Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51649.t1 | AFK46340.1 | 99.4 | 162 | 1 | 0 | 1 | 162 | 1 | 162 | 8.60E-83 | 316.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51649.t1 | Q9S7N7 | 70.3 | 165 | 41 | 3 | 1 | 162 | 1 | 160 | 4.5e-56 | 218.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51649.t1 | I3T1E8 | 99.4 | 162 | 1 | 0 | 1 | 162 | 1 | 162 | 6.2e-83 | 316.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene51649 | 0.84158 | 4.36E-58 | -1.69E-46 |
MS.gene049171 | MS.gene51649 | 0.807837 | 4.16E-50 | -1.69E-46 |
MS.gene049173 | MS.gene51649 | 0.823708 | 1.20E-53 | -1.69E-46 |
MS.gene049217 | MS.gene51649 | 0.802455 | 5.57E-49 | -1.69E-46 |
MS.gene049222 | MS.gene51649 | 0.800524 | 1.38E-48 | -1.69E-46 |
MS.gene049285 | MS.gene51649 | 0.815334 | 9.75E-52 | -1.69E-46 |
MS.gene049320 | MS.gene51649 | 0.829372 | 5.34E-55 | -1.69E-46 |
MS.gene049369 | MS.gene51649 | 0.8304 | 3.00E-55 | -1.69E-46 |
MS.gene049427 | MS.gene51649 | 0.842163 | 3.06E-58 | -1.69E-46 |
MS.gene049609 | MS.gene51649 | 0.86635 | 3.04E-65 | -1.69E-46 |
MS.gene049661 | MS.gene51649 | 0.865491 | 5.68E-65 | -1.69E-46 |
MS.gene049662 | MS.gene51649 | 0.851092 | 1.11E-60 | -1.69E-46 |
MS.gene049805 | MS.gene51649 | 0.879444 | 1.24E-69 | -1.69E-46 |
MS.gene050076 | MS.gene51649 | 0.827693 | 1.36E-54 | -1.69E-46 |
MS.gene050163 | MS.gene51649 | 0.806502 | 7.97E-50 | -1.69E-46 |
MS.gene050301 | MS.gene51649 | 0.801632 | 8.22E-49 | -1.69E-46 |
MS.gene050397 | MS.gene51649 | 0.824591 | 7.43E-54 | -1.69E-46 |
MS.gene050406 | MS.gene51649 | 0.802999 | 4.30E-49 | -1.69E-46 |
MS.gene050432 | MS.gene51649 | 0.850879 | 1.28E-60 | -1.69E-46 |
MS.gene050593 | MS.gene51649 | 0.846162 | 2.58E-59 | -1.69E-46 |
MS.gene050670 | MS.gene51649 | 0.836312 | 1.01E-56 | -1.69E-46 |
MS.gene050686 | MS.gene51649 | 0.824981 | 6.01E-54 | -1.69E-46 |
MS.gene050699 | MS.gene51649 | 0.801282 | 9.69E-49 | -1.69E-46 |
MS.gene050747 | MS.gene51649 | 0.815403 | 9.41E-52 | -1.69E-46 |
MS.gene050767 | MS.gene51649 | 0.846987 | 1.54E-59 | -1.69E-46 |
MS.gene050770 | MS.gene51649 | 0.847449 | 1.15E-59 | -1.69E-46 |
MS.gene050772 | MS.gene51649 | 0.872991 | 2.08E-67 | -1.69E-46 |
MS.gene050950 | MS.gene51649 | 0.806908 | 6.55E-50 | -1.69E-46 |
MS.gene05100 | MS.gene51649 | 0.832395 | 9.69E-56 | -1.69E-46 |
MS.gene05101 | MS.gene51649 | 0.84105 | 6.01E-58 | -1.69E-46 |
MS.gene05105 | MS.gene51649 | 0.877472 | 6.11E-69 | -1.69E-46 |
