Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63820.t1 | XP_003617641.1 | 94.2 | 538 | 24 | 2 | 1 | 532 | 24 | 560 | 8.90E-270 | 939.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63820.t1 | Q8S9L5 | 59.5 | 548 | 206 | 4 | 1 | 533 | 1 | 547 | 7.1e-175 | 615.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63820.t1 | G7K8P7 | 94.2 | 538 | 24 | 2 | 1 | 532 | 24 | 560 | 6.4e-270 | 939.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene63820 | 0.809889 | 1.51E-50 | -1.69E-46 |
| MS.gene049153 | MS.gene63820 | 0.816905 | 4.35E-52 | -1.69E-46 |
| MS.gene049297 | MS.gene63820 | 0.830147 | 3.46E-55 | -1.69E-46 |
| MS.gene049346 | MS.gene63820 | 0.836991 | 6.77E-57 | -1.69E-46 |
| MS.gene049351 | MS.gene63820 | 0.873106 | 1.90E-67 | -1.69E-46 |
| MS.gene049389 | MS.gene63820 | 0.803898 | 2.80E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene63820 | 0.822332 | 2.51E-53 | -1.69E-46 |
| MS.gene049491 | MS.gene63820 | 0.823259 | 1.52E-53 | -1.69E-46 |
| MS.gene049661 | MS.gene63820 | 0.816895 | 4.37E-52 | -1.69E-46 |
| MS.gene049662 | MS.gene63820 | 0.819225 | 1.30E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene63820 | 0.807165 | 5.77E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene63820 | 0.85656 | 2.96E-62 | -1.69E-46 |
| MS.gene049910 | MS.gene63820 | 0.833694 | 4.60E-56 | -1.69E-46 |
| MS.gene049993 | MS.gene63820 | 0.820448 | 6.82E-53 | -1.69E-46 |
| MS.gene050076 | MS.gene63820 | 0.843374 | 1.46E-58 | -1.69E-46 |
| MS.gene050099 | MS.gene63820 | 0.871232 | 8.00E-67 | -1.69E-46 |
| MS.gene050231 | MS.gene63820 | 0.826199 | 3.09E-54 | -1.69E-46 |
| MS.gene050301 | MS.gene63820 | 0.908338 | 1.91E-81 | -1.69E-46 |
| MS.gene050397 | MS.gene63820 | 0.862047 | 6.68E-64 | -1.69E-46 |
| MS.gene050400 | MS.gene63820 | 0.80232 | 5.93E-49 | -1.69E-46 |
| MS.gene050404 | MS.gene63820 | 0.814079 | 1.85E-51 | -1.69E-46 |
| MS.gene050406 | MS.gene63820 | 0.858214 | 9.61E-63 | -1.69E-46 |
| MS.gene050426 | MS.gene63820 | -0.828452 | 8.92E-55 | -1.69E-46 |
| MS.gene050432 | MS.gene63820 | 0.840636 | 7.72E-58 | -1.69E-46 |
| MS.gene050464 | MS.gene63820 | 0.880261 | 6.35E-70 | -1.69E-46 |
| MS.gene050529 | MS.gene63820 | 0.877723 | 5.00E-69 | -1.69E-46 |
| MS.gene050558 | MS.gene63820 | 0.85264 | 4.04E-61 | -1.69E-46 |
| MS.gene050560 | MS.gene63820 | 0.804115 | 2.52E-49 | -1.69E-46 |
| MS.gene050642 | MS.gene63820 | 0.829355 | 5.39E-55 | -1.69E-46 |
| MS.gene050650 | MS.gene63820 | 0.810798 | 9.64E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene63820 | 0.866128 | 3.58E-65 | -1.69E-46 |
| MS.gene050783 | MS.gene63820 | 0.853959 | 1.69E-61 | -1.69E-46 |
| MS.gene050812 | MS.gene63820 | 0.87569 | 2.53E-68 | -1.69E-46 |
| MS.gene05101 | MS.gene63820 | 0.891154 | 5.14E-74 | -1.69E-46 |
| MS.gene05105 | MS.gene63820 | 0.831326 | 1.78E-55 | -1.69E-46 |
| MS.gene051171 | MS.gene63820 | 0.839751 | 1.31E-57 | -1.69E-46 |
| MS.gene051240 | MS.gene63820 | 0.829853 | 4.08E-55 | -1.69E-46 |
| MS.gene051242 | MS.gene63820 | 0.844458 | 7.47E-59 | -1.69E-46 |
| MS.gene051387 | MS.gene63820 | 0.830673 | 2.57E-55 | -1.69E-46 |
| MS.gene051471 | MS.gene63820 | 0.85887 | 6.12E-63 | -1.69E-46 |
| MS.gene051525 | MS.gene63820 | 0.876327 | 1.52E-68 | -1.69E-46 |
| MS.gene051582 | MS.gene63820 | 0.893714 | 4.86E-75 | -1.69E-46 |
| MS.gene051662 | MS.gene63820 | 0.817852 | 2.66E-52 | -1.69E-46 |
| MS.gene051663 | MS.gene63820 | 0.849281 | 3.58E-60 | -1.69E-46 |
| MS.gene051860 | MS.gene63820 | 0.846257 | 2.43E-59 | -1.69E-46 |
| MS.gene051877 | MS.gene63820 | 0.807676 | 4.50E-50 | -1.69E-46 |
| MS.gene051983 | MS.gene63820 | 0.833642 | 4.74E-56 | -1.69E-46 |
| MS.gene052011 | MS.gene63820 | -0.86736 | 1.45E-65 | -1.69E-46 |
| MS.gene052077 | MS.gene63820 | 0.833621 | 4.80E-56 | -1.69E-46 |
| MS.gene052078 | MS.gene63820 | 0.867299 | 1.52E-65 | -1.69E-46 |
| MS.gene052178 | MS.gene63820 | 0.826743 | 2.29E-54 | -1.69E-46 |
| MS.gene052188 | MS.gene63820 | 0.869962 | 2.09E-66 | -1.69E-46 |
| MS.gene052207 | MS.gene63820 | 0.811103 | 8.28E-51 | -1.69E-46 |
| MS.gene052253 | MS.gene63820 | 0.871788 | 5.23E-67 | -1.69E-46 |
| MS.gene052310 | MS.gene63820 | 0.884249 | 2.25E-71 | -1.69E-46 |
| MS.gene052322 | MS.gene63820 | 0.829863 | 4.06E-55 | -1.69E-46 |
| MS.gene052326 | MS.gene63820 | 0.855693 | 5.32E-62 | -1.69E-46 |
| MS.gene052340 | MS.gene63820 | 0.875113 | 3.98E-68 | -1.69E-46 |
| MS.gene052481 | MS.gene63820 | 0.836484 | 9.11E-57 | -1.69E-46 |
| MS.gene052485 | MS.gene63820 | 0.854822 | 9.53E-62 | -1.69E-46 |
| MS.gene052600 | MS.gene63820 | 0.814736 | 1.32E-51 | -1.69E-46 |
| MS.gene052982 | MS.gene63820 | 0.814884 | 1.23E-51 | -1.69E-46 |
| MS.gene053103 | MS.gene63820 | 0.802228 | 6.20E-49 | -1.69E-46 |
| MS.gene053107 | MS.gene63820 | 0.814618 | 1.41E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene63820 | 0.825798 | 3.85E-54 | -1.69E-46 |
| MS.gene053330 | MS.gene63820 | 0.848492 | 5.92E-60 | -1.69E-46 |
| MS.gene053557 | MS.gene63820 | 0.856722 | 2.65E-62 | -1.69E-46 |
| MS.gene053836 | MS.gene63820 | 0.895716 | 7.36E-76 | -1.69E-46 |
| MS.gene053907 | MS.gene63820 | 0.85064 | 1.49E-60 | -1.69E-46 |
| MS.gene053928 | MS.gene63820 | 0.874138 | 8.54E-68 | -1.69E-46 |
| MS.gene053971 | MS.gene63820 | 0.870408 | 1.49E-66 | -1.69E-46 |
| MS.gene054010 | MS.gene63820 | 0.813698 | 2.24E-51 | -1.69E-46 |
| MS.gene054011 | MS.gene63820 | 0.815425 | 9.30E-52 | -1.69E-46 |
| MS.gene054012 | MS.gene63820 | 0.820135 | 8.05E-53 | -1.69E-46 |
| MS.gene054013 | MS.gene63820 | 0.81638 | 5.70E-52 | -1.69E-46 |
