Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070803.t1 | XP_013455682.1 | 95.3 | 381 | 18 | 0 | 4 | 384 | 1 | 381 | 3.40E-218 | 767.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070803.t1 | Q339N5 | 54.1 | 370 | 163 | 5 | 12 | 376 | 11 | 378 | 1.1e-111 | 404.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070803.t1 | A0A072UKU0 | 95.3 | 381 | 18 | 0 | 4 | 384 | 1 | 381 | 2.4e-218 | 767.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049173 | MS.gene070803 | 0.806306 | 8.77E-50 | -1.69E-46 |
MS.gene049217 | MS.gene070803 | 0.820225 | 7.68E-53 | -1.69E-46 |
MS.gene049222 | MS.gene070803 | 0.843366 | 1.46E-58 | -1.69E-46 |
MS.gene049232 | MS.gene070803 | 0.828246 | 1.00E-54 | -1.69E-46 |
MS.gene049285 | MS.gene070803 | 0.832332 | 1.00E-55 | -1.69E-46 |
MS.gene049320 | MS.gene070803 | 0.826029 | 3.39E-54 | -1.69E-46 |
MS.gene049356 | MS.gene070803 | 0.842645 | 2.28E-58 | -1.69E-46 |
MS.gene049369 | MS.gene070803 | 0.88276 | 7.95E-71 | -1.69E-46 |
MS.gene049396 | MS.gene070803 | 0.853441 | 2.38E-61 | -1.69E-46 |
MS.gene049609 | MS.gene070803 | 0.832119 | 1.13E-55 | -1.69E-46 |
MS.gene049633 | MS.gene070803 | 0.834864 | 2.34E-56 | -1.69E-46 |
MS.gene049805 | MS.gene070803 | 0.80229 | 6.02E-49 | -1.69E-46 |
MS.gene049907 | MS.gene070803 | 0.807752 | 4.34E-50 | -1.69E-46 |
MS.gene050163 | MS.gene070803 | 0.805276 | 1.44E-49 | -1.69E-46 |
MS.gene050165 | MS.gene070803 | 0.802688 | 4.98E-49 | -1.69E-46 |
MS.gene050170 | MS.gene070803 | 0.820208 | 7.74E-53 | -1.69E-46 |
MS.gene050323 | MS.gene070803 | 0.820379 | 7.08E-53 | -1.69E-46 |
MS.gene050496 | MS.gene070803 | 0.803068 | 4.16E-49 | -1.69E-46 |
MS.gene050499 | MS.gene070803 | 0.835935 | 1.26E-56 | -1.69E-46 |
MS.gene050502 | MS.gene070803 | 0.804576 | 2.02E-49 | -1.69E-46 |
MS.gene050504 | MS.gene070803 | 0.816386 | 5.68E-52 | -1.69E-46 |
MS.gene050518 | MS.gene070803 | 0.815612 | 8.45E-52 | -1.69E-46 |
MS.gene050520 | MS.gene070803 | 0.835084 | 2.06E-56 | -1.69E-46 |
MS.gene050612 | MS.gene070803 | 0.807319 | 5.36E-50 | -1.69E-46 |
MS.gene050675 | MS.gene070803 | 0.829823 | 4.15E-55 | -1.69E-46 |
MS.gene050686 | MS.gene070803 | 0.817872 | 2.63E-52 | -1.69E-46 |
MS.gene050747 | MS.gene070803 | 0.828591 | 8.26E-55 | -1.69E-46 |
MS.gene050772 | MS.gene070803 | 0.862351 | 5.39E-64 | -1.69E-46 |
MS.gene05080 | MS.gene070803 | 0.843378 | 1.45E-58 | -1.69E-46 |
MS.gene050868 | MS.gene070803 | 0.853354 | 2.53E-61 | -1.69E-46 |
MS.gene050871 | MS.gene070803 | 0.855399 | 6.48E-62 | -1.69E-46 |
MS.gene050904 | MS.gene070803 | 0.809506 | 1.83E-50 | -1.69E-46 |
MS.gene050950 | MS.gene070803 | 0.828561 | 8.40E-55 | -1.69E-46 |
MS.gene050986 | MS.gene070803 | 0.801639 | 8.19E-49 | -1.69E-46 |
MS.gene05105 | MS.gene070803 | 0.821469 | 3.97E-53 | -1.69E-46 |
MS.gene051268 | MS.gene070803 | 0.835438 | 1.68E-56 | -1.69E-46 |
MS.gene051438 | MS.gene070803 | 0.80395 | 2.73E-49 | -1.69E-46 |
MS.gene051509 | MS.gene070803 | 0.830533 | 2.78E-55 | -1.69E-46 |
MS.gene051666 | MS.gene070803 | 0.811631 | 6.36E-51 | -1.69E-46 |
MS.gene051734 | MS.gene070803 | 0.820218 | 7.70E-53 | -1.69E-46 |
MS.gene051810 | MS.gene070803 | 0.80967 | 1.69E-50 | -1.69E-46 |
MS.gene051838 | MS.gene070803 | 0.820363 | 7.14E-53 | -1.69E-46 |
MS.gene051858 | MS.gene070803 | 0.831768 | 1.38E-55 | -1.69E-46 |
MS.gene051874 | MS.gene070803 | 0.864936 | 8.49E-65 | -1.69E-46 |
MS.gene051941 | MS.gene070803 | 0.825308 | 5.03E-54 | -1.69E-46 |
MS.gene052164 | MS.gene070803 | 0.865269 | 6.68E-65 | -1.69E-46 |
MS.gene052346 | MS.gene070803 | 0.807133 | 5.87E-50 | -1.69E-46 |
MS.gene052414 | MS.gene070803 | 0.816573 | 5.16E-52 | -1.69E-46 |
MS.gene052421 | MS.gene070803 | 0.811087 | 8.34E-51 | -1.69E-46 |
MS.gene052615 | MS.gene070803 | 0.821685 | 3.54E-53 | -1.69E-46 |
MS.gene052822 | MS.gene070803 | 0.812333 | 4.47E-51 | -1.69E-46 |
MS.gene052870 | MS.gene070803 | 0.837668 | 4.54E-57 | -1.69E-46 |
MS.gene052872 | MS.gene070803 | 0.84533 | 4.34E-59 | -1.69E-46 |
MS.gene052916 | MS.gene070803 | 0.800165 | 1.64E-48 | -1.69E-46 |
MS.gene052966 | MS.gene070803 | 0.854052 | 1.59E-61 | -1.69E-46 |
MS.gene053009 | MS.gene070803 | 0.821063 | 4.93E-53 | -1.69E-46 |
MS.gene053203 | MS.gene070803 | 0.814593 | 1.42E-51 | -1.69E-46 |
MS.gene053207 | MS.gene070803 | 0.824237 | 9.00E-54 | -1.69E-46 |
MS.gene053213 | MS.gene070803 | 0.81997 | 8.78E-53 | -1.69E-46 |
MS.gene053286 | MS.gene070803 | 0.817698 | 2.88E-52 | -1.69E-46 |
MS.gene053449 | MS.gene070803 | 0.819891 | 9.15E-53 | -1.69E-46 |
MS.gene053574 | MS.gene070803 | 0.862947 | 3.53E-64 | -1.69E-46 |
MS.gene053626 | MS.gene070803 | 0.825476 | 4.59E-54 | -1.69E-46 |
MS.gene053632 | MS.gene070803 | 0.82475 | 6.82E-54 | -1.69E-46 |
MS.gene053758 | MS.gene070803 | 0.81025 | 1.27E-50 | -1.69E-46 |
MS.gene053813 | MS.gene070803 | 0.801953 | 7.06E-49 | -1.69E-46 |
MS.gene053824 | MS.gene070803 | 0.858778 | 6.52E-63 | -1.69E-46 |
MS.gene053912 | MS.gene070803 | 0.852575 | 4.22E-61 | -1.69E-46 |
MS.gene053916 | MS.gene070803 | 0.875348 | 3.31E-68 | -1.69E-46 |
MS.gene054003 | MS.gene070803 | 0.804745 | 1.86E-49 | -1.69E-46 |
MS.gene054408 | MS.gene070803 | 0.811575 | 6.54E-51 | -1.69E-46 |
MS.gene054595 | MS.gene070803 | 0.804043 | 2.61E-49 | -1.69E-46 |
MS.gene054600 | MS.gene070803 | 0.829139 | 6.08E-55 | -1.69E-46 |
MS.gene054642 | MS.gene070803 | 0.825852 | 3.74E-54 | -1.69E-46 |
MS.gene054927 | MS.gene070803 | 0.806116 | 9.62E-50 | -1.69E-46 |
MS.gene05494 | MS.gene070803 | 0.887542 | 1.30E-72 | -1.69E-46 |
MS.gene054954 | MS.gene070803 | 0.815073 | 1.11E-51 | -1.69E-46 |
MS.gene05505 | MS.gene070803 | 0.859558 | 3.81E-63 | -1.69E-46 |
MS.gene055224 | MS.gene070803 | 0.84243 | 2.60E-58 | -1.69E-46 |