MS.gene051228 | MS.gene51649 | 0.801355 | 9.36E-49 | -1.69E-46 |
MS.gene051387 | MS.gene51649 | 0.823983 | 1.03E-53 | -1.69E-46 |
MS.gene051551 | MS.gene51649 | 0.808162 | 3.55E-50 | -1.69E-46 |
MS.gene051582 | MS.gene51649 | 0.800888 | 1.17E-48 | -1.69E-46 |
MS.gene051666 | MS.gene51649 | 0.866049 | 3.79E-65 | -1.69E-46 |
MS.gene051692 | MS.gene51649 | 0.91399 | 3.24E-84 | -1.69E-46 |
MS.gene051810 | MS.gene51649 | 0.812976 | 3.23E-51 | -1.69E-46 |
MS.gene051858 | MS.gene51649 | 0.836918 | 7.06E-57 | -1.69E-46 |
MS.gene051877 | MS.gene51649 | 0.811444 | 6.98E-51 | -1.69E-46 |
MS.gene052078 | MS.gene51649 | 0.801271 | 9.74E-49 | -1.69E-46 |
MS.gene052253 | MS.gene51649 | 0.835327 | 1.79E-56 | -1.69E-46 |
MS.gene052271 | MS.gene51649 | 0.851663 | 7.66E-61 | -1.69E-46 |
MS.gene052310 | MS.gene51649 | 0.844713 | 6.38E-59 | -1.69E-46 |
MS.gene052322 | MS.gene51649 | 0.854353 | 1.30E-61 | -1.69E-46 |
MS.gene052340 | MS.gene51649 | 0.815628 | 8.39E-52 | -1.69E-46 |
MS.gene052414 | MS.gene51649 | 0.809397 | 1.93E-50 | -1.69E-46 |
MS.gene052421 | MS.gene51649 | 0.873772 | 1.13E-67 | -1.69E-46 |
MS.gene052481 | MS.gene51649 | 0.885472 | 7.90E-72 | -1.69E-46 |
MS.gene052484 | MS.gene51649 | 0.853976 | 1.67E-61 | -1.69E-46 |
MS.gene052485 | MS.gene51649 | 0.858028 | 1.09E-62 | -1.69E-46 |
MS.gene052501 | MS.gene51649 | 0.853446 | 2.38E-61 | -1.69E-46 |
MS.gene052503 | MS.gene51649 | 0.816533 | 5.27E-52 | -1.69E-46 |
MS.gene052505 | MS.gene51649 | 0.839548 | 1.48E-57 | -1.69E-46 |
MS.gene052615 | MS.gene51649 | 0.844244 | 8.53E-59 | -1.69E-46 |
MS.gene052823 | MS.gene51649 | 0.806457 | 8.15E-50 | -1.69E-46 |
MS.gene052825 | MS.gene51649 | 0.801336 | 9.45E-49 | -1.69E-46 |
MS.gene052982 | MS.gene51649 | 0.853412 | 2.43E-61 | -1.69E-46 |
MS.gene053103 | MS.gene51649 | 0.863586 | 2.24E-64 | -1.69E-46 |
MS.gene053104 | MS.gene51649 | 0.846604 | 1.96E-59 | -1.69E-46 |
MS.gene053207 | MS.gene51649 | 0.838607 | 2.60E-57 | -1.69E-46 |
MS.gene053209 | MS.gene51649 | 0.839307 | 1.71E-57 | -1.69E-46 |
MS.gene053213 | MS.gene51649 | 0.870934 | 1.00E-66 | -1.69E-46 |
MS.gene053286 | MS.gene51649 | 0.857347 | 1.74E-62 | -1.69E-46 |
MS.gene053322 | MS.gene51649 | 0.86303 | 3.33E-64 | -1.69E-46 |
MS.gene053436 | MS.gene51649 | 0.814947 | 1.19E-51 | -1.69E-46 |
MS.gene053449 | MS.gene51649 | 0.847835 | 8.99E-60 | -1.69E-46 |
MS.gene053574 | MS.gene51649 | 0.83993 | 1.18E-57 | -1.69E-46 |
