AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0606250


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0606250 MtrunA17_Chr4g0035791 91.058 548 24 2 1 523 1 548 0.0 966
Msa0606250 MtrunA17_Chr4g0035811 88.300 547 36 2 1 523 34 576 0.0 936
Msa0606250 MtrunA17_Chr4g0035761 76.036 555 95 6 1 522 1 550 0.0 804
Msa0606250 MtrunA17_Chr4g0035741 69.819 497 117 3 57 523 57 550 0.0 694
Msa0606250 MtrunA17_Chr4g0035751 64.552 536 151 6 1 510 1 523 0.0 670
Msa0606250 MtrunA17_Chr5g0448591 24.593 492 283 17 71 505 83 543 1.49e-17 85.9
Msa0606250 MtrunA17_Chr2g0328761 24.304 395 244 9 105 452 36 422 2.59e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0606250 AT2G21340.1 60.672 506 159 4 57 523 55 559 0.0 619
Msa0606250 AT2G21340.2 60.277 506 158 5 57 523 55 556 0.0 610
Msa0606250 AT4G39030.1 62.555 454 145 1 94 522 89 542 0.0 581
Msa0606250 AT2G38330.1 24.561 513 312 17 15 502 6 468 3.06e-18 88.2

Find 152 sgRNAs with CRISPR-Local

Find 448 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTTTCTCTTTCTATTTC+TGG 0.054952 4_2:-52387299 Msa0606250:five_prime_UTR
ATGTTCTCATTCTTGGAATT+TGG 0.106484 4_2:-52381408 Msa0606250:three_prime_UTR
AATTGAAGACTGCATAATTT+TGG 0.181236 4_2:-52381716 Msa0606250:exon
AGCTGTATTCGGGTTGCTTT+TGG 0.197977 4_2:-52383387 Msa0606250:CDS
AGCAAATATGTTCTCATTCT+TGG 0.200815 4_2:-52381415 Msa0606250:three_prime_UTR
TGACATTAATTATATTCTTA+TGG 0.218480 4_2:+52381304 None:intergenic
CCCTCCAGGCCGACTGTTGC+AGG 0.218536 4_2:+52383148 None:intergenic
CTGGACCTGCTATTGGTCTT+TGG 0.222999 4_2:-52386892 Msa0606250:CDS
GCATGGCCGTGTTTACTTAT+TGG 0.227532 4_2:-52385316 Msa0606250:CDS
CTAACTATTGGAGCTGTATT+CGG 0.232506 4_2:-52383398 Msa0606250:CDS
GCCACTGGGGTATAGTTATT+TGG 0.233210 4_2:-52381486 Msa0606250:three_prime_UTR
ATCGATTGCTACTTCGAATA+TGG 0.233585 4_2:-52386664 Msa0606250:CDS
TGCTCTCCTCTATTTCTAAA+TGG 0.238561 4_2:+52381434 None:intergenic
GCTGCTGCCAGTATTATAAA+TGG 0.247426 4_2:-52384730 Msa0606250:CDS
ATTTGTGACATTGATGTTAA+AGG 0.250101 4_2:-52384062 Msa0606250:intron
AAGGAAATTGTATTGTTTAC+TGG 0.254805 4_2:-52386911 Msa0606250:CDS
CTTGGAATTTGGGTTCAAAA+TGG 0.256390 4_2:-52381397 Msa0606250:three_prime_UTR
CTAAGGTCTCTTCTAACTAT+TGG 0.258425 4_2:-52383410 Msa0606250:CDS
TCAATTGAACTTGCTGCTTT+AGG 0.260915 4_2:-52386815 Msa0606250:intron
CTGTGCAGATATTTAAACTA+TGG 0.264751 4_2:-52384691 Msa0606250:CDS
TCGGAAACTGTGCGGGGAAA+TGG 0.271411 4_2:-52381567 Msa0606250:three_prime_UTR
TGTTCTCATTCTTGGAATTT+GGG 0.281954 4_2:-52381407 Msa0606250:three_prime_UTR
ACCAATTCCATTTATAATAC+TGG 0.285900 4_2:+52384723 None:intergenic
TGCTACTGCCCTTGCTAAAC+AGG 0.288099 4_2:-52386640 Msa0606250:intron
TGTTAAGCATGTTACAAAAT+AGG 0.300501 4_2:-52381637 Msa0606250:three_prime_UTR
GCATAAATGATTGGGCAGTT+TGG 0.309238 4_2:+52383726 None:intergenic
TAGAAGAAACCTCGCTGATT+TGG 0.310022 4_2:+52386993 None:intergenic
TTGGGGACCCTTGAAGGCTT+TGG 0.310354 4_2:-52384752 Msa0606250:CDS
CGGAAACTGTGCGGGGAAAT+GGG 0.313766 4_2:-52381566 Msa0606250:three_prime_UTR
CATAAATGATTGGGCAGTTT+GGG 0.318301 4_2:+52383727 None:intergenic
TCCTCCCACCTTCCCTTCTA+AGG 0.321409 4_2:-52387144 Msa0606250:CDS
ATGGGATCGCTGGGGCTGCA+TGG 0.325681 4_2:-52384672 Msa0606250:CDS
TGGTAGTGTTCTTCCTTAGA+AGG 0.328033 4_2:+52387131 None:intergenic
CTCATTGATACTGCTGTTGT+TGG 0.336581 4_2:-52386848 Msa0606250:CDS
AACTGGTTGAGCAGAGTATA+TGG 0.336997 4_2:-52386943 Msa0606250:CDS
TTGTTTACTGGACCTGCTAT+TGG 0.337810 4_2:-52386899 Msa0606250:CDS
GTCTTGGTATGAAAGATTCT+TGG 0.344370 4_2:-52384771 Msa0606250:CDS
TAACTATTGGAGCTGTATTC+GGG 0.354893 4_2:-52383397 Msa0606250:CDS
GTGATCAAGTGTGGTGCCAC+TGG 0.372752 4_2:-52381501 Msa0606250:three_prime_UTR
CAGATCCTATCCAGCAGATA+TGG 0.375163 4_2:-52381946 Msa0606250:CDS
GACAGGCTCGGTCGCTTCTA+AGG 0.385164 4_2:-52383427 Msa0606250:intron
TGGGTTCAAAATGGCTTGTA+AGG 0.388067 4_2:-52381388 Msa0606250:three_prime_UTR
TAATGCATTGGTTTGTTGAA+TGG 0.390169 4_2:+52387107 None:intergenic
CGGCCTGGAGGGAACATTGC+TGG 0.395766 4_2:-52383137 Msa0606250:intron
TCTTGGTATGAAAGATTCTT+GGG 0.396058 4_2:-52384770 Msa0606250:CDS
TTTCACTTGCTGGATTTCAA+TGG 0.400259 4_2:-52381906 Msa0606250:CDS
GCTATTGGTCTTTGGTTATG+TGG 0.403668 4_2:-52386884 Msa0606250:CDS
TGGGATCGCTGGGGCTGCAT+GGG 0.408841 4_2:-52384671 Msa0606250:CDS
GGCAGCAGCCAAAGCCTTCA+AGG 0.419588 4_2:+52384744 None:intergenic
TCAACTCAGGCATAAATGAT+TGG 0.421244 4_2:+52383717 None:intergenic
AACATCAATGTCACAAATAC+AGG 0.423376 4_2:+52384067 None:intergenic
AGAAGAAGAAGTGAAGGAAC+TGG 0.429921 4_2:-52386960 Msa0606250:CDS
TTCACTTGCTGGATTTCAAT+GGG 0.432604 4_2:-52381905 Msa0606250:intron
GTATGGAGTAAATCGGAGTT+TGG 0.433384 4_2:-52383693 Msa0606250:CDS
GCCAGTATTATAAATGGAAT+TGG 0.442168 4_2:-52384724 Msa0606250:CDS
AGATTCTTGGGGACCCTTGA+AGG 0.447575 4_2:-52384758 Msa0606250:CDS
GCTTTGCCATTTAGAAATAG+AGG 0.450678 4_2:-52381440 Msa0606250:three_prime_UTR
CACACCTGCAACAGTCGGCC+TGG 0.466186 4_2:-52383152 Msa0606250:CDS
TATTTAAACTATGGGATCGC+TGG 0.466318 4_2:-52384682 Msa0606250:CDS
TGTCGATACAATTCAGTGCT+TGG 0.467061 4_2:-52381612 Msa0606250:three_prime_UTR
CGCAGCTAATACTTATGTCC+AGG 0.472482 4_2:-52385642 Msa0606250:intron
TTTATGCCTGAGTTGATGTA+TGG 0.474513 4_2:-52383710 Msa0606250:CDS
AAGATATACGTTCAAGGCGG+TGG 0.474818 4_2:+52381525 None:intergenic
GCCTTGCAAACCATATCTGC+TGG 0.476879 4_2:+52381936 None:intergenic
AAATGCCATTGGGAGATAGA+AGG 0.478517 4_2:+52381775 None:intergenic
TGTGCAGATATTTAAACTAT+GGG 0.482960 4_2:-52384690 Msa0606250:CDS
TCCTGGATGACCATTTGATC+AGG 0.486992 4_2:+52383317 None:intergenic
ACCTGATCAAATGGTCATCC+AGG 0.487046 4_2:-52383318 Msa0606250:CDS
AGTTGTATCGGAAACTGTGC+GGG 0.487415 4_2:-52381574 Msa0606250:three_prime_UTR
TCATCGATTGTGGATGGGAA+TGG 0.489279 4_2:+52381279 None:intergenic
TGGGGCTGCATGGGCTACAT+TGG 0.491626 4_2:-52384662 Msa0606250:CDS
AGTTGATGTATGGAGTAAAT+CGG 0.492680 4_2:-52383700 Msa0606250:CDS
TTGTTGTAACATCTGTTACT+TGG 0.499431 4_2:-52383361 Msa0606250:CDS
CAACTCAGGCATAAATGATT+GGG 0.499704 4_2:+52383718 None:intergenic
CTGCAGGTGCTGAGTTGTAT+CGG 0.500020 4_2:-52381586 Msa0606250:three_prime_UTR
TGATCAAGTGTGGTGCCACT+GGG 0.500320 4_2:-52381500 Msa0606250:three_prime_UTR
TTGGTGTTAGATTCGAGGGT+TGG 0.502304 4_2:-52385338 Msa0606250:intron
TTCCGAGTATAAAATGCCAT+TGG 0.504973 4_2:+52381764 None:intergenic
TTTCCTTCACCATTCCTTCA+GGG 0.508678 4_2:-52384123 Msa0606250:CDS
TCCGAGTATAAAATGCCATT+GGG 0.511889 4_2:+52381765 None:intergenic