| MS.gene054123 | MS.gene63820 | 0.846345 | 2.30E-59 | -1.69E-46 |
| MS.gene05412 | MS.gene63820 | 0.806337 | 8.64E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene63820 | 0.841799 | 3.82E-58 | -1.69E-46 |
| MS.gene054349 | MS.gene63820 | 0.824006 | 1.02E-53 | -1.69E-46 |
| MS.gene054376 | MS.gene63820 | 0.803065 | 4.16E-49 | -1.69E-46 |
| MS.gene054473 | MS.gene63820 | 0.837332 | 5.53E-57 | -1.69E-46 |
| MS.gene054556 | MS.gene63820 | 0.813697 | 2.24E-51 | -1.69E-46 |
| MS.gene05455 | MS.gene63820 | 0.858184 | 9.81E-63 | -1.69E-46 |
| MS.gene054719 | MS.gene63820 | 0.868172 | 7.95E-66 | -1.69E-46 |
| MS.gene054802 | MS.gene63820 | 0.819911 | 9.06E-53 | -1.69E-46 |
| MS.gene054803 | MS.gene63820 | 0.817068 | 3.99E-52 | -1.69E-46 |
| MS.gene054804 | MS.gene63820 | 0.818859 | 1.57E-52 | -1.69E-46 |
| MS.gene054942 | MS.gene63820 | 0.838013 | 3.70E-57 | -1.69E-46 |
| MS.gene054983 | MS.gene63820 | 0.835106 | 2.04E-56 | -1.69E-46 |
| MS.gene055116 | MS.gene63820 | 0.874497 | 6.45E-68 | -1.69E-46 |
| MS.gene055277 | MS.gene63820 | 0.882997 | 6.51E-71 | -1.69E-46 |
| MS.gene055369 | MS.gene63820 | 0.810934 | 9.01E-51 | -1.69E-46 |
| MS.gene055370 | MS.gene63820 | 0.830489 | 2.85E-55 | -1.69E-46 |
| MS.gene055390 | MS.gene63820 | 0.86467 | 1.03E-64 | -1.69E-46 |
| MS.gene055412 | MS.gene63820 | 0.815702 | 8.07E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene63820 | 0.884625 | 1.63E-71 | -1.69E-46 |
| MS.gene055428 | MS.gene63820 | 0.903169 | 4.58E-79 | -1.69E-46 |
| MS.gene055539 | MS.gene63820 | 0.808519 | 2.98E-50 | -1.69E-46 |
| MS.gene05553 | MS.gene63820 | 0.884373 | 2.03E-71 | -1.69E-46 |
| MS.gene055564 | MS.gene63820 | 0.819146 | 1.35E-52 | -1.69E-46 |
| MS.gene055604 | MS.gene63820 | 0.844523 | 7.17E-59 | -1.69E-46 |
| MS.gene055712 | MS.gene63820 | 0.834803 | 2.43E-56 | -1.69E-46 |
| MS.gene05594 | MS.gene63820 | 0.828401 | 9.18E-55 | -1.69E-46 |
| MS.gene055971 | MS.gene63820 | 0.846578 | 1.99E-59 | -1.69E-46 |
| MS.gene056191 | MS.gene63820 | 0.851497 | 8.54E-61 | -1.69E-46 |
| MS.gene056407 | MS.gene63820 | 0.901732 | 1.99E-78 | -1.69E-46 |
| MS.gene056410 | MS.gene63820 | 0.827331 | 1.66E-54 | -1.69E-46 |
| MS.gene056451 | MS.gene63820 | 0.858076 | 1.06E-62 | -1.69E-46 |
| MS.gene056452 | MS.gene63820 | 0.803783 | 2.96E-49 | -1.69E-46 |
| MS.gene056612 | MS.gene63820 | 0.883958 | 2.89E-71 | -1.69E-46 |
| MS.gene056659 | MS.gene63820 | 0.839398 | 1.62E-57 | -1.69E-46 |
| MS.gene056723 | MS.gene63820 | 0.847004 | 1.52E-59 | -1.69E-46 |
| MS.gene056796 | MS.gene63820 | 0.86983 | 2.31E-66 | -1.69E-46 |
| MS.gene056899 | MS.gene63820 | -0.83061 | 2.66E-55 | -1.69E-46 |
| MS.gene056902 | MS.gene63820 | 0.818811 | 1.61E-52 | -1.69E-46 |
| MS.gene056979 | MS.gene63820 | 0.82657 | 2.52E-54 | -1.69E-46 |
| MS.gene057011 | MS.gene63820 | 0.839326 | 1.69E-57 | -1.69E-46 |
| MS.gene05702 | MS.gene63820 | 0.88341 | 4.59E-71 | -1.69E-46 |
| MS.gene057121 | MS.gene63820 | 0.898286 | 6.16E-77 | -1.69E-46 |
| MS.gene057123 | MS.gene63820 | 0.811755 | 5.97E-51 | -1.69E-46 |
| MS.gene057124 | MS.gene63820 | 0.812338 | 4.46E-51 | -1.69E-46 |
| MS.gene057146 | MS.gene63820 | 0.818206 | 2.21E-52 | -1.69E-46 |
| MS.gene057196 | MS.gene63820 | 0.815945 | 7.13E-52 | -1.69E-46 |
| MS.gene057245 | MS.gene63820 | 0.840936 | 6.44E-58 | -1.69E-46 |
| MS.gene05733 | MS.gene63820 | 0.823885 | 1.09E-53 | -1.69E-46 |
| MS.gene057396 | MS.gene63820 | 0.827238 | 1.75E-54 | -1.69E-46 |
| MS.gene057439 | MS.gene63820 | 0.836163 | 1.10E-56 | -1.69E-46 |
| MS.gene057448 | MS.gene63820 | 0.822094 | 2.85E-53 | -1.69E-46 |
| MS.gene057449 | MS.gene63820 | 0.812097 | 5.03E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene63820 | 0.822839 | 1.91E-53 | -1.69E-46 |
| MS.gene057469 | MS.gene63820 | 0.822899 | 1.85E-53 | -1.69E-46 |
| MS.gene057476 | MS.gene63820 | 0.819597 | 1.07E-52 | -1.69E-46 |
| MS.gene057749 | MS.gene63820 | 0.867183 | 1.65E-65 | -1.69E-46 |
| MS.gene057823 | MS.gene63820 | 0.863257 | 2.83E-64 | -1.69E-46 |
| MS.gene057825 | MS.gene63820 | 0.831712 | 1.43E-55 | -1.69E-46 |
| MS.gene057888 | MS.gene63820 | 0.805297 | 1.43E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene63820 | 0.919508 | 4.13E-87 | -1.69E-46 |
| MS.gene058019 | MS.gene63820 | 0.811022 | 8.62E-51 | -1.69E-46 |
| MS.gene05811 | MS.gene63820 | 0.903319 | 3.92E-79 | -1.69E-46 |
| MS.gene058142 | MS.gene63820 | 0.895017 | 1.43E-75 | -1.69E-46 |
| MS.gene058233 | MS.gene63820 | 0.887279 | 1.64E-72 | -1.69E-46 |
| MS.gene058276 | MS.gene63820 | 0.892702 | 1.24E-74 | -1.69E-46 |
| MS.gene058293 | MS.gene63820 | 0.87806 | 3.81E-69 | -1.69E-46 |
| MS.gene058365 | MS.gene63820 | 0.839936 | 1.18E-57 | -1.69E-46 |
| MS.gene058444 | MS.gene63820 | 0.817025 | 4.08E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene63820 | 0.888707 | 4.65E-73 | -1.69E-46 |
| MS.gene058700 | MS.gene63820 | 0.823303 | 1.49E-53 | -1.69E-46 |
| MS.gene058710 | MS.gene63820 | 0.809596 | 1.75E-50 | -1.69E-46 |
| MS.gene058746 | MS.gene63820 | 0.829798 | 4.21E-55 | -1.69E-46 |
| MS.gene058749 | MS.gene63820 | 0.823889 | 1.09E-53 | -1.69E-46 |
| MS.gene058787 | MS.gene63820 | 0.808732 | 2.68E-50 | -1.69E-46 |
| MS.gene058833 | MS.gene63820 | 0.808706 | 2.71E-50 | -1.69E-46 |
| MS.gene058845 | MS.gene63820 | 0.815086 | 1.11E-51 | -1.69E-46 |
| MS.gene05886 | MS.gene63820 | 0.866388 | 2.96E-65 | -1.69E-46 |
| MS.gene058928 | MS.gene63820 | 0.804924 | 1.71E-49 | -1.69E-46 |
| MS.gene058993 | MS.gene63820 | 0.828946 | 6.78E-55 | -1.69E-46 |