MS.gene053632 | MS.gene51649 | 0.83175 | 1.40E-55 | -1.69E-46 |
MS.gene053813 | MS.gene51649 | 0.841459 | 4.69E-58 | -1.69E-46 |
MS.gene053916 | MS.gene51649 | 0.809204 | 2.12E-50 | -1.69E-46 |
MS.gene054376 | MS.gene51649 | 0.842826 | 2.04E-58 | -1.69E-46 |
MS.gene054408 | MS.gene51649 | 0.810471 | 1.13E-50 | -1.69E-46 |
MS.gene054600 | MS.gene51649 | 0.828558 | 8.41E-55 | -1.69E-46 |
MS.gene054642 | MS.gene51649 | 0.830716 | 2.51E-55 | -1.69E-46 |
MS.gene054802 | MS.gene51649 | 0.82429 | 8.75E-54 | -1.69E-46 |
MS.gene054803 | MS.gene51649 | 0.818437 | 1.96E-52 | -1.69E-46 |
MS.gene054804 | MS.gene51649 | 0.825727 | 4.00E-54 | -1.69E-46 |
MS.gene054927 | MS.gene51649 | 0.814444 | 1.54E-51 | -1.69E-46 |
MS.gene05505 | MS.gene51649 | 0.863829 | 1.88E-64 | -1.69E-46 |
MS.gene055116 | MS.gene51649 | 0.880694 | 4.44E-70 | -1.69E-46 |
MS.gene055206 | MS.gene51649 | 0.821763 | 3.40E-53 | -1.69E-46 |
MS.gene055212 | MS.gene51649 | 0.829916 | 3.94E-55 | -1.69E-46 |
MS.gene055277 | MS.gene51649 | 0.811568 | 6.56E-51 | -1.69E-46 |
MS.gene055289 | MS.gene51649 | 0.834334 | 3.18E-56 | -1.69E-46 |
MS.gene055362 | MS.gene51649 | 0.837433 | 5.21E-57 | -1.69E-46 |
MS.gene055397 | MS.gene51649 | 0.827752 | 1.31E-54 | -1.69E-46 |
MS.gene055412 | MS.gene51649 | 0.810525 | 1.10E-50 | -1.69E-46 |
MS.gene055499 | MS.gene51649 | 0.857516 | 1.55E-62 | -1.69E-46 |
MS.gene055502 | MS.gene51649 | 0.810054 | 1.39E-50 | -1.69E-46 |
MS.gene055647 | MS.gene51649 | 0.834198 | 3.44E-56 | -1.69E-46 |
MS.gene055722 | MS.gene51649 | 0.873847 | 1.07E-67 | -1.69E-46 |
MS.gene05592 | MS.gene51649 | 0.854973 | 8.61E-62 | -1.69E-46 |
MS.gene055941 | MS.gene51649 | 0.813113 | 3.02E-51 | -1.69E-46 |
MS.gene056083 | MS.gene51649 | 0.809606 | 1.74E-50 | -1.69E-46 |
MS.gene056191 | MS.gene51649 | 0.871777 | 5.27E-67 | -1.69E-46 |
MS.gene056374 | MS.gene51649 | 0.875037 | 4.22E-68 | -1.69E-46 |
MS.gene056407 | MS.gene51649 | 0.819291 | 1.25E-52 | -1.69E-46 |
MS.gene056410 | MS.gene51649 | 0.820046 | 8.43E-53 | -1.69E-46 |
MS.gene056511 | MS.gene51649 | 0.842815 | 2.05E-58 | -1.69E-46 |
MS.gene056609 | MS.gene51649 | 0.816275 | 6.02E-52 | -1.69E-46 |
MS.gene05664 | MS.gene51649 | 0.803073 | 4.15E-49 | -1.69E-46 |
MS.gene056657 | MS.gene51649 | 0.83168 | 1.45E-55 | -1.69E-46 |
MS.gene056897 | MS.gene51649 | 0.821765 | 3.39E-53 | -1.69E-46 |
MS.gene057011 | MS.gene51649 | 0.811542 | 6.65E-51 | -1.69E-46 |