MS.gene055362 | MS.gene070803 | 0.811359 | 7.28E-51 | -1.69E-46 |
MS.gene055502 | MS.gene070803 | 0.813599 | 2.36E-51 | -1.69E-46 |
MS.gene055577 | MS.gene070803 | 0.846741 | 1.80E-59 | -1.69E-46 |
MS.gene055722 | MS.gene070803 | 0.859235 | 4.76E-63 | -1.69E-46 |
MS.gene055741 | MS.gene070803 | 0.823376 | 1.43E-53 | -1.69E-46 |
MS.gene055744 | MS.gene070803 | 0.812956 | 3.27E-51 | -1.69E-46 |
MS.gene055748 | MS.gene070803 | 0.800817 | 1.21E-48 | -1.69E-46 |
MS.gene055750 | MS.gene070803 | 0.824324 | 8.58E-54 | -1.69E-46 |
MS.gene055751 | MS.gene070803 | 0.810111 | 1.36E-50 | -1.69E-46 |
MS.gene05589 | MS.gene070803 | 0.828973 | 6.67E-55 | -1.69E-46 |
MS.gene055909 | MS.gene070803 | 0.855398 | 6.48E-62 | -1.69E-46 |
MS.gene055911 | MS.gene070803 | 0.847761 | 9.42E-60 | -1.69E-46 |
MS.gene055941 | MS.gene070803 | 0.836726 | 7.90E-57 | -1.69E-46 |
MS.gene056166 | MS.gene070803 | 0.825496 | 4.54E-54 | -1.69E-46 |
MS.gene056283 | MS.gene070803 | 0.823321 | 1.48E-53 | -1.69E-46 |
MS.gene056387 | MS.gene070803 | 0.836436 | 9.37E-57 | -1.69E-46 |
MS.gene056409 | MS.gene070803 | 0.805023 | 1.63E-49 | -1.69E-46 |
MS.gene056422 | MS.gene070803 | 0.820345 | 7.20E-53 | -1.69E-46 |
MS.gene056448 | MS.gene070803 | 0.819457 | 1.15E-52 | -1.69E-46 |
MS.gene056449 | MS.gene070803 | 0.856135 | 3.95E-62 | -1.69E-46 |
MS.gene056487 | MS.gene070803 | 0.820269 | 7.50E-53 | -1.69E-46 |
MS.gene056504 | MS.gene070803 | 0.838807 | 2.31E-57 | -1.69E-46 |
MS.gene056510 | MS.gene070803 | 0.823119 | 1.64E-53 | -1.69E-46 |
MS.gene056511 | MS.gene070803 | 0.82242 | 2.39E-53 | -1.69E-46 |
MS.gene05664 | MS.gene070803 | 0.835297 | 1.82E-56 | -1.69E-46 |
MS.gene056657 | MS.gene070803 | 0.83706 | 6.50E-57 | -1.69E-46 |
MS.gene05666 | MS.gene070803 | 0.852482 | 4.48E-61 | -1.69E-46 |
MS.gene056947 | MS.gene070803 | 0.800384 | 1.48E-48 | -1.69E-46 |
MS.gene057019 | MS.gene070803 | 0.804855 | 1.77E-49 | -1.69E-46 |
MS.gene057076 | MS.gene070803 | 0.879032 | 1.73E-69 | -1.69E-46 |
MS.gene057086 | MS.gene070803 | 0.801162 | 1.03E-48 | -1.69E-46 |
MS.gene057331 | MS.gene070803 | 0.80325 | 3.81E-49 | -1.69E-46 |
MS.gene057416 | MS.gene070803 | 0.803686 | 3.10E-49 | -1.69E-46 |
MS.gene057734 | MS.gene070803 | 0.871653 | 5.80E-67 | -1.69E-46 |
MS.gene057856 | MS.gene070803 | 0.803729 | 3.03E-49 | -1.69E-46 |
MS.gene057857 | MS.gene070803 | 0.819782 | 9.69E-53 | -1.69E-46 |
MS.gene05787 | MS.gene070803 | 0.82385 | 1.11E-53 | -1.69E-46 |
MS.gene057926 | MS.gene070803 | 0.831797 | 1.36E-55 | -1.69E-46 |
MS.gene058090 | MS.gene070803 | 0.819551 | 1.09E-52 | -1.69E-46 |
MS.gene058120 | MS.gene070803 | 0.863711 | 2.05E-64 | -1.69E-46 |
MS.gene058130 | MS.gene070803 | 0.847918 | 8.53E-60 | -1.69E-46 |
MS.gene058338 | MS.gene070803 | 0.803605 | 3.22E-49 | -1.69E-46 |
MS.gene05837 | MS.gene070803 | 0.813021 | 3.16E-51 | -1.69E-46 |
MS.gene058419 | MS.gene070803 | 0.813507 | 2.47E-51 | -1.69E-46 |
MS.gene058459 | MS.gene070803 | 0.824391 | 8.28E-54 | -1.69E-46 |
MS.gene058723 | MS.gene070803 | 0.843506 | 1.34E-58 | -1.69E-46 |
MS.gene058773 | MS.gene070803 | 0.832088 | 1.15E-55 | -1.69E-46 |
MS.gene058838 | MS.gene070803 | 0.812064 | 5.12E-51 | -1.69E-46 |
MS.gene058948 | MS.gene070803 | 0.846853 | 1.67E-59 | -1.69E-46 |
MS.gene059022 | MS.gene070803 | 0.812671 | 3.77E-51 | -1.69E-46 |
MS.gene059023 | MS.gene070803 | 0.835542 | 1.58E-56 | -1.69E-46 |
MS.gene05913 | MS.gene070803 | 0.844225 | 8.63E-59 | -1.69E-46 |
MS.gene059305 | MS.gene070803 | 0.834288 | 3.27E-56 | -1.69E-46 |
MS.gene05934 | MS.gene070803 | 0.809444 | 1.89E-50 | -1.69E-46 |
MS.gene059367 | MS.gene070803 | 0.843252 | 1.57E-58 | -1.69E-46 |
MS.gene059368 | MS.gene070803 | 0.837324 | 5.56E-57 | -1.69E-46 |
MS.gene059674 | MS.gene070803 | 0.822775 | 1.98E-53 | -1.69E-46 |
MS.gene059677 | MS.gene070803 | 0.813177 | 2.92E-51 | -1.69E-46 |
MS.gene059680 | MS.gene070803 | 0.849015 | 4.24E-60 | -1.69E-46 |
MS.gene059711 | MS.gene070803 | 0.846381 | 2.25E-59 | -1.69E-46 |
MS.gene059718 | MS.gene070803 | 0.846597 | 1.97E-59 | -1.69E-46 |
MS.gene059801 | MS.gene070803 | 0.827987 | 1.15E-54 | -1.69E-46 |
MS.gene059865 | MS.gene070803 | 0.835588 | 1.54E-56 | -1.69E-46 |
MS.gene05986 | MS.gene070803 | 0.825469 | 4.61E-54 | -1.69E-46 |
MS.gene059902 | MS.gene070803 | 0.826951 | 2.05E-54 | -1.69E-46 |
MS.gene06000 | MS.gene070803 | 0.815425 | 9.31E-52 | -1.69E-46 |
MS.gene060372 | MS.gene070803 | 0.82314 | 1.63E-53 | -1.69E-46 |
MS.gene060482 | MS.gene070803 | 0.829089 | 6.26E-55 | -1.69E-46 |
MS.gene060703 | MS.gene070803 | 0.805877 | 1.08E-49 | -1.69E-46 |
MS.gene060762 | MS.gene070803 | 0.841403 | 4.85E-58 | -1.69E-46 |
MS.gene060778 | MS.gene070803 | 0.845856 | 3.13E-59 | -1.69E-46 |
MS.gene06077 | MS.gene070803 | 0.803494 | 3.39E-49 | -1.69E-46 |
MS.gene060804 | MS.gene070803 | 0.809229 | 2.10E-50 | -1.69E-46 |
MS.gene060818 | MS.gene070803 | 0.801842 | 7.44E-49 | -1.69E-46 |
MS.gene060835 | MS.gene070803 | 0.831763 | 1.39E-55 | -1.69E-46 |
MS.gene060837 | MS.gene070803 | 0.875464 | 3.02E-68 | -1.69E-46 |
MS.gene06097 | MS.gene070803 | 0.863471 | 2.43E-64 | -1.69E-46 |
MS.gene060981 | MS.gene070803 | 0.800551 | 1.37E-48 | -1.69E-46 |
MS.gene060982 | MS.gene070803 | 0.82865 | 7.99E-55 | -1.69E-46 |
MS.gene061041 | MS.gene070803 | 0.816792 | 4.61E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070803.t1 | MTR_4g050000 | 96.850 | 381 | 12 | 0 | 4 | 384 | 1 | 381 | 0.0 | 779 |
MS.gene070803.t1 | MTR_2g087900 | 68.074 | 379 | 116 | 4 | 4 | 378 | 3 | 380 | 0.0 | 521 |
MS.gene070803.t1 | MTR_2g087900 | 68.074 | 379 | 116 | 4 | 4 | 378 | 3 | 380 | 0.0 | 519 |
MS.gene070803.t1 | MTR_2g087900 | 68.074 | 379 | 116 | 4 | 4 | 378 | 3 | 380 | 4.82e-180 | 519 |
