AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0873070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0873070 MtrunA17_Chr6g0454301 91.865 504 41 0 1 504 230 733 0.0 959
Msa0873070 MtrunA17_Chr6g0454301 79.039 229 47 1 272 500 1 228 2.05e-124 380
Msa0873070 MtrunA17_Chr8g0336331 82.083 480 85 1 25 504 1 479 0.0 830
Msa0873070 MtrunA17_Chr3g0078841 80.833 480 92 0 25 504 1 480 0.0 826
Msa0873070 MtrunA17_Chr6g0454341 80.208 480 95 0 25 504 1 480 0.0 825
Msa0873070 MtrunA17_Chr6g0454321 79.237 472 98 0 25 496 1 472 0.0 801
Msa0873070 MtrunA17_Chr6g0454321 71.901 121 31 1 29 146 499 619 1.49e-47 174
Msa0873070 MtrunA17_Chr6g0454401 76.033 484 111 3 25 504 1 483 0.0 758
Msa0873070 MtrunA17_Chr6g0454181 74.120 483 121 2 25 504 1 482 0.0 754
Msa0873070 MtrunA17_Chr6g0454191 74.587 484 118 3 25 504 1 483 0.0 751
Msa0873070 MtrunA17_Chr6g0453951 73.045 486 126 3 23 504 45 529 0.0 738
Msa0873070 MtrunA17_Chr6g0454331 74.066 482 119 3 28 504 1 481 0.0 730
Msa0873070 MtrunA17_Chr6g0454201 75.207 484 115 3 25 504 1 483 0.0 724
Msa0873070 MtrunA17_Chr6g0454291 74.375 480 119 2 28 504 1 479 0.0 724
Msa0873070 MtrunA17_Chr8g0359821 72.878 483 125 4 25 504 1 480 0.0 723
Msa0873070 MtrunA17_Chr6g0454361 73.967 484 121 3 25 504 1 483 0.0 723
Msa0873070 MtrunA17_Chr6g0453961 71.694 484 132 3 25 504 10 492 0.0 720
Msa0873070 MtrunA17_Chr6g0454211 71.630 497 134 3 11 504 277 769 0.0 711
Msa0873070 MtrunA17_Chr6g0454211 52.571 350 83 4 152 501 1 267 4.36e-107 336
Msa0873070 MtrunA17_Chr6g0454351 70.309 485 121 4 25 504 1 467 0.0 703
Msa0873070 MtrunA17_Chr6g0454141 69.151 483 145 2 25 504 1 482 0.0 697
Msa0873070 MtrunA17_Chr6g0454261 70.807 483 137 2 25 504 1 482 0.0 697
Msa0873070 MtrunA17_Chr6g0452771 71.222 483 135 2 25 504 1 482 0.0 696
Msa0873070 MtrunA17_Chr6g0454121 68.944 483 145 3 25 504 1 481 0.0 671
Msa0873070 MtrunA17_Chr6g0454151 69.151 483 143 3 25 504 1 480 0.0 663
Msa0873070 MtrunA17_Chr6g0454131 68.944 483 145 3 25 504 1 481 0.0 661
Msa0873070 MtrunA17_Chr5g0423981 67.975 484 114 5 25 504 1 447 0.0 660
Msa0873070 MtrunA17_Chr7g0217881 68.944 483 128 3 25 504 1 464 0.0 660
Msa0873070 MtrunA17_Chr5g0426431 59.197 473 187 5 34 504 12 480 0.0 584
Msa0873070 MtrunA17_Chr6g0454251 69.114 395 118 2 29 420 2 395 0.0 573
Msa0873070 MtrunA17_Chr3g0092641 57.294 473 196 5 33 503 11 479 0.0 569
Msa0873070 MtrunA17_Chr2g0278711 57.113 478 197 4 29 503 6 478 0.0 556
Msa0873070 MtrunA17_Chr3g0118771 52.000 475 224 3 30 502 17 489 0.0 518
Msa0873070 MtrunA17_Chr3g0118671 51.158 475 228 3 30 502 2 474 2.28e-179 512
Msa0873070 MtrunA17_Chr3g0118711 50.209 478 234 3 27 502 6 481 7.70e-177 506
Msa0873070 MtrunA17_Chr3g0118691 49.474 475 236 3 30 502 11 483 4.18e-176 504
Msa0873070 MtrunA17_Chr3g0118701 49.053 475 238 3 30 502 11 483 8.54e-174 498
Msa0873070 MtrunA17_Chr4g0050341 50.740 473 225 4 32 498 17 487 3.39e-172 494
Msa0873070 MtrunA17_Chr8g0355011 62.228 368 96 1 137 504 40 364 1.69e-162 465
Msa0873070 MtrunA17_Chr3g0118751 48.523 474 213 5 30 502 2 445 3.58e-162 467
Msa0873070 MtrunA17_Chr6g0454271 74.138 290 74 1 215 504 1 289 7.66e-162 460
Msa0873070 MtrunA17_Chr3g0118661 48.626 473 240 2 30 501 9 479 2.57e-159 461
Msa0873070 MtrunA17_Chr6g0454221 90.393 229 22 0 272 500 1 229 8.70e-153 437
Msa0873070 MtrunA17_Chr6g0454171 61.064 357 90 4 152 504 1 312 7.51e-151 433
Msa0873070 MtrunA17_Chr6g0454231 85.944 249 34 1 13 261 230 477 4.72e-150 437
Msa0873070 MtrunA17_Chr6g0454231 64.202 257 52 4 247 502 2 219 8.26e-104 319
Msa0873070 MtrunA17_Chr8g0336271 78.776 245 51 1 25 269 1 244 1.81e-139 403
Msa0873070 MtrunA17_Chr5g0426401 58.786 313 124 4 194 503 2 312 4.91e-133 388
Msa0873070 MtrunA17_Chr6g0453981 70.690 232 67 1 152 383 1 231 1.36e-116 343
Msa0873070 MtrunA17_Chr3g0118721 54.138 290 131 2 215 502 1 290 2.46e-110 329
Msa0873070 MtrunA17_Chr6g0454371 79.769 173 35 0 332 504 1 173 1.54e-98 294
Msa0873070 MtrunA17_Chr6g0453941 66.055 218 72 2 155 371 56 272 4.76e-95 289
Msa0873070 MtrunA17_Chr6g0453941 73.684 57 11 1 30 86 7 59 2.09e-18 85.5
Msa0873070 MtrunA17_Chr3g0112771 36.809 470 263 10 36 502 14 452 3.02e-93 291
Msa0873070 MtrunA17_Chr6g0454281 69.744 195 56 1 25 216 1 195 3.14e-92 280
Msa0873070 MtrunA17_Chr5g0412111 35.430 477 281 13 33 501 4 461 6.76e-87 275
Msa0873070 MtrunA17_Chr5g0412131 35.404 483 274 13 33 501 11 469 4.49e-85 270
Msa0873070 MtrunA17_Chr3g0112761 33.970 471 277 10 36 502 10 450 8.43e-84 266
Msa0873070 MtrunA17_Chr5g0412101 34.783 483 278 12 33 501 11 470 2.01e-83 266
Msa0873070 MtrunA17_Chr8g0336261 83.212 137 23 0 332 468 1 137 1.37e-81 249
Msa0873070 MtrunA17_Chr1g0207981 32.298 483 293 9 34 503 13 474 2.86e-79 255
Msa0873070 MtrunA17_Chr4g0032331 33.122 474 277 10 36 502 10 450 1.78e-78 253
Msa0873070 MtrunA17_Chr6g0464881 31.950 482 290 13 30 504 7 457 1.38e-75 245
Msa0873070 MtrunA17_Chr4g0053501 31.743 482 289 14 36 504 13 467 4.57e-73 239
Msa0873070 MtrunA17_Chr7g0218811 32.128 470 278 11 33 498 14 446 4.09e-71 233
Msa0873070 MtrunA17_Chr7g0218831 31.447 477 271 13 33 498 5 436 1.39e-70 231
Msa0873070 MtrunA17_Chr7g0218841 32.150 479 266 14 33 498 5 437 1.88e-70 231
Msa0873070 MtrunA17_Chr3g0098111 30.353 481 302 10 34 501 9 469 2.74e-70 232
Msa0873070 MtrunA17_Chr6g0464921 31.092 476 295 11 33 503 10 457 9.79e-69 227
Msa0873070 MtrunA17_Chr4g0053321 31.161 491 296 16 29 504 19 482 1.97e-68 228
Msa0873070 MtrunA17_Chr7g0218821 29.916 478 289 11 33 498 4 447 1.80e-66 221
Msa0873070 MtrunA17_Chr6g0454111 63.291 158 56 2 196 352 27 183 2.90e-66 212
Msa0873070 MtrunA17_Chr6g0464871 29.691 485 303 13 20 498 11 463 3.53e-66 221
Msa0873070 MtrunA17_Chr1g0161351 30.488 492 307 11 24 501 27 497 4.11e-66 221
Msa0873070 MtrunA17_Chr6g0464861 31.027 477 288 15 30 498 7 450 4.12e-66 220
Msa0873070 MtrunA17_Chr5g0414331 30.208 480 286 11 30 498 9 450 7.31e-66 220
Msa0873070 MtrunA17_Chr7g0250001 29.289 478 298 10 32 502 4 448 9.57e-66 219
Msa0873070 MtrunA17_Chr8g0365811 29.825 513 315 13 9 501 470 957 2.03e-65 228
Msa0873070 MtrunA17_Chr8g0365811 29.713 488 298 14 36 501 11 475 9.25e-55 197
Msa0873070 MtrunA17_Chr8g0380531 30.544 478 292 14 34 501 10 457 1.05e-64 216
Msa0873070 MtrunA17_Chr1g0207861 31.224 490 302 12 25 501 1 468 1.88e-64 217
Msa0873070 MtrunA17_Chr7g0249981 29.979 477 296 14 32 502 23 467 2.14e-64 217
Msa0873070 MtrunA17_Chr7g0218791 30.041 486 283 13 25 498 1 441 2.91e-64 215
Msa0873070 MtrunA17_Chr6g0464841 30.672 476 292 15 30 498 7 451 4.27e-64 215
Msa0873070 MtrunA17_Chr8g0377921 30.584 497 284 18 33 502 2 464 2.78e-63 213
Msa0873070 MtrunA17_Chr5g0401721 30.247 486 298 18 35 502 9 471 2.31e-62 211
Msa0873070 MtrunA17_Chr1g0207971 30.083 482 287 13 34 501 8 453 5.59e-62 209
Msa0873070 MtrunA17_Chr1g0207831 31.546 485 282 15 36 501 10 463 1.88e-61 208
Msa0873070 MtrunA17_Chr5g0414321 29.132 484 294 12 30 502 7 452 3.61e-61 207
Msa0873070 MtrunA17_Chr1g0207951 31.056 483 293 11 29 501 118 570 8.25e-61 216
Msa0873070 MtrunA17_Chr1g0207951 30.738 488 294 14 29 501 650 1108 7.52e-59 210
Msa0873070 MtrunA17_Chr5g0431361 30.228 483 281 14 34 501 12 453 2.00e-60 205
Msa0873070 MtrunA17_Chr5g0393591 28.866 485 282 11 24 501 7 435 7.25e-59 201
Msa0873070 MtrunA17_Chr5g0426411 54.598 174 74 3 25 195 1 172 1.45e-58 191
Msa0873070 MtrunA17_Chr3g0121991 29.923 518 296 17 15 501 64 545 5.47e-58 201
Msa0873070 MtrunA17_Chr5g0431441 29.607 483 292 14 34 502 18 466 7.21e-58 199