| MS.gene059011 | MS.gene63820 | 0.813093 | 3.05E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene63820 | 0.920106 | 1.95E-87 | -1.69E-46 |
| MS.gene059141 | MS.gene63820 | 0.863852 | 1.85E-64 | -1.69E-46 |
| MS.gene059247 | MS.gene63820 | 0.829525 | 4.90E-55 | -1.69E-46 |
| MS.gene059285 | MS.gene63820 | 0.808029 | 3.79E-50 | -1.69E-46 |
| MS.gene059294 | MS.gene63820 | 0.811563 | 6.58E-51 | -1.69E-46 |
| MS.gene059326 | MS.gene63820 | 0.804734 | 1.87E-49 | -1.69E-46 |
| MS.gene059342 | MS.gene63820 | 0.80007 | 1.71E-48 | -1.69E-46 |
| MS.gene059420 | MS.gene63820 | 0.869279 | 3.49E-66 | -1.69E-46 |
| MS.gene059462 | MS.gene63820 | 0.810933 | 9.01E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene63820 | 0.860661 | 1.77E-63 | -1.69E-46 |
| MS.gene059536 | MS.gene63820 | 0.808458 | 3.07E-50 | -1.69E-46 |
| MS.gene059597 | MS.gene63820 | 0.873213 | 1.75E-67 | -1.69E-46 |
| MS.gene05959 | MS.gene63820 | 0.828701 | 7.77E-55 | -1.69E-46 |
| MS.gene059676 | MS.gene63820 | 0.879398 | 1.29E-69 | -1.69E-46 |
| MS.gene059688 | MS.gene63820 | 0.86746 | 1.35E-65 | -1.69E-46 |
| MS.gene059692 | MS.gene63820 | 0.874497 | 6.45E-68 | -1.69E-46 |
| MS.gene059695 | MS.gene63820 | 0.874674 | 5.62E-68 | -1.69E-46 |
| MS.gene05984 | MS.gene63820 | 0.876181 | 1.71E-68 | -1.69E-46 |
| MS.gene059894 | MS.gene63820 | 0.875509 | 2.91E-68 | -1.69E-46 |
| MS.gene059960 | MS.gene63820 | 0.824897 | 6.29E-54 | -1.69E-46 |
| MS.gene06037 | MS.gene63820 | 0.836569 | 8.67E-57 | -1.69E-46 |
| MS.gene060403 | MS.gene63820 | 0.843646 | 1.23E-58 | -1.69E-46 |
| MS.gene060407 | MS.gene63820 | 0.890965 | 6.11E-74 | -1.69E-46 |
| MS.gene06090 | MS.gene63820 | 0.864934 | 8.50E-65 | -1.69E-46 |
| MS.gene060986 | MS.gene63820 | 0.807891 | 4.05E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene63820 | 0.891193 | 4.97E-74 | -1.69E-46 |
| MS.gene061051 | MS.gene63820 | -0.813809 | 2.12E-51 | -1.69E-46 |
| MS.gene061114 | MS.gene63820 | -0.805585 | 1.24E-49 | -1.69E-46 |
| MS.gene061154 | MS.gene63820 | 0.837152 | 6.15E-57 | -1.69E-46 |
| MS.gene061159 | MS.gene63820 | 0.841203 | 5.48E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63820.t1 | MTR_5g093830 | 94.052 | 538 | 25 | 2 | 1 | 532 | 24 | 560 | 0.0 | 982 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63820.t1 | AT5G55220 | 59.273 | 550 | 204 | 6 | 1 | 533 | 1 | 547 | 0.0 | 658 |
Find 89 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTTCCTTGATTCTATAAT+TGG | 0.141614 | 5.3:+75985033 | MS.gene63820:CDS |
| TCAGAAATCCATTTAATTTC+TGG | 0.168583 | 5.3:-75984347 | None:intergenic |
| ATGTTGCACCAGAAATTAAA+TGG | 0.259733 | 5.3:+75984339 | MS.gene63820:CDS |
| ATTATTCTCTCGGATATCTT+AGG | 0.278137 | 5.3:+75984094 | MS.gene63820:CDS |
| GAGGTTGAAGGAGTTGAATT+TGG | 0.284849 | 5.3:-75982247 | None:intergenic |
| TCAATACCTGCATTTCTAAT+AGG | 0.299634 | 5.3:-75985979 | None:intergenic |
| GGTTACTGGAAGGGCTTTGC+AGG | 0.317659 | 5.3:+75984026 | MS.gene63820:intron |
| CTTGATTCTATAATTGGAAT+TGG | 0.335719 | 5.3:+75985039 | MS.gene63820:CDS |
| AAGATATCCGAGAGAATAAT+AGG | 0.339434 | 5.3:-75984091 | None:intergenic |
| TATATTAGATCAGATTTCTA+AGG | 0.345020 | 5.3:+75985651 | MS.gene63820:CDS |
| TAGCTGTTTGCTCTATCTCT+TGG | 0.360719 | 5.3:-75985606 | None:intergenic |
| AGTAACACATACTCTGGAAT+TGG | 0.365055 | 5.3:-75982415 | None:intergenic |
| AGTATTCTTGTTGGTTATGT+GGG | 0.365092 | 5.3:+75983460 | MS.gene63820:CDS |
| CCGTCTTCCTGCTGAATTGA+AGG | 0.365791 | 5.3:+75982374 | MS.gene63820:CDS |
| AGATATTCATTCACGGACTT+TGG | 0.385184 | 5.3:-75986174 | None:intergenic |
| TGGCAGTTGGTGACATATAT+AGG | 0.388142 | 5.3:+75986241 | MS.gene63820:CDS |
| TAACCAACAAGAATACTTTC+CGG | 0.396552 | 5.3:-75983454 | None:intergenic |
| GAACAAGGTAGACAGCTATA+TGG | 0.427214 | 5.3:+75985950 | MS.gene63820:CDS |
| AACCAACAAGAATACTTTCC+GGG | 0.427325 | 5.3:-75983453 | None:intergenic |
| TGGATGTACCACAGTGCAAC+AGG | 0.439789 | 5.3:+75985455 | MS.gene63820:CDS |
| AAGTATTCTTGTTGGTTATG+TGG | 0.444352 | 5.3:+75983459 | MS.gene63820:CDS |
| GTCCCGGAAAGTATTCTTGT+TGG | 0.452137 | 5.3:+75983451 | MS.gene63820:CDS |
| CGAACTTTGTAAACTCAACT+AGG | 0.456526 | 5.3:-75983071 | None:intergenic |
| TTACAGAGATTTACCAGAGC+TGG | 0.456759 | 5.3:+75985404 | MS.gene63820:CDS |
| GAAGAAGGAAGAGAGAAAGA+AGG | 0.469342 | 5.3:-75982192 | None:intergenic |
| TGTTGCACTGTGGTACATCC+AGG | 0.475737 | 5.3:-75985453 | None:intergenic |
| ATTGAAGGTCACTGAGACAA+AGG | 0.476315 | 5.3:+75982389 | MS.gene63820:CDS |
| CGAGGAACGTGTAAAGGAAC+AGG | 0.479197 | 5.3:+75986588 | MS.gene63820:CDS |
| GGAAGAAGATGAGAGGTTGA+AGG | 0.479741 | 5.3:-75982259 | None:intergenic |
| TGAATATCTTGAGCATCATA+AGG | 0.481148 | 5.3:+75986188 | MS.gene63820:CDS |
| AAGAAGGAAGAGAGAAAGAA+GGG | 0.486758 | 5.3:-75982191 | None:intergenic |
| TACCTGCATTTCTAATAGGC+TGG | 0.492031 | 5.3:-75985975 | None:intergenic |
| AAAACTAACTGAAGAGCAGC+TGG | 0.495940 | 5.3:+75986137 | MS.gene63820:CDS |
| ATCCAGCCTATTAGAAATGC+AGG | 0.500445 | 5.3:+75985973 | MS.gene63820:CDS |
| ATACGACGAGGAACGTGTAA+AGG | 0.502907 | 5.3:+75986582 | MS.gene63820:CDS |
| AGAGAATTTGAAGAAGAAGA+AGG | 0.510181 | 5.3:-75982207 | None:intergenic |
| ATTCCTTCTGCTGAAAGTAA+AGG | 0.519175 | 5.3:+75984863 | MS.gene63820:CDS |
| GAGGATACCTATTATTCTCT+CGG | 0.520497 | 5.3:+75984084 | MS.gene63820:CDS |
| TGTTACTGACAGAGGACTAC+AGG | 0.522402 | 5.3:+75984484 | MS.gene63820:CDS |
| AAGGAGCTAAGGTGCTAGAA+TGG | 0.522425 | 5.3:+75987049 | MS.gene63820:CDS |
| GCAATAGAATCATCCAGCTC+TGG | 0.523626 | 5.3:-75985417 | None:intergenic |
| AGTTCAACTGAAGAAGAAGA+TGG | 0.524580 | 5.3:-75982336 | None:intergenic |
| CTACCTTTACTTTCAGCAGA+AGG | 0.525053 | 5.3:-75984866 | None:intergenic |