MS.gene070803.t1 | MTR_2g087950 | 68.254 | 378 | 117 | 2 | 4 | 379 | 1 | 377 | 5.76e-178 | 514 |
MS.gene070803.t1 | MTR_2g087960 | 63.824 | 387 | 134 | 3 | 4 | 384 | 1 | 387 | 1.93e-175 | 501 |
MS.gene070803.t1 | MTR_2g087960 | 63.824 | 387 | 134 | 3 | 4 | 384 | 1 | 387 | 7.01e-174 | 503 |
MS.gene070803.t1 | MTR_2g087980 | 64.921 | 382 | 128 | 3 | 4 | 384 | 1 | 377 | 8.97e-172 | 497 |
MS.gene070803.t1 | MTR_2g087900 | 67.630 | 346 | 107 | 4 | 4 | 345 | 3 | 347 | 1.73e-164 | 465 |
MS.gene070803.t1 | MTR_2g087900 | 63.598 | 239 | 83 | 3 | 4 | 238 | 3 | 241 | 9.38e-97 | 290 |
MS.gene070803.t1 | MTR_3g060220 | 40.506 | 395 | 216 | 9 | 4 | 383 | 1 | 391 | 5.72e-88 | 281 |
MS.gene070803.t1 | MTR_3g060220 | 40.102 | 394 | 218 | 9 | 4 | 383 | 1 | 390 | 3.41e-87 | 279 |
MS.gene070803.t1 | MTR_3g060240 | 40.409 | 391 | 216 | 9 | 4 | 380 | 1 | 388 | 7.03e-87 | 278 |
MS.gene070803.t1 | MTR_1g098550 | 40.642 | 374 | 205 | 6 | 19 | 375 | 286 | 659 | 5.17e-83 | 274 |
MS.gene070803.t1 | MTR_1g098550 | 40.642 | 374 | 205 | 6 | 19 | 375 | 282 | 655 | 6.29e-83 | 274 |
MS.gene070803.t1 | MTR_3g060280 | 36.272 | 397 | 218 | 7 | 11 | 380 | 10 | 398 | 6.53e-82 | 258 |
MS.gene070803.t1 | MTR_8g063270 | 40.108 | 369 | 205 | 6 | 31 | 383 | 7 | 375 | 2.60e-81 | 265 |
MS.gene070803.t1 | MTR_8g092590 | 39.840 | 374 | 208 | 5 | 19 | 375 | 284 | 657 | 1.34e-80 | 267 |
MS.gene070803.t1 | MTR_8g063270 | 40.108 | 369 | 205 | 6 | 31 | 383 | 212 | 580 | 4.33e-80 | 265 |
MS.gene070803.t1 | MTR_2g035780 | 39.211 | 380 | 214 | 6 | 21 | 383 | 219 | 598 | 4.38e-80 | 265 |
MS.gene070803.t1 | MTR_3g060280 | 36.272 | 397 | 218 | 7 | 11 | 380 | 10 | 398 | 4.39e-80 | 256 |
MS.gene070803.t1 | MTR_4g130510 | 38.992 | 377 | 213 | 6 | 19 | 378 | 246 | 622 | 4.48e-80 | 260 |
MS.gene070803.t1 | MTR_3g060280 | 36.272 | 397 | 218 | 7 | 11 | 380 | 10 | 398 | 5.93e-80 | 256 |
MS.gene070803.t1 | MTR_3g030040 | 39.516 | 372 | 208 | 7 | 21 | 375 | 268 | 639 | 2.78e-79 | 263 |
MS.gene070803.t1 | MTR_4g130510 | 38.992 | 377 | 213 | 6 | 19 | 378 | 246 | 622 | 3.42e-79 | 260 |
MS.gene070803.t1 | MTR_3g060280 | 36.272 | 397 | 218 | 7 | 11 | 380 | 10 | 398 | 1.48e-78 | 256 |
MS.gene070803.t1 | MTR_4g130510 | 38.992 | 377 | 213 | 6 | 19 | 378 | 246 | 622 | 3.27e-78 | 260 |
MS.gene070803.t1 | MTR_8g086600 | 37.634 | 372 | 215 | 5 | 24 | 378 | 196 | 567 | 2.31e-77 | 257 |
MS.gene070803.t1 | MTR_3g007770 | 37.778 | 405 | 220 | 10 | 2 | 376 | 205 | 607 | 4.36e-77 | 257 |
MS.gene070803.t1 | MTR_7g106680 | 39.362 | 376 | 207 | 8 | 19 | 375 | 224 | 597 | 1.25e-76 | 256 |
MS.gene070803.t1 | MTR_2g016630 | 37.634 | 372 | 215 | 6 | 24 | 378 | 181 | 552 | 7.12e-76 | 253 |
MS.gene070803.t1 | MTR_8g037260 | 38.889 | 360 | 203 | 6 | 36 | 378 | 283 | 642 | 1.23e-75 | 253 |
MS.gene070803.t1 | MTR_3g107520 | 38.172 | 372 | 213 | 6 | 24 | 378 | 281 | 652 | 6.40e-74 | 249 |
MS.gene070803.t1 | MTR_1g073740 | 37.569 | 362 | 193 | 6 | 32 | 375 | 33 | 379 | 2.44e-73 | 243 |
MS.gene070803.t1 | MTR_4g088225 | 34.890 | 364 | 219 | 7 | 25 | 375 | 21 | 379 | 2.50e-73 | 242 |
MS.gene070803.t1 | MTR_4g088225 | 34.890 | 364 | 219 | 7 | 25 | 375 | 21 | 379 | 3.55e-73 | 242 |
MS.gene070803.t1 | MTR_1g069605 | 37.097 | 372 | 217 | 6 | 24 | 378 | 111 | 482 | 4.61e-73 | 244 |
MS.gene070803.t1 | MTR_3g005560 | 37.677 | 353 | 190 | 8 | 31 | 375 | 26 | 356 | 5.15e-72 | 231 |
MS.gene070803.t1 | MTR_4g130510 | 35.766 | 411 | 213 | 7 | 19 | 378 | 246 | 656 | 9.04e-72 | 243 |
MS.gene070803.t1 | MTR_3g005560 | 37.110 | 353 | 192 | 8 | 31 | 375 | 26 | 356 | 4.43e-70 | 230 |
MS.gene070803.t1 | MTR_3g005560 | 37.110 | 353 | 192 | 8 | 31 | 375 | 26 | 356 | 5.51e-69 | 230 |
MS.gene070803.t1 | MTR_0011s0020 | 37.360 | 356 | 196 | 9 | 34 | 384 | 29 | 362 | 9.93e-69 | 229 |
MS.gene070803.t1 | MTR_2g037830 | 36.441 | 354 | 200 | 8 | 31 | 379 | 26 | 359 | 1.58e-66 | 220 |
MS.gene070803.t1 | MTR_7g116230 | 33.842 | 393 | 221 | 8 | 24 | 378 | 145 | 536 | 2.68e-65 | 223 |
MS.gene070803.t1 | MTR_2g037830 | 36.338 | 355 | 201 | 8 | 31 | 380 | 26 | 360 | 3.51e-65 | 220 |
MS.gene070803.t1 | MTR_1g039445 | 32.160 | 426 | 217 | 8 | 24 | 378 | 261 | 685 | 8.12e-65 | 223 |
MS.gene070803.t1 | MTR_4g077910 | 32.009 | 428 | 217 | 9 | 24 | 378 | 289 | 715 | 4.04e-64 | 221 |
MS.gene070803.t1 | MTR_5g029190 | 31.178 | 433 | 224 | 9 | 24 | 383 | 268 | 699 | 6.51e-64 | 221 |
MS.gene070803.t1 | MTR_7g109200 | 32.319 | 427 | 216 | 9 | 24 | 378 | 313 | 738 | 3.75e-63 | 219 |
MS.gene070803.t1 | MTR_3g450800 | 35.802 | 324 | 180 | 7 | 59 | 375 | 5 | 307 | 3.93e-63 | 213 |
MS.gene070803.t1 | MTR_1g039480 | 28.037 | 428 | 232 | 9 | 24 | 378 | 275 | 699 | 3.78e-49 | 178 |
MS.gene070803.t1 | MTR_3g091270 | 33.117 | 308 | 153 | 6 | 81 | 383 | 99 | 358 | 5.34e-42 | 154 |
MS.gene070803.t1 | MTR_2g438220 | 36.275 | 204 | 116 | 4 | 24 | 213 | 175 | 378 | 1.57e-33 | 132 |
MS.gene070803.t1 | MTR_2g438220 | 39.535 | 129 | 77 | 1 | 250 | 378 | 475 | 602 | 5.46e-26 | 110 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070803.t1 | AT2G32530 | 51.459 | 377 | 171 | 6 | 11 | 382 | 10 | 379 | 6.43e-130 | 390 |
MS.gene070803.t1 | AT2G32620 | 51.194 | 377 | 172 | 6 | 11 | 382 | 10 | 379 | 2.51e-128 | 380 |
MS.gene070803.t1 | AT4G15320 | 50.000 | 386 | 179 | 7 | 4 | 382 | 1 | 379 | 3.77e-127 | 384 |
MS.gene070803.t1 | AT4G15320 | 50.000 | 386 | 179 | 7 | 4 | 382 | 1 | 379 | 3.78e-127 | 384 |
MS.gene070803.t1 | AT2G32620 | 51.194 | 377 | 172 | 6 | 11 | 382 | 10 | 379 | 6.55e-127 | 378 |
MS.gene070803.t1 | AT2G32620 | 51.194 | 377 | 172 | 6 | 11 | 382 | 10 | 379 | 1.62e-125 | 379 |
MS.gene070803.t1 | AT4G15320 | 48.130 | 401 | 179 | 8 | 4 | 382 | 1 | 394 | 9.75e-124 | 375 |