Msa0873070 MtrunA17_Chr7g0275681 31.969 513 270 18 30 502 8 481 4.95e-57 197
Msa0873070 MtrunA17_Chr6g0454381 62.143 140 53 0 152 291 1 140 6.39e-56 183
Msa0873070 MtrunA17_Chr6g0462571 29.363 487 284 14 36 497 6 457 2.87e-55 192
Msa0873070 MtrunA17_Chr5g0431401 29.193 483 283 15 34 501 10 448 3.76e-55 191
Msa0873070 MtrunA17_Chr4g0011051 30.695 518 276 17 32 502 7 488 4.45e-55 192
Msa0873070 MtrunA17_Chr4g0044511 27.938 519 325 12 6 501 12 504 4.57e-55 192
Msa0873070 MtrunA17_Chr7g0243931 28.713 505 302 14 29 501 12 490 1.12e-54 191
Msa0873070 MtrunA17_Chr5g0431421 29.400 483 284 14 34 502 10 449 3.88e-54 188
Msa0873070 MtrunA17_Chr8g0377941 29.752 484 293 13 36 502 9 462 4.44e-54 189
Msa0873070 MtrunA17_Chr6g0462531 29.388 490 287 14 36 499 6 462 7.43e-54 188
Msa0873070 MtrunA17_Chr7g0232401 27.105 487 297 11 34 494 6 460 1.28e-53 187
Msa0873070 MtrunA17_Chr3g0122001 31.504 492 289 16 34 501 6 473 1.32e-53 194
Msa0873070 MtrunA17_Chr3g0122001 30.143 491 296 15 34 501 486 952 2.01e-52 191
Msa0873070 MtrunA17_Chr7g0249931 27.593 482 309 16 29 502 35 484 2.50e-53 187
Msa0873070 MtrunA17_Chr8g0336741 28.659 492 286 13 34 497 13 467 5.14e-53 186
Msa0873070 MtrunA17_Chr1g0207931 37.597 258 148 4 253 501 244 497 1.44e-52 186
Msa0873070 MtrunA17_Chr1g0207931 30.719 153 91 4 34 179 92 236 1.07e-11 67.0
Msa0873070 MtrunA17_Chr5g0431371 29.339 484 281 16 34 501 10 448 1.81e-52 184
Msa0873070 MtrunA17_Chr7g0243951 27.723 505 306 16 29 501 6 483 2.62e-52 184
Msa0873070 MtrunA17_Chr7g0243771 28.457 499 297 16 34 501 6 475 8.85e-52 183
Msa0873070 MtrunA17_Chr7g0265041 29.167 504 299 14 33 502 10 489 8.96e-52 183
Msa0873070 MtrunA17_Chr7g0243631 27.291 502 303 14 34 501 13 486 1.03e-51 183
Msa0873070 MtrunA17_Chr5g0419761 28.180 511 304 16 28 502 3 486 1.16e-51 182
Msa0873070 MtrunA17_Chr7g0275511 28.743 501 302 14 21 497 2 471 1.89e-51 182
Msa0873070 MtrunA17_Chr6g0462541 28.834 489 286 15 36 497 6 459 5.44e-51 181
Msa0873070 MtrunA17_Chr5g0419771 28.492 537 325 18 1 502 1 513 1.13e-50 181
Msa0873070 MtrunA17_Chr6g0462551 27.621 496 284 14 36 497 6 460 1.52e-50 179
Msa0873070 MtrunA17_Chr4g0060511 26.535 505 316 15 29 501 6 487 4.91e-50 178
Msa0873070 MtrunA17_Chr7g0243801 27.833 503 303 16 30 501 3 476 1.32e-49 177
Msa0873070 MtrunA17_Chr7g0232391 28.081 495 292 14 34 500 6 464 1.78e-49 176
Msa0873070 MtrunA17_Chr7g0243681 28.287 502 293 17 34 501 11 479 4.38e-49 176
Msa0873070 MtrunA17_Chr6g0449931 29.249 506 272 20 32 497 4 463 1.12e-48 174
Msa0873070 MtrunA17_Chr8g0336651 27.033 492 294 13 34 497 6 460 1.27e-48 180
Msa0873070 MtrunA17_Chr8g0336651 28.685 502 287 17 34 504 781 1242 5.00e-46 172
Msa0873070 MtrunA17_Chr8g0336651 33.597 253 130 6 253 497 548 770 7.50e-36 142
Msa0873070 MtrunA17_Chr3g0106231 28.247 485 282 17 34 502 18 452 2.09e-48 173
Msa0873070 MtrunA17_Chr8g0335141 29.225 503 284 20 27 497 2 464 2.34e-48 173
Msa0873070 MtrunA17_Chr7g0265151 29.200 500 299 17 34 502 9 484 3.26e-48 173
Msa0873070 MtrunA17_Chr8g0366391 28.571 490 307 17 34 501 9 477 3.96e-48 173
Msa0873070 MtrunA17_Chr8g0347271 28.571 497 288 15 33 504 18 472 4.37e-48 173
Msa0873070 MtrunA17_Chr6g0462521 27.629 485 288 14 36 499 6 448 5.88e-48 172
Msa0873070 MtrunA17_Chr1g0159551 26.763 482 293 17 39 501 19 459 7.99e-48 172
Msa0873070 MtrunA17_Chr8g0373301 31.332 383 215 11 137 497 106 462 8.58e-48 172
Msa0873070 MtrunA17_Chr1g0173121 27.515 487 292 16 36 501 16 462 8.65e-48 171
Msa0873070 MtrunA17_Chr7g0265101 28.543 501 312 16 32 504 7 489 9.46e-48 172
Msa0873070 MtrunA17_Chr4g0072761 29.637 496 292 13 17 501 3 452 1.07e-47 171
Msa0873070 MtrunA17_Chr8g0336731 26.800 500 299 14 27 498 27 487 1.14e-47 172
Msa0873070 MtrunA17_Chr5g0427561 85.057 87 13 0 418 504 1 87 2.05e-47 159
Msa0873070 MtrunA17_Chr7g0265051 28.515 505 305 17 32 504 7 487 2.28e-47 171
Msa0873070 MtrunA17_Chr7g0243871 27.953 508 290 19 30 501 5 472 4.18e-47 170
Msa0873070 MtrunA17_Chr5g0448551 28.894 443 283 12 31 469 4 418 4.60e-47 169
Msa0873070 MtrunA17_Chr8g0347281 28.773 497 287 15 33 504 17 471 6.07e-47 169
Msa0873070 MtrunA17_Chr1g0153451 27.126 494 290 15 34 497 6 459 8.11e-47 169
Msa0873070 MtrunA17_Chr7g0243861 26.243 503 317 14 29 501 9 487 9.02e-47 169
Msa0873070 MtrunA17_Chr7g0265141 29.730 518 292 16 25 502 1 486 1.76e-46 169
Msa0873070 MtrunA17_Chr8g0336691 31.300 377 216 9 142 497 1021 1375 2.78e-46 173
Msa0873070 MtrunA17_Chr8g0336691 27.668 506 289 17 27 497 6 469 3.57e-46 173
Msa0873070 MtrunA17_Chr8g0336691 28.717 491 271 19 34 504 480 911 2.06e-40 156
Msa0873070 MtrunA17_Chr5g0432731 32.476 311 177 9 206 502 6 297 2.83e-46 163
Msa0873070 MtrunA17_Chr7g0232411 27.510 498 291 15 34 500 6 464 4.66e-46 167
Msa0873070 MtrunA17_Chr1g0179901 26.908 524 283 18 34 502 16 494 8.24e-46 167
Msa0873070 MtrunA17_Chr4g0014061 27.607 489 296 14 37 498 12 469 9.43e-46 166
Msa0873070 MtrunA17_Chr6g0459311 27.879 495 292 16 31 497 10 467 1.08e-45 166
Msa0873070 MtrunA17_Chr5g0429711 27.049 488 307 13 30 501 7 461 2.33e-45 165
Msa0873070 MtrunA17_Chr4g0072771 28.302 477 303 11 31 501 22 465 4.62e-45 164
Msa0873070 MtrunA17_Chr8g0334851 28.807 486 288 18 32 490 4 458 6.57e-45 164
Msa0873070 MtrunA17_Chr8g0339631 28.777 417 227 12 108 495 87 462 6.79e-45 164
Msa0873070 MtrunA17_Chr6g0486251 26.735 490 294 15 36 497 8 460 6.96e-45 164
Msa0873070 MtrunA17_Chr6g0486201 26.735 490 294 15 36 497 8 460 6.96e-45 164
Msa0873070 MtrunA17_Chr7g0232311 28.169 497 289 16 31 498 3 460 1.06e-44 163
Msa0873070 MtrunA17_Chr5g0442601 26.744 516 294 16 31 502 401 876 1.15e-44 168
Msa0873070 MtrunA17_Chr5g0442601 26.453 344 196 9 112 442 34 333 1.24e-27 117
Msa0873070 MtrunA17_Chr7g0232341 27.158 475 288 14 31 480 3 444 1.37e-44 163
Msa0873070 MtrunA17_Chr5g0440421 26.459 514 322 19 25 502 1 494 2.64e-44 163
Msa0873070 MtrunA17_Chr7g0243781 27.092 502 297 20 34 501 9 475 3.30e-44 162
Msa0873070 MtrunA17_Chr7g0232331 26.834 477 287 12 31 480 3 444 4.95e-44 161
Msa0873070 MtrunA17_Chr1g0165701 28.367 490 306 16 35 501 16 483 6.58e-44 162
Msa0873070 MtrunA17_Chr5g0428081 27.935 494 299 15 37 501 14 479 1.27e-43 160
Msa0873070 MtrunA17_Chr7g0235051 26.786 504 270 15 34 500 11 452 1.38e-43 160
Msa0873070 MtrunA17_Chr8g0339461 32.086 374 187 13 142 480 109 450 3.14e-43 159
Msa0873070 MtrunA17_Chr8g0335161 28.425 489 301 18 30 497 2 462 9.71e-43 158
Msa0873070 MtrunA17_Chr2g0294931 27.579 504 290 18 37 501 14 481 1.27e-42 158
Msa0873070 MtrunA17_Chr4g0044501 27.935 494 302 16 34 501 10 475 1.40e-42 158
Msa0873070 MtrunA17_Chr5g0401851 28.515 505 297 20 32 501 8 483 1.59e-42 158
Msa0873070 MtrunA17_Chr4g0066201 27.912 498 282 19 37 501 21 474 4.07e-42 156
Msa0873070 MtrunA17_Chr7g0249961 33.333 273 161 7 235 502 4 260 7.19e-42 150
Msa0873070 MtrunA17_Chr4g0066151 27.328 494 295 13 37 501 21 479 1.19e-41 155
Msa0873070 MtrunA17_Chr5g0420801 28.169 497 287 20 29 498 2 455 1.59e-41 154
Msa0873070 MtrunA17_Chr3g0079731 27.545 501 296 16 36 499 8 478 2.20e-41 154
Msa0873070 MtrunA17_Chr8g0370941 27.756 508 296 21 34 499 8 486 3.63e-41 154
Msa0873070 MtrunA17_Chr8g0355221 26.052 499 309 15 35 501 16 486 5.17e-41 154
Msa0873070 MtrunA17_Chr8g0339451 30.467 407 206 14 108 480 79 442 8.46e-41 152
Msa0873070 MtrunA17_Chr5g0442521 24.754 509 304 15 31 498 2 472 8.63e-41 153
Msa0873070 MtrunA17_Chr8g0369341 27.291 491 313 13 28 499 1 466 9.42e-41 152
Msa0873070 MtrunA17_Chr4g0066131 26.477 491 297 11 37 498 16 471 9.62e-41 152
Msa0873070 MtrunA17_Chr5g0442541 26.943 386 235 8 143 502 102 466 1.19e-40 152