| TCTATAATTGGAATTGGTCG+AGG | 0.525412 | 5.3:+75985045 | MS.gene63820:CDS |
| TCAGTGACCTTCAATTCAGC+AGG | 0.527113 | 5.3:-75982381 | None:intergenic |
| AGAAGGCGTTACAAGTCAGC+TGG | 0.527767 | 5.3:+75984449 | MS.gene63820:CDS |
| AAGAGATAGAGCAAACAGCT+AGG | 0.529180 | 5.3:+75985608 | MS.gene63820:CDS |
| CAATTCCAATTATAGAATCA+AGG | 0.531449 | 5.3:-75985038 | None:intergenic |
| GATATTTGATTCTTGATCAA+CGG | 0.532623 | 5.3:-75984834 | None:intergenic |
| TATATATGTCACCAACTGCC+AGG | 0.537928 | 5.3:-75986239 | None:intergenic |
| CAGGTACCTGGATTTCGTCC+TGG | 0.538561 | 5.3:+75983421 | MS.gene63820:intron |
| ATTGCTGATAAACTTATCCC+TGG | 0.539379 | 5.3:+75985435 | MS.gene63820:CDS |
| TGTTCATCAAACAAGGATTG+AGG | 0.541311 | 5.3:-75985932 | None:intergenic |
| ATGCTCAAGATATTCATTCA+CGG | 0.543020 | 5.3:-75986181 | None:intergenic |
| AAGGTTCAAGAAATACTAGA+AGG | 0.544740 | 5.3:+75987030 | MS.gene63820:intron |
| GCATGTGGAGGTACCATCAC+TGG | 0.547973 | 5.3:+75983023 | MS.gene63820:CDS |
| CAATCCTTGTTTGATGAACA+AGG | 0.549416 | 5.3:+75985935 | MS.gene63820:CDS |
| ATCAAACAGAACCTGGCAGT+TGG | 0.559239 | 5.3:+75986228 | MS.gene63820:CDS |
| AGAAATACTAGAAGGAGCTA+AGG | 0.563256 | 5.3:+75987038 | MS.gene63820:CDS |
| TTGACGTTTGAATTCAGCAA+TGG | 0.576175 | 5.3:-75986551 | None:intergenic |
| TGGAGAAGCTGAGACAGTGA+AGG | 0.576781 | 5.3:-75982316 | None:intergenic |
| ATATAGGCGTGAAAATATGC+AGG | 0.579562 | 5.3:+75986257 | MS.gene63820:CDS |
| AAATTTGATCAAACAGAACC+TGG | 0.587535 | 5.3:+75986221 | MS.gene63820:CDS |
| GTATTCTTGTTGGTTATGTG+GGG | 0.588330 | 5.3:+75983461 | MS.gene63820:CDS |
| CTACGATCGAATCAATATTG+AGG | 0.589271 | 5.3:+75983503 | MS.gene63820:CDS |
| AGAGATAGAGCAAACAGCTA+GGG | 0.589916 | 5.3:+75985609 | MS.gene63820:CDS |
| TCTACCTTGTTCATCAAACA+AGG | 0.591447 | 5.3:-75985939 | None:intergenic |
| ATGCGAGGACTGTTACGAAA+GGG | 0.596481 | 5.3:+75983047 | MS.gene63820:CDS |
| ATTATAGAATCAAGGAAACC+TGG | 0.599565 | 5.3:-75985030 | None:intergenic |
| GTTGAATGGAAGAAGATGAG+AGG | 0.601533 | 5.3:-75982266 | None:intergenic |
| TGAGTTTACAAAGTTCGCCA+AGG | 0.601858 | 5.3:+75983077 | MS.gene63820:CDS |
| CAGTCCTCGCATACCAGTGA+TGG | 0.604531 | 5.3:-75983036 | None:intergenic |
| TCTTTGATGATGTCTTCAGT+AGG | 0.610103 | 5.3:-75986517 | None:intergenic |
| TAAACTGAGCATGAACACCT+TGG | 0.610469 | 5.3:-75985122 | None:intergenic |
| TACTGAAGACATCATCAAAG+AGG | 0.612818 | 5.3:+75986519 | MS.gene63820:CDS |
| GGAGAAGCTGAGACAGTGAA+GGG | 0.614506 | 5.3:-75982315 | None:intergenic |
| GATGGTGAAATATTAGTACC+AGG | 0.615164 | 5.3:+75985012 | MS.gene63820:CDS |
| ACTTTCACACGCTGTAACAG+CGG | 0.616868 | 5.3:+75983531 | MS.gene63820:CDS |
| CTGAAAGTTGTTACTGACAG+AGG | 0.619184 | 5.3:+75984476 | MS.gene63820:CDS |
| CCTGCAGGTTAGATTGCATG+TGG | 0.627284 | 5.3:+75983008 | MS.gene63820:intron |
| CCTTCAATTCAGCAGGAAGA+CGG | 0.628013 | 5.3:-75982374 | None:intergenic |
| TATGCGAGGACTGTTACGAA+AGG | 0.650131 | 5.3:+75983046 | MS.gene63820:CDS |
| GTTGCACTGTGGTACATCCA+GGG | 0.654086 | 5.3:-75985452 | None:intergenic |
| CGATCGAATCAATATTGAGG+AGG | 0.656634 | 5.3:+75983506 | MS.gene63820:CDS |
| TGGAAGCAGGAAAATCTCCA+AGG | 0.665686 | 5.3:+75985105 | MS.gene63820:CDS |
| GCAGGTTAGATTGCATGTGG+AGG | 0.673127 | 5.3:+75983011 | MS.gene63820:intron |
| GGTACCATCACTGGTATGCG+AGG | 0.674391 | 5.3:+75983032 | MS.gene63820:CDS |
| AGTTCGAGTACAGAGCTCCA+TGG | 0.675973 | 5.3:-75982142 | None:intergenic |
| AAAAGTCACCTGTTGCACTG+TGG | 0.753690 | 5.3:-75985463 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTATTTGTTCTTATT+TGG | + | chr5.3:75986087-75986106 | MS.gene63820:intron | 10.0% |
| !!! | GTACATAATATTTTTTATTT+CGG | - | chr5.3:75986698-75986717 | None:intergenic | 10.0% |
| !!! | TATAATCAATTTTGTTTTAT+AGG | + | chr5.3:75984005-75984024 | MS.gene63820:intron | 10.0% |
| !! | AAAATACATATAAAAGGAAA+TGG | - | chr5.3:75984728-75984747 | None:intergenic | 15.0% |
| !! | AGTCTATTTAGTAAATTATT+TGG | + | chr5.3:75986453-75986472 | MS.gene63820:intron | 15.0% |
| !! | TATCAATCAATCTTTAAATT+AGG | - | chr5.3:75986989-75987008 | None:intergenic | 15.0% |
| !!! | TATATGGTAATATTTTGATA+TGG | + | chr5.3:75982488-75982507 | MS.gene63820:intron | 15.0% |
| !!! | TTCTAAATAATGGAATATAA+AGG | + | chr5.3:75986807-75986826 | MS.gene63820:intron | 15.0% |
| !!! | TTTTTTTTTCCTTTAAATGT+TGG | - | chr5.3:75986047-75986066 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTCTTTCTTTTTC+TGG | + | chr5.3:75985820-75985839 | MS.gene63820:intron | 15.0% |
| !! | AAAAAAAATACTATGCAAGT+AGG | - | chr5.3:75986756-75986775 | None:intergenic | 20.0% |
| !! | AAAGTTATTACTGAAAAATG+TGG | + | chr5.3:75983939-75983958 | MS.gene63820:intron | 20.0% |
| !! | ATACTCATAAAATAGAGAAA+AGG | + | chr5.3:75984203-75984222 | MS.gene63820:intron | 20.0% |
| !! | ATGATTTCTGATATCTAAAT+TGG | + | chr5.3:75983221-75983240 | MS.gene63820:intron | 20.0% |
| !! | GAGATGTATATTCTAAATAA+TGG | + | chr5.3:75986797-75986816 | MS.gene63820:intron | 20.0% |
| !! | TAGTAAACTTGTATATGATA+TGG | - | chr5.3:75983325-75983344 | None:intergenic | 20.0% |
| !! | TATATTAGATCAGATTTCTA+AGG | + | chr5.3:75985651-75985670 | MS.gene63820:CDS | 20.0% |
| !! | TTAAGAAACCACATTAAAAA+TGG | - | chr5.3:75984560-75984579 | None:intergenic | 20.0% |
| !! | TTTATGAGTATAGATAACTT+TGG | - | chr5.3:75984194-75984213 | None:intergenic | 20.0% |
| !!! | AATTTTGTTTTATAGGTTAC+TGG | + | chr5.3:75984012-75984031 | MS.gene63820:intron | 20.0% |
| !!! | ACATTTTTCAGTAATAACTT+TGG | - | chr5.3:75983940-75983959 | None:intergenic | 20.0% |
| !!! | AGTTACTAAATTTTCTGATA+TGG | + | chr5.3:75984062-75984081 | MS.gene63820:CDS | 20.0% |