TTCAAAATGGCTTGTAAGGT+AGG 0.514855 4_2:-52381384 Msa0606250:three_prime_UTR
GGAAACTGTGCGGGGAAATG+GGG 0.518399 4_2:-52381565 Msa0606250:three_prime_UTR
CTTCACCATTCCTTCAGGGA+AGG 0.518414 4_2:-52384119 Msa0606250:CDS
TGAAAATCATCGATTGTGGA+TGG 0.519635 4_2:+52381273 None:intergenic
ATTTAAACTATGGGATCGCT+GGG 0.521866 4_2:-52384681 Msa0606250:CDS
GCAAACCATATCTGCTGGAT+AGG 0.523619 4_2:+52381941 None:intergenic
TTGTGATTATGCAGATGCAT+AGG 0.528902 4_2:-52383207 Msa0606250:intron
CCTGCAACAGTCGGCCTGGA+GGG 0.530670 4_2:-52383148 Msa0606250:CDS
TGGGAGATAGAAGGCGCAGA+AGG 0.531589 4_2:+52381784 None:intergenic
GAGTATATGGATTCAGATGA+AGG 0.533192 4_2:-52386930 Msa0606250:CDS
GTCTGTAACGTGGAATCCGC+GGG 0.538341 4_2:+52387329 None:intergenic
ATCACAAAGATATACGTTCA+AGG 0.539081 4_2:+52381519 None:intergenic
GATTGGGCAGTTTGGGAGAG+AGG 0.541089 4_2:+52383734 None:intergenic
TTAGGCGCAACAACGCTAGC+AGG 0.548010 4_2:-52385824 Msa0606250:intron
TATGTTTGTGTAGGATAGGG+AGG 0.548718 4_2:-52385924 Msa0606250:intron
AAGCCACCATAAAAGTAGAA+AGG 0.550147 4_2:+52381459 None:intergenic
AAATTCCTTCCCTGAAGGAA+TGG 0.556149 4_2:+52384114 None:intergenic
GTTAGATTCGAGGGTTGGCA+TGG 0.557043 4_2:-52385333 Msa0606250:intron
GTGTTCTTCCTTAGAAGGGA+AGG 0.558264 4_2:+52387136 None:intergenic
TCCAGCAGATATGGTTTGCA+AGG 0.560688 4_2:-52381937 Msa0606250:CDS
GACAGAAATTCCTTCCCTGA+AGG 0.564886 4_2:+52384109 None:intergenic
GCATTATTATATCCTCGAGC+AGG 0.565045 4_2:-52387090 Msa0606250:CDS
GGTAGTGTTCTTCCTTAGAA+GGG 0.565504 4_2:+52387132 None:intergenic
AAGAACAAACCTGTTTAGCA+AGG 0.565978 4_2:+52386631 None:intergenic
ATTCAGTGCTTGGAAACTGC+AGG 0.566478 4_2:-52381602 Msa0606250:three_prime_UTR
TCGAGGATATAATAATGCAT+TGG 0.566810 4_2:+52387095 None:intergenic
ATACCAGCAATGTTCCCTCC+AGG 0.568305 4_2:+52383134 None:intergenic
TATTGGGTTAGCATGTGGCT+CGG 0.569231 4_2:-52385870 Msa0606250:CDS
GAAACTGTGCGGGGAAATGG+GGG 0.573752 4_2:-52381564 Msa0606250:three_prime_UTR
GCAGCAGCCAAAGCCTTCAA+GGG 0.575285 4_2:+52384745 None:intergenic
GAAAATCATCGATTGTGGAT+GGG 0.576202 4_2:+52381274 None:intergenic
GATATGGTTTGCAAGGCTGT+TGG 0.577198 4_2:-52381930 Msa0606250:CDS
TCCTTAGAAGGGAAGGTGGG+AGG 0.582462 4_2:+52387143 None:intergenic
CTGCGCCTTCTATCTCCCAA+TGG 0.586913 4_2:-52381780 Msa0606250:CDS
GCATTGGTTTGTTGAATGGA+TGG 0.590335 4_2:+52387111 None:intergenic
TTCTTCCTTAGAAGGGAAGG+TGG 0.595058 4_2:+52387139 None:intergenic
CTTCCCTGAAGGAATGGTGA+AGG 0.598270 4_2:+52384120 None:intergenic
ACCTGCAACAGTCGGCCTGG+AGG 0.603468 4_2:-52383149 Msa0606250:CDS
GATCGATTGCTCAAAGTGCA+AGG 0.606336 4_2:-52385294 Msa0606250:intron
GAGCAAAGCTCTAAATGACA+AGG 0.606474 4_2:-52384158 Msa0606250:CDS
CCTCTGAAAATCATCGATTG+TGG 0.610071 4_2:+52381269 None:intergenic
GATACTGCTGTTGTTGGTCA+AGG 0.613645 4_2:-52386842 Msa0606250:CDS
GGGAGATAGAAGGCGCAGAA+GGG 0.619859 4_2:+52381785 None:intergenic
AGAACAAACCTGTTTAGCAA+GGG 0.621535 4_2:+52386632 None:intergenic
TGGACATAAGTATTAGCTGC+GGG 0.623250 4_2:+52385644 None:intergenic
AGTAAATCGGAGTTTGGCAA+AGG 0.624488 4_2:-52383687 Msa0606250:intron
TACATGTTATGCGCAATATG+TGG 0.626684 4_2:-52383761 Msa0606250:CDS
GGTCTGTAACGTGGAATCCG+CGG 0.629745 4_2:+52387328 None:intergenic
TTTACTCCATACATCAACTC+AGG 0.632825 4_2:+52383704 None:intergenic
TCTTCCTTAGAAGGGAAGGT+GGG 0.639612 4_2:+52387140 None:intergenic
CATAACCAAAGACCAATAGC+AGG 0.639786 4_2:+52386887 None:intergenic
GAAGCGACTGTTCCTGCTCG+AGG 0.643099 4_2:+52387078 None:intergenic
AAAACGAGTGGTCTGTAACG+TGG 0.648411 4_2:+52387319 None:intergenic
ATCGATCCAATAAGTAAACA+CGG 0.649213 4_2:+52385310 None:intergenic
AGAAAGAGAAAGAAAACGAG+TGG 0.653179 4_2:+52387307 None:intergenic
AGCAAAGCTCTAAATGACAA+GGG 0.653537 4_2:-52384157 Msa0606250:CDS
ACATTTGGTTATCATTCCCG+CGG 0.656594 4_2:-52387345 None:intergenic
GGAGGAAACGAAGAGGTGCG+TGG 0.661214 4_2:+52387161 None:intergenic
TATATCTTTGTGATCAAGTG+TGG 0.669008 4_2:-52381510 Msa0606250:three_prime_UTR
CTTGGTATGAAAGATTCTTG+GGG 0.676112 4_2:-52384769 Msa0606250:CDS
CTGGTCACACCTGCAACAGT+CGG 0.690613 4_2:-52383157 Msa0606250:CDS
GAAGGTGGGAGGAAACGAAG+AGG 0.694033 4_2:+52387154 None:intergenic
CTGGACATAAGTATTAGCTG+CGG 0.697551 4_2:+52385643 None:intergenic
TGATCAAATGGTCATCCAGG+AGG 0.702782 4_2:-52383315 Msa0606250:intron
GAGTTGTATCGGAAACTGTG+CGG 0.703127 4_2:-52381575 Msa0606250:three_prime_UTR
ACCAAATAACTATACCCCAG+TGG 0.721142 4_2:+52381485 None:intergenic
GTATCAATGAGACTCATCAA+CGG 0.734956 4_2:+52386860 None:intergenic
GTTGTATCGGAAACTGTGCG+GGG 0.735175 4_2:-52381573 Msa0606250:three_prime_UTR
GATCAAGTGTGGTGCCACTG+GGG 0.737199 4_2:-52381499 Msa0606250:three_prime_UTR
TTTAAACTATGGGATCGCTG+GGG 0.771769 4_2:-52384680 Msa0606250:CDS
TGGCTTGTAAGGTAGGAATG+TGG 0.773808 4_2:-52381377 Msa0606250:three_prime_UTR
ACAAAGATATACGTTCAAGG+CGG 0.792492 4_2:+52381522 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATCATAAAATAATTTA+TGG - chr4_2:52383065-52383084 Msa0606250:intron 10.0%
!!! TTTTTAATTTATGTTCAATT+TGG - chr4_2:52383440-52383459 Msa0606250:intron 10.0%
!! TTTCTATCCAATTAAAAAAT+GGG + chr4_2:52382013-52382032 None:intergenic 15.0%
!!! TTTTCTATCCAATTAAAAAA+TGG + chr4_2:52382014-52382033 None:intergenic 15.0%
!! TTTATTCTATATCATTAGTT+TGG + chr4_2:52382111-52382130 None:intergenic 15.0%
!! ATAATCTTAATTGAAATTGA+AGG + chr4_2:52383023-52383042 None:intergenic 15.0%
!!! TTTCTTGTTATAGTAAATAA+AGG - chr4_2:52383114-52383133 Msa0606250:intron 15.0%
!! TATATATTGAAATTGATCAA+AGG - chr4_2:52383211-52383230 Msa0606250:intron 15.0%
!! TTAATTATTGGTATCATATA+TGG - chr4_2:52384363-52384382 Msa0606250:intron 15.0%
!!! TATTTTAGTACATTGAAAAT+AGG + chr4_2:52384394-52384413 None:intergenic 15.0%
!! TAAAAGATATAAAATCACTA+TGG + chr4_2:52385677-52385696 None:intergenic 15.0%
!! TGACATTAATTATATTCTTA+TGG + chr4_2:52387313-52387332 None:intergenic 15.0%
!! AAAGAATCAGAGAAAAATAT+GGG + chr4_2:52381347-52381366 None:intergenic 20.0%
!! AAAAGAATCAGAGAAAAATA+TGG + chr4_2:52381348-52381367 None:intergenic 20.0%
!!! TACTGTTTTTTGTGATTATT+TGG - chr4_2:52381908-52381927 Msa0606250:CDS 20.0%
!!! ACTGTTTTTTGTGATTATTT+GGG - chr4_2:52381909-52381928 Msa0606250:CDS 20.0%
!!! CTTTATTCCCATTTTTTAAT+TGG - chr4_2:52382003-52382022 Msa0606250:intron 20.0%
!! TAGAATAAAGATAATTCGTA+TGG - chr4_2:52382122-52382141 Msa0606250:intron 20.0%
!! AATAATGCCAAAAAATTTAC+TGG + chr4_2:52382597-52382616 None:intergenic 20.0%