Msa0873070 MtrunA17_Chr5g0442561 25.444 507 308 18 31 502 2 473 1.59e-40 152
Msa0873070 MtrunA17_Chr5g0416741 25.813 492 316 13 36 501 15 483 3.79e-40 151
Msa0873070 MtrunA17_Chr5g0448521 26.172 512 293 18 31 502 2 468 5.38e-40 150
Msa0873070 MtrunA17_Chr6g0463891 26.535 505 298 17 36 501 14 484 7.58e-40 150
Msa0873070 MtrunA17_Chr8g0361371 27.345 501 294 16 31 498 4 467 7.72e-40 150
Msa0873070 MtrunA17_Chr5g0442581 26.172 512 302 16 31 502 2 477 8.19e-40 151
Msa0873070 MtrunA17_Chr8g0339601 35.433 254 125 7 253 480 69 309 1.20e-39 146
Msa0873070 MtrunA17_Chr8g0374931 27.767 497 298 16 37 501 14 481 1.57e-39 149
Msa0873070 MtrunA17_Chr7g0243761 26.477 491 291 19 34 501 11 454 2.64e-39 148
Msa0873070 MtrunA17_Chr8g0382021 37.559 213 110 4 309 501 279 488 3.35e-39 149
Msa0873070 MtrunA17_Chr7g0218311 27.888 502 288 19 37 501 19 483 5.26e-39 148
Msa0873070 MtrunA17_Chr6g0463851 26.036 507 295 17 37 501 14 482 7.90e-39 147
Msa0873070 MtrunA17_Chr5g0442491 25.341 513 303 16 31 502 2 475 8.02e-39 147
Msa0873070 MtrunA17_Chr3g0106251 29.393 313 191 7 199 502 3 294 1.56e-38 143
Msa0873070 MtrunA17_Chr7g0243851 33.835 266 158 5 254 501 177 442 2.07e-38 145
Msa0873070 MtrunA17_Chr8g0339441 40.104 192 95 4 309 480 217 408 3.85e-38 144
Msa0873070 MtrunA17_Chr4g0066221 27.000 500 297 18 37 501 14 480 6.88e-38 145
Msa0873070 MtrunA17_Chr4g0044521 27.140 479 293 19 44 499 19 464 9.63e-38 144
Msa0873070 MtrunA17_Chr1g0153461 37.681 207 112 4 308 497 2 208 1.06e-37 137
Msa0873070 MtrunA17_Chr4g0042891 29.167 360 214 10 160 500 127 464 1.20e-37 144
Msa0873070 MtrunA17_Chr4g0066171 26.572 493 294 16 37 501 24 476 1.76e-37 144
Msa0873070 MtrunA17_Chr8g0334861 24.800 500 306 17 31 500 3 462 2.23e-37 143
Msa0873070 MtrunA17_Chr8g0374901 31.104 299 175 8 229 501 185 478 2.86e-37 143
Msa0873070 MtrunA17_Chr5g0410941 26.070 514 316 16 20 501 8 489 3.07e-37 143
Msa0873070 MtrunA17_Chr2g0294921 26.233 507 324 13 22 501 147 630 3.09e-37 145
Msa0873070 MtrunA17_Chr5g0429681 27.105 487 305 14 31 498 41 496 3.37e-37 143
Msa0873070 MtrunA17_Chr7g0265111 28.343 501 304 20 34 502 39 516 3.76e-37 144
Msa0873070 MtrunA17_Chr4g0066281 25.610 492 299 12 37 501 15 466 3.93e-37 142
Msa0873070 MtrunA17_Chr4g0042931 28.367 490 294 17 34 500 7 462 5.34e-37 142
Msa0873070 MtrunA17_Chr2g0302991 28.272 382 222 9 143 501 110 462 7.59e-37 141
Msa0873070 MtrunA17_Chr4g0066261 31.959 291 165 7 238 501 197 481 8.22e-37 142
Msa0873070 MtrunA17_Chr2g0302961 25.956 497 307 13 32 501 3 465 2.89e-36 140
Msa0873070 MtrunA17_Chr5g0442511 25.192 520 295 19 15 501 35 493 6.26e-36 139
Msa0873070 MtrunA17_Chr2g0294941 26.997 363 221 10 145 482 17 360 1.89e-35 136
Msa0873070 MtrunA17_Chr8g0374971 29.630 297 181 6 230 501 187 480 2.49e-35 137
Msa0873070 MtrunA17_Chr2g0307961 25.410 488 324 14 30 503 9 470 4.18e-35 137
Msa0873070 MtrunA17_Chr8g0336321 26.696 457 296 15 34 475 7 439 4.26e-35 137
Msa0873070 MtrunA17_Chr5g0403641 25.819 519 293 16 16 500 41 501 4.29e-35 137
Msa0873070 MtrunA17_Chr7g0243711 35.081 248 140 8 272 501 72 316 4.45e-35 134
Msa0873070 MtrunA17_Chr8g0374941 26.326 509 288 16 37 501 952 1417 4.61e-35 140
Msa0873070 MtrunA17_Chr8g0374941 25.761 493 279 16 37 485 14 463 2.62e-32 132
Msa0873070 MtrunA17_Chr8g0374941 29.137 278 169 6 230 482 651 925 6.91e-32 130
Msa0873070 MtrunA17_Chr6g0463861 26.016 492 305 16 37 501 14 473 1.98e-34 135
Msa0873070 MtrunA17_Chr5g0416821 25.207 484 318 15 36 501 16 473 2.00e-34 135
Msa0873070 MtrunA17_Chr8g0334831 26.667 495 271 17 31 477 3 453 2.75e-34 135
Msa0873070 MtrunA17_Chr2g0329111 26.078 510 299 20 31 498 3 476 2.79e-34 135
Msa0873070 MtrunA17_Chr5g0431431 33.083 266 152 8 206 467 110 353 3.41e-34 132
Msa0873070 MtrunA17_Chr8g0336251 26.477 457 297 15 34 475 7 439 4.65e-34 134
Msa0873070 MtrunA17_Chr8g0350881 25.245 511 293 14 36 501 14 480 8.51e-34 133
Msa0873070 MtrunA17_Chr6g0482061 24.847 491 322 15 34 500 11 478 1.91e-33 132
Msa0873070 MtrunA17_Chr7g0241801 27.912 455 267 17 31 478 6 406 2.15e-33 131
Msa0873070 MtrunA17_Chr7g0241781 27.948 458 263 18 31 478 6 406 3.80e-33 130
Msa0873070 MtrunA17_Chr7g0243611 32.035 231 141 7 226 448 55 277 1.03e-32 126
Msa0873070 MtrunA17_Chr4g0044481 26.606 436 255 15 22 444 16 399 1.05e-32 129
Msa0873070 MtrunA17_Chr7g0243911 36.508 189 103 3 305 476 17 205 2.30e-31 120
Msa0873070 MtrunA17_Chr2g0278721 27.215 474 304 17 23 479 506 955 6.10e-31 127
Msa0873070 MtrunA17_Chr2g0278721 29.060 234 148 8 253 478 220 443 4.15e-19 91.3
Msa0873070 MtrunA17_Chr3g0079711 36.413 184 97 4 336 499 3 186 1.72e-30 117
Msa0873070 MtrunA17_Chr6g0466831 27.253 455 290 17 34 478 18 441 1.80e-30 123
Msa0873070 MtrunA17_Chr8g0361411 25.880 483 310 18 32 501 6 453 1.85e-30 123
Msa0873070 MtrunA17_Chr6g0454391 80.000 65 13 0 394 458 11 75 2.19e-30 114
Msa0873070 MtrunA17_Chr7g0243811 25.735 408 245 15 46 435 1 368 6.18e-29 118
Msa0873070 MtrunA17_Chr7g0231631 31.250 256 161 7 254 501 11 259 1.79e-28 114
Msa0873070 MtrunA17_Chr6g0466841 26.593 455 293 16 34 478 18 441 1.98e-28 117
Msa0873070 MtrunA17_Chr5g0427571 34.975 203 124 4 281 475 71 273 2.60e-28 114
Msa0873070 MtrunA17_Chr1g0207881 38.562 153 87 2 355 501 233 384 3.28e-28 116
Msa0873070 MtrunA17_Chr5g0409591 29.412 255 143 8 245 468 205 453 5.04e-28 117
Msa0873070 MtrunA17_Chr6g0464091 24.628 471 304 15 27 478 10 448 1.75e-26 112
Msa0873070 MtrunA17_Chr8g0367221 25.647 464 294 15 34 477 798 1230 2.84e-26 113
Msa0873070 MtrunA17_Chr8g0367221 23.696 460 307 13 34 477 12 443 1.76e-24 108
Msa0873070 MtrunA17_Chr8g0367221 24.899 494 305 18 6 477 1271 1720 5.69e-24 106
Msa0873070 MtrunA17_Chr7g0232351 27.295 414 232 15 34 419 6 378 2.24e-25 107
Msa0873070 MtrunA17_Chr7g0250021 28.443 334 203 13 29 356 7 310 5.93e-25 105
Msa0873070 MtrunA17_Chr8g0337381 42.623 122 64 2 380 497 2 121 1.53e-23 96.3
Msa0873070 MtrunA17_Chr3g0092031 31.792 173 109 4 312 478 6 175 2.64e-23 97.8
Msa0873070 MtrunA17_Chr4g0069611 31.466 232 143 9 254 478 216 438 3.53e-22 99.4
Msa0873070 MtrunA17_Chr2g0278741 24.790 476 302 17 25 478 84 525 2.00e-21 97.4
Msa0873070 MtrunA17_Chr1g0196851 23.780 492 286 20 23 478 38 476 4.18e-21 96.3
Msa0873070 MtrunA17_Chr4g0066141 28.618 304 165 10 223 501 75 351 1.18e-20 93.6
Msa0873070 MtrunA17_Chr4g0029131 23.467 473 294 18 30 478 8 436 1.72e-20 95.1
Msa0873070 MtrunA17_Chr3g0118741 61.017 59 23 0 30 88 2 60 2.05e-20 85.5
Msa0873070 MtrunA17_Chr3g0118731 39.286 112 66 1 86 197 28 137 1.28e-19 85.9
Msa0873070 MtrunA17_Chr8g0357361 35.461 141 82 3 308 444 116 251 3.54e-19 87.4
Msa0873070 MtrunA17_Chr4g0029151 22.766 470 301 15 30 478 16 444 1.20e-18 88.6
Msa0873070 MtrunA17_Chr2g0302851 27.686 242 158 7 245 478 207 439 1.74e-18 88.2
Msa0873070 MtrunA17_Chr4g0039881 28.395 243 155 9 245 478 183 415 2.43e-18 87.4
Msa0873070 MtrunA17_Chr6g0454241 78.049 41 9 0 194 234 38 78 1.75e-17 77.4
Msa0873070 MtrunA17_Chr6g0454241 75.610 41 10 0 461 501 1 41 3.60e-16 73.6
Msa0873070 MtrunA17_Chr4g0040691 26.562 256 168 6 257 504 217 460 5.95e-17 83.2
Msa0873070 MtrunA17_Chr4g0040711 30.052 193 118 6 257 445 217 396 1.02e-16 82.4
Msa0873070 MtrunA17_Chr2g0283041 29.167 168 110 4 312 470 258 425 2.13e-16 81.6
Msa0873070 MtrunA17_Chr7g0243731 41.429 70 40 1 376 444 4 73 3.52e-14 67.8
Msa0873070 MtrunA17_Chr2g0319761 29.508 183 119 5 306 478 253 435 1.88e-13 72.4
Msa0873070 MtrunA17_Chr2g0319791 28.421 190 126 5 310 489 257 446 2.55e-13 72.0