| !!! | ATTATGTACCGTTTTTAAAA+TGG | + | chr5.3:75986709-75986728 | MS.gene63820:intron | 20.0% |
| !!! | ATTGTTCTTAGTTTGTATTT+GGG | - | chr5.3:75986842-75986861 | None:intergenic | 20.0% |
| !!! | TTTAAGTTTTCAAAGTAATC+TGG | + | chr5.3:75982797-75982816 | MS.gene63820:intron | 20.0% |
| !!! | TTTCTTTTCCATTTTTAATG+TGG | + | chr5.3:75984549-75984568 | MS.gene63820:intron | 20.0% |
| !!! | TTTTCTGAATGAATTTTGTT+TGG | - | chr5.3:75983167-75983186 | None:intergenic | 20.0% |
| ! | AAAACATTCATGAGGAAATA+TGG | - | chr5.3:75984664-75984683 | None:intergenic | 25.0% |
| ! | AAAACTATTATGCTGTATGT+TGG | - | chr5.3:75985199-75985218 | None:intergenic | 25.0% |
| ! | AAACTTGTATATGATATGGT+AGG | - | chr5.3:75983321-75983340 | None:intergenic | 25.0% |
| ! | AACAATTATACCATACACTA+TGG | - | chr5.3:75982876-75982895 | None:intergenic | 25.0% |
| ! | AACTTGTATATGATATGGTA+GGG | - | chr5.3:75983320-75983339 | None:intergenic | 25.0% |
| ! | AGCATAAATCAATAATACCT+TGG | - | chr5.3:75983097-75983116 | None:intergenic | 25.0% |
| ! | ATCTATTTGAACTTTCTTGA+AGG | + | chr5.3:75987011-75987030 | MS.gene63820:intron | 25.0% |
| ! | ATTTCTGATATCTAAATTGG+AGG | + | chr5.3:75983224-75983243 | MS.gene63820:intron | 25.0% |
| ! | CAAATACAAACTAAGAACAA+TGG | + | chr5.3:75986841-75986860 | MS.gene63820:intron | 25.0% |
| ! | CAATTCCAATTATAGAATCA+AGG | - | chr5.3:75985041-75985060 | None:intergenic | 25.0% |
| ! | CATCTGAAAAAGAATTTAGA+AGG | + | chr5.3:75984432-75984451 | MS.gene63820:CDS | 25.0% |
| ! | CTTGATTCTATAATTGGAAT+TGG | + | chr5.3:75985039-75985058 | MS.gene63820:CDS | 25.0% |
| ! | CTTTATCTCAGTTTGATATA+TGG | + | chr5.3:75982472-75982491 | MS.gene63820:intron | 25.0% |
| ! | GAAAACTTAAACTCTAAATC+AGG | - | chr5.3:75982788-75982807 | None:intergenic | 25.0% |
| ! | GACTAAATAAAACATTCATG+AGG | - | chr5.3:75984672-75984691 | None:intergenic | 25.0% |
| ! | GATATTTGATTCTTGATCAA+CGG | - | chr5.3:75984837-75984856 | None:intergenic | 25.0% |
| ! | GTAAAATAGTGAAGTGTAAT+TGG | + | chr5.3:75982510-75982529 | MS.gene63820:intron | 25.0% |
| ! | GTAAATATGATGAATATGAC+TGG | - | chr5.3:75983701-75983720 | None:intergenic | 25.0% |
| ! | TAAGGTAACATTACATCATT+AGG | + | chr5.3:75985669-75985688 | MS.gene63820:intron | 25.0% |
| ! | TCACATACATGTATAGTTTA+TGG | + | chr5.3:75985248-75985267 | MS.gene63820:intron | 25.0% |
| ! | TTCTATACAAATAGTTACTC+AGG | + | chr5.3:75986305-75986324 | MS.gene63820:intron | 25.0% |
| !! | ACTAAACAATTTTTGTCATC+AGG | - | chr5.3:75982749-75982768 | None:intergenic | 25.0% |
| !! | ATTCATATTGTCATTTCAGA+TGG | + | chr5.3:75985895-75985914 | MS.gene63820:intron | 25.0% |
| !! | ATTTGTGATAGCAGTTATTT+TGG | + | chr5.3:75984919-75984938 | MS.gene63820:intron | 25.0% |
| !! | CAGCATAATAGTTTTTCTTT+TGG | + | chr5.3:75985204-75985223 | MS.gene63820:intron | 25.0% |
| !! | TAACAATGTTTTACTTCAAC+AGG | + | chr5.3:75983402-75983421 | MS.gene63820:intron | 25.0% |
| !! | TACTAAATTTTCTGATATGG+AGG | + | chr5.3:75984065-75984084 | MS.gene63820:CDS | 25.0% |
| !! | TACTGAAAAATGTGGATTAT+TGG | + | chr5.3:75983947-75983966 | MS.gene63820:intron | 25.0% |
| !! | TATACACTCATATCATCTTT+TGG | - | chr5.3:75986359-75986378 | None:intergenic | 25.0% |
| !! | TCAGAAATCCATTTAATTTC+TGG | - | chr5.3:75984350-75984369 | None:intergenic | 25.0% |
| !!! | CATTGTTCTTAGTTTGTATT+TGG | - | chr5.3:75986843-75986862 | None:intergenic | 25.0% |
| !!! | GGTTGCATTTTTCAATTTTA+AGG | + | chr5.3:75986933-75986952 | MS.gene63820:intron | 25.0% |
| !!! | TTAGCTTTTTAGACAATGTT+GGG | + | chr5.3:75983607-75983626 | MS.gene63820:intron | 25.0% |
| !!! | TTGTGCGTATTTAATTTTAC+AGG | + | chr5.3:75984775-75984794 | MS.gene63820:intron | 25.0% |
| !!! | TTTGTGATAGCAGTTATTTT+GGG | + | chr5.3:75984920-75984939 | MS.gene63820:intron | 25.0% |
| AAACATCATACTATGTATGC+AGG | + | chr5.3:75984970-75984989 | MS.gene63820:intron | 30.0% | |
| AAATTTGATCAAACAGAACC+TGG | + | chr5.3:75986221-75986240 | MS.gene63820:CDS | 30.0% | |
| AAGATATCCGAGAGAATAAT+AGG | - | chr5.3:75984094-75984113 | None:intergenic | 30.0% | |
| AAGGTTCAAGAAATACTAGA+AGG | + | chr5.3:75987030-75987049 | MS.gene63820:intron | 30.0% | |
| AATAACTTTGGACAAACGAT+TGG | - | chr5.3:75983928-75983947 | None:intergenic | 30.0% | |
| ACTATACAATCCATAGTGTA+TGG | + | chr5.3:75982863-75982882 | MS.gene63820:intron | 30.0% | |
| ACTTGGATTCCAACATTTAA+AGG | + | chr5.3:75986035-75986054 | MS.gene63820:intron | 30.0% | |
| AGAAAAAGTAACACATACTC+TGG | - | chr5.3:75982424-75982443 | None:intergenic | 30.0% | |
| AGAGAATTTGAAGAAGAAGA+AGG | - | chr5.3:75982210-75982229 | None:intergenic | 30.0% | |
| AGCAAGCAAATTCAAAAGTA+AGG | - | chr5.3:75986620-75986639 | None:intergenic | 30.0% | |
| ATAACAGACTCAAAAAAAGG+AGG | - | chr5.3:75984170-75984189 | None:intergenic | 30.0% | |
| ATACATGTATGTGAACAAGT+TGG | - | chr5.3:75985242-75985261 | None:intergenic | 30.0% | |
| ATAGATTCTGAACACTTGTT+TGG | - | chr5.3:75984641-75984660 | None:intergenic | 30.0% | |
| ATATATTTATGCTATCCTGC+AGG | + | chr5.3:75982993-75983012 | MS.gene63820:intron | 30.0% | |
| ATGAAAAAGAGAAGGTTGAA+TGG | - | chr5.3:75982283-75982302 | None:intergenic | 30.0% | |
| ATGCTCAAGATATTCATTCA+CGG | - | chr5.3:75986184-75986203 | None:intergenic | 30.0% | |
| ATGTTGCACCAGAAATTAAA+TGG | + | chr5.3:75984339-75984358 | MS.gene63820:CDS | 30.0% | |
| ATTATAGAATCAAGGAAACC+TGG | - | chr5.3:75985033-75985052 | None:intergenic | 30.0% | |
| ATTATTCTCTCGGATATCTT+AGG | + | chr5.3:75984094-75984113 | MS.gene63820:CDS | 30.0% | |
| CATATCGAAAAAATGTTGTG+AGG | - | chr5.3:75985741-75985760 | None:intergenic | 30.0% | |