MS.gene070803.t1 | AT2G32540 | 52.533 | 375 | 168 | 5 | 11 | 381 | 10 | 378 | 1.02e-121 | 369 |
MS.gene070803.t1 | AT2G32610 | 48.936 | 376 | 183 | 4 | 11 | 382 | 10 | 380 | 1.12e-118 | 362 |
MS.gene070803.t1 | AT4G15320 | 44.676 | 432 | 179 | 8 | 4 | 382 | 1 | 425 | 1.34e-118 | 362 |
MS.gene070803.t1 | AT4G15290 | 50.133 | 377 | 176 | 6 | 11 | 382 | 10 | 379 | 7.91e-116 | 354 |
MS.gene070803.t1 | AT4G15320 | 40.632 | 475 | 179 | 10 | 4 | 382 | 1 | 468 | 3.46e-109 | 339 |
MS.gene070803.t1 | AT2G32620 | 53.448 | 290 | 123 | 6 | 98 | 382 | 1 | 283 | 3.37e-101 | 313 |
MS.gene070803.t1 | AT5G09870 | 40.267 | 375 | 207 | 5 | 19 | 376 | 259 | 633 | 1.48e-85 | 281 |
MS.gene070803.t1 | AT1G55850 | 38.760 | 387 | 222 | 5 | 1 | 375 | 8 | 391 | 3.85e-84 | 271 |
MS.gene070803.t1 | AT5G64740 | 39.426 | 383 | 215 | 6 | 19 | 384 | 271 | 653 | 1.03e-82 | 273 |
MS.gene070803.t1 | AT5G44030 | 39.153 | 378 | 211 | 6 | 24 | 383 | 215 | 591 | 9.32e-81 | 267 |
MS.gene070803.t1 | AT5G44030 | 39.153 | 378 | 211 | 6 | 24 | 383 | 244 | 620 | 1.40e-80 | 267 |
MS.gene070803.t1 | AT5G05170 | 40.000 | 375 | 208 | 7 | 21 | 378 | 256 | 630 | 2.08e-80 | 266 |
MS.gene070803.t1 | AT5G17420 | 39.523 | 377 | 211 | 7 | 19 | 378 | 233 | 609 | 4.28e-79 | 263 |
MS.gene070803.t1 | AT4G18780 | 39.572 | 374 | 205 | 6 | 24 | 378 | 184 | 555 | 5.89e-79 | 261 |
MS.gene070803.t1 | AT4G39350 | 40.220 | 363 | 200 | 7 | 31 | 376 | 284 | 646 | 1.34e-78 | 262 |
MS.gene070803.t1 | AT2G21770 | 39.394 | 363 | 203 | 5 | 31 | 376 | 289 | 651 | 1.90e-78 | 261 |
MS.gene070803.t1 | AT2G25540 | 38.172 | 372 | 213 | 6 | 24 | 378 | 255 | 626 | 1.92e-75 | 253 |
MS.gene070803.t1 | AT4G32410 | 38.441 | 372 | 212 | 6 | 24 | 378 | 275 | 646 | 5.51e-75 | 252 |
MS.gene070803.t1 | AT4G24000 | 36.389 | 360 | 210 | 7 | 25 | 375 | 28 | 377 | 1.20e-70 | 235 |
MS.gene070803.t1 | AT4G24010 | 35.933 | 359 | 208 | 7 | 31 | 375 | 37 | 387 | 1.56e-70 | 235 |
MS.gene070803.t1 | AT5G44030 | 41.447 | 304 | 166 | 4 | 91 | 383 | 10 | 312 | 2.28e-70 | 235 |
MS.gene070803.t1 | AT4G23990 | 37.461 | 323 | 183 | 5 | 66 | 375 | 90 | 406 | 1.38e-68 | 230 |
MS.gene070803.t1 | AT1G02730 | 32.791 | 430 | 213 | 8 | 24 | 378 | 318 | 746 | 3.84e-66 | 228 |
MS.gene070803.t1 | AT1G32180 | 31.207 | 439 | 219 | 10 | 24 | 381 | 122 | 558 | 1.34e-64 | 222 |
MS.gene070803.t1 | AT1G32180 | 31.207 | 439 | 219 | 10 | 24 | 381 | 122 | 558 | 1.34e-64 | 222 |
MS.gene070803.t1 | AT3G03050 | 32.787 | 427 | 213 | 11 | 24 | 378 | 294 | 718 | 1.65e-63 | 220 |
MS.gene070803.t1 | AT5G16910 | 30.751 | 426 | 223 | 9 | 24 | 378 | 297 | 721 | 9.27e-61 | 212 |
MS.gene070803.t1 | AT4G38190 | 29.466 | 431 | 232 | 8 | 24 | 383 | 272 | 701 | 3.05e-59 | 207 |
MS.gene070803.t1 | AT2G33100 | 26.790 | 433 | 233 | 13 | 24 | 378 | 183 | 609 | 6.80e-39 | 148 |
MS.gene070803.t1 | AT2G33100 | 26.790 | 433 | 233 | 13 | 24 | 378 | 183 | 609 | 6.80e-39 | 148 |
MS.gene070803.t1 | AT4G24000 | 42.568 | 148 | 82 | 1 | 228 | 375 | 41 | 185 | 5.57e-34 | 132 |
MS.gene070803.t1 | AT4G23990 | 35.602 | 191 | 110 | 4 | 198 | 375 | 2 | 192 | 3.06e-31 | 124 |
Find 82 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTAAGCTTGGGATAGATTT+TGG | 0.112878 | 4.4:+52201596 | None:intergenic |
AAAAGTACAATGTGCAAATT+AGG | 0.126668 | 4.4:-52201890 | MS.gene070803:CDS |
AAGGCATGCATAACAATATT+TGG | 0.170240 | 4.4:+52200328 | None:intergenic |
CCTGAATTTATAAGGTTATA+TGG | 0.180091 | 4.4:-52200626 | MS.gene070803:intron |
CATAGAAGAAAAGTTATTTA+TGG | 0.192304 | 4.4:-52199980 | MS.gene070803:CDS |
ACCATTCTTGTCTGAATTCT+TGG | 0.215541 | 4.4:+52201820 | None:intergenic |
TCATAGAGTGGAAGAGAGTT+TGG | 0.245382 | 4.4:+52203458 | None:intergenic |
TGAAGAGCATAGAAGATTAG+AGG | 0.303612 | 4.4:+52201954 | None:intergenic |
CACAAACAGTACCTTGATTA+TGG | 0.319801 | 4.4:+52201523 | None:intergenic |
ACACTCAAAGACGATCCTTT+TGG | 0.332746 | 4.4:-52200235 | MS.gene070803:CDS |
TTGAAATGATGTGGTTGCTT+TGG | 0.334476 | 4.4:+52200540 | None:intergenic |
TCATCACAAAAGTATCTAAA+TGG | 0.346788 | 4.4:+52201864 | None:intergenic |
TTGTCTGAATTCTTGGTCAT+TGG | 0.361801 | 4.4:+52201827 | None:intergenic |
TTCAAAATTTGCAAAACATT+GGG | 0.368080 | 4.4:-52201925 | MS.gene070803:CDS |
AAACATGGTTCACCTTATCT+TGG | 0.371514 | 4.4:-52203301 | MS.gene070803:CDS |
GCTTGTTACGTTTCTGATGA+TGG | 0.375639 | 4.4:-52201984 | MS.gene070803:CDS |
GAGTGTAGCATAGAATTGTT+GGG | 0.378771 | 4.4:+52200252 | None:intergenic |
CTGAATTTATAAGGTTATAT+GGG | 0.383143 | 4.4:-52200625 | MS.gene070803:intron |
GTTATTCAGACAAGAATCTC+TGG | 0.385137 | 4.4:-52200409 | MS.gene070803:intron |
CATAGAGTGGAAGAGAGTTT+GGG | 0.403453 | 4.4:+52203459 | None:intergenic |
AAAGTACAATGTGCAAATTA+GGG | 0.407961 | 4.4:-52201889 | MS.gene070803:CDS |
TACCTTTGGAGGAGACGGTC+AGG | 0.411734 | 4.4:+52203230 | None:intergenic |
TGAGTGTAGCATAGAATTGT+TGG | 0.415415 | 4.4:+52200251 | None:intergenic |
CTTCAAAATTTGCAAAACAT+TGG | 0.416834 | 4.4:-52201926 | MS.gene070803:CDS |
TGAACAACTACTCTATTCCT+TGG | 0.420933 | 4.4:-52203343 | MS.gene070803:CDS |
AACTCTCCTTCAAGTAAGCT+TGG | 0.422451 | 4.4:+52201584 | None:intergenic |
TTCCTCCGTAGAACATTCCT+TGG | 0.423092 | 4.4:+52200014 | None:intergenic |
GGTACAAACACAATTACAAA+AGG | 0.432125 | 4.4:-52203427 | MS.gene070803:CDS |
ACAGTGTTTATTGTGATGAT+TGG | 0.432496 | 4.4:+52202047 | None:intergenic |
TCTATCCCAAGCTTACTTGA+AGG | 0.451031 | 4.4:-52201590 | MS.gene070803:CDS |
CTCTCCGGATGACGTAGAAA+AGG | 0.462366 | 4.4:-52199954 | MS.gene070803:CDS |
TACCTTGGAGCAGGATTAGC+AGG | 0.473026 | 4.4:-52200040 | MS.gene070803:CDS |
AACAGTACCTTGATTATGGC+TGG | 0.473416 | 4.4:+52201527 | None:intergenic |
AACAAAGAAATGGCTGAAGA+TGG | 0.473942 | 4.4:-52200600 | MS.gene070803:CDS |