Msa0873070 MtrunA17_Chr6g0454311 56.863 51 22 0 197 247 6 56 6.50e-13 63.5
Msa0873070 MtrunA17_Chr2g0319801 30.286 175 115 4 312 483 259 429 7.81e-13 70.5
Msa0873070 MtrunA17_Chr2g0319751 29.213 178 116 5 310 477 734 911 4.79e-12 68.6
Msa0873070 MtrunA17_Chr7g0267931 70.270 37 10 1 39 74 25 61 5.27e-12 61.2
Msa0873070 MtrunA17_Chr2g0319731 27.273 209 135 7 306 499 270 476 1.12e-11 67.0
Msa0873070 MtrunA17_Chr1g0207911 25.194 258 158 9 36 281 10 244 3.03e-11 63.9
Msa0873070 MtrunA17_Chr8g0334841 35.294 119 62 3 241 356 28 134 5.01e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0873070 AT1G22360.1 55.301 481 211 3 25 503 1 479 0.0 570
Msa0873070 AT1G22380.1 55.579 475 207 3 31 503 10 482 0.0 566
Msa0873070 AT1G22340.1 55.346 477 208 4 31 504 10 484 0.0 564
Msa0873070 AT1G22400.1 53.878 477 215 4 30 503 9 483 0.0 554
Msa0873070 AT1G22360.2 53.430 481 208 4 25 503 1 467 0.0 544
Msa0873070 AT1G22370.2 54.906 479 203 5 29 503 8 477 0.0 533
Msa0873070 AT1G78270.1 50.617 486 230 6 22 502 1 481 0.0 518
Msa0873070 AT1G22370.1 55.116 303 130 3 205 503 7 307 4.34e-112 334
Msa0873070 AT5G59590.1 35.443 474 266 12 31 498 7 446 2.39e-85 271
Msa0873070 AT3G11340.1 33.895 475 274 11 32 502 7 445 4.67e-85 270
Msa0873070 AT5G59580.1 34.382 477 264 13 32 498 7 444 2.82e-81 260
Msa0873070 AT3G46680.1 33.195 482 265 11 32 498 7 446 9.79e-81 258
Msa0873070 AT3G46670.1 34.110 472 269 12 34 498 9 445 4.09e-80 257
Msa0873070 AT5G38010.1 34.086 487 273 13 25 499 1 451 6.83e-80 256
Msa0873070 AT3G46690.1 34.249 473 274 10 32 499 7 447 1.27e-79 256
Msa0873070 AT3G46700.1 33.264 478 271 12 32 501 7 444 5.43e-79 254
Msa0873070 AT2G36970.1 31.579 494 297 12 25 501 1 470 7.89e-79 255
Msa0873070 AT5G38040.1 32.688 465 269 12 43 499 19 447 1.59e-77 250
Msa0873070 AT3G46650.1 33.333 471 259 10 32 497 8 428 3.64e-77 249
Msa0873070 AT5G05860.1 33.053 475 279 9 34 503 9 449 1.94e-76 248
Msa0873070 AT3G55700.1 33.333 480 269 16 36 502 10 451 2.12e-75 245
Msa0873070 AT5G05900.1 31.435 474 279 9 34 498 8 444 2.49e-75 244
Msa0873070 AT3G46660.1 33.333 474 268 13 36 498 16 452 3.42e-75 244
Msa0873070 AT3G21560.1 32.056 496 282 14 33 504 11 475 4.91e-74 243
Msa0873070 AT5G05870.1 31.513 476 289 7 34 501 8 454 5.27e-74 241
Msa0873070 AT3G46720.1 32.623 469 276 9 32 498 7 437 6.16e-73 238
Msa0873070 AT5G05880.1 30.361 471 289 9 34 498 8 445 1.91e-72 237
Msa0873070 AT2G28080.1 32.150 479 287 14 38 504 22 474 3.12e-72 237
Msa0873070 AT4G15490.1 31.643 493 292 15 30 504 4 469 4.86e-71 234
Msa0873070 AT5G05890.1 32.211 475 279 11 34 498 8 449 1.02e-70 233
Msa0873070 AT2G26480.1 31.458 480 287 11 31 504 5 448 1.02e-69 230
Msa0873070 AT4G15500.1 31.070 486 289 12 33 502 8 463 1.97e-69 230
Msa0873070 AT4G15480.1 31.762 488 285 15 34 501 19 478 4.22e-67 224
Msa0873070 AT3G55710.1 31.315 479 284 15 36 502 10 455 9.21e-66 220
Msa0873070 AT1G05680.1 29.140 477 293 12 34 498 6 449 2.19e-64 216
Msa0873070 AT2G31750.1 28.333 480 305 11 32 502 6 455 3.65e-63 213
Msa0873070 AT1G05675.1 28.721 477 295 11 34 498 6 449 1.02e-62 211
Msa0873070 AT2G31750.2 28.333 480 305 11 32 502 6 455 1.12e-62 213
Msa0873070 AT3G02100.1 29.424 486 301 15 25 498 1 456 1.92e-62 211
Msa0873070 AT2G43840.2 28.542 480 301 11 32 504 5 449 1.28e-60 206
Msa0873070 AT4G01070.1 31.493 489 279 13 30 494 4 460 3.99e-60 205
Msa0873070 AT2G43820.1 28.778 483 300 13 30 504 3 449 1.02e-59 203
Msa0873070 AT2G43840.1 28.333 480 302 11 32 504 5 449 1.38e-59 203
Msa0873070 AT2G23260.1 29.268 492 298 15 25 503 1 455 1.42e-59 203
Msa0873070 AT2G23250.1 31.158 475 277 18 37 501 1 435 7.82e-59 201
Msa0873070 AT2G36770.1 29.880 502 293 19 34 502 14 489 1.57e-58 201
Msa0873070 AT2G31790.1 28.512 477 304 10 31 498 5 453 3.09e-58 200
Msa0873070 AT2G36800.1 31.412 503 285 16 34 502 12 488 4.88e-58 200
Msa0873070 AT2G30140.1 30.738 488 277 15 30 501 9 451 9.09e-58 198
Msa0873070 AT2G30140.2 30.738 488 276 15 30 501 9 450 1.41e-57 198
Msa0873070 AT2G36790.1 33.400 503 274 19 34 502 13 488 1.59e-57 199
Msa0873070 AT2G36780.1 30.417 503 289 17 34 502 14 489 2.37e-55 193
Msa0873070 AT2G15480.1 28.968 504 312 13 19 501 2 480 2.52e-55 192
Msa0873070 AT1G05560.1 27.515 487 296 14 33 501 4 451 9.45e-54 188
Msa0873070 AT2G15480.2 28.599 514 311 14 19 501 2 490 1.45e-53 188
Msa0873070 AT1G01420.2 31.089 505 279 18 22 497 1 465 1.46e-53 188
Msa0873070 AT1G01420.1 31.377 494 272 17 33 497 7 462 1.54e-53 188
Msa0873070 AT1G05560.2 27.515 487 296 14 33 501 54 501 1.72e-53 189
Msa0873070 AT2G15490.3 29.615 493 300 13 34 501 7 477 3.01e-53 187
Msa0873070 AT2G30150.2 29.876 482 282 14 34 501 13 452 3.04e-53 186
Msa0873070 AT2G36760.1 29.200 500 299 18 34 502 14 489 3.19e-53 187
Msa0873070 AT3G53160.1 30.891 505 284 18 34 502 8 483 3.74e-53 187
Msa0873070 AT4G34131.1 28.370 497 316 12 25 500 1 478 5.60e-53 186
Msa0873070 AT2G15490.1 29.435 496 300 13 34 501 7 480 1.50e-52 185
Msa0873070 AT4G15550.1 28.457 499 288 15 33 500 12 472 4.22e-52 184
Msa0873070 AT2G30150.1 29.707 478 280 14 38 501 1 436 9.28e-52 182
Msa0873070 AT3G53150.1 28.324 519 298 16 31 502 19 510 1.50e-51 183
Msa0873070 AT1G10400.1 30.123 488 291 16 32 500 5 461 1.50e-51 182
Msa0873070 AT5G14860.1 30.693 505 276 19 34 501 8 475 2.83e-51 182
Msa0873070 AT2G36750.1 30.357 504 287 20 34 502 10 484 3.05e-51 182
Msa0873070 AT5G66690.1 28.291 509 278 18 32 500 5 466 2.65e-50 179
Msa0873070 AT5G17050.1 27.310 487 303 12 30 502 8 457 7.41e-50 177
Msa0873070 AT2G16890.2 28.283 495 292 16 34 501 9 467 3.35e-49 176
Msa0873070 AT5G26310.1 27.362 508 284 16 32 500 5 466 5.56e-49 176
Msa0873070 AT4G14090.1 27.143 490 300 14 27 500 6 454 1.09e-48 174
Msa0873070 AT1G01390.1 31.928 498 275 16 33 504 7 466 2.15e-48 174
Msa0873070 AT1G01390.2 31.928 498 275 16 33 504 24 483 2.86e-48 174
Msa0873070 AT1G05530.1 26.069 491 305 15 32 502 3 455 1.18e-47 171
Msa0873070 AT3G50740.1 27.626 514 281 16 32 500 5 472 1.31e-47 172
Msa0873070 AT3G16520.3 31.165 369 218 12 143 499 113 457 3.61e-47 170
Msa0873070 AT1G30530.1 29.363 361 232 6 143 502 113 451 5.76e-47 169
Msa0873070 AT5G17040.1 26.526 475 304 10 34 502 5 440 2.26e-46 167
Msa0873070 AT3G16520.2 31.624 351 204 12 143 481 113 439 6.31e-46 166
Msa0873070 AT3G16520.1 31.624 351 204 12 143 481 113 439 8.37e-46 166
Msa0873070 AT4G34138.1 28.376 511 288 17 32 503 9 480 1.84e-45 166
Msa0873070 AT5G17040.2 29.355 310 206 3 194 502 41 338 1.86e-45 162
Msa0873070 AT5G17030.1 26.025 488 307 12 30 502 8 456 2.39e-45 165
Msa0873070 AT1G24100.1 27.551 490 295 15 32 501 9 458 7.30e-45 164
Msa0873070 AT4G34135.1 28.000 500 305 14 30 500 7 480 1.87e-43 160
Msa0873070 AT5G03490.1 29.485 485 290 18 30 500 15 461 2.01e-43 160
Msa0873070 AT4G36770.1 27.824 478 279 14 34 482 4 444 3.00e-43 159
Msa0873070 AT1G73880.1 28.889 495 302 16 27 502 4 467 8.59e-43 159
Msa0873070 AT3G21790.1 26.707 498 308 11 36 501 6 478 7.99e-41 154
Msa0873070 AT3G22250.1 25.732 478 280 13 31 474 5 441 7.41e-40 150
Msa0873070 AT4G15280.1 27.108 498 303 13 36 502 6 474 1.19e-39 150
Msa0873070 AT5G37950.1 29.708 377 225 14 49 419 1 343 1.68e-39 147
Msa0873070 AT4G15280.2 27.108 498 303 13 36 502 38 506 2.11e-39 150
Msa0873070 AT2G16890.3 27.533 454 263 17 34 459 9 424 2.73e-39 148
Msa0873070 AT1G51210.1 28.509 456 274 17 32 476 18 432 1.39e-38 146
Msa0873070 AT5G37950.2 30.053 376 219 14 49 419 1 337 2.79e-38 143
Msa0873070 AT3G21800.1 25.651 499 308 13 36 501 7 475 8.90e-38 145
Msa0873070 AT2G18560.1 28.496 379 214 13 144 494 20 369 9.18e-38 142
