | |
| GGTTGCTCTGCTTCTTTAAA+TGG | + | chr8_3:54972571-54972590 | Msa1296150:CDS | 40.0% | |
| GCTTCTTTAAATGGCATTGC+AGG | + | chr8_3:54972580-54972599 | Msa1296150:CDS | 40.0% | |
| AGAGAACATTGCATTGCATG+TGG | + | chr8_3:54972688-54972707 | Msa1296150:intron | 40.0% | |
| TAAACAAACGAAACGCACCT+TGG | - | chr8_3:54972837-54972856 | None:intergenic | 40.0% | |
| CACAAATACGGATTTGGACA+CGG | - | chr8_3:54973192-54973211 | None:intergenic | 40.0% | |
| ! | TCTATGCGACTAGTTACGTA+GGG | + | chr8_3:54973423-54973442 | Msa1296150:intron | 40.0% |
| ! | AGGTTTTGCAAGGGAGAATT+AGG | + | chr8_3:54973465-54973484 | Msa1296150:intron | 40.0% |
| TATGTTTGAGCCAATGCATC+CGG | - | chr8_3:54973599-54973618 | None:intergenic | 40.0% | |
| !! | GACATAAATTACGGACTGGT+AGG | - | chr8_3:54973726-54973745 | None:intergenic | 40.0% |
| ! | ATCTGCTACTATTTGGGACT+TGG | + | chr8_3:54973839-54973858 | Msa1296150:three_prime_UTR | 40.0% |
| !! | GGAGTTGGTTTGGATTGAAG+AGG | - | chr8_3:54972293-54972312 | None:intergenic | 45.0% |
| ATGAAACGGCAAGGGAAGTT+TGG | - | chr8_3:54972343-54972362 | None:intergenic | 45.0% | |
| TACCTGTTGAGCACAGTTGA+AGG | - | chr8_3:54972375-54972394 | None:intergenic | 45.0% | |
| GCTAGAGAATTTCAGCCTCA+AGG | + | chr8_3:54972768-54972787 | Msa1296150:CDS | 45.0% | |
| !!! | ATGGTTTTATTGGCCCACCA+AGG | + | chr8_3:54972817-54972836 | Msa1296150:CDS | 45.0% |
| ATCAAGACACGTCTAATCCG+AGG | - | chr8_3:54973067-54973086 | None:intergenic | 45.0% | |
| ACGGATTTGGACACGGATAT+CGG | - | chr8_3:54973185-54973204 | None:intergenic | 45.0% | |
| TCGCATAGAGGTAAGCAGAT+GGG | - | chr8_3:54973412-54973431 | None:intergenic | 45.0% | |
| CTACGTAACTAGTCGCATAG+AGG | - | chr8_3:54973424-54973443 | None:intergenic | 45.0% | |
| ! | CTCTATGCGACTAGTTACGT+AGG | + | chr8_3:54973422-54973441 | Msa1296150:intron | 45.0% |
| TGTTATGTTATGGGGTGCAG+AGG | + | chr8_3:54973512-54973531 | Msa1296150:intron | 45.0% | |
| !! | AAGTGGTGGTGAGAGTGTTA+TGG | + | chr8_3:54973571-54973590 | Msa1296150:CDS | 45.0% |
| ATGTTTGAGCCAATGCATCC+GGG | - | chr8_3:54973598-54973617 | None:intergenic | 45.0% | |
| GGCATATACACGTTCAAGAC+CGG | + | chr8_3:54973621-54973640 | Msa1296150:CDS | 45.0% | |
| TTTCTTGGGTCCATGCATTC+CGG | - | chr8_3:54973643-54973662 | None:intergenic | 45.0% | |
| GAATGCATGGACCCAAGAAA+TGG | + | chr8_3:54973643-54973662 | Msa1296150:CDS | 45.0% | |
| GAGCGACATAAATTACGGAC+TGG | - | chr8_3:54973730-54973749 | None:intergenic | 45.0% | |
| GTGCACCTCCACCAAAATAG+TGG | - | chr8_3:54971750-54971769 | None:intergenic | 50.0% | |
| GAGGTGCACGATGAGAAACA+TGG | + | chr8_3:54971761-54971780 | Msa1296150:exon | 50.0% | |
| AGAAACATGGCAAGCTCACG+AGG | + | chr8_3:54971774-54971793 | Msa1296150:CDS | 50.0% | |