MS.gene05702 | MS.gene51649 | 0.825944 | 3.56E-54 | -1.69E-46 |
MS.gene057048 | MS.gene51649 | 0.822227 | 2.65E-53 | -1.69E-46 |
MS.gene057076 | MS.gene51649 | 0.81596 | 7.07E-52 | -1.69E-46 |
MS.gene057123 | MS.gene51649 | 0.834129 | 3.58E-56 | -1.69E-46 |
MS.gene057124 | MS.gene51649 | 0.814433 | 1.54E-51 | -1.69E-46 |
MS.gene057129 | MS.gene51649 | 0.875984 | 2.00E-68 | -1.69E-46 |
MS.gene057146 | MS.gene51649 | 0.838635 | 2.56E-57 | -1.69E-46 |
MS.gene057196 | MS.gene51649 | 0.831195 | 1.92E-55 | -1.69E-46 |
MS.gene057295 | MS.gene51649 | 0.852545 | 4.30E-61 | -1.69E-46 |
MS.gene057331 | MS.gene51649 | 0.849849 | 2.48E-60 | -1.69E-46 |
MS.gene05733 | MS.gene51649 | 0.845703 | 3.44E-59 | -1.69E-46 |
MS.gene057416 | MS.gene51649 | 0.876838 | 1.02E-68 | -1.69E-46 |
MS.gene057734 | MS.gene51649 | 0.806956 | 6.39E-50 | -1.69E-46 |
MS.gene057749 | MS.gene51649 | 0.847966 | 8.28E-60 | -1.69E-46 |
MS.gene057823 | MS.gene51649 | 0.848517 | 5.83E-60 | -1.69E-46 |
MS.gene057856 | MS.gene51649 | 0.840483 | 8.46E-58 | -1.69E-46 |
MS.gene057926 | MS.gene51649 | 0.821129 | 4.76E-53 | -1.69E-46 |
MS.gene058006 | MS.gene51649 | 0.8521 | 5.76E-61 | -1.69E-46 |
MS.gene058019 | MS.gene51649 | 0.888834 | 4.15E-73 | -1.69E-46 |
MS.gene058233 | MS.gene51649 | 0.818242 | 2.17E-52 | -1.69E-46 |
MS.gene058293 | MS.gene51649 | 0.854675 | 1.05E-61 | -1.69E-46 |
MS.gene058323 | MS.gene51649 | 0.813742 | 2.19E-51 | -1.69E-46 |
MS.gene058376 | MS.gene51649 | 0.814752 | 1.31E-51 | -1.69E-46 |
MS.gene058419 | MS.gene51649 | 0.854606 | 1.10E-61 | -1.69E-46 |
MS.gene058444 | MS.gene51649 | 0.820444 | 6.84E-53 | -1.69E-46 |
MS.gene058544 | MS.gene51649 | 0.807668 | 4.52E-50 | -1.69E-46 |
MS.gene058660 | MS.gene51649 | 0.857094 | 2.06E-62 | -1.69E-46 |
MS.gene058723 | MS.gene51649 | 0.8246 | 7.39E-54 | -1.69E-46 |
MS.gene058787 | MS.gene51649 | 0.828972 | 6.68E-55 | -1.69E-46 |
MS.gene058838 | MS.gene51649 | 0.823042 | 1.71E-53 | -1.69E-46 |
MS.gene058928 | MS.gene51649 | 0.826138 | 3.20E-54 | -1.69E-46 |
MS.gene058995 | MS.gene51649 | 0.849141 | 3.91E-60 | -1.69E-46 |
MS.gene059022 | MS.gene51649 | 0.800662 | 1.30E-48 | -1.69E-46 |
MS.gene05907 | MS.gene51649 | 0.815961 | 7.07E-52 | -1.69E-46 |
MS.gene05913 | MS.gene51649 | 0.806134 | 9.53E-50 | -1.69E-46 |
MS.gene059141 | MS.gene51649 | 0.806172 | 9.36E-50 | -1.69E-46 |
MS.gene05934 | MS.gene51649 | 0.820971 | 5.17E-53 | -1.69E-46 |