Msa0873070 AT2G29740.1 26.749 486 309 14 36 498 10 471 1.95e-37 144
Msa0873070 AT2G18570.1 25.355 493 302 19 32 494 3 459 1.04e-36 142
Msa0873070 AT3G21780.1 27.979 386 236 9 139 501 102 468 1.38e-36 141
Msa0873070 AT2G29710.1 24.297 498 315 15 31 502 2 463 5.48e-36 139
Msa0873070 AT2G29730.1 31.092 238 145 6 273 502 237 463 1.97e-35 138
Msa0873070 AT2G29750.1 25.151 497 310 15 36 502 10 474 2.69e-35 138
Msa0873070 AT3G21760.1 25.097 518 293 14 36 501 6 480 3.01e-35 138
Msa0873070 AT1G07250.1 30.909 275 166 6 241 502 210 473 4.15e-35 137
Msa0873070 AT4G15260.1 26.862 376 229 7 151 502 2 355 4.28e-35 135
Msa0873070 AT3G21750.1 25.737 509 299 14 32 502 2 469 2.26e-34 135
Msa0873070 AT5G49690.1 25.478 471 294 17 34 485 10 442 2.58e-34 135
Msa0873070 AT1G07260.1 28.623 276 172 6 241 502 208 472 4.10e-34 134
Msa0873070 AT5G65550.1 27.119 472 294 15 32 485 7 446 6.14e-34 134
Msa0873070 AT1G07240.1 29.032 279 172 7 240 502 208 476 3.82e-33 132
Msa0873070 AT5G12890.1 27.788 529 288 25 25 504 1 484 2.09e-27 115
Msa0873070 AT4G01070.2 29.042 334 198 10 30 356 4 305 5.10e-25 106
Msa0873070 AT1G06000.1 28.975 283 172 10 239 503 164 435 7.83e-24 104
Msa0873070 AT2G22590.1 26.477 491 278 16 25 477 1 446 6.86e-23 102
Msa0873070 AT5G54010.1 26.350 463 282 21 32 483 4 418 1.69e-19 91.7
Msa0873070 AT4G34135.2 26.377 345 211 10 30 356 7 326 2.54e-19 89.7
Msa0873070 AT5G53990.1 27.483 433 244 18 34 452 6 382 5.97e-19 89.7
Msa0873070 AT4G27570.1 25.116 430 267 17 32 452 5 388 2.08e-18 88.2
Msa0873070 AT1G64910.1 26.914 431 249 18 34 452 6 382 2.11e-18 88.2
Msa0873070 AT3G29630.1 24.124 485 305 17 32 501 4 440 2.96e-17 84.7
Msa0873070 AT4G27560.1 25.581 430 265 19 32 452 5 388 3.27e-17 84.3
Msa0873070 AT5G54060.1 30.769 234 137 8 252 472 219 440 1.75e-15 79.3
Msa0873070 AT4G09500.2 23.974 463 288 18 32 478 4 418 2.74e-15 78.6
Msa0873070 AT2G22930.1 26.820 261 159 8 253 501 197 437 2.91e-15 78.6
Msa0873070 AT4G09500.1 28.652 178 115 5 311 478 218 393 3.29e-15 78.2
Msa0873070 AT3G29630.2 28.856 201 126 5 312 501 220 414 4.22e-15 77.8
Msa0873070 AT1G50580.1 31.469 143 92 3 312 452 245 383 5.49e-14 74.3
Msa0873070 AT2G23210.1 25.828 302 186 11 25 321 1 269 1.61e-13 71.6
Msa0873070 AT1G64920.1 26.316 247 140 9 253 478 197 422 4.66e-13 71.6

Find 115 sgRNAs with CRISPR-Local

Find 227 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATCTAACAAATGGATATT+TGG 0.229612 6_1:-8726878 Msa0873070:CDS
GCAAGAGTTCCTAAACTAAA+TGG 0.236326 6_1:-8725860 Msa0873070:three_prime_UTR
ATTGATCAATTTGTGGAGTT+TGG 0.264442 6_1:+8726611 None:intergenic
AACATGCACTGGCTGGAAAA+AGG 0.279272 6_1:+8728309 None:intergenic
TTACGTTCCTTTGTAGAAAA+AGG 0.284079 6_1:-8728266 Msa0873070:CDS
ACTTTACATATTAAAGTTGT+AGG 0.291682 6_1:+8725777 None:intergenic
GCAAAACTTCTTCACCTTAG+AGG 0.292624 6_1:-8728656 Msa0873070:CDS
ATTGATCAATTGGATTCTTT+AGG 0.307043 6_1:-8726598 Msa0873070:CDS
TTTCCTTCTCTTTACACCTT+TGG 0.312627 6_1:-8726655 Msa0873070:CDS
ATTCTTTAGGTTCCAACATA+TGG 0.312880 6_1:-8726585 Msa0873070:CDS
ATTTGTAATGAATGGGAGAT+TGG 0.315917 6_1:-8726172 Msa0873070:CDS
GGAGTTTGGTTTAATAATAA+AGG 0.327599 6_1:+8726625 None:intergenic
AACTCCACAAATTGATCAAT+TGG 0.329261 6_1:-8726608 Msa0873070:CDS
ACTAAAGTAGATTGGATTCC+AGG 0.336076 6_1:-8726853 Msa0873070:CDS
AGGACATTGTTGACTATATC+AGG 0.339946 6_1:-8726810 Msa0873070:CDS
GTTAGAGTTTGCTTGGGGTT+TGG 0.344193 6_1:-8726461 Msa0873070:CDS
TTATTCAAACCATTTAGTTT+AGG 0.346436 6_1:+8725851 None:intergenic
TTACATCAATTAAACTCAAT+AGG 0.348247 6_1:+8725898 None:intergenic
CAAATAAGTCTACAGTTTGT+TGG 0.355700 6_1:+8726190 None:intergenic
CTTGTAAGAAGTTCACAAAA+AGG 0.373692 6_1:+8728437 None:intergenic
TGGTTTGAATAAATGCATAT+TGG 0.374170 6_1:-8725840 Msa0873070:three_prime_UTR
TCAGAAAATAAGCAAGTAAC+TGG 0.379190 6_1:+8728389 None:intergenic
ATTTGGAAACTAAAGTAGAT+TGG 0.379465 6_1:-8726861 Msa0873070:CDS
AGGTTATGTAAAAGCCTCTA+AGG 0.385615 6_1:+8728642 None:intergenic
GGATTTATATGTCCTTGAAA+TGG 0.391790 6_1:+8728692 None:intergenic
TCTATTGGTGTTAGACCATC+TGG 0.392456 6_1:+8728527 None:intergenic
TCAGTTGTTTATGTGAATTT+CGG 0.393015 6_1:-8726514 Msa0873070:CDS
GTAGACTTATTTGTAATGAA+TGG 0.401455 6_1:-8726180 Msa0873070:CDS
GCGGACACCAACTCACTATT+AGG 0.411800 6_1:+8726335 None:intergenic
TACATCAATTAAACTCAATA+GGG 0.417477 6_1:+8725899 None:intergenic
GTTAATGAAATTTCAGATAG+AGG 0.417787 6_1:-8726358 Msa0873070:CDS
AACAACTGATCCTGGTTCCT+TGG 0.422428 6_1:+8726528 None:intergenic
GAATGTAAAGAGAGAGGAGG+TGG 0.424697 6_1:-8726134 Msa0873070:CDS
AAGTCTAACATAAAATCATT+TGG 0.425125 6_1:+8726778 None:intergenic
TTGATTCCAGCTCCATTTCA+AGG 0.427559 6_1:-8728704 Msa0873070:CDS
GGTATCTTCTTTCCATATGT+TGG 0.428372 6_1:+8726573 None:intergenic
ACATCACCATCACCTTCTAT+TGG 0.429732 6_1:+8728512 None:intergenic
GAAACTGTTAGAGTTTGCTT+GGG 0.433505 6_1:-8726467 Msa0873070:CDS
AGAAACTGTTAGAGTTTGCT+TGG 0.438481 6_1:-8726468 Msa0873070:CDS
TAGACTTATTTGTAATGAAT+GGG 0.441983 6_1:-8726179 Msa0873070:CDS
AAAACCAGGGATACCATCTA+AGG 0.446365 6_1:+8728565 None:intergenic
ACAACTTTAATATGTAAAGT+AGG 0.447539 6_1:-8725774 None:intergenic
TGGTTTAATAATAAAGGTAA+AGG 0.452564 6_1:+8726631 None:intergenic
GATGAGAGTTATCTAACAAA+TGG 0.452799 6_1:-8726886 Msa0873070:CDS
GGTTTAATAATAAAGGTAAA+GGG 0.454554 6_1:+8726632 None:intergenic
AGAGGTGCAAATGCCTTAGA+TGG 0.454934 6_1:-8728578 Msa0873070:CDS
GAATCCAATTGATCAATTTG+TGG 0.457976 6_1:+8726604 None:intergenic
GAGCCACCAGTGACAAGATC+AGG 0.460149 6_1:+8726403 None:intergenic
CAACTTTAATATGTAAAGTA+GGG 0.461592 6_1:-8725773 None:intergenic
TCTCTTCAGTCATAACTGTA+AGG 0.463036 6_1:+8726488 None:intergenic
AGGAAAGAAGATGAGGCAAA+AGG 0.473475 6_1:-8726077 Msa0873070:CDS
TTTGTAATGAATGGGAGATT+GGG 0.482130 6_1:-8726171 Msa0873070:CDS
TGGTGTTAGACCATCTGGTA+TGG 0.484791 6_1:+8728532 None:intergenic
AATAACAAACATGCACTGGC+TGG 0.491580 6_1:+8728302 None:intergenic
GCGGAGGAGAACACGAGACC+TGG 0.500888 6_1:-8726034 Msa0873070:CDS
TTAAATCATCCTTCAGTTGG+TGG 0.509343 6_1:-8726301 Msa0873070:CDS
GATGGTCTAACACCAATAGA+AGG 0.509410 6_1:-8728524 Msa0873070:CDS
ACCGAGTGTCTTGAATGGCT+TGG 0.512661 6_1:-8726553 Msa0873070:CDS
TTCACATAAACAACTGATCC+TGG 0.513151 6_1:+8726520 None:intergenic
ATATGTCCTTGAAATGGAGC+TGG 0.513623 6_1:+8728698 None:intergenic
TCTTGAATGGCTTGGATCCA+AGG 0.514918 6_1:-8726545 Msa0873070:CDS
ACTCAATAACAAACATGCAC+TGG 0.517110 6_1:+8728298 None:intergenic
GAAGCTTGTCAATGAATTGA+TGG 0.517372 6_1:-8726110 Msa0873070:CDS
CTGGAGTTCCAATGTTGTGT+TGG 0.524933 6_1:-8726231 Msa0873070:CDS
AATAGTGAGTTGGTGTCCGC+AGG 0.527162 6_1:-8726332 Msa0873070:CDS
ACCACTGAAAGCATATGTGC+TGG 0.528505 6_1:-8726250 Msa0873070:CDS
ATTAGGCCTGATCTTGTCAC+TGG 0.532084 6_1:-8726409 Msa0873070:CDS
TTCATGTATGAACAACCTCC+AGG 0.539287 6_1:+8726016 None:intergenic
AATGCCTTAGATGGTATCCC+TGG 0.539882 6_1:-8728569 Msa0873070:CDS
TTGAGCTTTACTATACAAGC+TGG 0.547927 6_1:-8728359 Msa0873070:CDS
GAACTTGGACAAATTGATCA+AGG 0.549138 6_1:-8725996 Msa0873070:CDS
TCTTATAGATTGAGCAAGAG+AGG 0.551944 6_1:+8728475 None:intergenic
GCAAGTAACTGGTGGAACAT+TGG 0.552903 6_1:+8728400 None:intergenic
CGAGTTGAAGAAGAAGGCGG+AGG 0.561557 6_1:-8726050 Msa0873070:CDS
AGGCCTGATCTTGTCACTGG+TGG 0.562973 6_1:-8726406 Msa0873070:CDS
GGGCCAAAGGTGTAAAGAGA+AGG 0.565444 6_1:+8726652 None:intergenic
GGTGGATTCTTGACTCATTG+TGG 0.565798 6_1:-8726283 Msa0873070:CDS
AGGTTGTTCATACATGAACT+TGG 0.567337 6_1:-8726011 Msa0873070:CDS
AGCTTTGAAACCATACCAGA+TGG 0.567356 6_1:-8728542 Msa0873070:CDS
CTTATAGATTGAGCAAGAGA+GGG 0.567769 6_1:+8728476 None:intergenic