| ATTGCAGCCATAGTTGGCGT+CGG | + | chr8_3:54971801-54971820 | Msa1296150:CDS | 50.0% | |
| ATTAGGACCGACGCCAACTA+TGG | - | chr8_3:54971811-54971830 | None:intergenic | 50.0% | |
| ATGAGCAAACTTGCGAGCGA+TGG | - | chr8_3:54971844-54971863 | None:intergenic | 50.0% | |
| ! | GCTCGCAAGTTTGCTCATGA+AGG | + | chr8_3:54971846-54971865 | Msa1296150:CDS | 50.0% |
| ATGTGGTGTGTGCATGAGAC+AGG | + | chr8_3:54972705-54972724 | Msa1296150:intron | 50.0% | |
| TGAGCTACATGCACTCCTTG+AGG | - | chr8_3:54972786-54972805 | None:intergenic | 50.0% | |
| CAAACGAAACGCACCTTGGT+GGG | - | chr8_3:54972833-54972852 | None:intergenic | 50.0% | |
| ACAAACGAAACGCACCTTGG+TGG | - | chr8_3:54972834-54972853 | None:intergenic | 50.0% | |
| ! | TGTCGGTATTGTGTCGGTGT+CGG | - | chr8_3:54973092-54973111 | None:intergenic | 50.0% |
| CACGGATATCGGACACGATA+TGG | - | chr8_3:54973174-54973193 | None:intergenic | 50.0% | |
| CGCATAGAGGTAAGCAGATG+GGG | - | chr8_3:54973411-54973430 | None:intergenic | 50.0% | |
| GTCGCATAGAGGTAAGCAGA+TGG | - | chr8_3:54973413-54973432 | None:intergenic | 50.0% | |
| TATGGGGTGCAGAGGATCAT+CGG | + | chr8_3:54973520-54973539 | Msa1296150:intron | 50.0% | |
| !! | TGGTGAGAGTGTTATGGACC+CGG | + | chr8_3:54973577-54973596 | Msa1296150:CDS | 50.0% |
| TGTTATGGACCCGGATGCAT+TGG | + | chr8_3:54973586-54973605 | Msa1296150:CDS | 50.0% | |
| ACGTTCAAGACCGGAATGCA+TGG | + | chr8_3:54973630-54973649 | Msa1296150:CDS | 50.0% | |
| !! | GTTGGCGTCGGTCCTAATCT+CGG | + | chr8_3:54971813-54971832 | Msa1296150:CDS | 55.0% |
| CAAACTTGCGAGCGATGGAG+AGG | - | chr8_3:54971839-54971858 | None:intergenic | 55.0% | |
| TCATACCTAAGTCACGGGCG+AGG | - | chr8_3:54971887-54971906 | None:intergenic | 55.0% | |
| ! | TCCCTTGCCGTTTCATCCCT+CGG | + | chr8_3:54972347-54972366 | Msa1296150:CDS | 55.0% |
| CGCCTTCAACTGTGCTCAAC+AGG | + | chr8_3:54972370-54972389 | Msa1296150:CDS | 55.0% | |
| ! | GAATTAGGTGCTGCCGGGAA+TGG | + | chr8_3:54972516-54972535 | Msa1296150:intron | 55.0% |
| CTGCCGGGAATGGTTGAAAG+AGG | + | chr8_3:54972526-54972545 | Msa1296150:CDS | 55.0% | |
| TGTGTGCATGAGACAGGCTG+TGG | + | chr8_3:54972711-54972730 | Msa1296150:intron | 55.0% | |
| GTGTGCATGAGACAGGCTGT+GGG | + | chr8_3:54972712-54972731 | Msa1296150:intron | 55.0% | |
| !! | TTATCAGCGGTGTCGGCTGT+CGG | + | chr8_3:54973145-54973164 | Msa1296150:intron | 55.0% |
| GCGATGGAGAGGCCGAGATT+AGG | - | chr8_3:54971828-54971847 | None:intergenic | 60.0% | |
| ACCTAAGTCACGGGCGAGGA+TGG | - | chr8_3:54971883-54971902 | None:intergenic | 60.0% | |
| GCCGAGGGATGAAACGGCAA+GGG | - | chr8_3:54972351-54972370 | None:intergenic | 60.0% | |
| !! | GAAGGCGCCGAGGGATGAAA+CGG | - | chr8_3:54972357-54972376 | None:intergenic | 60.0% |
| !! | AGCACAGTTGAAGGCGCCGA+GGG | - | chr8_3:54972366-54972385 | None:intergenic | 60.0% |