!! CAAACATATTAACTAATCAA+AGG + chr4_2:52382678-52382697 None:intergenic 20.0%
!! ATTAGTTAATATGTTTGTGT+AGG - chr4_2:52382681-52382700 Msa0606250:intron 20.0%
!! TTACTATTATCCCAAAAAAA+GGG + chr4_2:52382847-52382866 None:intergenic 20.0%
!! ATTACTATTATCCCAAAAAA+AGG + chr4_2:52382848-52382867 None:intergenic 20.0%
!!! TACTTTATTTAAAGAAGCAT+TGG + chr4_2:52383148-52383167 None:intergenic 20.0%
!! AACAGTTTAAAGAACAATTT+AGG + chr4_2:52383654-52383673 None:intergenic 20.0%
!! TCTCATTTAATTCATATTCT+TGG - chr4_2:52383800-52383819 Msa0606250:intron 20.0%
!! TACATTGTAAACAAGTAATT+AGG - chr4_2:52384007-52384026 Msa0606250:intron 20.0%
!! ACATTGTAAACAAGTAATTA+GGG - chr4_2:52384008-52384027 Msa0606250:intron 20.0%
!! AGCACATAATATGTAAATAT+TGG - chr4_2:52384035-52384054 Msa0606250:intron 20.0%
!! TTGTATTAAGCTTACTAATT+AGG - chr4_2:52384246-52384265 Msa0606250:intron 20.0%
!! CACACATCATAATTAATTAT+TGG - chr4_2:52384351-52384370 Msa0606250:intron 20.0%
!! GAACTTTCAGTTATATTTAA+AGG + chr4_2:52384629-52384648 None:intergenic 20.0%
!!! TATATATTTTGCTACATCAA+TGG - chr4_2:52384679-52384698 Msa0606250:CDS 20.0%
!!! ATATATTTTGCTACATCAAT+GGG - chr4_2:52384680-52384699 Msa0606250:CDS 20.0%
!! TTAAAATATGTTTGTGAGTT+TGG + chr4_2:52384801-52384820 None:intergenic 20.0%
!!! TTTAACTCAACTCTTATTTT+AGG - chr4_2:52384816-52384835 Msa0606250:intron 20.0%
!! AAAACGATACTATATATATG+AGG + chr4_2:52384996-52385015 None:intergenic 20.0%
!! TGAATATACATAACAATGTA+TGG + chr4_2:52385141-52385160 None:intergenic 20.0%
!!! TTATTTTAGTGTTCTTATGT+TGG - chr4_2:52385535-52385554 Msa0606250:intron 20.0%
!!! CATTTTTATGCTAAAAATCT+AGG + chr4_2:52385604-52385623 None:intergenic 20.0%
!!! TGTTAACAACTTTATCTTTT+AGG + chr4_2:52385838-52385857 None:intergenic 20.0%
!! TTCAATTTGTCTATAATGAA+TGG - chr4_2:52385985-52386004 Msa0606250:intron 20.0%
!! ATAATGAATGGAAAAGAATA+TGG - chr4_2:52385997-52386016 Msa0606250:intron 20.0%
!! ATTAAATTGTCATGAATGTT+GGG + chr4_2:52386439-52386458 None:intergenic 20.0%
!! AATTAAATTGTCATGAATGT+TGG + chr4_2:52386440-52386459 None:intergenic 20.0%
! TTTCTTTCTCTTTCTATTTC+TGG - chr4_2:52381315-52381334 Msa0606250:three_prime_UTR 25.0%
! AAGGAAATTGTATTGTTTAC+TGG - chr4_2:52381703-52381722 Msa0606250:exon 25.0%
! TGAAATTGCACAATAATGTA+TGG - chr4_2:52381856-52381875 Msa0606250:intron 25.0%
! ATCAAAAGTCTTTCTTGTAA+TGG - chr4_2:52382288-52382307 Msa0606250:intron 25.0%
!! ATTTAAAGCAATGCATGATT+AGG - chr4_2:52382529-52382548 Msa0606250:intron 25.0%
!!! CAAAAGACCAGTAAATTTTT+TGG - chr4_2:52382587-52382606 Msa0606250:intron 25.0%
! ACATATTAACTAATCAAAGG+CGG + chr4_2:52382675-52382694 None:intergenic 25.0%
! TTAATATGTTTGTGTAGGAT+AGG - chr4_2:52382686-52382705 Msa0606250:intron 25.0%
! TAATATGTTTGTGTAGGATA+GGG - chr4_2:52382687-52382706 Msa0606250:intron 25.0%
!!! ATATCTGTCTTGCTTTTTAT+TGG - chr4_2:52382727-52382746 Msa0606250:intron 25.0%
!!! TATCTGTCTTGCTTTTTATT+GGG - chr4_2:52382728-52382747 Msa0606250:intron 25.0%
!!! CTTTTTTTCACAAGGTTATT+AGG - chr4_2:52382772-52382791 Msa0606250:intron 25.0%
! GTAATTCACTAATGCATAAA+TGG - chr4_2:52382863-52382882 Msa0606250:intron 25.0%
! TAAAACAATTCATCAGTCAT+GGG + chr4_2:52382902-52382921 None:intergenic 25.0%
! ATAAAACAATTCATCAGTCA+TGG + chr4_2:52382903-52382922 None:intergenic 25.0%
! TCAGAAAGAAAAAAAAAACC+TGG + chr4_2:52382993-52383012 None:intergenic 25.0%
! TATTGAAATTGATCAAAGGA+AGG - chr4_2:52383215-52383234 Msa0606250:intron 25.0%
!! TAGTAACACTGAATTTCTTT+TGG - chr4_2:52383257-52383276 Msa0606250:intron 25.0%
!! TAATAGTTGCTTGAAACTTT+TGG - chr4_2:52383478-52383497 Msa0606250:intron 25.0%
! ACCAATTCCATTTATAATAC+TGG + chr4_2:52383894-52383913 None:intergenic 25.0%
! TGTGCAGATATTTAAACTAT+GGG - chr4_2:52383924-52383943 Msa0606250:CDS 25.0%
! CAAAACACGTTAAAACATTT+CGG + chr4_2:52384117-52384136 None:intergenic 25.0%
!!! AATGTTTTAACGTGTTTTGA+AGG - chr4_2:52384118-52384137 Msa0606250:CDS 25.0%
! ATTTGTGACATTGATGTTAA+AGG - chr4_2:52384552-52384571 Msa0606250:intron 25.0%
! TACTATATATATGAGGTTGA+AGG + chr4_2:52384989-52385008 None:intergenic 25.0%
!!! AGTGGATTTTCATTTTATAG+AGG - chr4_2:52385035-52385054 Msa0606250:intron 25.0%
! ATCTACAATGTGAATTAGTA+AGG + chr4_2:52385113-52385132 None:intergenic 25.0%
! GTTGAATTTACAGGAAATAA+TGG + chr4_2:52385958-52385977 None:intergenic 25.0%
! AAGTACATATACATAAGAAG+CGG + chr4_2:52386093-52386112 None:intergenic 25.0%
! TTAAATTGTCATGAATGTTG+GGG + chr4_2:52386438-52386457 None:intergenic 25.0%
! TTTATAAGTTTGTCAATGAC+TGG - chr4_2:52386532-52386551 Msa0606250:intron 25.0%
! TTTGAATGGTCTAGTATTAT+TGG - chr4_2:52386564-52386583 Msa0606250:intron 25.0%
! CATATTGTGTTTATTAGGTT+CGG - chr4_2:52386796-52386815 Msa0606250:intron 25.0%
!! AATTGAAGACTGCATAATTT+TGG - chr4_2:52386898-52386917 Msa0606250:CDS 25.0%
! AATGTACCATGAACTAAAAA+TGG + chr4_2:52386928-52386947 None:intergenic 25.0%
! TGTTAAGCATGTTACAAAAT+AGG - chr4_2:52386977-52386996 Msa0606250:CDS 25.0%
CACTTCGAAGAAAACAAAAA+TGG - chr4_2:52381372-52381391 Msa0606250:three_prime_UTR 30.0%
!! TAATGCATTGGTTTGTTGAA+TGG + chr4_2:52381510-52381529 None:intergenic 30.0%
TCGAGGATATAATAATGCAT+TGG + chr4_2:52381522-52381541 None:intergenic 30.0%
! GCACAATAATGTATGGATTT+TGG - chr4_2:52381863-52381882 Msa0606250:intron 30.0%
TAATCACAAAAAACAGTAGC+AGG + chr4_2:52381906-52381925 None:intergenic 30.0%
TATTGATGAATATGCGTGAA+TGG - chr4_2:52382034-52382053 Msa0606250:intron 30.0%
ATTGATGAATATGCGTGAAT+GGG - chr4_2:52382035-52382054 Msa0606250:intron 30.0%
TTGTCATTGTTGGATGTATA+CGG + chr4_2:52382495-52382514 None:intergenic 30.0%
! TTTATGCACACACAACTTTT+AGG - chr4_2:52382639-52382658 Msa0606250:intron 30.0%
AAAACAATTCATCAGTCATG+GGG + chr4_2:52382901-52382920 None:intergenic 30.0%
AAGTAGACAACCTTTCAAAT+AGG - chr4_2:52383163-52383182 Msa0606250:CDS 30.0%
AAAGCAGAATCCTATTTGAA+AGG + chr4_2:52383176-52383195 None:intergenic 30.0%
! TTCAGTGTTACTAAATCAAG+CGG + chr4_2:52383250-52383269 None:intergenic 30.0%
ATCGATCCAATAAGTAAACA+CGG + chr4_2:52383307-52383326 None:intergenic 30.0%
TATCTGAGAAAAGTCATTCA+TGG + chr4_2:52383519-52383538 None:intergenic 30.0%
GTATACTATTGAGTGACAAA+AGG + chr4_2:52383550-52383569 None:intergenic 30.0%
AGCACATTAAACTATTCTCA+GGG + chr4_2:52383695-52383714 None:intergenic 30.0%
AAGCACATTAAACTATTCTC+AGG + chr4_2:52383696-52383715 None:intergenic 30.0%
TCTTGGTATGAAAGATTCTT+GGG - chr4_2:52383844-52383863 Msa0606250:intron 30.0%
GCCAGTATTATAAATGGAAT+TGG - chr4_2:52383890-52383909 Msa0606250:intron 30.0%