AAGATACCGAGTGTCTTGAA+TGG 0.570424 6_1:-8726558 Msa0873070:CDS
GAAAATAAGCAAGTAACTGG+TGG 0.570636 6_1:+8728392 None:intergenic
GGCAATCGAGTTGAAGAAGA+AGG 0.570682 6_1:-8726056 Msa0873070:CDS
GTAAAGAGAAGGAAACATAG+AGG 0.571836 6_1:+8726663 None:intergenic
GATTCTTGACTCATTGTGGA+TGG 0.573721 6_1:-8726279 Msa0873070:CDS
TGGCTTGGATCCAAGGAACC+AGG 0.575286 6_1:-8726538 Msa0873070:CDS
TAATGAATGGGAGATTGGGA+TGG 0.580439 6_1:-8726167 Msa0873070:CDS
TGATACGAATGTAAAGAGAG+AGG 0.582082 6_1:-8726140 Msa0873070:CDS
TGATTTAAAACTTGCTCCTG+CGG 0.586588 6_1:+8726316 None:intergenic
AAAGGTCTCACGCCACTCAA+AGG 0.587766 6_1:-8728248 Msa0873070:intron
TAATAAAGGTAAAGGGCCAA+AGG 0.596160 6_1:+8726639 None:intergenic
GTTAGACTTTGTAATTGATG+TGG 0.596354 6_1:-8726764 Msa0873070:CDS
CTTAACTTAGTACCTTTGAG+TGG 0.597041 6_1:+8728236 None:intergenic
TCCAAGCCATTCAAGACACT+CGG 0.597867 6_1:+8726552 None:intergenic
ATTGTATTCAGTGTTGACAA+AGG 0.603382 6_1:+8728622 None:intergenic
ATGGTTTCAAAGCTAAAACC+AGG 0.604560 6_1:+8728551 None:intergenic
ATAGAGGCCTAATAGTGAGT+TGG 0.607238 6_1:-8726342 Msa0873070:CDS
CTTGTCAATGAATTGATGGT+GGG 0.608074 6_1:-8726106 Msa0873070:CDS
AAACGTTTGCTCAAATCAAG+AGG 0.611549 6_1:-8728596 Msa0873070:CDS
AACTTTAATATGTAAAGTAG+GGG 0.616880 6_1:-8725772 None:intergenic
GGGAGAAAGGAAAGAAGATG+AGG 0.617307 6_1:-8726084 Msa0873070:CDS
GCTGGAATCAACACAGCATG+TGG 0.617848 6_1:+8728716 None:intergenic
TACGAATGTAAAGAGAGAGG+AGG 0.622959 6_1:-8726137 Msa0873070:CDS
TCCAGCACATATGCTTTCAG+TGG 0.624115 6_1:+8726249 None:intergenic
GTCAAGAATCCACCAACTGA+AGG 0.638437 6_1:+8726292 None:intergenic
AAACTGTTAGAGTTTGCTTG+GGG 0.652785 6_1:-8726466 Msa0873070:CDS
CTAACACCAATAGAAGGTGA+TGG 0.660471 6_1:-8728518 Msa0873070:CDS
TGGTTTCAAAGCTAAAACCA+GGG 0.660700 6_1:+8728552 None:intergenic
GCTTGTCAATGAATTGATGG+TGG 0.664053 6_1:-8726107 Msa0873070:CDS
TGTCAATGAATTGATGGTGG+GGG 0.672527 6_1:-8726104 Msa0873070:CDS
TGCTATGTGTGCAAGATACG+AGG 0.686647 6_1:+8728790 None:intergenic
AATCGAGTTGAAGAAGAAGG+CGG 0.693405 6_1:-8726053 Msa0873070:CDS
TTGTCAATGAATTGATGGTG+GGG 0.702295 6_1:-8726105 Msa0873070:CDS
GAGGAGAACACGAGACCTGG+AGG 0.702713 6_1:-8726031 Msa0873070:CDS
CTTGGACAAATTGATCAAGG+AGG 0.753709 6_1:-8725993 Msa0873070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+CGG + chr6_1:8726638-8726657 None:intergenic 0.0%
!!! TTTTATATACTTATTAGTTA+GGG + chr6_1:8727470-8727489 None:intergenic 10.0%
!!! TTTTTATATACTTATTAGTT+AGG + chr6_1:8727471-8727490 None:intergenic 10.0%
!!! ATATACATTTTAATTGAAAA+AGG + chr6_1:8727583-8727602 None:intergenic 10.0%
!!! TTTTTCAATTAAAATGTATA+TGG - chr6_1:8727582-8727601 Msa0873070:intron 10.0%
!! AAAAAATAAGTTCAAAATTT+GGG + chr6_1:8727666-8727685 None:intergenic 10.0%
!!! AAATTTTGAACTTATTTTTT+CGG - chr6_1:8727666-8727685 Msa0873070:intron 10.0%
!! AATAGAGAATTATCAAAAAT+GGG - chr6_1:8725889-8725908 Msa0873070:intron 15.0%
!!! AATAAGAGTTTTTAATTTGA+CGG + chr6_1:8727216-8727235 None:intergenic 15.0%
!! GAAAAAATAAGTTCAAAATT+TGG + chr6_1:8727667-8727686 None:intergenic 15.0%
!! GCTTTAATAGAGAAAAAAAA+AGG + chr6_1:8725813-8725832 None:intergenic 20.0%
!! CAATAGAGAATTATCAAAAA+TGG - chr6_1:8725888-8725907 Msa0873070:intron 20.0%
!!! TCTAAAGTAAAACATATGAT+TGG + chr6_1:8726536-8726555 None:intergenic 20.0%
!!! GAAAATTATTTTCACACTTT+AGG + chr6_1:8727505-8727524 None:intergenic 20.0%
!!! TGTGAAAATAATTTTCTTGA+AGG - chr6_1:8727509-8727528 Msa0873070:intron 20.0%
!! ATTAGGTAAAAAGTCTATTA+GGG + chr6_1:8727618-8727637 None:intergenic 20.0%
!! TATAAAATTAGGAGTTCATT+AGG + chr6_1:8727635-8727654 None:intergenic 20.0%
!!! ACTCCTAATTTTATATTTTG+CGG - chr6_1:8727640-8727659 Msa0873070:intron 20.0%
!! TTATCTAACAAATGGATATT+TGG - chr6_1:8727769-8727788 Msa0873070:intron 20.0%
!! AAGTCTAACATAAAATCATT+TGG + chr6_1:8727872-8727891 None:intergenic 20.0%
!! GGTTTAATAATAAAGGTAAA+GGG + chr6_1:8728018-8728037 None:intergenic 20.0%
!! TGGTTTAATAATAAAGGTAA+AGG + chr6_1:8728019-8728038 None:intergenic 20.0%
!! TAGACTTATTTGTAATGAAT+GGG - chr6_1:8728468-8728487 Msa0873070:CDS 20.0%
!! TACATCAATTAAACTCAATA+GGG + chr6_1:8728751-8728770 None:intergenic 20.0%
!! TTACATCAATTAAACTCAAT+AGG + chr6_1:8728752-8728771 None:intergenic 20.0%
!!! TTATTCAAACCATTTAGTTT+AGG + chr6_1:8728799-8728818 None:intergenic 20.0%
!! ACTTTACATATTAAAGTTGT+AGG + chr6_1:8728873-8728892 None:intergenic 20.0%
! TAGAAGAAATAGAGGAAAAT+GGG - chr6_1:8726817-8726836 Msa0873070:CDS 25.0%
! GAGGAACTAAAAAATTGTAT+TGG - chr6_1:8726895-8726914 Msa0873070:intron 25.0%
! GAACTAAAAAATTGTATTGG+AGG - chr6_1:8726898-8726917 Msa0873070:intron 25.0%
! TAAAAAATTGTATTGGAGGA+GGG - chr6_1:8726902-8726921 Msa0873070:intron 25.0%
!!! AGTTTTATCGATCAAATTTG+TGG + chr6_1:8727252-8727271 None:intergenic 25.0%
! GAAAGAAACATACATGTATA+AGG + chr6_1:8727326-8727345 None:intergenic 25.0%
!! GTGATAGTTTTTATCATGTT+AGG - chr6_1:8727531-8727550 Msa0873070:intron 25.0%
! CATTAGGTAAAAAGTCTATT+AGG + chr6_1:8727619-8727638 None:intergenic 25.0%
! AAGTTAATAGCTTGATTACA+TGG + chr6_1:8727723-8727742 None:intergenic 25.0%
! ATTTGGAAACTAAAGTAGAT+TGG - chr6_1:8727786-8727805 Msa0873070:intron 25.0%
!! GGAGTTTGGTTTAATAATAA+AGG + chr6_1:8728025-8728044 None:intergenic 25.0%
! ATTGATCAATTGGATTCTTT+AGG - chr6_1:8728049-8728068 Msa0873070:intron 25.0%
! TCAGTTGTTTATGTGAATTT+CGG - chr6_1:8728133-8728152 Msa0873070:intron 25.0%
! CAAAAAAGGTTTATTGCAAT+TGG + chr6_1:8728212-8728231 None:intergenic 25.0%
!!! ATTGCAATAAACCTTTTTTG+TGG - chr6_1:8728212-8728231 Msa0873070:intron 25.0%
! GTTAATGAAATTTCAGATAG+AGG - chr6_1:8728289-8728308 Msa0873070:CDS 25.0%
! GTAGACTTATTTGTAATGAA+TGG - chr6_1:8728467-8728486 Msa0873070:CDS 25.0%
! TGGTTTGAATAAATGCATAT+TGG - chr6_1:8728807-8728826 Msa0873070:CDS 25.0%
GGATTTATATGTCCTTGAAA+TGG + chr6_1:8725958-8725977 None:intergenic 30.0%
!! AGTTTTGCTAGTTTGAACAA+TGG + chr6_1:8725979-8725998 None:intergenic 30.0%
!! ATTGTATTCAGTGTTGACAA+AGG + chr6_1:8726028-8726047 None:intergenic 30.0%
GAAGTTCACAAAAAGGTTTA+AGG + chr6_1:8726206-8726225 None:intergenic 30.0%
CTTGTAAGAAGTTCACAAAA+AGG + chr6_1:8726213-8726232 None:intergenic 30.0%
TCAGAAAATAAGCAAGTAAC+TGG + chr6_1:8726261-8726280 None:intergenic 30.0%
CTGGAAAAAGGATAACATTT+GGG + chr6_1:8726329-8726348 None:intergenic 30.0%
TTACGTTCCTTTGTAGAAAA+AGG - chr6_1:8726381-8726400 Msa0873070:CDS 30.0%
GTAGAAGAAATAGAGGAAAA+TGG - chr6_1:8726816-8726835 Msa0873070:CDS 30.0%
!!! TTTTTTAGTTCCTCCAAATG+AGG + chr6_1:8726889-8726908 None:intergenic 30.0%
CTAAAAAATTGTATTGGAGG+AGG - chr6_1:8726901-8726920 Msa0873070:intron 30.0%
ATATATCGAGAGTTACTCTT+AGG + chr6_1:8727145-8727164 None:intergenic 30.0%
TTTATCGATCAAATTTGTGG+AGG + chr6_1:8727249-8727268 None:intergenic 30.0%
ATGTATGTATGACCTTCAAA+GGG - chr6_1:8727398-8727417 Msa0873070:intron 30.0%
!!! AACTTATTTTTTCGGACCTA+GGG - chr6_1:8727674-8727693 Msa0873070:intron 30.0%
GATGAGAGTTATCTAACAAA+TGG - chr6_1:8727761-8727780 Msa0873070:intron 30.0%
TTCCAGGTTTGAAAAACTTT+CGG - chr6_1:8727810-8727829 Msa0873070:intron 30.0%
TTTGAAAAACTTTCGGTTGA+AGG - chr6_1:8727817-8727836 Msa0873070:intron 30.0%
GTTAGACTTTGTAATTGATG+TGG - chr6_1:8727883-8727902 Msa0873070:intron 30.0%
ATTGATCAATTTGTGGAGTT+TGG + chr6_1:8728039-8728058 None:intergenic 30.0%
AACTCCACAAATTGATCAAT+TGG - chr6_1:8728039-8728058 Msa0873070:intron 30.0%
GAATCCAATTGATCAATTTG+TGG + chr6_1:8728046-8728065 None:intergenic 30.0%
! ATTCTTTAGGTTCCAACATA+TGG - chr6_1:8728062-8728081 Msa0873070:intron 30.0%
!!! AACCTTTTTTGTGGATCATT+AGG - chr6_1:8728221-8728240 Msa0873070:intron 30.0%