MS.gene059455 | MS.gene51649 | 0.840183 | 1.01E-57 | -1.69E-46 |
MS.gene059536 | MS.gene51649 | 0.877304 | 6.99E-69 | -1.69E-46 |
MS.gene059597 | MS.gene51649 | 0.829511 | 4.94E-55 | -1.69E-46 |
MS.gene059676 | MS.gene51649 | 0.812393 | 4.34E-51 | -1.69E-46 |
MS.gene059677 | MS.gene51649 | 0.812239 | 4.68E-51 | -1.69E-46 |
MS.gene059688 | MS.gene51649 | 0.883756 | 3.43E-71 | -1.69E-46 |
MS.gene059692 | MS.gene51649 | 0.883602 | 3.90E-71 | -1.69E-46 |
MS.gene059695 | MS.gene51649 | 0.888119 | 7.83E-73 | -1.69E-46 |
MS.gene059718 | MS.gene51649 | 0.826054 | 3.35E-54 | -1.69E-46 |
MS.gene059902 | MS.gene51649 | 0.831954 | 1.25E-55 | -1.69E-46 |
MS.gene059960 | MS.gene51649 | 0.844409 | 7.70E-59 | -1.69E-46 |
MS.gene060193 | MS.gene51649 | 0.828619 | 8.13E-55 | -1.69E-46 |
MS.gene06037 | MS.gene51649 | 0.809038 | 2.30E-50 | -1.69E-46 |
MS.gene060403 | MS.gene51649 | 0.879667 | 1.03E-69 | -1.69E-46 |
MS.gene060469 | MS.gene51649 | 0.824352 | 8.46E-54 | -1.69E-46 |
MS.gene060482 | MS.gene51649 | 0.80889 | 2.48E-50 | -1.69E-46 |
MS.gene060804 | MS.gene51649 | 0.880219 | 6.57E-70 | -1.69E-46 |
MS.gene060818 | MS.gene51649 | 0.816772 | 4.65E-52 | -1.69E-46 |
MS.gene060835 | MS.gene51649 | 0.844908 | 5.65E-59 | -1.69E-46 |
MS.gene060837 | MS.gene51649 | 0.841767 | 3.89E-58 | -1.69E-46 |
MS.gene06092 | MS.gene51649 | 0.814921 | 1.20E-51 | -1.69E-46 |
MS.gene061041 | MS.gene51649 | 0.847126 | 1.41E-59 | -1.69E-46 |
MS.gene061049 | MS.gene51649 | 0.836155 | 1.10E-56 | -1.69E-46 |
MS.gene061150 | MS.gene51649 | 0.809467 | 1.87E-50 | -1.69E-46 |
MS.gene061200 | MS.gene51649 | 0.868358 | 6.93E-66 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51649.t1 | MTR_3g010000 | 91.358 | 162 | 2 | 1 | 1 | 162 | 1 | 150 | 1.43e-104 | 296 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51649.t1 | AT1G55670 | 70.303 | 165 | 41 | 3 | 1 | 162 | 1 | 160 | 1.38e-77 | 228 |
Find 23 sgRNAs with CRISPR-Local
Find 37 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTTATGATCCAAGTTTCTT+TGG | 0.281064 | 3.4:-4864042 | MS.gene51649:CDS |
TTGCTCAGGTAAGCCTTGTT+TGG | 0.325198 | 3.4:+4864224 | None:intergenic |
TATTGTTGCTTACTATATCT+TGG | 0.334380 | 3.4:-4864079 | MS.gene51649:CDS |
GTTAAAACCAACAGGATCAT+TGG | 0.338510 | 3.4:+4864137 | None:intergenic |
CCTTGGAAGGATAAGCTTGA+TGG | 0.391675 | 3.4:+4864423 | None:intergenic |
CAAGGCTTACCTGAGCAAAA+TGG | 0.416510 | 3.4:-4864219 | MS.gene51649:CDS |