CTGTGCAGATATTTAAACTA+TGG - chr4_2:52383923-52383942 Msa0606250:CDS 30.0%
! ATAAGTTTGTTCGCATACTT+GGG + chr4_2:52383981-52384000 None:intergenic 30.0%
! TATAAGTTTGTTCGCATACT+TGG + chr4_2:52383982-52384001 None:intergenic 30.0%
!!! ACGTGTTTTGAAGGTTTTTA+TGG - chr4_2:52384127-52384146 Msa0606250:CDS 30.0%
!!! CGTGTTTTGAAGGTTTTTAT+GGG - chr4_2:52384128-52384147 Msa0606250:CDS 30.0%
!!! GTGTTTTGAAGGTTTTTATG+GGG - chr4_2:52384129-52384148 Msa0606250:CDS 30.0%
TTTGGATTATAGAATCCGAA+CGG + chr4_2:52384163-52384182 None:intergenic 30.0%
! AATATAGAAGCTTTAGCTCA+TGG + chr4_2:52384272-52384291 None:intergenic 30.0%
AACATCAATGTCACAAATAC+AGG + chr4_2:52384550-52384569 None:intergenic 30.0%
! AGTTGATGTATGGAGTAAAT+CGG - chr4_2:52384914-52384933 Msa0606250:intron 30.0%
! ATAGAGGATCACTTTCTTTT+TGG - chr4_2:52385051-52385070 Msa0606250:intron 30.0%
!!! TCACTTTCTTTTTGGTTTGA+AGG - chr4_2:52385059-52385078 Msa0606250:intron 30.0%
!!! CACTTTCTTTTTGGTTTGAA+GGG - chr4_2:52385060-52385079 Msa0606250:intron 30.0%
GTCAAGATACTATAAACTCA+GGG + chr4_2:52385170-52385189 None:intergenic 30.0%
TGTCAAGATACTATAAACTC+AGG + chr4_2:52385171-52385190 None:intergenic 30.0%
TGAGTTTATAGTATCTTGAC+AGG - chr4_2:52385170-52385189 Msa0606250:intron 30.0%
TTGTTGTAACATCTGTTACT+TGG - chr4_2:52385253-52385272 Msa0606250:intron 30.0%
TGATCAGGTGTAAAAATGTA+GGG + chr4_2:52385285-52385304 None:intergenic 30.0%
TTGATCAGGTGTAAAAATGT+AGG + chr4_2:52385286-52385305 None:intergenic 30.0%
! CATTTTTACACCTGATCAAA+TGG - chr4_2:52385287-52385306 Msa0606250:intron 30.0%
AAAAGAAGCCTTAATTCCAA+AGG + chr4_2:52385371-52385390 None:intergenic 30.0%
TCATGTTCGATTGGAATATT+AGG - chr4_2:52385505-52385524 Msa0606250:intron 30.0%
TTATGCTAAAAATCTAGGTC+AGG + chr4_2:52385599-52385618 None:intergenic 30.0%
!! ATTAGGATTTTCAAGAAGCT+TGG + chr4_2:52385638-52385657 None:intergenic 30.0%
AATCCTAATCTGTTTCACAT+AGG - chr4_2:52385649-52385668 Msa0606250:CDS 30.0%
!! TGAAATAGTCTTTGCTATTG+AGG - chr4_2:52385710-52385729 Msa0606250:intron 30.0%
CTACTAAATAGTTAAGGGTT+AGG + chr4_2:52385788-52385807 None:intergenic 30.0%
CAGAGCTACTAAATAGTTAA+GGG + chr4_2:52385793-52385812 None:intergenic 30.0%
GATAAAGTTGTTAACAAGAC+AGG - chr4_2:52385842-52385861 Msa0606250:CDS 30.0%
TTCCTGTAAATTCAACAGTT+TGG - chr4_2:52385962-52385981 Msa0606250:intron 30.0%
AACCAAACTGTTGAATTTAC+AGG + chr4_2:52385967-52385986 None:intergenic 30.0%
AGGATTAAGTTTGTAAGAAG+TGG + chr4_2:52386032-52386051 None:intergenic 30.0%
TCTTACAAACTTAATCCTCT+AGG - chr4_2:52386034-52386053 Msa0606250:intron 30.0%
TGTTTAAAGACTTCCTTACA+TGG - chr4_2:52386058-52386077 Msa0606250:intron 30.0%
TACATTGTCGTTACAACTAA+CGG + chr4_2:52386198-52386217 None:intergenic 30.0%
TGTAACGACAATGTAAGTAT+AGG - chr4_2:52386203-52386222 Msa0606250:intron 30.0%
! AGTCTCATATCGACTATAAA+AGG - chr4_2:52386278-52386297 Msa0606250:intron 30.0%
! CCTTAAGGCATTATGTATAT+GGG + chr4_2:52386333-52386352 None:intergenic 30.0%
! ACCTTAAGGCATTATGTATA+TGG + chr4_2:52386334-52386353 None:intergenic 30.0%
! TACATAATGCCTTAAGGTTT+TGG - chr4_2:52386336-52386355 Msa0606250:intron 30.0%
!! TATTGGTAACAACTTTTCCT+TGG - chr4_2:52386581-52386600 Msa0606250:intron 30.0%
AGGGACATATTGTGTTTATT+AGG - chr4_2:52386791-52386810 Msa0606250:intron 30.0%
!! TTATTAGGTTCGGTTTTCAT+CGG - chr4_2:52386806-52386825 Msa0606250:intron 30.0%
ATCACAAAGATATACGTTCA+AGG + chr4_2:52387098-52387117 None:intergenic 30.0%
TATATCTTTGTGATCAAGTG+TGG - chr4_2:52387104-52387123 Msa0606250:CDS 30.0%
!! GGTAAACCTTTCTACTTTTA+TGG - chr4_2:52387149-52387168 Msa0606250:CDS 30.0%
!! AAACCTTTCTACTTTTATGG+TGG - chr4_2:52387152-52387171 Msa0606250:CDS 30.0%
AGCAAATATGTTCTCATTCT+TGG - chr4_2:52387199-52387218 Msa0606250:CDS 30.0%
ATGTTCTCATTCTTGGAATT+TGG - chr4_2:52387206-52387225 Msa0606250:CDS 30.0%
TGTTCTCATTCTTGGAATTT+GGG - chr4_2:52387207-52387226 Msa0606250:CDS 30.0%
AGAAAGAGAAAGAAAACGAG+TGG + chr4_2:52381310-52381329 None:intergenic 35.0%
!!! GCTGATTTGGTCTTTTTCTT+CGG + chr4_2:52381611-52381630 None:intergenic 35.0%
AGAAGAAGAAGAAGAAGTGA+AGG - chr4_2:52381648-52381667 Msa0606250:three_prime_UTR 35.0%
GAGTATATGGATTCAGATGA+AGG - chr4_2:52381684-52381703 Msa0606250:three_prime_UTR 35.0%
GTATCAATGAGACTCATCAA+CGG + chr4_2:52381757-52381776 None:intergenic 35.0%
!! TCAATTGAACTTGCTGCTTT+AGG - chr4_2:52381799-52381818 Msa0606250:CDS 35.0%
!!! ATTTTGGTTTCTACATGAGC+AGG - chr4_2:52381879-52381898 Msa0606250:intron 35.0%
! ATCGATTGCTACTTCGAATA+TGG - chr4_2:52381950-52381969 Msa0606250:intron 35.0%
AGAACAAACCTGTTTAGCAA+GGG + chr4_2:52381985-52382004 None:intergenic 35.0%
AAGAACAAACCTGTTTAGCA+AGG + chr4_2:52381986-52382005 None:intergenic 35.0%
AGCTTGTATTCAAATGTGAG+TGG - chr4_2:52382059-52382078 Msa0606250:intron 35.0%
TTCGTATGGCTAATGATCTT+AGG - chr4_2:52382136-52382155 Msa0606250:intron 35.0%
! TGGCTAATGATCTTAGGTTT+TGG - chr4_2:52382142-52382161 Msa0606250:intron 35.0%
! GGCTAATGATCTTAGGTTTT+GGG - chr4_2:52382143-52382162 Msa0606250:intron 35.0%
!!! TAATGATCTTAGGTTTTGGG+TGG - chr4_2:52382146-52382165 Msa0606250:intron 35.0%
TGGTCTTTGTAGTTCATGAT+TGG - chr4_2:52382182-52382201 Msa0606250:intron 35.0%
AAAAAATGTGAGTGTGACCT+TGG - chr4_2:52382356-52382375 Msa0606250:intron 35.0%
TGTCATTGTTGGATGTATAC+GGG + chr4_2:52382494-52382513 None:intergenic 35.0%
! TCCAACAATGACAAAAGCAT+AGG - chr4_2:52382501-52382520 Msa0606250:intron 35.0%
! TCCTATGCTTTTGTCATTGT+TGG + chr4_2:52382505-52382524 None:intergenic 35.0%
!!! CTTTTTATTGGGTTAGCATG+TGG - chr4_2:52382739-52382758 Msa0606250:intron 35.0%
!!! TTGCCTTTTTCAGCTTTTAC+TGG - chr4_2:52382925-52382944 Msa0606250:intron 35.0%
GATCCAGTAAAAGCTGAAAA+AGG + chr4_2:52382931-52382950 None:intergenic 35.0%
!!! TTCTTTTGGTGTTAGATTCG+AGG - chr4_2:52383271-52383290 Msa0606250:intron 35.0%
!!! TCTTTTGGTGTTAGATTCGA+GGG - chr4_2:52383272-52383291 Msa0606250:intron 35.0%
! ATGACTTTTCTCAGATAGCA+AGG - chr4_2:52383522-52383541 Msa0606250:intron 35.0%
AAGCAATAGTTTACTCCTCA+GGG + chr4_2:52383742-52383761 None:intergenic 35.0%
AAAGCAATAGTTTACTCCTC+AGG + chr4_2:52383743-52383762 None:intergenic 35.0%
GTCTTGGTATGAAAGATTCT+TGG - chr4_2:52383843-52383862 Msa0606250:intron 35.0%
CTTGGTATGAAAGATTCTTG+GGG - chr4_2:52383845-52383864 Msa0606250:intron 35.0%
TATTTAAACTATGGGATCGC+TGG - chr4_2:52383932-52383951 Msa0606250:CDS 35.0%
ATTTAAACTATGGGATCGCT+GGG - chr4_2:52383933-52383952 Msa0606250:CDS 35.0%