GGTAACCAAGCAACAACAAA+AGG | 0.481449 | 4.4:+52203378 | None:intergenic |
ACAAGAATGGTTACAAATGA+AGG | 0.486277 | 4.4:-52201808 | MS.gene070803:intron |
TATATGGGAGAACAAAGAAA+TGG | 0.486548 | 4.4:-52200610 | MS.gene070803:CDS |
ATTGCCATTTGATTTCCAAA+AGG | 0.492263 | 4.4:+52200220 | None:intergenic |
CAATAGTCAAATACCTTTGG+AGG | 0.504802 | 4.4:+52203219 | None:intergenic |
ACTCTCCTTCAAGTAAGCTT+GGG | 0.509268 | 4.4:+52201585 | None:intergenic |
GTCACAAATATATCCACTGC+TGG | 0.509996 | 4.4:+52202095 | None:intergenic |
GTGTTTATTGTGATGATTGG+TGG | 0.517309 | 4.4:+52202050 | None:intergenic |
GATGGTGAAAATCCAAGATA+AGG | 0.523281 | 4.4:+52203289 | None:intergenic |
ATCACCTTAGCTAAGATCAA+TGG | 0.537668 | 4.4:-52203486 | None:intergenic |
TACCAACACATTCATAGCAC+CGG | 0.545351 | 4.4:+52200515 | None:intergenic |
TTATTCAGACAAGAATCTCT+GGG | 0.545619 | 4.4:-52200408 | MS.gene070803:intron |
GTTCAACATGAAGGGTGCAT+TGG | 0.545978 | 4.4:+52200378 | None:intergenic |
AGTTATTTATGGTCTCTCTC+CGG | 0.549554 | 4.4:-52199969 | MS.gene070803:CDS |
TTGCTTTGAGTTGCGAAACA+TGG | 0.553598 | 4.4:-52203316 | MS.gene070803:CDS |
TCTCCGGATGACGTAGAAAA+GGG | 0.558666 | 4.4:-52199953 | MS.gene070803:CDS |
ACAGTCCACGTTCAACATGA+AGG | 0.559978 | 4.4:+52200369 | None:intergenic |
ACCAAGAATTCAGACAAGAA+TGG | 0.561970 | 4.4:-52201821 | MS.gene070803:CDS |
CAACCACATCATTTCAAAGC+CGG | 0.562761 | 4.4:-52200534 | MS.gene070803:CDS |
AAATCATCCAGCCATAATCA+AGG | 0.569735 | 4.4:-52201534 | MS.gene070803:intron |
TAATGTAAACTACAGTACCT+TGG | 0.570475 | 4.4:-52200055 | MS.gene070803:intron |
GTACAAACACAATTACAAAA+GGG | 0.574146 | 4.4:-52203426 | MS.gene070803:CDS |
AAACTACAGTACCTTGGAGC+AGG | 0.577144 | 4.4:-52200049 | MS.gene070803:intron |
GCAGGATTAGCAGGACTCCA+AGG | 0.577239 | 4.4:-52200031 | MS.gene070803:CDS |
ACCTTTGGAGGAGACGGTCA+GGG | 0.577615 | 4.4:+52203231 | None:intergenic |
TCAAATACCTTTGGAGGAGA+CGG | 0.578586 | 4.4:+52203225 | None:intergenic |
GGACTCCAAGGAATGTTCTA+CGG | 0.586185 | 4.4:-52200019 | MS.gene070803:CDS |
TTGGAGGAGACGGTCAGGGT+TGG | 0.591314 | 4.4:+52203235 | None:intergenic |
ACCCTGACCGTCTCCTCCAA+AGG | 0.592049 | 4.4:-52203232 | MS.gene070803:intron |
TAACAAGCTAGCTTGTGAGA+TGG | 0.592884 | 4.4:+52201999 | None:intergenic |
TCTTAGCCGTAAAATAGATG+TGG | 0.602585 | 4.4:-52201621 | MS.gene070803:CDS |
CTAGATATGTAGATCAAATG+TGG | 0.606209 | 4.4:+52200573 | None:intergenic |
TGGACTCCATTGAGTGGAGA+TGG | 0.606499 | 4.4:+52203271 | None:intergenic |
AGTGTAGCATAGAATTGTTG+GGG | 0.620173 | 4.4:+52200253 | None:intergenic |
CAGTCCACGTTCAACATGAA+GGG | 0.622642 | 4.4:+52200370 | None:intergenic |
GTCCTGCTAATCCTGCTCCA+AGG | 0.623330 | 4.4:+52200038 | None:intergenic |
TGTGCAAGAACTTCCAGCAG+TGG | 0.635221 | 4.4:-52202108 | MS.gene070803:CDS |
TCTACATATCTAGAGAGAAG+AGG | 0.638871 | 4.4:-52200563 | MS.gene070803:CDS |
AAAGGCTGGACTCCATTGAG+TGG | 0.643881 | 4.4:+52203265 | None:intergenic |
AACCAAGCAACAACAAAAGG+AGG | 0.647360 | 4.4:+52203381 | None:intergenic |
GGAGTCAAGCAAAATGCACA+AGG | 0.647589 | 4.4:+52200309 | None:intergenic |
CAACTCAAAGCAATAAACCA+AGG | 0.655551 | 4.4:+52203326 | None:intergenic |
TGCACCCTTCATGTTGAACG+TGG | 0.656187 | 4.4:-52200374 | MS.gene070803:CDS |
GCACCGGCTTTGAAATGATG+TGG | 0.666221 | 4.4:+52200531 | None:intergenic |
AGCCGGTGCTATGAATGTGT+TGG | 0.669526 | 4.4:-52200517 | MS.gene070803:intron |
GAGTGGAAGAGAGTTTGGGT+TGG | 0.681543 | 4.4:+52203463 | None:intergenic |
AGTTGTTCACATACATAACA+CGG | 0.687770 | 4.4:+52203357 | None:intergenic |
CTCCAAGGAATGTTCTACGG+AGG | 0.709897 | 4.4:-52200016 | MS.gene070803:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATTTTTTATTTTATTTTT+AGG | + | chr4.4:52201180-52201199 | None:intergenic | 0.0% |
!!! | TTTAAAAATCACAATTTTTT+GGG | - | chr4.4:52200915-52200934 | MS.gene070803:intron | 10.0% |
!!! | TTTTAATTTATATTAGTGAT+CGG | - | chr4.4:52200442-52200461 | MS.gene070803:intron | 10.0% |
!!! | TTTTTTTTTTAAGGAAAAAT+TGG | + | chr4.4:52202130-52202149 | None:intergenic | 10.0% |
!! | AATTTATGTTTATTGAAAAG+CGG | - | chr4.4:52200358-52200377 | MS.gene070803:CDS | 15.0% |
!! | ATACAAATTGAAAATATGTT+AGG | + | chr4.4:52202969-52202988 | None:intergenic | 15.0% |
!! | ATTCAAATTTCATAATAGTT+TGG | + | chr4.4:52201015-52201034 | None:intergenic | 15.0% |
!! | TACAAATTGAAAATATGTTA+GGG | + | chr4.4:52202968-52202987 | None:intergenic | 15.0% |
!! | TGATAAATTAATTGTTATGA+AGG | + | chr4.4:52200255-52200274 | None:intergenic | 15.0% |
!!! | AAAAGATATTTTAAAACGAA+GGG | + | chr4.4:52202195-52202214 | None:intergenic | 15.0% |
!!! | AAATTCTTTAGAATCTTAAA+TGG | - | chr4.4:52202929-52202948 | MS.gene070803:intron | 15.0% |
!!! | AATTATGTTTCATCTAAAAT+AGG | + | chr4.4:52200691-52200710 | None:intergenic | 15.0% |
!!! | ATTTATTTTCTTAGAAGTTT+TGG | - | chr4.4:52200293-52200312 | MS.gene070803:CDS | 15.0% |
!!! | GTCAAAAATCATTAATTTTT+GGG | + | chr4.4:52200798-52200817 | None:intergenic | 15.0% |
!!! | GTTTAAAAATCACAATTTTT+TGG | - | chr4.4:52200914-52200933 | MS.gene070803:intron | 15.0% |
!!! | TAAAAGATATTTTAAAACGA+AGG | + | chr4.4:52202196-52202215 | None:intergenic | 15.0% |
!!! | TATTTTTAAATTCGAGTTTA+TGG | - | chr4.4:52200719-52200738 | MS.gene070803:intron | 15.0% |
!!! | TTTTCAAATATTTACTCAAA+TGG | - | chr4.4:52200529-52200548 | MS.gene070803:CDS | 15.0% |
!!! | TTTTCTGTTATAATAGTTAT+CGG | + | chr4.4:52200331-52200350 | None:intergenic | 15.0% |
!! | AAATTGTATAATATATGCAG+AGG | - | chr4.4:52202493-52202512 | MS.gene070803:intron | 20.0% |
!! | AATTATAGAATTATAACTGG+TGG | - | chr4.4:52200869-52200888 | MS.gene070803:intron | 20.0% |
!! | ATAATATTGATCAGATACAT+CGG | - | chr4.4:52200394-52200413 | MS.gene070803:CDS | 20.0% |
!! | ATTATAGAATTATAACTGGT+GGG | - | chr4.4:52200870-52200889 | MS.gene070803:intron | 20.0% |