!! GTTTTAAATCATCCTTCAGT+TGG - chr6_1:8728343-8728362 Msa0873070:CDS 30.0%
CAAATAAGTCTACAGTTTGT+TGG + chr6_1:8728460-8728479 None:intergenic 30.0%
ATTTGTAATGAATGGGAGAT+TGG - chr6_1:8728475-8728494 Msa0873070:CDS 30.0%
TTTGTAATGAATGGGAGATT+GGG - chr6_1:8728476-8728495 Msa0873070:CDS 30.0%
AGGTTATGTAAAAGCCTCTA+AGG + chr6_1:8726008-8726027 None:intergenic 35.0%
AAACGTTTGCTCAAATCAAG+AGG - chr6_1:8726051-8726070 Msa0873070:CDS 35.0%
TGGTTTCAAAGCTAAAACCA+GGG + chr6_1:8726098-8726117 None:intergenic 35.0%
ATGGTTTCAAAGCTAAAACC+AGG + chr6_1:8726099-8726118 None:intergenic 35.0%
CTTATAGATTGAGCAAGAGA+GGG + chr6_1:8726174-8726193 None:intergenic 35.0%
TCTTATAGATTGAGCAAGAG+AGG + chr6_1:8726175-8726194 None:intergenic 35.0%
GAAAATAAGCAAGTAACTGG+TGG + chr6_1:8726258-8726277 None:intergenic 35.0%
TTGAGCTTTACTATACAAGC+TGG - chr6_1:8726288-8726307 Msa0873070:CDS 35.0%
GCTGGAAAAAGGATAACATT+TGG + chr6_1:8726330-8726349 None:intergenic 35.0%
ACTCAATAACAAACATGCAC+TGG + chr6_1:8726352-8726371 None:intergenic 35.0%
CTTAACTTAGTACCTTTGAG+TGG + chr6_1:8726414-8726433 None:intergenic 35.0%
TGAGCAAGTAGAAGAAATAG+AGG - chr6_1:8726809-8726828 Msa0873070:CDS 35.0%
AGAAATAGAGGAAAATGGGA+AGG - chr6_1:8726821-8726840 Msa0873070:CDS 35.0%
AATACAAAACCCTCCTCATT+TGG - chr6_1:8726873-8726892 Msa0873070:CDS 35.0%
AAGGAAAGGAAAGACTTTGA+GGG + chr6_1:8727099-8727118 None:intergenic 35.0%
!! GTTACTCTTAGGCTTTGTTT+GGG + chr6_1:8727134-8727153 None:intergenic 35.0%
!! AGTTACTCTTAGGCTTTGTT+TGG + chr6_1:8727135-8727154 None:intergenic 35.0%
CATGTATGTATGACCTTCAA+AGG - chr6_1:8727397-8727416 Msa0873070:intron 35.0%
GGGCCGCAAAATATAAAATT+AGG + chr6_1:8727646-8727665 None:intergenic 35.0%
!!! GAACTTATTTTTTCGGACCT+AGG - chr6_1:8727673-8727692 Msa0873070:intron 35.0%
ACTAAAGTAGATTGGATTCC+AGG - chr6_1:8727794-8727813 Msa0873070:intron 35.0%
!! AACCGAAAGTTTTTCAAACC+TGG + chr6_1:8727815-8727834 None:intergenic 35.0%
! AGGACATTGTTGACTATATC+AGG - chr6_1:8727837-8727856 Msa0873070:intron 35.0%
GTAAAGAGAAGGAAACATAG+AGG + chr6_1:8727987-8728006 None:intergenic 35.0%
TTTCCTTCTCTTTACACCTT+TGG - chr6_1:8727992-8728011 Msa0873070:intron 35.0%
TAATAAAGGTAAAGGGCCAA+AGG + chr6_1:8728011-8728030 None:intergenic 35.0%
GGTATCTTCTTTCCATATGT+TGG + chr6_1:8728077-8728096 None:intergenic 35.0%
TTCACATAAACAACTGATCC+TGG + chr6_1:8728130-8728149 None:intergenic 35.0%
TCTCTTCAGTCATAACTGTA+AGG + chr6_1:8728162-8728181 None:intergenic 35.0%
! AGAAACTGTTAGAGTTTGCT+TGG - chr6_1:8728179-8728198 Msa0873070:intron 35.0%
! GAAACTGTTAGAGTTTGCTT+GGG - chr6_1:8728180-8728199 Msa0873070:intron 35.0%
! AAACTGTTAGAGTTTGCTTG+GGG - chr6_1:8728181-8728200 Msa0873070:intron 35.0%
!! TGGCTCAAAAGTTTTGTCAT+CGG - chr6_1:8728261-8728280 Msa0873070:CDS 35.0%
! TGATTTAAAACTTGCTCCTG+CGG + chr6_1:8728334-8728353 None:intergenic 35.0%
TTAAATCATCCTTCAGTTGG+TGG - chr6_1:8728346-8728365 Msa0873070:CDS 35.0%
AAAAATGGCCAACACAACAT+TGG + chr6_1:8728427-8728446 None:intergenic 35.0%
TGATACGAATGTAAAGAGAG+AGG - chr6_1:8728507-8728526 Msa0873070:CDS 35.0%
GAAGCTTGTCAATGAATTGA+TGG - chr6_1:8728537-8728556 Msa0873070:CDS 35.0%
! CTTGTCAATGAATTGATGGT+GGG - chr6_1:8728541-8728560 Msa0873070:CDS 35.0%
!! TTGTCAATGAATTGATGGTG+GGG - chr6_1:8728542-8728561 Msa0873070:CDS 35.0%
AGGTTGTTCATACATGAACT+TGG - chr6_1:8728636-8728655 Msa0873070:CDS 35.0%
GAACTTGGACAAATTGATCA+AGG - chr6_1:8728651-8728670 Msa0873070:CDS 35.0%
GCAAGAGTTCCTAAACTAAA+TGG - chr6_1:8728787-8728806 Msa0873070:CDS 35.0%
TTGATTCCAGCTCCATTTCA+AGG - chr6_1:8725943-8725962 Msa0873070:three_prime_UTR 40.0%
ATATGTCCTTGAAATGGAGC+TGG + chr6_1:8725952-8725971 None:intergenic 40.0%
GCAAAACTTCTTCACCTTAG+AGG - chr6_1:8725991-8726010 Msa0873070:CDS 40.0%
AAAACCAGGGATACCATCTA+AGG + chr6_1:8726085-8726104 None:intergenic 40.0%
!! AGCTTTGAAACCATACCAGA+TGG - chr6_1:8726105-8726124 Msa0873070:CDS 40.0%
!! TCTATTGGTGTTAGACCATC+TGG + chr6_1:8726123-8726142 None:intergenic 40.0%
GATGGTCTAACACCAATAGA+AGG - chr6_1:8726123-8726142 Msa0873070:CDS 40.0%
CTAACACCAATAGAAGGTGA+TGG - chr6_1:8726129-8726148 Msa0873070:CDS 40.0%
ACATCACCATCACCTTCTAT+TGG + chr6_1:8726138-8726157 None:intergenic 40.0%
! AATAACAAACATGCACTGGC+TGG + chr6_1:8726348-8726367 None:intergenic 40.0%
! CGTGAGACCTTTTTCTACAA+AGG + chr6_1:8726391-8726410 None:intergenic 40.0%
CAAACTCGCAAACAAAGTCT+TGG + chr6_1:8726753-8726772 None:intergenic 40.0%
! CAAGACTTTGTTTGCGAGTT+TGG - chr6_1:8726751-8726770 Msa0873070:CDS 40.0%
! ACTTTGTTTGCGAGTTTGGA+GGG - chr6_1:8726755-8726774 Msa0873070:CDS 40.0%
AGGAGAAGACTTGGGAAAAA+AGG - chr6_1:8726784-8726803 Msa0873070:CDS 40.0%
AATAGAGGAAAATGGGAAGG+AGG - chr6_1:8726824-8726843 Msa0873070:CDS 40.0%
ATAGAGGAAAATGGGAAGGA+GGG - chr6_1:8726825-8726844 Msa0873070:CDS 40.0%
TTAGTTCCTCCAAATGAGGA+GGG + chr6_1:8726885-8726904 None:intergenic 40.0%
! TTTAGTTCCTCCAAATGAGG+AGG + chr6_1:8726886-8726905 None:intergenic 40.0%
! ATTGTATTGGAGGAGGGTTT+TGG - chr6_1:8726908-8726927 Msa0873070:intron 40.0%
! TTGTATTGGAGGAGGGTTTT+GGG - chr6_1:8726909-8726928 Msa0873070:intron 40.0%
AGGAAAGGAAAGACTTTGAG+GGG + chr6_1:8727098-8727117 None:intergenic 40.0%
GAAGGAAAGGAAAGACTTTG+AGG + chr6_1:8727100-8727119 None:intergenic 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG + chr6_1:8727127-8727146 None:intergenic 40.0%
TTAGTTAGGGCCCAAACTAT+AGG + chr6_1:8727457-8727476 None:intergenic 40.0%
!!! TTATTTTTTCGGACCTAGGG+CGG - chr6_1:8727677-8727696 Msa0873070:intron 40.0%
AAGATACCGAGTGTCTTGAA+TGG - chr6_1:8728089-8728108 Msa0873070:intron 40.0%
GGCCTAATGATCCACAAAAA+AGG + chr6_1:8728226-8728245 None:intergenic 40.0%
ATAGAGGCCTAATAGTGAGT+TGG - chr6_1:8728305-8728324 Msa0873070:CDS 40.0%
GATTCTTGACTCATTGTGGA+TGG - chr6_1:8728368-8728387 Msa0873070:CDS 40.0%
GTTGGCTGATCAGTGAAAAA+TGG + chr6_1:8728442-8728461 None:intergenic 40.0%
TAATGAATGGGAGATTGGGA+TGG - chr6_1:8728480-8728499 Msa0873070:CDS 40.0%
TACGAATGTAAAGAGAGAGG+AGG - chr6_1:8728510-8728529 Msa0873070:CDS 40.0%
GCTTGTCAATGAATTGATGG+TGG - chr6_1:8728540-8728559 Msa0873070:CDS 40.0%
!! TGTCAATGAATTGATGGTGG+GGG - chr6_1:8728543-8728562 Msa0873070:CDS 40.0%
AGGAAAGAAGATGAGGCAAA+AGG - chr6_1:8728570-8728589 Msa0873070:CDS 40.0%
!! AATCGAGTTGAAGAAGAAGG+CGG - chr6_1:8728594-8728613 Msa0873070:CDS 40.0%
TTCATGTATGAACAACCTCC+AGG + chr6_1:8728634-8728653 None:intergenic 40.0%
CTTGGACAAATTGATCAAGG+AGG - chr6_1:8728654-8728673 Msa0873070:CDS 40.0%
TGCTATGTGTGCAAGATACG+AGG + chr6_1:8725860-8725879 None:intergenic 45.0%
! AGAGGTGCAAATGCCTTAGA+TGG - chr6_1:8726069-8726088 Msa0873070:CDS 45.0%
AATGCCTTAGATGGTATCCC+TGG - chr6_1:8726078-8726097 Msa0873070:CDS 45.0%
! TGGTGTTAGACCATCTGGTA+TGG + chr6_1:8726118-8726137 None:intergenic 45.0%
GCAAGTAACTGGTGGAACAT+TGG + chr6_1:8726250-8726269 None:intergenic 45.0%
!! AACATGCACTGGCTGGAAAA+AGG + chr6_1:8726341-8726360 None:intergenic 45.0%
! GACTTTGTTTGCGAGTTTGG+AGG - chr6_1:8726754-8726773 Msa0873070:CDS 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG - chr6_1:8726756-8726775 Msa0873070:CDS 45.0%
AAAATGGGAAGGAGGGCTTT+GGG - chr6_1:8726832-8726851 Msa0873070:CDS 45.0%
ACAAAACCCTCCTCATTTGG+AGG - chr6_1:8726876-8726895 Msa0873070:CDS 45.0%
! TGTATTGGAGGAGGGTTTTG+GGG - chr6_1:8726910-8726929 Msa0873070:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + chr6_1:8727122-8727141 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + chr6_1:8727123-8727142 None:intergenic 45.0%
GACCACCAGAATCTCAGAAA+CGG + chr6_1:8727424-8727443 None:intergenic 45.0%