!!! CGGATTTTAGAATCCGAATA+GGG + chr4_2:52384097-52384116 None:intergenic 35.0%
!!! TCGGATTTTAGAATCCGAAT+AGG + chr4_2:52384098-52384117 None:intergenic 35.0%
!! AGCAAAGCTCTAAATGACAA+GGG - chr4_2:52384457-52384476 Msa0606250:intron 35.0%
! AACTGAAAGTTCTGATGTGT+AGG - chr4_2:52384637-52384656 Msa0606250:intron 35.0%
AGAGTTACAAAACACAAGAC+AGG + chr4_2:52384743-52384762 None:intergenic 35.0%
!!! CTTATTTTAGGTCATGCTTC+AGG - chr4_2:52384828-52384847 Msa0606250:intron 35.0%
TACATGTTATGCGCAATATG+TGG - chr4_2:52384853-52384872 Msa0606250:intron 35.0%
CATAAATGATTGGGCAGTTT+GGG + chr4_2:52384890-52384909 None:intergenic 35.0%
CAACTCAGGCATAAATGATT+GGG + chr4_2:52384899-52384918 None:intergenic 35.0%
TCAACTCAGGCATAAATGAT+TGG + chr4_2:52384900-52384919 None:intergenic 35.0%
!! TTTATGCCTGAGTTGATGTA+TGG - chr4_2:52384904-52384923 Msa0606250:intron 35.0%
TTTACTCCATACATCAACTC+AGG + chr4_2:52384913-52384932 None:intergenic 35.0%
GTGAATTAGTAAGGAGAACA+TGG + chr4_2:52385104-52385123 None:intergenic 35.0%
TTATAGTATCTTGACAGGCT+CGG - chr4_2:52385175-52385194 Msa0606250:intron 35.0%
CTAAGGTCTCTTCTAACTAT+TGG - chr4_2:52385204-52385223 Msa0606250:intron 35.0%
CTAACTATTGGAGCTGTATT+CGG - chr4_2:52385216-52385235 Msa0606250:intron 35.0%
TAACTATTGGAGCTGTATTC+GGG - chr4_2:52385217-52385236 Msa0606250:intron 35.0%
GATCAGGTGTAAAAATGTAG+GGG + chr4_2:52385284-52385303 None:intergenic 35.0%
AAATTCAAGAACTAACCTCC+TGG + chr4_2:52385317-52385336 None:intergenic 35.0%
GAAAATTTCACTGTCTCCTT+TGG - chr4_2:52385352-52385371 Msa0606250:intron 35.0%
! GGAATTAAGGCTTCTTTTAG+TGG - chr4_2:52385373-52385392 Msa0606250:intron 35.0%
TTGTGATTATGCAGATGCAT+AGG - chr4_2:52385407-52385426 Msa0606250:intron 35.0%
!! TCCATTCTTTTTAGCACTAC+TGG - chr4_2:52385438-52385457 Msa0606250:intron 35.0%
ACCAGTAGTGCTAAAAAGAA+TGG + chr4_2:52385442-52385461 None:intergenic 35.0%
!! TGTTGGTAGTGTTATTCAGT+TGG - chr4_2:52385552-52385571 Msa0606250:intron 35.0%
GAACCTATGTGAAACAGATT+AGG + chr4_2:52385655-52385674 None:intergenic 35.0%
! TGCTATTGAGGTGCTAAAAA+AGG - chr4_2:52385722-52385741 Msa0606250:intron 35.0%
AGGAGTAAGCCTACTTATTT+CGG - chr4_2:52385742-52385761 Msa0606250:intron 35.0%
CCTACTTATTTCGGTAGAAT+GGG - chr4_2:52385751-52385770 Msa0606250:intron 35.0%
GCAGAGCTACTAAATAGTTA+AGG + chr4_2:52385794-52385813 None:intergenic 35.0%
!! TCTTTTAGGAGAACTGATCT+TGG + chr4_2:52385824-52385843 None:intergenic 35.0%
GAAGTCTTTAAACATCCTAG+AGG + chr4_2:52386052-52386071 None:intergenic 35.0%
ACATATACATAAGAAGCGGT+TGG + chr4_2:52386089-52386108 None:intergenic 35.0%
! TCTTTCTAGCAGTGCAATTA+GGG - chr4_2:52386164-52386183 Msa0606250:intron 35.0%
CCCATATACATAATGCCTTA+AGG - chr4_2:52386330-52386349 Msa0606250:intron 35.0%
!!! TAATGCCTTAAGGTTTTGGA+TGG - chr4_2:52386340-52386359 Msa0606250:intron 35.0%
AAAAGAAGCAACATGCAACA+TGG + chr4_2:52386470-52386489 None:intergenic 35.0%
TTGTGTATATTTGCTCATGC+AGG - chr4_2:52386492-52386511 Msa0606250:intron 35.0%
!! ACTGGATGCTTTTGTTTGAA+TGG - chr4_2:52386550-52386569 Msa0606250:intron 35.0%
! TTTCACTTGCTGGATTTCAA+TGG - chr4_2:52386708-52386727 Msa0606250:CDS 35.0%
! TTCACTTGCTGGATTTCAAT+GGG - chr4_2:52386709-52386728 Msa0606250:CDS 35.0%
CAGCACTTTCTATGAATTCT+AGG + chr4_2:52386746-52386765 None:intergenic 35.0%
TTTCGTGAACATATTCTGAC+AGG - chr4_2:52386771-52386790 Msa0606250:intron 35.0%
TTCGTGAACATATTCTGACA+GGG - chr4_2:52386772-52386791 Msa0606250:intron 35.0%
! TCCCAATGGCATTTTATACT+CGG - chr4_2:52386848-52386867 Msa0606250:CDS 35.0%
TCCGAGTATAAAATGCCATT+GGG + chr4_2:52386852-52386871 None:intergenic 35.0%
TTCCGAGTATAAAATGCCAT+TGG + chr4_2:52386853-52386872 None:intergenic 35.0%
ACAAAGATATACGTTCAAGG+CGG + chr4_2:52387095-52387114 None:intergenic 35.0%
AAGCCACCATAAAAGTAGAA+AGG + chr4_2:52387158-52387177 None:intergenic 35.0%
! GCTTTGCCATTTAGAAATAG+AGG - chr4_2:52387174-52387193 Msa0606250:CDS 35.0%
!! TGCTCTCCTCTATTTCTAAA+TGG + chr4_2:52387183-52387202 None:intergenic 35.0%
! CTTGGAATTTGGGTTCAAAA+TGG - chr4_2:52387217-52387236 Msa0606250:CDS 35.0%
! TTCAAAATGGCTTGTAAGGT+AGG - chr4_2:52387230-52387249 Msa0606250:exon 35.0%
! GAAAATCATCGATTGTGGAT+GGG + chr4_2:52387343-52387362 None:intergenic 35.0%
GGTAGTGTTCTTCCTTAGAA+GGG + chr4_2:52381485-52381504 None:intergenic 40.0%
! TGGTAGTGTTCTTCCTTAGA+AGG + chr4_2:52381486-52381505 None:intergenic 40.0%
!! GCATTGGTTTGTTGAATGGA+TGG + chr4_2:52381506-52381525 None:intergenic 40.0%
GCATTATTATATCCTCGAGC+AGG - chr4_2:52381524-52381543 Msa0606250:three_prime_UTR 40.0%
AGAAAAAGACCAAATCAGCG+AGG - chr4_2:52381612-52381631 Msa0606250:three_prime_UTR 40.0%
! TAGAAGAAACCTCGCTGATT+TGG + chr4_2:52381624-52381643 None:intergenic 40.0%
AGAAGAAGAAGTGAAGGAAC+TGG - chr4_2:52381654-52381673 Msa0606250:three_prime_UTR 40.0%
AACTGGTTGAGCAGAGTATA+TGG - chr4_2:52381671-52381690 Msa0606250:three_prime_UTR 40.0%
TTGTTTACTGGACCTGCTAT+TGG - chr4_2:52381715-52381734 Msa0606250:exon 40.0%
CATAACCAAAGACCAATAGC+AGG + chr4_2:52381730-52381749 None:intergenic 40.0%
!! GCTATTGGTCTTTGGTTATG+TGG - chr4_2:52381730-52381749 Msa0606250:CDS 40.0%
CTCATTGATACTGCTGTTGT+TGG - chr4_2:52381766-52381785 Msa0606250:CDS 40.0%
! TGGGTGGAAATGTAGTGTTT+TGG - chr4_2:52382162-52382181 Msa0606250:intron 40.0%
! CTTTCTTGTAATGGAGTCGT+TGG - chr4_2:52382297-52382316 Msa0606250:intron 40.0%
! ATGGAGTCGTTGGTTAGTAA+TGG - chr4_2:52382307-52382326 Msa0606250:intron 40.0%
TTCCATGGAGCCTAAAACAA+TGG - chr4_2:52382385-52382404 Msa0606250:intron 40.0%
! ATGGTCCACTCCATTGTTTT+AGG + chr4_2:52382398-52382417 None:intergenic 40.0%
TCGCTCTTAGTTCAATGTGA+TGG + chr4_2:52382417-52382436 None:intergenic 40.0%
AGTTCAAAGTCTCACTTGTG+TGG + chr4_2:52382440-52382459 None:intergenic 40.0%
GTTGTGTGTGCATAAAGTCA+TGG + chr4_2:52382635-52382654 None:intergenic 40.0%
TATGTTTGTGTAGGATAGGG+AGG - chr4_2:52382690-52382709 Msa0606250:intron 40.0%
!!! TCCAGTTGTGTCCCTTTTTT+TGG - chr4_2:52382833-52382852 Msa0606250:intron 40.0%
!!! CCAGTTGTGTCCCTTTTTTT+GGG - chr4_2:52382834-52382853 Msa0606250:intron 40.0%
AATTCATCAGTCATGGGGTA+GGG + chr4_2:52382896-52382915 None:intergenic 40.0%
TGGACATAAGTATTAGCTGC+GGG + chr4_2:52382973-52382992 None:intergenic 40.0%
CTGGACATAAGTATTAGCTG+CGG + chr4_2:52382974-52382993 None:intergenic 40.0%
! AGTGTTACTAAATCAAGCGG+AGG + chr4_2:52383247-52383266 None:intergenic 40.0%
AGAAAAGTCATTCATGGCGA+GGG + chr4_2:52383513-52383532 None:intergenic 40.0%