| GCAACAATGACGTCGTCGCG+TGG | + | chr8_3:54973542-54973561 | Msa1296150:CDS | 60.0% | |
| ACAATGACGTCGTCGCGTGG+AGG | + | chr8_3:54973545-54973564 | Msa1296150:CDS | 60.0% | |
| GTCACGGGCGAGGATGGCAA+CGG | - | chr8_3:54971877-54971896 | None:intergenic | 65.0% | |
| GCCATCCTCGCCCGTGACTT+AGG | + | chr8_3:54971879-54971898 | Msa1296150:CDS | 65.0% | |
| CGCCGAGGGATGAAACGGCA+AGG | - | chr8_3:54972352-54972371 | None:intergenic | 65.0% | |
| !! | GAGCACAGTTGAAGGCGCCG+AGG | - | chr8_3:54972367-54972386 | None:intergenic | 65.0% |
| ATGACGTCGTCGCGTGGAGG+AGG | + | chr8_3:54973548-54973567 | Msa1296150:CDS | 65.0% | |
| TCGTCGCGTGGAGGAGGAAG+TGG | + | chr8_3:54973554-54973573 | Msa1296150:CDS | 65.0% | |
| TCGCGTGGAGGAGGAAGTGG+TGG | + | chr8_3:54973557-54973576 | Msa1296150:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 54971541 | 54974087 | 54971541 | ID=Msa1296150;Name=Msa1296150 |
| chr8_3 | mRNA | 54971541 | 54974087 | 54971541 | ID=Msa1296150-mRNA-1;Parent=Msa1296150;Name=Msa1296150-mRNA-1;_AED=0.04;_eAED=0.04;_QI=182|1|1|1|0.8|0.66|6|399|252 |
| chr8_3 | exon | 54971541 | 54971593 | 54971541 | ID=Msa1296150-mRNA-1:exon:15743;Parent=Msa1296150-mRNA-1 |
| chr8_3 | exon | 54971642 | 54971900 | 54971642 | ID=Msa1296150-mRNA-1:exon:15744;Parent=Msa1296150-mRNA-1 |
| chr8_3 | exon | 54972126 | 54972391 | 54972126 | ID=Msa1296150-mRNA-1:exon:15745;Parent=Msa1296150-mRNA-1 |
| chr8_3 | exon | 54972523 | 54972616 | 54972523 | ID=Msa1296150-mRNA-1:exon:15746;Parent=Msa1296150-mRNA-1 |
| chr8_3 | exon | 54972727 | 54972838 | 54972727 | ID=Msa1296150-mRNA-1:exon:15747;Parent=Msa1296150-mRNA-1 |
| chr8_3 | exon | 54973532 | 54974087 | 54973532 | ID=Msa1296150-mRNA-1:exon:15748;Parent=Msa1296150-mRNA-1 |
| chr8_3 | five_prime_UTR | 54971541 | 54971593 | 54971541 | ID=Msa1296150-mRNA-1:five_prime_utr;Parent=Msa1296150-mRNA-1 |
| chr8_3 | five_prime_UTR | 54971642 | 54971770 | 54971642 | ID=Msa1296150-mRNA-1:five_prime_utr;Parent=Msa1296150-mRNA-1 |
| chr8_3 | CDS | 54971771 | 54971900 | 54971771 | ID=Msa1296150-mRNA-1:cds;Parent=Msa1296150-mRNA-1 |
| chr8_3 | CDS | 54972126 | 54972391 | 54972126 | ID=Msa1296150-mRNA-1:cds;Parent=Msa1296150-mRNA-1 |
| chr8_3 | CDS | 54972523 | 54972616 | 54972523 | ID=Msa1296150-mRNA-1:cds;Parent=Msa1296150-mRNA-1 |
| chr8_3 | CDS | 54972727 | 54972838 | 54972727 | ID=Msa1296150-mRNA-1:cds;Parent=Msa1296150-mRNA-1 |
| chr8_3 | CDS | 54973532 | 54973688 | 54973532 | ID=Msa1296150-mRNA-1:cds;Parent=Msa1296150-mRNA-1 |
| chr8_3 | three_prime_UTR | 54973689 | 54974087 | 54973689 | ID=Msa1296150-mRNA-1:three_prime_utr;Parent=Msa1296150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