TCAACAAGGTTAAAACCAAC+AGG | 0.475786 | 3.4:+4864129 | None:intergenic |
TTGTGAGAGGGTTGAAACCT+TGG | 0.480579 | 3.4:+4864406 | None:intergenic |
CTTAAATCCAATGATCCTGT+TGG | 0.489692 | 3.4:-4864144 | MS.gene51649:CDS |
AAATATCAACCAAAGAAACT+TGG | 0.505006 | 3.4:+4864033 | None:intergenic |
CTTAAGCTTATCACAAGTGA+AGG | 0.506695 | 3.4:+4864309 | None:intergenic |
CCATCAAGCTTATCCTTCCA+AGG | 0.510872 | 3.4:-4864423 | MS.gene51649:CDS |
AGCTGGTGACAAACGTGCTA+AGG | 0.525842 | 3.4:-4864181 | MS.gene51649:CDS |
TAATGCATGAGTTGATATCA+TGG | 0.550417 | 3.4:+4864485 | None:intergenic |
ATCTTGGCTACTTCTAGCAA+TGG | 0.561786 | 3.4:-4864063 | MS.gene51649:CDS |
AGAGAAAATGTAGCCAAACA+AGG | 0.605177 | 3.4:-4864237 | MS.gene51649:CDS |
AAGGTTTCAACCCTCTCACA+AGG | 0.615424 | 3.4:-4864404 | MS.gene51649:CDS |
CTTGTGATAAGCTTAAGCAC+TGG | 0.620138 | 3.4:-4864303 | MS.gene51649:CDS |
GAGAGGGTTGAAACCTTGGA+AGG | 0.621275 | 3.4:+4864410 | None:intergenic |
TTAAGCTTATCACAAGTGAA+GGG | 0.638403 | 3.4:+4864310 | None:intergenic |
ATGAGTTGATATCATGGATG+AGG | 0.640889 | 3.4:+4864491 | None:intergenic |
GGTGTGACACACTTTGAAGC+TGG | 0.654419 | 3.4:-4864198 | MS.gene51649:CDS |
CCCAAGCCAAAACATCAACA+AGG | 0.663918 | 3.4:+4864115 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTGTTGCTTACTATATCT+TGG | - | chr3.4:4864463-4864482 | MS.gene51649:CDS | 25.0% |
!! | TTTTAACCTTGTTGATGTTT+TGG | - | chr3.4:4864421-4864440 | MS.gene51649:CDS | 25.0% |
ACCTTCCTAAAAACAATGAA+AGG | + | chr3.4:4864265-4864284 | None:intergenic | 30.0% | |
TTAAGCTTATCACAAGTGAA+GGG | + | chr3.4:4864235-4864254 | None:intergenic | 30.0% | |
! | CTTGAAAATCTCTTTTTGCT+TGG | + | chr3.4:4864188-4864207 | None:intergenic | 30.0% |
!! | AGTTTTGTGTTTTTGAATGG+TGG | + | chr3.4:4864087-4864106 | None:intergenic | 30.0% |
!! | GTGAGTTTTGTGTTTTTGAA+TGG | + | chr3.4:4864090-4864109 | None:intergenic | 30.0% |
!! | TAATGCATGAGTTGATATCA+TGG | + | chr3.4:4864060-4864079 | None:intergenic | 30.0% |
AGAGAAAATGTAGCCAAACA+AGG | - | chr3.4:4864305-4864324 | MS.gene51649:CDS | 35.0% | |
CTTAAATCCAATGATCCTGT+TGG | - | chr3.4:4864398-4864417 | MS.gene51649:CDS | 35.0% | |
CTTAAGCTTATCACAAGTGA+AGG | + | chr3.4:4864236-4864255 | None:intergenic | 35.0% | |
GGTTATGATCCAAGTTTCTT+TGG | - | chr3.4:4864500-4864519 | MS.gene51649:CDS | 35.0% | |
GTTAAAACCAACAGGATCAT+TGG | + | chr3.4:4864408-4864427 | None:intergenic | 35.0% | |
TCAACAAGGTTAAAACCAAC+AGG | + | chr3.4:4864416-4864435 | None:intergenic | 35.0% | |