| CGTACTATAAAGATGTTTGT+TGG | + | chr5.3:75983734-75983753 | MS.gene63820:intron | 30.0% | |
| CTTAAGAGAAGATAATGCTA+AGG | + | chr5.3:75982955-75982974 | MS.gene63820:intron | 30.0% | |
| CTTTATCCAATCAGAAAACT+TGG | + | chr5.3:75986018-75986037 | MS.gene63820:intron | 30.0% | |
| GAATTGTGAGTAAAATTCTC+CGG | + | chr5.3:75985544-75985563 | MS.gene63820:intron | 30.0% | |
| GGTATAACAGACTCAAAAAA+AGG | - | chr5.3:75984173-75984192 | None:intergenic | 30.0% | |
| GGTTTCCTTGATTCTATAAT+TGG | + | chr5.3:75985033-75985052 | MS.gene63820:CDS | 30.0% | |
| GTATGGTATAATTGTTTCCA+TGG | + | chr5.3:75982880-75982899 | MS.gene63820:intron | 30.0% | |
| TAACCAACAAGAATACTTTC+CGG | - | chr5.3:75983457-75983476 | None:intergenic | 30.0% | |
| TCAATACCTGCATTTCTAAT+AGG | - | chr5.3:75985982-75986001 | None:intergenic | 30.0% | |
| TGAATATCTTGAGCATCATA+AGG | + | chr5.3:75986188-75986207 | MS.gene63820:CDS | 30.0% | |
| TGATGCATACAAAAACTTGA+AGG | + | chr5.3:75984370-75984389 | MS.gene63820:CDS | 30.0% | |
| ! | AAGTATTCTTGTTGGTTATG+TGG | + | chr5.3:75983459-75983478 | MS.gene63820:CDS | 30.0% |
| ! | AGTATTCTTGTTGGTTATGT+GGG | + | chr5.3:75983460-75983479 | MS.gene63820:CDS | 30.0% |
| ! | CAAAAGTCACTTCATTTTGT+AGG | + | chr5.3:75986897-75986916 | MS.gene63820:intron | 30.0% |
| ! | CAGCATGTTTTCTTAAAAGA+GGG | - | chr5.3:75983353-75983372 | None:intergenic | 30.0% |
| ! | CTCACACAATTTTACTATCA+TGG | - | chr5.3:75983816-75983835 | None:intergenic | 30.0% |
| ! | TCATATCATCTTTTGGCAAT+GGG | - | chr5.3:75986352-75986371 | None:intergenic | 30.0% |
| ! | TGTTTTATAGGTTACTGGAA+GGG | + | chr5.3:75984017-75984036 | MS.gene63820:intron | 30.0% |
| !! | AGGATTCAATTTTGATACAG+AGG | + | chr5.3:75984990-75985009 | MS.gene63820:intron | 30.0% |
| !! | GCGTATTTAATTTTACAGGT+CGG | + | chr5.3:75984779-75984798 | MS.gene63820:intron | 30.0% |
| !! | TACACGGTCCATTTTAAAAA+CGG | - | chr5.3:75986720-75986739 | None:intergenic | 30.0% |
| !! | TTCAATTTTGATACAGAGGA+TGG | + | chr5.3:75984994-75985013 | MS.gene63820:CDS | 30.0% |
| !! | TTGTGATAGCAGTTATTTTG+GGG | + | chr5.3:75984921-75984940 | MS.gene63820:intron | 30.0% |
| !! | TTGTTTTATAGGTTACTGGA+AGG | + | chr5.3:75984016-75984035 | MS.gene63820:intron | 30.0% |
| !!! | GTTAGCTTTTTAGACAATGT+TGG | + | chr5.3:75983606-75983625 | MS.gene63820:intron | 30.0% |
| !!! | TCTCTTTTTGCTGTTTCAAA+AGG | - | chr5.3:75986781-75986800 | None:intergenic | 30.0% |
| !!! | TGAATGTTTTATTTAGTCGC+AGG | + | chr5.3:75984674-75984693 | MS.gene63820:intron | 30.0% |
| !!! | TTTTTAAAATGGACCGTGTA+GGG | + | chr5.3:75986720-75986739 | MS.gene63820:intron | 30.0% |
| AACCAACAAGAATACTTTCC+GGG | - | chr5.3:75983456-75983475 | None:intergenic | 35.0% | |
| AAGAAGGAAGAGAGAAAGAA+GGG | - | chr5.3:75982194-75982213 | None:intergenic | 35.0% | |
| AAGATACCGTGTAATCCTTT+CGG | - | chr5.3:75986871-75986890 | None:intergenic | 35.0% | |
| AATGAAATGCCTTTGACATG+AGG | + | chr5.3:75983847-75983866 | MS.gene63820:intron | 35.0% | |
| ACTATGACAATTGCACTTGA+GGG | - | chr5.3:75985492-75985511 | None:intergenic | 35.0% | |
| AGAAATACTAGAAGGAGCTA+AGG | + | chr5.3:75987038-75987057 | MS.gene63820:CDS | 35.0% | |
| AGATATTCATTCACGGACTT+TGG | - | chr5.3:75986177-75986196 | None:intergenic | 35.0% | |
| AGTTCAACTGAAGAAGAAGA+TGG | - | chr5.3:75982339-75982358 | None:intergenic | 35.0% | |
| ATATAGGCGTGAAAATATGC+AGG | + | chr5.3:75986257-75986276 | MS.gene63820:CDS | 35.0% | |
| ATGTTTCAGGAAAAACAAGG+GGG | - | chr5.3:75985086-75985105 | None:intergenic | 35.0% | |
| ATTCCTTCTGCTGAAAGTAA+AGG | + | chr5.3:75984863-75984882 | MS.gene63820:CDS | 35.0% | |
| ATTGCTGATAAACTTATCCC+TGG | + | chr5.3:75985435-75985454 | MS.gene63820:CDS | 35.0% | |
| CATACACAAACACAGATCAA+AGG | - | chr5.3:75985302-75985321 | None:intergenic | 35.0% | |
| CATGTTTCAGGAAAAACAAG+GGG | - | chr5.3:75985087-75985106 | None:intergenic | 35.0% | |
| CCATGTTTCAGGAAAAACAA+GGG | - | chr5.3:75985088-75985107 | None:intergenic | 35.0% | |
| CGAACTTTGTAAACTCAACT+AGG | - | chr5.3:75983074-75983093 | None:intergenic | 35.0% | |
| CTAACAATAAGTCTTTGACC+TGG | - | chr5.3:75985579-75985598 | None:intergenic | 35.0% | |
| CTACGATCGAATCAATATTG+AGG | + | chr5.3:75983503-75983522 | MS.gene63820:CDS | 35.0% | |
| CTCAATCAGATTAAACTGAG+TGG | - | chr5.3:75986386-75986405 | None:intergenic | 35.0% | |
| GAAACACATCATTATGCACA+AGG | - | chr5.3:75985777-75985796 | None:intergenic | 35.0% | |
| GAAGCTAGAGAACAACATAT+AGG | - | chr5.3:75986498-75986517 | None:intergenic | 35.0% | |
| GAAGTGTGATGAAAAAGAGA+AGG | - | chr5.3:75982291-75982310 | None:intergenic | 35.0% | |
| GAGGATACCTATTATTCTCT+CGG | + | chr5.3:75984084-75984103 | MS.gene63820:CDS | 35.0% | |
| GATGGTGAAATATTAGTACC+AGG | + | chr5.3:75985012-75985031 | MS.gene63820:CDS | 35.0% | |
| GCTTCTCTTTCATTTCTAAC+AGG | + | chr5.3:75985362-75985381 | MS.gene63820:intron | 35.0% | |
| GGGGAGTAAAAATGTTCAAA+AGG | + | chr5.3:75983480-75983499 | MS.gene63820:CDS | 35.0% | |
| TAACATCAAGAAAGAACGCA+AGG | - | chr5.3:75983590-75983609 | None:intergenic | 35.0% | |
| TACACTCATAACATTCTTCC+AGG | - | chr5.3:75982701-75982720 | None:intergenic | 35.0% | |
| TACTATGACAATTGCACTTG+AGG | - | chr5.3:75985493-75985512 | None:intergenic | 35.0% | |
| TACTGAAGACATCATCAAAG+AGG | + | chr5.3:75986519-75986538 | MS.gene63820:CDS | 35.0% | |
| TATCATGGACATCGATAATG+TGG | - | chr5.3:75983801-75983820 | None:intergenic | 35.0% | |
| TCAAAAACAAGAATACGACG+AGG | + | chr5.3:75986570-75986589 | MS.gene63820:CDS | 35.0% | |
| TCCATGTTTCAGGAAAAACA+AGG | - | chr5.3:75985089-75985108 | None:intergenic | 35.0% | |