!! | CAGAATTATAGAATTATAAC+TGG | - | chr4.4:52200866-52200885 | MS.gene070803:intron | 20.0% |
!! | CATAGAAGAAAAGTTATTTA+TGG | - | chr4.4:52203442-52203461 | MS.gene070803:CDS | 20.0% |
!! | CTGAATTTATAAGGTTATAT+GGG | - | chr4.4:52202797-52202816 | MS.gene070803:intron | 20.0% |
!! | GAATCAAATATTCATGAATT+CGG | + | chr4.4:52202090-52202109 | None:intergenic | 20.0% |
!! | TTCAAAATTTGCAAAACATT+GGG | - | chr4.4:52201497-52201516 | MS.gene070803:intron | 20.0% |
!!! | ACATTGTACTTTTTACAAAA+TGG | + | chr4.4:52201525-52201544 | None:intergenic | 20.0% |
!!! | GGTCAAAAATCATTAATTTT+TGG | + | chr4.4:52200799-52200818 | None:intergenic | 20.0% |
!!! | TTCATGATGAATGTTTTTTT+TGG | + | chr4.4:52202591-52202610 | None:intergenic | 20.0% |
!!! | TTTGGTTCTTAATAGTTTTT+AGG | + | chr4.4:52200997-52201016 | None:intergenic | 20.0% |
! | AAAGTACAATGTGCAAATTA+GGG | - | chr4.4:52201533-52201552 | MS.gene070803:intron | 25.0% |
! | AATCAATAGTCAAATACCTT+TGG | + | chr4.4:52200209-52200228 | None:intergenic | 25.0% |
! | AATTTATATTAGTGATCGGA+TGG | - | chr4.4:52200446-52200465 | MS.gene070803:intron | 25.0% |
! | ATTACTTGCAAAAATAACAC+TGG | - | chr4.4:52202661-52202680 | MS.gene070803:intron | 25.0% |
! | CCATATAACCTTATAAATTC+AGG | + | chr4.4:52202799-52202818 | None:intergenic | 25.0% |
! | CCTGAATTTATAAGGTTATA+TGG | - | chr4.4:52202796-52202815 | MS.gene070803:intron | 25.0% |
! | CTTCAAAATTTGCAAAACAT+TGG | - | chr4.4:52201496-52201515 | MS.gene070803:intron | 25.0% |
! | GTACAAACACAATTACAAAA+GGG | - | chr4.4:52199996-52200015 | MS.gene070803:CDS | 25.0% |
! | TCAATATTGGTGAACAAAAT+TGG | + | chr4.4:52202166-52202185 | None:intergenic | 25.0% |
! | TGCATTATTATTAGTATCAC+TGG | + | chr4.4:52201689-52201708 | None:intergenic | 25.0% |
! | TTCCACTCTATGAAAAATAT+TGG | - | chr4.4:52199974-52199993 | MS.gene070803:CDS | 25.0% |
!! | AAAAGTACAATGTGCAAATT+AGG | - | chr4.4:52201532-52201551 | MS.gene070803:intron | 25.0% |
!! | TACCAATATTTTTCATAGAG+TGG | + | chr4.4:52199979-52199998 | None:intergenic | 25.0% |
!! | TATGTTTCATCTAAAATAGG+AGG | + | chr4.4:52200688-52200707 | None:intergenic | 25.0% |
!! | TCAAATGGCAATTTTGTATA+AGG | - | chr4.4:52203213-52203232 | MS.gene070803:intron | 25.0% |
!! | TGATTTTTAAACCCTAAAGT+GGG | + | chr4.4:52200906-52200925 | None:intergenic | 25.0% |
!! | TTTCTTTTGACAGGTAATTA+AGG | + | chr4.4:52202744-52202763 | None:intergenic | 25.0% |
!!! | CTTTTTAAGGAGAATAAGTT+GGG | + | chr4.4:52202540-52202559 | None:intergenic | 25.0% |
!!! | GTTATTTTCACTTTTCAATG+TGG | + | chr4.4:52202389-52202408 | None:intergenic | 25.0% |
!!! | TCATCACAAAAGTATCTAAA+TGG | + | chr4.4:52201561-52201580 | None:intergenic | 25.0% |
AAGGCATGCATAACAATATT+TGG | + | chr4.4:52203097-52203116 | None:intergenic | 30.0% | |
ACAAACATAATTGATGAGTG+TGG | - | chr4.4:52201075-52201094 | MS.gene070803:intron | 30.0% | |
ACAAGAATGGTTACAAATGA+AGG | - | chr4.4:52201614-52201633 | MS.gene070803:CDS | 30.0% | |
ACAGTGTTTATTGTGATGAT+TGG | + | chr4.4:52201378-52201397 | None:intergenic | 30.0% | |
AGCAAAAATGTGAGAAATTG+AGG | + | chr4.4:52200747-52200766 | None:intergenic | 30.0% | |
AGTTGTTCACATACATAACA+CGG | + | chr4.4:52200068-52200087 | None:intergenic | 30.0% | |
CCAACTTATTCTCCTTAAAA+AGG | - | chr4.4:52202538-52202557 | MS.gene070803:intron | 30.0% | |
CTAGATATGTAGATCAAATG+TGG | + | chr4.4:52202852-52202871 | None:intergenic | 30.0% | |
CTGTTATAATAGTTATCGGA+GGG | + | chr4.4:52200327-52200346 | None:intergenic | 30.0% | |
CTTACATGATGCTAATTAGA+TGG | - | chr4.4:52202334-52202353 | MS.gene070803:intron | 30.0% | |
GCAAAAATGTGAGAAATTGA+GGG | + | chr4.4:52200746-52200765 | None:intergenic | 30.0% | |
GGTACAAACACAATTACAAA+AGG | - | chr4.4:52199995-52200014 | MS.gene070803:CDS | 30.0% | |
TAATGTAAACTACAGTACCT+TGG | - | chr4.4:52203367-52203386 | MS.gene070803:CDS | 30.0% | |
TACAATGCATAACATATGCA+AGG | - | chr4.4:52200590-52200609 | MS.gene070803:CDS | 30.0% | |
TAGAGCAAAAATACCACTTT+GGG | + | chr4.4:52200821-52200840 | None:intergenic | 30.0% | |
TATATGGGAGAACAAAGAAA+TGG | - | chr4.4:52202812-52202831 | MS.gene070803:intron | 30.0% | |
TCTGTTATAATAGTTATCGG+AGG | + | chr4.4:52200328-52200347 | None:intergenic | 30.0% | |
TGCAAGAAATTGAAGTCATT+GGG | - | chr4.4:52201046-52201065 | MS.gene070803:intron | 30.0% | |
TTAGAGCAAAAATACCACTT+TGG | + | chr4.4:52200822-52200841 | None:intergenic | 30.0% | |
TTATTCAGACAAGAATCTCT+GGG | - | chr4.4:52203014-52203033 | MS.gene070803:intron | 30.0% | |
TTGCAAGAAATTGAAGTCAT+TGG | - | chr4.4:52201045-52201064 | MS.gene070803:intron | 30.0% | |
! | AAAAACCGTTTGACATTTTG+TGG | + | chr4.4:52201748-52201767 | None:intergenic | 30.0% |
! | ATTGCCATTTGATTTCCAAA+AGG | + | chr4.4:52203205-52203224 | None:intergenic | 30.0% |
! | CAGTTTTCTCAAATACTAAC+AGG | - | chr4.4:52201863-52201882 | MS.gene070803:CDS | 30.0% |
! | CTTTTTAACAGTGATAGACA+TGG | - | chr4.4:52201268-52201287 | MS.gene070803:intron | 30.0% |
! | GCTATATTTTGTTCCCAATT+TGG | - | chr4.4:52200764-52200783 | MS.gene070803:intron | 30.0% |
! | GTGATTTTTAAACCCTAAAG+TGG | + | chr4.4:52200907-52200926 | None:intergenic | 30.0% |
! | TAGACATGTTTTCTTTTGAC+AGG | + | chr4.4:52202753-52202772 | None:intergenic | 30.0% |
!! | CCTTTTTAAGGAGAATAAGT+TGG | + | chr4.4:52202541-52202560 | None:intergenic | 30.0% |
!! | TAATTTTGATCGAACGACTA+CGG | + | chr4.4:52201968-52201987 | None:intergenic | 30.0% |
!!! | AATTTTTTGGGTCAAAACAC+AGG | - | chr4.4:52200927-52200946 | MS.gene070803:intron | 30.0% |
!!! | TTTTTGGTTATATAGCCAAG+TGG | + | chr4.4:52202575-52202594 | None:intergenic | 30.0% |
AAACATGGTTCACCTTATCT+TGG | - | chr4.4:52200121-52200140 | MS.gene070803:intron | 35.0% | |