! | GTTTGGCTACATTTTCTCTT+TGG | + | chr3.4:4864304-4864323 | None:intergenic | 35.0% |
!! | ATGAGTTGATATCATGGATG+AGG | + | chr3.4:4864054-4864073 | None:intergenic | 35.0% |
!!! | ACTGGCCTTTCATTGTTTTT+AGG | - | chr3.4:4864257-4864276 | MS.gene51649:CDS | 35.0% |
!!! | GCCTTTCATTGTTTTTAGGA+AGG | - | chr3.4:4864261-4864280 | MS.gene51649:CDS | 35.0% |
ATCTTGGCTACTTCTAGCAA+TGG | - | chr3.4:4864479-4864498 | MS.gene51649:CDS | 40.0% | |
CTTGTGATAAGCTTAAGCAC+TGG | - | chr3.4:4864239-4864258 | MS.gene51649:CDS | 40.0% | |
! | ACTTTTGTTGACCTTGTGAG+AGG | + | chr3.4:4864152-4864171 | None:intergenic | 40.0% |
! | CTTTTGTTGACCTTGTGAGA+GGG | + | chr3.4:4864151-4864170 | None:intergenic | 40.0% |
!!! | ACCTTGTTGATGTTTTGGCT+TGG | - | chr3.4:4864426-4864445 | MS.gene51649:CDS | 40.0% |
!!! | CCTTGTTGATGTTTTGGCTT+GGG | - | chr3.4:4864427-4864446 | MS.gene51649:CDS | 40.0% |
!!! | CTTGTTGATGTTTTGGCTTG+GGG | - | chr3.4:4864428-4864447 | MS.gene51649:CDS | 40.0% |
AAGGTTTCAACCCTCTCACA+AGG | - | chr3.4:4864138-4864157 | MS.gene51649:CDS | 45.0% | |
CAAGGCTTACCTGAGCAAAA+TGG | - | chr3.4:4864323-4864342 | MS.gene51649:CDS | 45.0% | |
CCATCAAGCTTATCCTTCCA+AGG | - | chr3.4:4864119-4864138 | MS.gene51649:CDS | 45.0% | |
CCCAAGCCAAAACATCAACA+AGG | + | chr3.4:4864430-4864449 | None:intergenic | 45.0% | |
CCTTGGAAGGATAAGCTTGA+TGG | + | chr3.4:4864122-4864141 | None:intergenic | 45.0% | |
TTGTGAGAGGGTTGAAACCT+TGG | + | chr3.4:4864139-4864158 | None:intergenic | 45.0% | |
! | TGTGTCACACCATTTTGCTC+AGG | + | chr3.4:4864335-4864354 | None:intergenic | 45.0% |
!! | TTGCTCAGGTAAGCCTTGTT+TGG | + | chr3.4:4864321-4864340 | None:intergenic | 45.0% |
!!! | GTTTTGGCTTGGGGTTCTTT+AGG | - | chr3.4:4864437-4864456 | MS.gene51649:CDS | 45.0% |
AGCTGGTGACAAACGTGCTA+AGG | - | chr3.4:4864361-4864380 | MS.gene51649:CDS | 50.0% | |
GAGAGGGTTGAAACCTTGGA+AGG | + | chr3.4:4864135-4864154 | None:intergenic | 50.0% | |
!! | GGTGTGACACACTTTGAAGC+TGG | - | chr3.4:4864344-4864363 | MS.gene51649:CDS | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 4864038 | 4864526 | 4864038 | ID=MS.gene51649 |
chr3.4 | mRNA | 4864038 | 4864526 | 4864038 | ID=MS.gene51649.t1;Parent=MS.gene51649 |
chr3.4 | exon | 4864038 | 4864526 | 4864038 | ID=MS.gene51649.t1.exon1;Parent=MS.gene51649.t1 |
chr3.4 | CDS | 4864038 | 4864526 | 4864038 | ID=cds.MS.gene51649.t1;Parent=MS.gene51649.t1 |
Gene Sequence |
Protein sequence |