| TCTACCTTGTTCATCAAACA+AGG | - | chr5.3:75985942-75985961 | None:intergenic | 35.0% | |
| TCTATAATTGGAATTGGTCG+AGG | + | chr5.3:75985045-75985064 | MS.gene63820:CDS | 35.0% | |
| TCTCTTCCATGCAAAATTTG+AGG | + | chr5.3:75983264-75983283 | MS.gene63820:intron | 35.0% | |
| TGCTTCCGTTAAAGTTCAAT+GGG | - | chr5.3:75985333-75985352 | None:intergenic | 35.0% | |
| TGTTCATCAAACAAGGATTG+AGG | - | chr5.3:75985935-75985954 | None:intergenic | 35.0% | |
| TTGACGTTTGAATTCAGCAA+TGG | - | chr5.3:75986554-75986573 | None:intergenic | 35.0% | |
| TTGCTTCCGTTAAAGTTCAA+TGG | - | chr5.3:75985334-75985353 | None:intergenic | 35.0% | |
| TTGTGAGGTACATTCTAATC+TGG | - | chr5.3:75985726-75985745 | None:intergenic | 35.0% | |
| TTTGTAGGCAATGGTAGTTT+AGG | + | chr5.3:75986912-75986931 | MS.gene63820:intron | 35.0% | |
| ! | CAATCCTTGTTTGATGAACA+AGG | + | chr5.3:75985935-75985954 | MS.gene63820:CDS | 35.0% |
| ! | CAGTAACCTCAAATTTTGCA+TGG | - | chr5.3:75983273-75983292 | None:intergenic | 35.0% |
| ! | CTCATATCATCTTTTGGCAA+TGG | - | chr5.3:75986353-75986372 | None:intergenic | 35.0% |
| ! | GCAGCATGTTTTCTTAAAAG+AGG | - | chr5.3:75983354-75983373 | None:intergenic | 35.0% |
| ! | GTATTCTTGTTGGTTATGTG+GGG | + | chr5.3:75983461-75983480 | MS.gene63820:CDS | 35.0% |
| ! | TCACTTCATTTTGTAGGCAA+TGG | + | chr5.3:75986903-75986922 | MS.gene63820:intron | 35.0% |
| ! | TGGAATCCAAGTTTTCTGAT+TGG | - | chr5.3:75986027-75986046 | None:intergenic | 35.0% |
| !! | AGTAACACATACTCTGGAAT+TGG | - | chr5.3:75982418-75982437 | None:intergenic | 35.0% |
| !! | ATGCAGGTATTGATTCAAGT+AGG | + | chr5.3:75985989-75986008 | MS.gene63820:intron | 35.0% |
| !! | TCATGTCAAAGGCATTTCAT+TGG | - | chr5.3:75983848-75983867 | None:intergenic | 35.0% |
| !! | TCTTTGATGATGTCTTCAGT+AGG | - | chr5.3:75986520-75986539 | None:intergenic | 35.0% |
| !!! | CTCGCTTATTTCACTTTTTC+AGG | + | chr5.3:75984300-75984319 | MS.gene63820:intron | 35.0% |
| !!! | GTTTTTAAAATGGACCGTGT+AGG | + | chr5.3:75986719-75986738 | MS.gene63820:intron | 35.0% |
| AACAGCGGTATGTTGTAATC+TGG | + | chr5.3:75983546-75983565 | MS.gene63820:intron | 40.0% | |
| AAGAACAATGGCTATCCGAA+AGG | + | chr5.3:75986853-75986872 | MS.gene63820:intron | 40.0% | |
| AAGAGATAGAGCAAACAGCT+AGG | + | chr5.3:75985608-75985627 | MS.gene63820:CDS | 40.0% | |
| AATTGGACCTGAAATTTCGC+CGG | + | chr5.3:75982527-75982546 | MS.gene63820:intron | 40.0% | |
| ACAAGTGTCAGTTAGTTGAC+TGG | - | chr5.3:75984529-75984548 | None:intergenic | 40.0% | |
| ACGAGCCCATTGAACTTTAA+CGG | + | chr5.3:75985325-75985344 | MS.gene63820:intron | 40.0% | |
| AGAGATAGAGCAAACAGCTA+GGG | + | chr5.3:75985609-75985628 | MS.gene63820:CDS | 40.0% | |
| ATCCAGCCTATTAGAAATGC+AGG | + | chr5.3:75985973-75985992 | MS.gene63820:CDS | 40.0% | |
| ATCTGCAGTGTAGAAGTCAT+CGG | - | chr5.3:75984261-75984280 | None:intergenic | 40.0% | |
| ATTGAAGGTCACTGAGACAA+AGG | + | chr5.3:75982389-75982408 | MS.gene63820:CDS | 40.0% | |
| CATGAGTGATTCCTTGATCA+TGG | + | chr5.3:75983657-75983676 | MS.gene63820:intron | 40.0% | |
| CATGATCAAGGAATCACTCA+TGG | - | chr5.3:75983659-75983678 | None:intergenic | 40.0% | |
| CGATCGAATCAATATTGAGG+AGG | + | chr5.3:75983506-75983525 | MS.gene63820:CDS | 40.0% | |
| CTACCTTTACTTTCAGCAGA+AGG | - | chr5.3:75984869-75984888 | None:intergenic | 40.0% | |
| CTGAAAGTTGTTACTGACAG+AGG | + | chr5.3:75984476-75984495 | MS.gene63820:CDS | 40.0% | |
| CTGTTTACTAGCCATGATCA+AGG | - | chr5.3:75983671-75983690 | None:intergenic | 40.0% | |
| CTTCTGCTGAAAGTAAAGGT+AGG | + | chr5.3:75984867-75984886 | MS.gene63820:intron | 40.0% | |
| GAACAAGGTAGACAGCTATA+TGG | + | chr5.3:75985950-75985969 | MS.gene63820:CDS | 40.0% | |
| GAAGAAGGAAGAGAGAAAGA+AGG | - | chr5.3:75982195-75982214 | None:intergenic | 40.0% | |
| GAGGTTGAAGGAGTTGAATT+TGG | - | chr5.3:75982250-75982269 | None:intergenic | 40.0% | |
| GTAACAAGTCCTCATGTCAA+AGG | - | chr5.3:75983859-75983878 | None:intergenic | 40.0% | |
| GTTGAATGGAAGAAGATGAG+AGG | - | chr5.3:75982269-75982288 | None:intergenic | 40.0% | |
| TAAACTGAGCATGAACACCT+TGG | - | chr5.3:75985125-75985144 | None:intergenic | 40.0% | |
| TACCTGCATTTCTAATAGGC+TGG | - | chr5.3:75985978-75985997 | None:intergenic | 40.0% | |
| TAGCTGTTTGCTCTATCTCT+TGG | - | chr5.3:75985609-75985628 | None:intergenic | 40.0% | |
| TAGGTGATGTGCTTGCAAAA+TGG | + | chr5.3:75984886-75984905 | MS.gene63820:intron | 40.0% | |
| TATATATGTCACCAACTGCC+AGG | - | chr5.3:75986242-75986261 | None:intergenic | 40.0% | |
| TGAGTTTACAAAGTTCGCCA+AGG | + | chr5.3:75983077-75983096 | MS.gene63820:CDS | 40.0% | |
| TGGACATCGATAATGTGGAA+TGG | - | chr5.3:75983796-75983815 | None:intergenic | 40.0% | |
| TGGATTTCGTCCTGGAAAAA+AGG | + | chr5.3:75983429-75983448 | MS.gene63820:CDS | 40.0% | |
| TTACAGAGATTTACCAGAGC+TGG | + | chr5.3:75985404-75985423 | MS.gene63820:CDS | 40.0% | |
| TTGTGTTAGTGCAATGTGCA+TGG | - | chr5.3:75983761-75983780 | None:intergenic | 40.0% | |
| TTTGACCTGGAAATTCATGC+CGG | - | chr5.3:75985566-75985585 | None:intergenic | 40.0% | |
| ! | GTTTTACTTCAACAGGTACC+TGG | + | chr5.3:75983409-75983428 | MS.gene63820:intron | 40.0% |
| ! | TTGTTTCCATGGAAGAGTGT+AGG | + | chr5.3:75982891-75982910 | MS.gene63820:intron | 40.0% |
| ! | TTTTCCTGAAACATGGAAGC+AGG | + | chr5.3:75985092-75985111 | MS.gene63820:CDS | 40.0% |
| ! | TTTTCCTGCTTCCATGTTTC+AGG | - | chr5.3:75985099-75985118 | None:intergenic | 40.0% |
| !! | AGGAAGTGTTTATCCCTACA+CGG | - | chr5.3:75986736-75986755 | None:intergenic | 40.0% |
| !! | TGGCAGTTGGTGACATATAT+AGG | + | chr5.3:75986241-75986260 | MS.gene63820:CDS | 40.0% |
| !!! | CCCTTGTTTTTCCTGAAACA+TGG | + | chr5.3:75985085-75985104 | MS.gene63820:CDS | 40.0% |