AAATCATCCAGCCATAATCA+AGG | - | chr4.4:52201888-52201907 | MS.gene070803:CDS | 35.0% | |
AACAAAGAAATGGCTGAAGA+TGG | - | chr4.4:52202822-52202841 | MS.gene070803:intron | 35.0% | |
ACCAAGAATTCAGACAAGAA+TGG | - | chr4.4:52201601-52201620 | MS.gene070803:CDS | 35.0% | |
ACCATTCTTGTCTGAATTCT+TGG | + | chr4.4:52201605-52201624 | None:intergenic | 35.0% | |
AGAGCAAAAATACCACTTTG+GGG | + | chr4.4:52200820-52200839 | None:intergenic | 35.0% | |
AGTGTAGCATAGAATTGTTG+GGG | + | chr4.4:52203172-52203191 | None:intergenic | 35.0% | |
AGTTATTTATGGTCTCTCTC+CGG | - | chr4.4:52203453-52203472 | MS.gene070803:CDS | 35.0% | |
ATGATGCTAATTAGATGGCA+TGG | - | chr4.4:52202339-52202358 | MS.gene070803:intron | 35.0% | |
CAACTCAAAGCAATAAACCA+AGG | + | chr4.4:52200099-52200118 | None:intergenic | 35.0% | |
CAATAGTCAAATACCTTTGG+AGG | + | chr4.4:52200206-52200225 | None:intergenic | 35.0% | |
CACAAACAGTACCTTGATTA+TGG | + | chr4.4:52201902-52201921 | None:intergenic | 35.0% | |
CATACATATCCTGTCAACAA+GGG | + | chr4.4:52201777-52201796 | None:intergenic | 35.0% | |
GAGTGTAGCATAGAATTGTT+GGG | + | chr4.4:52203173-52203192 | None:intergenic | 35.0% | |
GATGGTGAAAATCCAAGATA+AGG | + | chr4.4:52200136-52200155 | None:intergenic | 35.0% | |
GCTCACTTCCTGAATTTATA+AGG | - | chr4.4:52202788-52202807 | MS.gene070803:intron | 35.0% | |
GTGTTTATTGTGATGATTGG+TGG | + | chr4.4:52201375-52201394 | None:intergenic | 35.0% | |
GTTATTCAGACAAGAATCTC+TGG | - | chr4.4:52203013-52203032 | MS.gene070803:intron | 35.0% | |
TAACACTTAAAGCCTGTGTT+CGG | + | chr4.4:52200631-52200650 | None:intergenic | 35.0% | |
TACTTGCAAAAACTTTGCAC+AGG | - | chr4.4:52202687-52202706 | MS.gene070803:intron | 35.0% | |
TATTCATGAATTCGGAACGT+TGG | + | chr4.4:52202082-52202101 | None:intergenic | 35.0% | |
TCATACATATCCTGTCAACA+AGG | + | chr4.4:52201778-52201797 | None:intergenic | 35.0% | |
TCTACATATCTAGAGAGAAG+AGG | - | chr4.4:52202859-52202878 | MS.gene070803:intron | 35.0% | |
TCTGACCACAAAATGTCAAA+CGG | - | chr4.4:52201740-52201759 | MS.gene070803:intron | 35.0% | |
TCTTAGCCGTAAAATAGATG+TGG | - | chr4.4:52201801-52201820 | MS.gene070803:intron | 35.0% | |
TGAACAACTACTCTATTCCT+TGG | - | chr4.4:52200079-52200098 | MS.gene070803:intron | 35.0% | |
TGAGTGTAGCATAGAATTGT+TGG | + | chr4.4:52203174-52203193 | None:intergenic | 35.0% | |
TGCATAACATATGCAAGGTT+CGG | - | chr4.4:52200595-52200614 | MS.gene070803:CDS | 35.0% | |
TGTCAATTGAGCTAAACTCA+CGG | + | chr4.4:52202470-52202489 | None:intergenic | 35.0% | |
TTGAAATGATGTGGTTGCTT+TGG | + | chr4.4:52202885-52202904 | None:intergenic | 35.0% | |
TTGGGTGAAAAGACCAAATT+GGG | + | chr4.4:52200780-52200799 | None:intergenic | 35.0% | |
TTGTCTGAATTCTTGGTCAT+TGG | + | chr4.4:52201598-52201617 | None:intergenic | 35.0% | |
TTTGGGTGAAAAGACCAAAT+TGG | + | chr4.4:52200781-52200800 | None:intergenic | 35.0% | |
! | AACCCTAAAGTGGGAATTTT+CGG | + | chr4.4:52200897-52200916 | None:intergenic | 35.0% |
! | AATGATTTTTGACCCCAAAG+TGG | - | chr4.4:52200805-52200824 | MS.gene070803:intron | 35.0% |
! | AGTAAGCTTGGGATAGATTT+TGG | + | chr4.4:52201829-52201848 | None:intergenic | 35.0% |
! | CGAAGGGTTTGTTTCAATAT+TGG | + | chr4.4:52202179-52202198 | None:intergenic | 35.0% |
! | GCTCGAAATTCTCCTTTTTA+AGG | + | chr4.4:52202553-52202572 | None:intergenic | 35.0% |
! | GTAAGCTTGGGATAGATTTT+GGG | + | chr4.4:52201828-52201847 | None:intergenic | 35.0% |
! | TGAAGAGCATAGAAGATTAG+AGG | + | chr4.4:52201471-52201490 | None:intergenic | 35.0% |
! | TTGGGTCCACATCTATTTTA+CGG | + | chr4.4:52201810-52201829 | None:intergenic | 35.0% |
!! | CATAATCAAGGTACTGTTTG+TGG | - | chr4.4:52201900-52201919 | MS.gene070803:CDS | 35.0% |
!! | CGATCCTTTTGGAAATCAAA+TGG | - | chr4.4:52203198-52203217 | MS.gene070803:intron | 35.0% |
AACACTTAAAGCCTGTGTTC+GGG | + | chr4.4:52200630-52200649 | None:intergenic | 40.0% | |
AACAGTACCTTGATTATGGC+TGG | + | chr4.4:52201898-52201917 | None:intergenic | 40.0% | |
AACCAAGCAACAACAAAAGG+AGG | + | chr4.4:52200044-52200063 | None:intergenic | 40.0% | |
AACTCTCCTTCAAGTAAGCT+TGG | + | chr4.4:52201841-52201860 | None:intergenic | 40.0% | |
ACTCTCCTTCAAGTAAGCTT+GGG | + | chr4.4:52201840-52201859 | None:intergenic | 40.0% | |
CAACCACATCATTTCAAAGC+CGG | - | chr4.4:52202888-52202907 | MS.gene070803:intron | 40.0% | |
CATAGAGTGGAAGAGAGTTT+GGG | + | chr4.4:52199966-52199985 | None:intergenic | 40.0% | |
GACCGAAAATTCCCACTTTA+GGG | - | chr4.4:52200892-52200911 | MS.gene070803:intron | 40.0% | |
GCATAACATATGCAAGGTTC+GGG | - | chr4.4:52200596-52200615 | MS.gene070803:CDS | 40.0% | |
GGTAACCAAGCAACAACAAA+AGG | + | chr4.4:52200047-52200066 | None:intergenic | 40.0% | |
GTCACAAATATATCCACTGC+TGG | + | chr4.4:52201330-52201349 | None:intergenic | 40.0% | |
TACCAACACATTCATAGCAC+CGG | + | chr4.4:52202910-52202929 | None:intergenic | 40.0% | |
TCATAGAGTGGAAGAGAGTT+TGG | + | chr4.4:52199967-52199986 | None:intergenic | 40.0% | |
TCTATCCCAAGCTTACTTGA+AGG | - | chr4.4:52201832-52201851 | MS.gene070803:CDS | 40.0% | |
TGCATTGTACCTATCAACTG+AGG | + | chr4.4:52200579-52200598 | None:intergenic | 40.0% | |
TTTGGGTCAAAACACAGGTT+AGG | - | chr4.4:52200932-52200951 | MS.gene070803:intron | 40.0% | |
! | ACACTCAAAGACGATCCTTT+TGG | - | chr4.4:52203187-52203206 | MS.gene070803:intron | 40.0% |
! | AGAATAAGTTGGGTGTCCAA+GGG | + | chr4.4:52202530-52202549 | None:intergenic | 40.0% |
! | AGCTACTTCTTTTTCCCCTT+TGG | + | chr4.4:52203137-52203156 | None:intergenic | 40.0% |
! | CATTTTGCTTGACTCCAAAG+GGG | - | chr4.4:52203120-52203139 | MS.gene070803:intron | 40.0% |
! | GCATTTTGCTTGACTCCAAA+GGG | - | chr4.4:52203119-52203138 | MS.gene070803:intron | 40.0% |
! | GCTTGTTACGTTTCTGATGA+TGG | - | chr4.4:52201438-52201457 | MS.gene070803:intron | 40.0% |