AGTTCACTAGGTATATGCTC+TGG + chr4_2:52383719-52383738 None:intergenic 40.0%
GCTGCTGCCAGTATTATAAA+TGG - chr4_2:52383884-52383903 Msa0606250:intron 40.0%
TTTAAACTATGGGATCGCTG+GGG - chr4_2:52383934-52383953 Msa0606250:CDS 40.0%
AGAGCACGTGAGAAATCAAT+AGG - chr4_2:52384189-52384208 Msa0606250:intron 40.0%
GAGCACGTGAGAAATCAATA+GGG - chr4_2:52384190-52384209 Msa0606250:intron 40.0%
ACGTGAGAAATCAATAGGGT+GGG - chr4_2:52384194-52384213 Msa0606250:intron 40.0%
ATCAATAGGGTGGGAAAAGA+AGG - chr4_2:52384203-52384222 Msa0606250:intron 40.0%
!!! ATCAACGTGCACTGCTTTTT+AGG - chr4_2:52384414-52384433 Msa0606250:intron 40.0%
!! GAGCAAAGCTCTAAATGACA+AGG - chr4_2:52384456-52384475 Msa0606250:intron 40.0%
! TTTTCCTTCACCATTCCTTC+AGG - chr4_2:52384490-52384509 Msa0606250:intron 40.0%
TTTCCTTCACCATTCCTTCA+GGG - chr4_2:52384491-52384510 Msa0606250:intron 40.0%
AAATTCCTTCCCTGAAGGAA+TGG + chr4_2:52384503-52384522 None:intergenic 40.0%
! TGAAAGTTCTGATGTGTAGG+TGG - chr4_2:52384640-52384659 Msa0606250:intron 40.0%
AATGTGCAGATAGACAGCAA+AGG + chr4_2:52384769-52384788 None:intergenic 40.0%
GCATAAATGATTGGGCAGTT+TGG + chr4_2:52384891-52384910 None:intergenic 40.0%
GTATGGAGTAAATCGGAGTT+TGG - chr4_2:52384921-52384940 Msa0606250:intron 40.0%
AGTAAATCGGAGTTTGGCAA+AGG - chr4_2:52384927-52384946 Msa0606250:intron 40.0%
!! CACTGTCTCCTTTGGAATTA+AGG - chr4_2:52385360-52385379 Msa0606250:intron 40.0%
GCCTACTTATTTCGGTAGAA+TGG - chr4_2:52385750-52385769 Msa0606250:intron 40.0%
CCCATTCTACCGAAATAAGT+AGG + chr4_2:52385754-52385773 None:intergenic 40.0%
! ACAGGTTTGCATCGATAACT+CGG - chr4_2:52385860-52385879 Msa0606250:CDS 40.0%
GTACTTTCATGATCCTACTC+AGG - chr4_2:52386107-52386126 Msa0606250:intron 40.0%
CAACGATCCACTACTATGAT+CGG + chr4_2:52386135-52386154 None:intergenic 40.0%
TGCACTGCTAGAAAGACTAT+GGG + chr4_2:52386160-52386179 None:intergenic 40.0%
TTGCACTGCTAGAAAGACTA+TGG + chr4_2:52386161-52386180 None:intergenic 40.0%
! GTCTTTCTAGCAGTGCAATT+AGG - chr4_2:52386163-52386182 Msa0606250:intron 40.0%
! ACACTTGAGGGGGATATTTT+TGG - chr4_2:52386237-52386256 Msa0606250:intron 40.0%
! CACTTGAGGGGGATATTTTT+GGG - chr4_2:52386238-52386257 Msa0606250:intron 40.0%
GATCTCCATCCAAAACCTTA+AGG + chr4_2:52386348-52386367 None:intergenic 40.0%
!!! TAAGGTTTTGGATGGAGATC+TGG - chr4_2:52386348-52386367 Msa0606250:intron 40.0%
TCTTGTTGGTCCATGACATT+GGG - chr4_2:52386381-52386400 Msa0606250:intron 40.0%
TATATTTGCTCATGCAGGCT+GGG - chr4_2:52386497-52386516 Msa0606250:intron 40.0%
!!! ACAACTTTTCCTTGGTTTGC+TGG - chr4_2:52386589-52386608 Msa0606250:intron 40.0%
GATCTGCATCGAGGTAAATT+GGG + chr4_2:52386654-52386673 None:intergenic 40.0%
GGATTTCAATGGGTAAGACT+CGG - chr4_2:52386719-52386738 Msa0606250:intron 40.0%
AAATGCCATTGGGAGATAGA+AGG + chr4_2:52386842-52386861 None:intergenic 40.0%
! TCAATTTTTGCAGCTCAGAC+TGG + chr4_2:52386884-52386903 None:intergenic 40.0%
!!! GGAGCTCCATTTTTAGTTCA+TGG - chr4_2:52386919-52386938 Msa0606250:CDS 40.0%
TGTCGATACAATTCAGTGCT+TGG - chr4_2:52387002-52387021 Msa0606250:CDS 40.0%
ACCAAATAACTATACCCCAG+TGG + chr4_2:52387132-52387151 None:intergenic 40.0%
! TGGGTTCAAAATGGCTTGTA+AGG - chr4_2:52387226-52387245 Msa0606250:CDS 40.0%
AAAACGAGTGGTCTGTAACG+TGG + chr4_2:52381298-52381317 None:intergenic 45.0%
TCTTCCTTAGAAGGGAAGGT+GGG + chr4_2:52381477-52381496 None:intergenic 45.0%
TTCTTCCTTAGAAGGGAAGG+TGG + chr4_2:52381478-52381497 None:intergenic 45.0%
GTGTTCTTCCTTAGAAGGGA+AGG + chr4_2:52381481-52381500 None:intergenic 45.0%
GATACTGCTGTTGTTGGTCA+AGG - chr4_2:52381772-52381791 Msa0606250:CDS 45.0%
! TGCTGTTGCTCCCTATGTTT+TGG - chr4_2:52382211-52382230 Msa0606250:intron 45.0%
! GCTGTTGCTCCCTATGTTTT+GGG - chr4_2:52382212-52382231 Msa0606250:intron 45.0%
! CTGTTGCTCCCTATGTTTTG+GGG - chr4_2:52382213-52382232 Msa0606250:intron 45.0%
ATCCCAGTCCCCAAAACATA+GGG + chr4_2:52382224-52382243 None:intergenic 45.0%
!! AAGTTAACTTGCCGAGAGAG+CGG - chr4_2:52382251-52382270 Msa0606250:intron 45.0%
! GAGTCGTTGGTTAGTAATGG+CGG - chr4_2:52382310-52382329 Msa0606250:intron 45.0%
TAGTAATGGCGGTGAGAGTA+CGG - chr4_2:52382321-52382340 Msa0606250:intron 45.0%
AAATGTGAGTGTGACCTTGG+TGG - chr4_2:52382359-52382378 Msa0606250:intron 45.0%
!!! CTCCATTGTTTTAGGCTCCA+TGG + chr4_2:52382390-52382409 None:intergenic 45.0%
TGGAGCCTAAAACAATGGAG+TGG - chr4_2:52382390-52382409 Msa0606250:intron 45.0%
GGATGTATACGGGTGTATAC+AGG + chr4_2:52382484-52382503 None:intergenic 45.0%
!! TATTGGGTTAGCATGTGGCT+CGG - chr4_2:52382744-52382763 Msa0606250:intron 45.0%
!!! CGGCGATGCTTTTTTTCACA+AGG - chr4_2:52382764-52382783 Msa0606250:intron 45.0%
CCCAAAAAAAGGGACACAAC+TGG + chr4_2:52382837-52382856 None:intergenic 45.0%
CAATTCATCAGTCATGGGGT+AGG + chr4_2:52382897-52382916 None:intergenic 45.0%
CGCAGCTAATACTTATGTCC+AGG - chr4_2:52382972-52382991 Msa0606250:intron 45.0%
!! TTGGTGTTAGATTCGAGGGT+TGG - chr4_2:52383276-52383295 Msa0606250:intron 45.0%
GCATGGCCGTGTTTACTTAT+TGG - chr4_2:52383298-52383317 Msa0606250:intron 45.0%
GATCGATTGCTCAAAGTGCA+AGG - chr4_2:52383320-52383339 Msa0606250:CDS 45.0%
GAAAAGTCATTCATGGCGAG+GGG + chr4_2:52383512-52383531 None:intergenic 45.0%
GAGAAAAGTCATTCATGGCG+AGG + chr4_2:52383514-52383533 None:intergenic 45.0%
TAGGCATTAAGAGCAGAGAG+AGG + chr4_2:52383635-52383654 None:intergenic 45.0%
TATACCTAGTGAACTCCCTG+AGG - chr4_2:52383724-52383743 Msa0606250:CDS 45.0%
CAAGACTGCGTGAAAGAATG+TGG + chr4_2:52383829-52383848 None:intergenic 45.0%
CACATTCTTTCACGCAGTCT+TGG - chr4_2:52383827-52383846 Msa0606250:intron 45.0%
TCGTAGGGTGGGAAAAGTAA+TGG + chr4_2:52384062-52384081 None:intergenic 45.0%
TATGGGGTGTATATGCCGTT+CGG - chr4_2:52384145-52384164 Msa0606250:CDS 45.0%
CACGTGAGAAATCAATAGGG+TGG - chr4_2:52384193-52384212 Msa0606250:intron 45.0%
GACAGAAATTCCTTCCCTGA+AGG + chr4_2:52384508-52384527 None:intergenic 45.0%
!! GAGCTCGTTTTTGTACTCAG+TGG - chr4_2:52385017-52385036 Msa0606250:intron 45.0%
!!! AGCTGTATTCGGGTTGCTTT+TGG - chr4_2:52385227-52385246 Msa0606250:intron 45.0%
!!! GCTGTATTCGGGTTGCTTTT+GGG - chr4_2:52385228-52385247 Msa0606250:intron 45.0%
!!! CTGTATTCGGGTTGCTTTTG+GGG - chr4_2:52385229-52385248 Msa0606250:intron 45.0%
ACCTGATCAAATGGTCATCC+AGG - chr4_2:52385296-52385315 Msa0606250:CDS 45.0%
TCCTGGATGACCATTTGATC+AGG + chr4_2:52385300-52385319 None:intergenic 45.0%
TGATCAAATGGTCATCCAGG+AGG - chr4_2:52385299-52385318 Msa0606250:CDS 45.0%
CTGGTATGCTCATGTTCGAT+TGG - chr4_2:52385496-52385515 Msa0606250:intron 45.0%