! TCTGAGATTCTGGTGGTCTA+CGG - chr6_1:8727426-8727445 Msa0873070:intron 45.0%
TACGGGCGAACCTATAGTTT+GGG - chr6_1:8727444-8727463 Msa0873070:intron 45.0%
TGATTACATGGCCGTATCTG+AGG + chr6_1:8727711-8727730 None:intergenic 45.0%
TCCAAGCCATTCAAGACACT+CGG + chr6_1:8728098-8728117 None:intergenic 45.0%
! TCTTGAATGGCTTGGATCCA+AGG - chr6_1:8728102-8728121 Msa0873070:intron 45.0%
AACAACTGATCCTGGTTCCT+TGG + chr6_1:8728122-8728141 None:intergenic 45.0%
! GTTAGAGTTTGCTTGGGGTT+TGG - chr6_1:8728186-8728205 Msa0873070:intron 45.0%
ATTAGGCCTGATCTTGTCAC+TGG - chr6_1:8728238-8728257 Msa0873070:intron 45.0%
GTCAAGAATCCACCAACTGA+AGG + chr6_1:8728358-8728377 None:intergenic 45.0%
! GGTGGATTCTTGACTCATTG+TGG - chr6_1:8728364-8728383 Msa0873070:CDS 45.0%
! ACCACTGAAAGCATATGTGC+TGG - chr6_1:8728397-8728416 Msa0873070:CDS 45.0%
TCCAGCACATATGCTTTCAG+TGG + chr6_1:8728401-8728420 None:intergenic 45.0%
CTGGAGTTCCAATGTTGTGT+TGG - chr6_1:8728416-8728435 Msa0873070:CDS 45.0%
GAATGTAAAGAGAGAGGAGG+TGG - chr6_1:8728513-8728532 Msa0873070:CDS 45.0%
GGGAGAAAGGAAAGAAGATG+AGG - chr6_1:8728563-8728582 Msa0873070:CDS 45.0%
!! GGCAATCGAGTTGAAGAAGA+AGG - chr6_1:8728591-8728610 Msa0873070:CDS 45.0%
!!! TGTATTTTTTTTTTTTTTTT+AGG - chr6_1:8727362-8727381 Msa0873070:intron 5.0%
!!! GTATTTTTTTTTTTTTTTTA+GGG - chr6_1:8727363-8727382 Msa0873070:intron 5.0%
GCTGGAATCAACACAGCATG+TGG + chr6_1:8725934-8725953 None:intergenic 50.0%
AAAGGTCTCACGCCACTCAA+AGG - chr6_1:8726399-8726418 Msa0873070:CDS 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG - chr6_1:8726761-8726780 Msa0873070:CDS 50.0%
GAAAATGGGAAGGAGGGCTT+TGG - chr6_1:8726831-8726850 Msa0873070:CDS 50.0%
AAATGGGAAGGAGGGCTTTG+GGG - chr6_1:8726833-8726852 Msa0873070:CDS 50.0%
!! GTATTGGAGGAGGGTTTTGG+GGG - chr6_1:8726911-8726930 Msa0873070:intron 50.0%
!!! TATTGGAGGAGGGTTTTGGG+GGG - chr6_1:8726912-8726931 Msa0873070:intron 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + chr6_1:8727124-8727143 None:intergenic 50.0%
TCTCAGAAACGGCCCTTTGA+AGG + chr6_1:8727413-8727432 None:intergenic 50.0%
!! AAGGGCCGTTTCTGAGATTC+TGG - chr6_1:8727416-8727435 Msa0873070:intron 50.0%
CTGAGATTCTGGTGGTCTAC+GGG - chr6_1:8727427-8727446 Msa0873070:intron 50.0%
CTACGGGCGAACCTATAGTT+TGG - chr6_1:8727443-8727462 Msa0873070:intron 50.0%
! GGGCCAAAGGTGTAAAGAGA+AGG + chr6_1:8727998-8728017 None:intergenic 50.0%
ACCGAGTGTCTTGAATGGCT+TGG - chr6_1:8728094-8728113 Msa0873070:intron 50.0%
GCGGACACCAACTCACTATT+AGG + chr6_1:8728315-8728334 None:intergenic 50.0%
!! AATAGTGAGTTGGTGTCCGC+AGG - chr6_1:8728315-8728334 Msa0873070:CDS 50.0%
!! GAATTGATGGTGGGGGAGAA+AGG - chr6_1:8728550-8728569 Msa0873070:CDS 50.0%
GTTTGCGAGTTTGGAGGGGA+AGG - chr6_1:8726760-8726779 Msa0873070:CDS 55.0%
GGGAAGGGAGGAGAAGACTT+GGG - chr6_1:8726776-8726795 Msa0873070:CDS 55.0%
! AATGGGAAGGAGGGCTTTGG+GGG - chr6_1:8726834-8726853 Msa0873070:CDS 55.0%
!!! ATTGGAGGAGGGTTTTGGGG+GGG - chr6_1:8726913-8726932 Msa0873070:intron 55.0%
!!! GGTTTTGGGGGGGTTTTGGA+GGG - chr6_1:8726923-8726942 Msa0873070:intron 55.0%
GGAGTTTGGAGGGGAAGGAA+AGG + chr6_1:8727113-8727132 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+AGG + chr6_1:8727118-8727137 None:intergenic 55.0%
!! GGCCGTTTCTGAGATTCTGG+TGG - chr6_1:8727419-8727438 Msa0873070:intron 55.0%
! ACATGGCCGTATCTGAGGCA+GGG + chr6_1:8727706-8727725 None:intergenic 55.0%
! TACATGGCCGTATCTGAGGC+AGG + chr6_1:8727707-8727726 None:intergenic 55.0%
! TGGCTTGGATCCAAGGAACC+AGG - chr6_1:8728109-8728128 Msa0873070:intron 55.0%
AGGCCTGATCTTGTCACTGG+TGG - chr6_1:8728241-8728260 Msa0873070:intron 55.0%
GAGCCACCAGTGACAAGATC+AGG + chr6_1:8728247-8728266 None:intergenic 55.0%
! CGAGTTGAAGAAGAAGGCGG+AGG - chr6_1:8728597-8728616 Msa0873070:CDS 55.0%
GGGGAAGGGAGGAGAAGACT+TGG - chr6_1:8726775-8726794 Msa0873070:CDS 60.0%
!! ATGGGAAGGAGGGCTTTGGG+GGG - chr6_1:8726835-8726854 Msa0873070:CDS 60.0%
!!! GGAGGGTTTTGGGGGGGTTT+TGG - chr6_1:8726919-8726938 Msa0873070:intron 60.0%
!!! GGGTTTTGGGGGGGTTTTGG+AGG - chr6_1:8726922-8726941 Msa0873070:intron 60.0%
GAGGAGAACACGAGACCTGG+AGG - chr6_1:8728616-8728635 Msa0873070:CDS 60.0%
GCGAGTTTGGAGGGGAAGGG+AGG - chr6_1:8726764-8726783 Msa0873070:CDS 65.0%
CGGTCGCCCTGCCTCAGATA+CGG - chr6_1:8727697-8727716 Msa0873070:intron 65.0%
GCGGAGGAGAACACGAGACC+TGG - chr6_1:8728613-8728632 Msa0873070:CDS 65.0%
TGAGGCAGGGCGACCGCCCT+AGG + chr6_1:8727693-8727712 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 8725775 8728894 8725775 ID=Msa0873070;Name=Msa0873070
chr6_1 mRNA 8725775 8728894 8725775 ID=Msa0873070-mRNA-1;Parent=Msa0873070;Name=Msa0873070-mRNA-1;_AED=0.33;_eAED=0.33;_QI=60|1|1|1|0.5|0.33|3|184|504
chr6_1 exon 8725775 8725881 8725775 ID=Msa0873070-mRNA-1:exon:2664;Parent=Msa0873070-mRNA-1
chr6_1 exon 8725902 8726907 8725902 ID=Msa0873070-mRNA-1:exon:2663;Parent=Msa0873070-mRNA-1
chr6_1 exon 8728249 8728894 8728249 ID=Msa0873070-mRNA-1:exon:2662;Parent=Msa0873070-mRNA-1
chr6_1 five_prime_UTR 8728835 8728894 8728835 ID=Msa0873070-mRNA-1:five_prime_utr;Parent=Msa0873070-mRNA-1
chr6_1 CDS 8728249 8728834 8728249 ID=Msa0873070-mRNA-1:cds;Parent=Msa0873070-mRNA-1
chr6_1 CDS 8725979 8726907 8725979 ID=Msa0873070-mRNA-1:cds;Parent=Msa0873070-mRNA-1
chr6_1 three_prime_UTR 8725902 8725978 8725902 ID=Msa0873070-mRNA-1:three_prime_utr;Parent=Msa0873070-mRNA-1
chr6_1 three_prime_UTR 8725775 8725881 8725775 ID=Msa0873070-mRNA-1:three_prime_utr;Parent=Msa0873070-mRNA-1
Gene Sequence

>Msa0873070

ATGCTTATCACTTGTTTCTCAACCTCGTATCTTGCACACATAGCAATAACATTCAATAGAGAATTATCAAAAATGGGAAACTTTGCAAACAGAAAACCACATGCTGTGTTGATTCCAGCTCCATTTCAAGGACATATAAATCCATTGTTCAAACTAGCAAAACTTCTTCACCTTAGAGGCTTTTACATAACCTTTGTCAACACTGAATACAATCATAAACGTTTGCTCAAATCAAGAGGTGCAAATGCCTTAGATGGTATCCCTGGTTTTAGCTTTGAAACCATACCAGATGGTCTAACACCAATAGAAGGTGATGGTGATGTTAGTCAAGACATACCCTCTCTTGCTCAATCTATAAGAAAGAACTTCCTTAAACCTTTTTGTGAACTTCTTACAAGACTTAATCACTCTGCCAATGTTCCACCAGTTACTTGCTTATTTTCTGATTATTTTTTGAGCTTTACTATACAAGCTGGTGAAGAATTTGCAATCCCAAATGTTATCCTTTTTCCAGCCAGTGCATGTTTGTTATTGAGTATTCTTCACTTACGTTCCTTTGTAGAAAAAGGTCTCACGCCACTCAAAGATGAGAGTTATCTAACAAATGGATATTTGGAAACTAAAGTAGATTGGATTCCAGGTTTGAAAAACTTTCGGTTGAAGGACATTGTTGACTATATCAGGACAACAGATCCAAATGATTTTATGTTAGACTTTGTAATTGATGTGGCTGATAAAGTTCATAAAAACTCTACTATTATTTTGAATACTTTCAATGAACTTGAGAGTGATGTAATAGATGCTCTCTCCTCTATGTTTCCTTCTCTTTACACCTTTGGCCCTTTACCTTTATTATTAAACCAAACTCCACAAATTGATCAATTGGATTCTTTAGGTTCCAACATATGGAAAGAAGATACCGAGTGTCTTGAATGGCTTGGATCCAAGGAACCAGGATCAGTTGTTTATGTGAATTTCGGCAGCCTTACAGTTATGACTGAAGAGAAACTGTTAGAGTTTGCTTGGGGTTTGGCCAATTGCAATAAACCTTTTTTGTGGATCATTAGGCCTGATCTTGTCACTGGTGGCTCAAAAGTTTTGTCATCGGAGTTTGTTAATGAAATTTCAGATAGAGGCCTAATAGTGAGTTGGTGTCCGCAGGAGCAAGTTTTAAATCATCCTTCAGTTGGTGGATTCTTGACTCATTGTGGATGGAACTCAACCACTGAAAGCATATGTGCTGGAGTTCCAATGTTGTGTTGGCCATTTTTCACTGATCAGCCAACAAACTGTAGACTTATTTGTAATGAATGGGAGATTGGGATGGAAATTGATACGAATGTAAAGAGAGAGGAGGTGGAGAAGCTTGTCAATGAATTGATGGTGGGGGAGAAAGGAAAGAAGATGAGGCAAAAGGCAATCGAGTTGAAGAAGAAGGCGGAGGAGAACACGAGACCTGGAGGTTGTTCATACATGAACTTGGACAAATTGATCAAGGAGGTGTTGCTTAAATAA
Protein sequence

>Msa0873070

MLITCFSTSYLAHIAITFNRELSKMGNFANRKPHAVLIPAPFQGHINPLFKLAKLLHLRGFYITFVNTEYNHKRLLKSRGANALDGIPGFSFETIPDGLTPIEGDGDVSQDIPSLAQSIRKNFLKPFCELLTRLNHSANVPPVTCLFSDYFLSFTIQAGEEFAIPNVILFPASACLLLSILHLRSFVEKGLTPLKDESYLTNGYLETKVDWIPGLKNFRLKDIVDYIRTTDPNDFMLDFVIDVADKVHKNSTIILNTFNELESDVIDALSSMFPSLYTFGPLPLLLNQTPQIDQLDSLGSNIWKEDTECLEWLGSKEPGSVVYVNFGSLTVMTEEKLLEFAWGLANCNKPFLWIIRPDLVTGGSKVLSSEFVNEISDRGLIVSWCPQEQVLNHPSVGGFLTHCGWNSTTESICAGVPMLCWPFFTDQPTNCRLICNEWEIGMEIDTNVKREEVEKLVNELMVGEKGKKMRQKAIELKKKAEENTRPGGCSYMNLDKLIKEVLLK*