! | TAACAAGCTAGCTTGTGAGA+TGG | + | chr4.4:52201426-52201445 | None:intergenic | 40.0% |
! | TCAAATACCTTTGGAGGAGA+CGG | + | chr4.4:52200200-52200219 | None:intergenic | 40.0% |
! | TGCATTTTGCTTGACTCCAA+AGG | - | chr4.4:52203118-52203137 | MS.gene070803:intron | 40.0% |
! | TTTGTTTCTCCCTTGTTGAC+AGG | - | chr4.4:52201765-52201784 | MS.gene070803:intron | 40.0% |
! | TTTTCACCATCTCCACTCAA+TGG | - | chr4.4:52200145-52200164 | MS.gene070803:intron | 40.0% |
!! | TTGCTTTGAGTTGCGAAACA+TGG | - | chr4.4:52200106-52200125 | MS.gene070803:intron | 40.0% |
!!! | ATCCTCCTTTTGTTGTTGCT+TGG | - | chr4.4:52200039-52200058 | MS.gene070803:CDS | 40.0% |
!!! | GTCAGGGTTGGTTTTGATAA+AGG | + | chr4.4:52200178-52200197 | None:intergenic | 40.0% |
AAACTACAGTACCTTGGAGC+AGG | - | chr4.4:52203373-52203392 | MS.gene070803:CDS | 45.0% | |
AAGGAGAATTTCGAGCCACT+TGG | - | chr4.4:52202557-52202576 | MS.gene070803:intron | 45.0% | |
ACACTTAAAGCCTGTGTTCG+GGG | + | chr4.4:52200629-52200648 | None:intergenic | 45.0% | |
ACAGTCCACGTTCAACATGA+AGG | + | chr4.4:52203056-52203075 | None:intergenic | 45.0% | |
CAGTCCACGTTCAACATGAA+GGG | + | chr4.4:52203055-52203074 | None:intergenic | 45.0% | |
GGACCGAAAATTCCCACTTT+AGG | - | chr4.4:52200891-52200910 | MS.gene070803:intron | 45.0% | |
GGACTCCAAGGAATGTTCTA+CGG | - | chr4.4:52203403-52203422 | MS.gene070803:CDS | 45.0% | |
GGAGTCAAGCAAAATGCACA+AGG | + | chr4.4:52203116-52203135 | None:intergenic | 45.0% | |
GTGAGCTTACCTCAGTTGAT+AGG | - | chr4.4:52200567-52200586 | MS.gene070803:CDS | 45.0% | |
TCTCCGGATGACGTAGAAAA+GGG | - | chr4.4:52203469-52203488 | MS.gene070803:CDS | 45.0% | |
TTCAAATGCGCGAATGTGTG+TGG | + | chr4.4:52201941-52201960 | None:intergenic | 45.0% | |
TTCCTCCGTAGAACATTCCT+TGG | + | chr4.4:52203411-52203430 | None:intergenic | 45.0% | |
! | GAGAATAAGTTGGGTGTCCA+AGG | + | chr4.4:52202531-52202550 | None:intergenic | 45.0% |
! | GTACCCTTTTCTACGTCATC+CGG | + | chr4.4:52203475-52203494 | None:intergenic | 45.0% |
! | GTTCAACATGAAGGGTGCAT+TGG | + | chr4.4:52203047-52203066 | None:intergenic | 45.0% |
!! | TCAAGGTACTGTTTGTGGTC+CGG | - | chr4.4:52201905-52201924 | MS.gene070803:CDS | 45.0% |
!!! | GGGTTGGTTTTGATAAAGGC+TGG | + | chr4.4:52200174-52200193 | None:intergenic | 45.0% |
!! | AAGAAAATAAATTATTAATT+AGG | + | chr4.4:52200285-52200304 | None:intergenic | 5.0% |
!!! | ACTTTTTTTTTTTTTTTTTA+AGG | + | chr4.4:52202139-52202158 | None:intergenic | 5.0% |
!!! | TTTATTTTTTAATATAAGAA+AGG | - | chr4.4:52201649-52201668 | MS.gene070803:intron | 5.0% |
AAAGGCTGGACTCCATTGAG+TGG | + | chr4.4:52200160-52200179 | None:intergenic | 50.0% | |
AGAGGTTGTGATTCGACCCT+TGG | - | chr4.4:52202511-52202530 | MS.gene070803:intron | 50.0% | |
CTCCAAGGAATGTTCTACGG+AGG | - | chr4.4:52203406-52203425 | MS.gene070803:CDS | 50.0% | |
CTCTCCGGATGACGTAGAAA+AGG | - | chr4.4:52203468-52203487 | MS.gene070803:CDS | 50.0% | |
GAGTGGAAGAGAGTTTGGGT+TGG | + | chr4.4:52199962-52199981 | None:intergenic | 50.0% | |
TGCACCCTTCATGTTGAACG+TGG | - | chr4.4:52203048-52203067 | MS.gene070803:intron | 50.0% | |
TGGACTCCATTGAGTGGAGA+TGG | + | chr4.4:52200154-52200173 | None:intergenic | 50.0% | |
TGTGCAAGAACTTCCAGCAG+TGG | - | chr4.4:52201314-52201333 | MS.gene070803:intron | 50.0% | |
TGTGTGTGGTTCCTAACAGC+CGG | + | chr4.4:52201927-52201946 | None:intergenic | 50.0% | |
! | TACCTTGGAGCAGGATTAGC+AGG | - | chr4.4:52203382-52203401 | MS.gene070803:CDS | 50.0% |
!! | AGCCGGTGCTATGAATGTGT+TGG | - | chr4.4:52202905-52202924 | MS.gene070803:intron | 50.0% |
!! | GCACCGGCTTTGAAATGATG+TGG | + | chr4.4:52202894-52202913 | None:intergenic | 50.0% |
CTGTTTGTGGTCCGGCTGTT+AGG | - | chr4.4:52201913-52201932 | MS.gene070803:CDS | 55.0% | |
GTCCTGCTAATCCTGCTCCA+AGG | + | chr4.4:52203387-52203406 | None:intergenic | 55.0% | |
! | ACCTTTGGAGGAGACGGTCA+GGG | + | chr4.4:52200194-52200213 | None:intergenic | 55.0% |
! | GCAGGATTAGCAGGACTCCA+AGG | - | chr4.4:52203391-52203410 | MS.gene070803:CDS | 55.0% |
! | TACCTTTGGAGGAGACGGTC+AGG | + | chr4.4:52200195-52200214 | None:intergenic | 55.0% |
ACCCTGACCGTCTCCTCCAA+AGG | - | chr4.4:52200190-52200209 | MS.gene070803:intron | 60.0% | |
GGGATTCGAACCCCGAACAC+AGG | - | chr4.4:52200616-52200635 | MS.gene070803:intron | 60.0% | |
TTGGAGGAGACGGTCAGGGT+TGG | + | chr4.4:52200190-52200209 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 52199946 | 52203498 | 52199946 | ID=MS.gene070803 |
chr4.4 | mRNA | 52199946 | 52203498 | 52199946 | ID=MS.gene070803.t1;Parent=MS.gene070803 |
chr4.4 | exon | 52203233 | 52203498 | 52203233 | ID=MS.gene070803.t1.exon1;Parent=MS.gene070803.t1 |
chr4.4 | CDS | 52203233 | 52203498 | 52203233 | ID=cds.MS.gene070803.t1;Parent=MS.gene070803.t1 |
chr4.4 | exon | 52201809 | 52202130 | 52201809 | ID=MS.gene070803.t1.exon2;Parent=MS.gene070803.t1 |
chr4.4 | CDS | 52201809 | 52202130 | 52201809 | ID=cds.MS.gene070803.t1;Parent=MS.gene070803.t1 |
chr4.4 | exon | 52201535 | 52201657 | 52201535 | ID=MS.gene070803.t1.exon3;Parent=MS.gene070803.t1 |
chr4.4 | CDS | 52201535 | 52201657 | 52201535 | ID=cds.MS.gene070803.t1;Parent=MS.gene070803.t1 |
chr4.4 | exon | 52200518 | 52200634 | 52200518 | ID=MS.gene070803.t1.exon4;Parent=MS.gene070803.t1 |
chr4.4 | CDS | 52200518 | 52200634 | 52200518 | ID=cds.MS.gene070803.t1;Parent=MS.gene070803.t1 |
chr4.4 | exon | 52200210 | 52200422 | 52200210 | ID=MS.gene070803.t1.exon5;Parent=MS.gene070803.t1 |
chr4.4 | CDS | 52200210 | 52200422 | 52200210 | ID=cds.MS.gene070803.t1;Parent=MS.gene070803.t1 |
chr4.4 | exon | 52199946 | 52200062 | 52199946 | ID=MS.gene070803.t1.exon6;Parent=MS.gene070803.t1 |
chr4.4 | CDS | 52199946 | 52200062 | 52199946 | ID=cds.MS.gene070803.t1;Parent=MS.gene070803.t1 |
Gene Sequence |
Protein sequence |