! GTTTGCATCGATAACTCGGA+GGG - chr4_2:52385864-52385883 Msa0606250:CDS 45.0%
GATGTGAGACTCACACTTGA+GGG - chr4_2:52386225-52386244 Msa0606250:intron 45.0%
ATGTGAGACTCACACTTGAG+GGG - chr4_2:52386226-52386245 Msa0606250:intron 45.0%
TCATGGACCAACAAGAGATC+AGG + chr4_2:52386377-52386396 None:intergenic 45.0%
CTCTTGTTGGTCCATGACAT+TGG - chr4_2:52386380-52386399 Msa0606250:intron 45.0%
CAAAAACAGGCCCAATGTCA+TGG + chr4_2:52386394-52386413 None:intergenic 45.0%
GTATATTTGCTCATGCAGGC+TGG - chr4_2:52386496-52386515 Msa0606250:intron 45.0%
CTATGTACACCAGCAAACCA+AGG + chr4_2:52386601-52386620 None:intergenic 45.0%
GGATCTGCATCGAGGTAAAT+TGG + chr4_2:52386655-52386674 None:intergenic 45.0%
CAGATCCTATCCAGCAGATA+TGG - chr4_2:52386668-52386687 Msa0606250:CDS 45.0%
GCAAACCATATCTGCTGGAT+AGG + chr4_2:52386676-52386695 None:intergenic 45.0%
! TCCAGCAGATATGGTTTGCA+AGG - chr4_2:52386677-52386696 Msa0606250:CDS 45.0%
! GATATGGTTTGCAAGGCTGT+TGG - chr4_2:52386684-52386703 Msa0606250:CDS 45.0%
ATTCAGTGCTTGGAAACTGC+AGG - chr4_2:52387012-52387031 Msa0606250:CDS 45.0%
GAGTTGTATCGGAAACTGTG+CGG - chr4_2:52387039-52387058 Msa0606250:CDS 45.0%
AGTTGTATCGGAAACTGTGC+GGG - chr4_2:52387040-52387059 Msa0606250:CDS 45.0%
AAGATATACGTTCAAGGCGG+TGG + chr4_2:52387092-52387111 None:intergenic 45.0%
GCCACTGGGGTATAGTTATT+TGG - chr4_2:52387128-52387147 Msa0606250:CDS 45.0%
! TGGCTTGTAAGGTAGGAATG+TGG - chr4_2:52387237-52387256 Msa0606250:exon 45.0%
! TCATCGATTGTGGATGGGAA+TGG + chr4_2:52387338-52387357 None:intergenic 45.0%
!! ATTTAATAATATTATACTAT+TGG - chr4_2:52383775-52383794 Msa0606250:CDS 5.0%
!! TTTAATAATATTATACTATT+GGG - chr4_2:52383776-52383795 Msa0606250:CDS 5.0%
!! CTGGACCTGCTATTGGTCTT+TGG - chr4_2:52381722-52381741 Msa0606250:CDS 50.0%
TGCTACTGCCCTTGCTAAAC+AGG - chr4_2:52381974-52381993 Msa0606250:intron 50.0%
!!! CTCCCTATGTTTTGGGGACT+GGG - chr4_2:52382219-52382238 Msa0606250:intron 50.0%
GATCCCAGTCCCCAAAACAT+AGG + chr4_2:52382225-52382244 None:intergenic 50.0%
GCTCTCTCGGCAAGTTAACT+TGG + chr4_2:52382252-52382271 None:intergenic 50.0%
!! AGTTAACTTGCCGAGAGAGC+GGG - chr4_2:52382252-52382271 Msa0606250:intron 50.0%
AAGATCTACTCCCGCTCTCT+CGG + chr4_2:52382265-52382284 None:intergenic 50.0%
! GTTAGATTCGAGGGTTGGCA+TGG - chr4_2:52383281-52383300 Msa0606250:intron 50.0%
TACTCCTCAGGGAGTTCACT+AGG + chr4_2:52383731-52383750 None:intergenic 50.0%
AGATTCTTGGGGACCCTTGA+AGG - chr4_2:52383856-52383875 Msa0606250:intron 50.0%
TTCCCACCCTACGAGTTTCT+CGG - chr4_2:52384068-52384087 Msa0606250:CDS 50.0%
AGTTTCTCGGGTGCCCTATT+CGG - chr4_2:52384081-52384100 Msa0606250:CDS 50.0%
CTTCCCTGAAGGAATGGTGA+AGG + chr4_2:52384497-52384516 None:intergenic 50.0%
CTTCACCATTCCTTCAGGGA+AGG - chr4_2:52384495-52384514 Msa0606250:intron 50.0%
ATACCAGCAATGTTCCCTCC+AGG + chr4_2:52385483-52385502 None:intergenic 50.0%
! GGTTTGCATCGATAACTCGG+AGG - chr4_2:52385863-52385882 Msa0606250:CDS 50.0%
! GCGGTTGGTACTTCCATGTA+AGG + chr4_2:52386074-52386093 None:intergenic 50.0%
ACTATGATCGGAGCCTGAGT+AGG + chr4_2:52386123-52386142 None:intergenic 50.0%
TCAGGCTCCGATCATAGTAG+TGG - chr4_2:52386125-52386144 Msa0606250:intron 50.0%
GGATGTGAGACTCACACTTG+AGG - chr4_2:52386224-52386243 Msa0606250:intron 50.0%
TGTGAGACTCACACTTGAGG+GGG - chr4_2:52386227-52386246 Msa0606250:intron 50.0%
CTGGTGTCCTGATCTCTTGT+TGG - chr4_2:52386367-52386386 Msa0606250:intron 50.0%
GGAGCAACGAGAGCAAAAAC+AGG + chr4_2:52386407-52386426 None:intergenic 50.0%
TCATGAATGTTGGGGAGTCC+GGG + chr4_2:52386430-52386449 None:intergenic 50.0%
GTCATGAATGTTGGGGAGTC+CGG + chr4_2:52386431-52386450 None:intergenic 50.0%
GCCTTGCAAACCATATCTGC+TGG + chr4_2:52386681-52386700 None:intergenic 50.0%
!!! GGCTGTTGGTTTTCACTTGC+TGG - chr4_2:52386698-52386717 Msa0606250:CDS 50.0%
!! CTGCAGGTGCTGAGTTGTAT+CGG - chr4_2:52387028-52387047 Msa0606250:CDS 50.0%
GTTGTATCGGAAACTGTGCG+GGG - chr4_2:52387041-52387060 Msa0606250:CDS 50.0%
!! TGATCAAGTGTGGTGCCACT+GGG - chr4_2:52387114-52387133 Msa0606250:CDS 50.0%
GTCTGTAACGTGGAATCCGC+GGG + chr4_2:52381288-52381307 None:intergenic 55.0%
GGTCTGTAACGTGGAATCCG+CGG + chr4_2:52381289-52381308 None:intergenic 55.0%
GAAGGTGGGAGGAAACGAAG+AGG + chr4_2:52381463-52381482 None:intergenic 55.0%
TCCTCCCACCTTCCCTTCTA+AGG - chr4_2:52381470-52381489 Msa0606250:three_prime_UTR 55.0%
TCCTTAGAAGGGAAGGTGGG+AGG + chr4_2:52381474-52381493 None:intergenic 55.0%
!!! GCTCCCTATGTTTTGGGGAC+TGG - chr4_2:52382218-52382237 Msa0606250:intron 55.0%
! TGACCTTGGTGGCACTTCCA+TGG - chr4_2:52382370-52382389 Msa0606250:intron 55.0%
TTAGGCGCAACAACGCTAGC+AGG - chr4_2:52382790-52382809 Msa0606250:intron 55.0%
TTGGGGACCCTTGAAGGCTT+TGG - chr4_2:52383862-52383881 Msa0606250:intron 55.0%
GCAGCAGCCAAAGCCTTCAA+GGG + chr4_2:52383872-52383891 None:intergenic 55.0%
TCCCACCCTACGAGTTTCTC+GGG - chr4_2:52384069-52384088 Msa0606250:CDS 55.0%
ACCCGAGAAACTCGTAGGGT+GGG + chr4_2:52384073-52384092 None:intergenic 55.0%
CTCACGTGCTCTGTGCAGTT+TGG + chr4_2:52384181-52384200 None:intergenic 55.0%
GATTGGGCAGTTTGGGAGAG+AGG + chr4_2:52384883-52384902 None:intergenic 55.0%
CTGGTCACACCTGCAACAGT+CGG - chr4_2:52385457-52385476 Msa0606250:intron 55.0%
! TTTTGCTCTCGTTGCTCCCC+CGG - chr4_2:52386409-52386428 Msa0606250:intron 55.0%
ATGAATGTTGGGGAGTCCGG+GGG + chr4_2:52386428-52386447 None:intergenic 55.0%
CATGAATGTTGGGGAGTCCG+GGG + chr4_2:52386429-52386448 None:intergenic 55.0%
ATTTGCTCATGCAGGCTGGG+CGG - chr4_2:52386500-52386519 Msa0606250:intron 55.0%
GCTGGATAGGATCTGCATCG+AGG + chr4_2:52386663-52386682 None:intergenic 55.0%
! GGGAGATAGAAGGCGCAGAA+GGG + chr4_2:52386832-52386851 None:intergenic 55.0%
! TGGGAGATAGAAGGCGCAGA+AGG + chr4_2:52386833-52386852 None:intergenic 55.0%
CTGCGCCTTCTATCTCCCAA+TGG - chr4_2:52386834-52386853 Msa0606250:CDS 55.0%
TCGGAAACTGTGCGGGGAAA+TGG - chr4_2:52387047-52387066 Msa0606250:CDS 55.0%
CGGAAACTGTGCGGGGAAAT+GGG - chr4_2:52387048-52387067 Msa0606250:CDS 55.0%
GGAAACTGTGCGGGGAAATG+GGG - chr4_2:52387049-52387068 Msa0606250:CDS 55.0%
GAAACTGTGCGGGGAAATGG+GGG - chr4_2:52387050-52387069 Msa0606250:CDS 55.0%
!! GTGATCAAGTGTGGTGCCAC+TGG - chr4_2:52387113-52387132 Msa0606250:CDS 55.0%
!! GATCAAGTGTGGTGCCACTG+GGG - chr4_2:52387115-52387134 Msa0606250:CDS 55.0%
! GGAGGAAACGAAGAGGTGCG+TGG + chr4_2:52381456-52381475 None:intergenic 60.0%
GAAGCGACTGTTCCTGCTCG+AGG + chr4_2:52381539-52381558 None:intergenic 60.0%
!! GCTCCATGGAAGTGCCACCA+AGG + chr4_2:52382376-52382395 None:intergenic 60.0%
GGCAGCAGCCAAAGCCTTCA+AGG + chr4_2:52383873-52383892 None:intergenic 60.0%
! TGGGGCTGCATGGGCTACAT+TGG - chr4_2:52383952-52383971 Msa0606250:CDS 60.0%
CACCCGAGAAACTCGTAGGG+TGG + chr4_2:52384074-52384093 None:intergenic 60.0%
GGGCACCCGAGAAACTCGTA+GGG + chr4_2:52384077-52384096 None:intergenic 60.0%
! AGGGCACCCGAGAAACTCGT+AGG + chr4_2:52384078-52384097 None:intergenic 60.0%
! GACAGGCTCGGTCGCTTCTA+AGG - chr4_2:52385187-52385206 Msa0606250:intron 60.0%
TTTGCTCATGCAGGCTGGGC+GGG - chr4_2:52386501-52386520 Msa0606250:intron 60.0%
TGCGGGGAAATGGGGGATGT+GGG - chr4_2:52387057-52387076 Msa0606250:CDS 60.0%
ATGGGATCGCTGGGGCTGCA+TGG - chr4_2:52383942-52383961 Msa0606250:CDS 65.0%
TGGGATCGCTGGGGCTGCAT+GGG - chr4_2:52383943-52383962 Msa0606250:CDS 65.0%
CACACCTGCAACAGTCGGCC+TGG - chr4_2:52385462-52385481 Msa0606250:intron 65.0%
ACCTGCAACAGTCGGCCTGG+AGG - chr4_2:52385465-52385484 Msa0606250:intron 65.0%
CCTGCAACAGTCGGCCTGGA+GGG - chr4_2:52385466-52385485 Msa0606250:intron 65.0%
CGGCCTGGAGGGAACATTGC+TGG - chr4_2:52385477-52385496 Msa0606250:intron 65.0%
GTGCGGGGAAATGGGGGATG+TGG - chr4_2:52387056-52387075 Msa0606250:CDS 65.0%
CCCTCCAGGCCGACTGTTGC+AGG + chr4_2:52385469-52385488 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 52381274 52387362 52381274 ID=Msa0606250;Name=Msa0606250
chr4_2 mRNA 52381274 52387362 52381274 ID=Msa0606250-mRNA-1;Parent=Msa0606250;Name=Msa0606250-mRNA-1;_AED=0.32;_eAED=0.32;_QI=117|0.91|1|1|1|1|13|448|523
chr4_2 exon 52381274 52381823 52381274 ID=Msa0606250-mRNA-1:exon:12878;Parent=Msa0606250-mRNA-1
chr4_2 exon 52381906 52381965 52381906 ID=Msa0606250-mRNA-1:exon:12877;Parent=Msa0606250-mRNA-1
chr4_2 exon 52383138 52383215 52383138 ID=Msa0606250-mRNA-1:exon:12876;Parent=Msa0606250-mRNA-1
chr4_2 exon 52383316 52383444 52383316 ID=Msa0606250-mRNA-1:exon:12875;Parent=Msa0606250-mRNA-1
chr4_2 exon 52383688 52383798 52383688 ID=Msa0606250-mRNA-1:exon:12874;Parent=Msa0606250-mRNA-1
chr4_2 exon 52383909 52383977 52383909 ID=Msa0606250-mRNA-1:exon:12873;Parent=Msa0606250-mRNA-1
chr4_2 exon 52384063 52384200 52384063 ID=Msa0606250-mRNA-1:exon:12872;Parent=Msa0606250-mRNA-1
chr4_2 exon 52384654 52384792 52384654 ID=Msa0606250-mRNA-1:exon:12871;Parent=Msa0606250-mRNA-1
chr4_2 exon 52385295 52385350 52385295 ID=Msa0606250-mRNA-1:exon:12870;Parent=Msa0606250-mRNA-1
chr4_2 exon 52385643 52385698 52385643 ID=Msa0606250-mRNA-1:exon:12869;Parent=Msa0606250-mRNA-1
chr4_2 exon 52385825 52385933 52385825 ID=Msa0606250-mRNA-1:exon:12868;Parent=Msa0606250-mRNA-1
chr4_2 exon 52386641 52386735 52386641 ID=Msa0606250-mRNA-1:exon:12867;Parent=Msa0606250-mRNA-1
chr4_2 exon 52386816 52387362 52386816 ID=Msa0606250-mRNA-1:exon:12866;Parent=Msa0606250-mRNA-1
chr4_2 five_prime_UTR 52387246 52387362 52387246 ID=Msa0606250-mRNA-1:five_prime_utr;Parent=Msa0606250-mRNA-1
chr4_2 CDS 52386816 52387245 52386816 ID=Msa0606250-mRNA-1:cds;Parent=Msa0606250-mRNA-1
chr4_2 CDS 52386641 52386735 52386641 ID=Msa0606250-mRNA-1:cds;Parent=Msa0606250-mRNA-1
chr4_2 CDS 52385825 52385933 52385825 ID=Msa0606250-mRNA-1:cds;Parent=Msa0606250-mRNA-1
chr4_2 CDS 52385643 52385698 52385643 ID=Msa0606250-mRNA-1:cds;Parent=Msa0606250-mRNA-1
chr4_2 CDS 52385295 52385350 52385295 ID=Msa0606250-mRNA-1:cds;Parent=Msa0606250-mRNA-1
chr4_2 CDS 52384654 52384792 52384654 ID=Msa0606250-mRNA-1:cds;Parent=Msa0606250-mRNA-1
chr4_2 CDS 52384063 52384200 52384063 ID=Msa0606250-mRNA-1:cds;Parent=Msa0606250-mRNA-1
chr4_2 CDS 52383909 52383977 52383909 ID=Msa0606250-mRNA-1:cds;Parent=Msa0606250-mRNA-1
chr4_2 CDS 52383688 52383798 52383688 ID=Msa0606250-mRNA-1:cds;Parent=Msa0606250-mRNA-1
chr4_2 CDS 52383316 52383444 52383316 ID=Msa0606250-mRNA-1:cds;Parent=Msa0606250-mRNA-1
chr4_2 CDS 52383138 52383215 52383138 ID=Msa0606250-mRNA-1:cds;Parent=Msa0606250-mRNA-1
chr4_2 CDS 52381906 52381965 52381906 ID=Msa0606250-mRNA-1:cds;Parent=Msa0606250-mRNA-1
chr4_2 CDS 52381722 52381823 52381722 ID=Msa0606250-mRNA-1:cds;Parent=Msa0606250-mRNA-1
chr4_2 three_prime_UTR 52381274 52381721 52381274 ID=Msa0606250-mRNA-1:three_prime_utr;Parent=Msa0606250-mRNA-1
Gene Sequence

>Msa0606250

ATGGCACAAAAACTTTCACTACACTTCAATCACACTCTTCACACTTCACTACACTTGAATCGCCACGCACCTCTTCGTTTCCTCCCACCTTCCCTTCTAAGGAAGAACACTACCATCCATTCAACAAACCAATGCATTATTATATCCTCGAGCAGGAACAGTCGCTTCAAGTTTCTAACAGCTTGCTCAGTTCAAAATTACGATGCTATAGATGAAGCCGAAGAAAAAGACCAAATCAGCGAGGTTTCTTCTAAAGAAGAAGAAGAAGAAGAAGTGAAGGAACTGGTTGAGCAGAGTATATGGATTCAGATGAAGGAAATTGTATTGTTTACTGGACCTGCTATTGGTCTTTGGTTATGTGGACCGTTGATGAGTCTCATTGATACTGCTGTTGTTGGTCAAGGAAGTTCAATTGAACTTGCTGCTTTAGGTCCTGCTACTGTTTTTTGTGATTATTTGGGCTACTCTTTTATGTTTCTATCGATTGCTACTTCGAATATGGTTGCTACTGCCCTTGCTAAACAGGATAGGGAGGAAGTGCAGCATCACATATCTGTCTTGCTTTTTATTGGGTTAGCATGTGGCTCGGCGATGCTTTTTTTCACAAGGTTATTAGGCGCAACAACGCTAGCAGCTTTTACTGGATCAAAGAATGTACATCTAGTACCCGCAGCTAATACTTATGTCCAGATTCGAGGGTTGGCATGGCCGTGTTTACTTATTGGATCGATTGCTCAAAGTGCAAGTCTTGGTATGAAAGATTCTTGGGGACCCTTGAAGGCTTTGGCTGCTGCCAGTATTATAAATGGAATTGGTGATATAGTTCTGTGCAGATATTTAAACTATGGGATCGCTGGGGCTGCATGGGCTACATTGGCATCCCAAGTCGTTGCTGCGTATATGATGAGCAAAGCTCTAAATGACAAGGGATACAATGCATTTTCCTTCACCATTCCTTCAGGGAAGGAATTTCTGTCAATATTTAGTCTTGCTGCTCCTGTATTTGTGACATTGATGTTAAAGGTGGCTTTCTACTCTCTAATTATATATTTTGCTACATCAATGGGTACAAATAAAATAGCTGCTCATCAAGTCATGCTTCAGGTCTACATGTTATGCGCAATATGTGGTGAACCTCTCTCCCAAACTGCCCAATCATTTATGCCTGAGTTGATGTATGGAGTAAATCGGAGTTTGGCAAAGGCTCGGTCGCTTCTAAGGTCTCTTCTAACTATTGGAGCTGTATTCGGGTTGCTTTTGGGGATTGTTGTAACATCTGTTACTTGGTTATTCCCCTACATTTTTACACCTGATCAAATGGTCATCCAGGAGATGCATAGGATTCTGATTCCATTCTTTTTAGCACTACTGGTCACACCTGCAACAGTCGGCCTGGAGGGAACATTGCTGATCCTATCCAGCAGATATGGTTTGCAAGGCTGTTGGTTTTCACTTGCTGGATTTCAATGGGTTCGGTTTTCATCGGCCCTTCTGCGCCTTCTATCTCCCAATGGCATTTTATACTCGGAAGATATAAGCCAGTCTGAGCTGCAAAAATTGAAGACTGCATAA

Protein sequence

>Msa0606250

MAQKLSLHFNHTLHTSLHLNRHAPLRFLPPSLLRKNTTIHSTNQCIIISSSRNSRFKFLTACSVQNYDAIDEAEEKDQISEVSSKEEEEEEVKELVEQSIWIQMKEIVLFTGPAIGLWLCGPLMSLIDTAVVGQGSSIELAALGPATVFCDYLGYSFMFLSIATSNMVATALAKQDREEVQHHISVLLFIGLACGSAMLFFTRLLGATTLAAFTGSKNVHLVPAANTYVQIRGLAWPCLLIGSIAQSASLGMKDSWGPLKALAAASIINGIGDIVLCRYLNYGIAGAAWATLASQVVAAYMMSKALNDKGYNAFSFTIPSGKEFLSIFSLAAPVFVTLMLKVAFYSLIIYFATSMGTNKIAAHQVMLQVYMLCAICGEPLSQTAQSFMPELMYGVNRSLAKARSLLRSLLTIGAVFGLLLGIVVTSVTWLFPYIFTPDQMVIQEMHRILIPFFLALLVTPATVGLEGTLLILSSRYGLQGCWFSLAGFQWVRFSSALLRLLSPNGILYSEDISQSELQKLKTA*