| !!! | TTTTTTCCAGGACGAAATCC+AGG | - | chr5.3:75983430-75983449 | None:intergenic | 40.0% |
| AAAAGTCACCTGTTGCACTG+TGG | - | chr5.3:75985466-75985485 | None:intergenic | 45.0% | |
| ACATCTAGTGTAGCTAGTCC+TGG | + | chr5.3:75982680-75982699 | MS.gene63820:intron | 45.0% | |
| ACTTTCACACGCTGTAACAG+CGG | + | chr5.3:75983531-75983550 | MS.gene63820:CDS | 45.0% | |
| ATACGACGAGGAACGTGTAA+AGG | + | chr5.3:75986582-75986601 | MS.gene63820:CDS | 45.0% | |
| ATCAAACAGAACCTGGCAGT+TGG | + | chr5.3:75986228-75986247 | MS.gene63820:CDS | 45.0% | |
| ATGCGAGGACTGTTACGAAA+GGG | + | chr5.3:75983047-75983066 | MS.gene63820:CDS | 45.0% | |
| ATTCTCCGGCATGAATTTCC+AGG | + | chr5.3:75985558-75985577 | MS.gene63820:intron | 45.0% | |
| CCTTCAATTCAGCAGGAAGA+CGG | - | chr5.3:75982377-75982396 | None:intergenic | 45.0% | |
| CGTTATAAAACGACTCGCAG+AGG | - | chr5.3:75984605-75984624 | None:intergenic | 45.0% | |
| GCAATAGAATCATCCAGCTC+TGG | - | chr5.3:75985420-75985439 | None:intergenic | 45.0% | |
| GCATGGAAGAGAATGTAGAG+TGG | - | chr5.3:75983256-75983275 | None:intergenic | 45.0% | |
| GGAAGAAGATGAGAGGTTGA+AGG | - | chr5.3:75982262-75982281 | None:intergenic | 45.0% | |
| GGCTATCCGAAAGGATTACA+CGG | + | chr5.3:75986862-75986881 | MS.gene63820:intron | 45.0% | |
| TATGCGAGGACTGTTACGAA+AGG | + | chr5.3:75983046-75983065 | MS.gene63820:CDS | 45.0% | |
| TCAGTGACCTTCAATTCAGC+AGG | - | chr5.3:75982384-75982403 | None:intergenic | 45.0% | |
| TGGAAGCAGGAAAATCTCCA+AGG | + | chr5.3:75985105-75985124 | MS.gene63820:CDS | 45.0% | |
| TGTTACTGACAGAGGACTAC+AGG | + | chr5.3:75984484-75984503 | MS.gene63820:CDS | 45.0% | |
| ! | AAGGAGCTAAGGTGCTAGAA+TGG | + | chr5.3:75987049-75987068 | MS.gene63820:CDS | 45.0% |
| !! | CAGGAAGACGGTCATTTTCT+GGG | - | chr5.3:75982365-75982384 | None:intergenic | 45.0% |
| !! | GTCCCGGAAAGTATTCTTGT+TGG | + | chr5.3:75983451-75983470 | MS.gene63820:CDS | 45.0% |
| !! | AATTATAAAATACATATAAA+AGG | - | chr5.3:75984734-75984753 | None:intergenic | 5.0% |
| ATTTCGCCGGCGCAATAGTA+TGG | + | chr5.3:75982540-75982559 | MS.gene63820:intron | 50.0% | |
| CCACATGCAATCTAACCTGC+AGG | - | chr5.3:75983011-75983030 | None:intergenic | 50.0% | |
| CCGTCTTCCTGCTGAATTGA+AGG | + | chr5.3:75982374-75982393 | MS.gene63820:CDS | 50.0% | |
| CCTGCAGGTTAGATTGCATG+TGG | + | chr5.3:75983008-75983027 | MS.gene63820:intron | 50.0% | |
| CGAGGAACGTGTAAAGGAAC+AGG | + | chr5.3:75986588-75986607 | MS.gene63820:CDS | 50.0% | |
| CTTGCACCTACACTCTTCCA+TGG | - | chr5.3:75982900-75982919 | None:intergenic | 50.0% | |
| GCAGGTTAGATTGCATGTGG+AGG | + | chr5.3:75983011-75983030 | MS.gene63820:intron | 50.0% | |
| GGAGAAGCTGAGACAGTGAA+GGG | - | chr5.3:75982318-75982337 | None:intergenic | 50.0% | |
| GTCTTCCCATACTATTGCGC+CGG | - | chr5.3:75982549-75982568 | None:intergenic | 50.0% | |
| GTTGCACTGTGGTACATCCA+GGG | - | chr5.3:75985455-75985474 | None:intergenic | 50.0% | |
| TCGTCCTGGAAAAAAGGTCC+CGG | + | chr5.3:75983435-75983454 | MS.gene63820:CDS | 50.0% | |
| TGGAGAAGCTGAGACAGTGA+AGG | - | chr5.3:75982319-75982338 | None:intergenic | 50.0% | |
| TGGATGTACCACAGTGCAAC+AGG | + | chr5.3:75985455-75985474 | MS.gene63820:CDS | 50.0% | |
| TGTTGCACTGTGGTACATCC+AGG | - | chr5.3:75985456-75985475 | None:intergenic | 50.0% | |
| TTTCGCCGGCGCAATAGTAT+GGG | + | chr5.3:75982541-75982560 | MS.gene63820:intron | 50.0% | |
| ! | TATTGCGCCGGCGAAATTTC+AGG | - | chr5.3:75982537-75982556 | None:intergenic | 50.0% |
| !! | AGAAGGCGTTACAAGTCAGC+TGG | + | chr5.3:75984449-75984468 | MS.gene63820:CDS | 50.0% |
| !! | GCAGGAAGACGGTCATTTTC+TGG | - | chr5.3:75982366-75982385 | None:intergenic | 50.0% |
| !!! | CTTTCCGGGACCTTTTTTCC+AGG | - | chr5.3:75983442-75983461 | None:intergenic | 50.0% |
| CAGGTACCTGGATTTCGTCC+TGG | + | chr5.3:75983421-75983440 | MS.gene63820:intron | 55.0% | |
| CAGTCCTCGCATACCAGTGA+TGG | - | chr5.3:75983039-75983058 | None:intergenic | 55.0% | |
| GGTACCATCACTGGTATGCG+AGG | + | chr5.3:75983032-75983051 | MS.gene63820:CDS | 55.0% | |
| GGTTACTGGAAGGGCTTTGC+AGG | + | chr5.3:75984026-75984045 | MS.gene63820:intron | 55.0% | |
| !! | GCATGTGGAGGTACCATCAC+TGG | + | chr5.3:75983023-75983042 | MS.gene63820:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 75982144 | 75987110 | 75982144 | ID=MS.gene63820 |
| chr5.3 | mRNA | 75982144 | 75987110 | 75982144 | ID=MS.gene63820.t1;Parent=MS.gene63820 |
| chr5.3 | exon | 75982144 | 75982425 | 75982144 | ID=MS.gene63820.t1.exon1;Parent=MS.gene63820.t1 |
| chr5.3 | CDS | 75982144 | 75982425 | 75982144 | ID=cds.MS.gene63820.t1;Parent=MS.gene63820.t1 |
| chr5.3 | exon | 75983015 | 75983098 | 75983015 | ID=MS.gene63820.t1.exon2;Parent=MS.gene63820.t1 |
| chr5.3 | CDS | 75983015 | 75983098 | 75983015 | ID=cds.MS.gene63820.t1;Parent=MS.gene63820.t1 |
| chr5.3 | exon | 75983424 | 75983552 | 75983424 | ID=MS.gene63820.t1.exon3;Parent=MS.gene63820.t1 |
| chr5.3 | CDS | 75983424 | 75983552 | 75983424 | ID=cds.MS.gene63820.t1;Parent=MS.gene63820.t1 |
| chr5.3 | exon | 75984027 | 75984115 | 75984027 | ID=MS.gene63820.t1.exon4;Parent=MS.gene63820.t1 |
| chr5.3 | CDS | 75984027 | 75984115 | 75984027 | ID=cds.MS.gene63820.t1;Parent=MS.gene63820.t1 |
| chr5.3 | exon | 75984322 | 75984505 | 75984322 | ID=MS.gene63820.t1.exon5;Parent=MS.gene63820.t1 |
| chr5.3 | CDS | 75984322 | 75984505 | 75984322 | ID=cds.MS.gene63820.t1;Parent=MS.gene63820.t1 |
| chr5.3 | exon | 75984797 | 75984884 | 75984797 | ID=MS.gene63820.t1.exon6;Parent=MS.gene63820.t1 |
| chr5.3 | CDS | 75984797 | 75984884 | 75984797 | ID=cds.MS.gene63820.t1;Parent=MS.gene63820.t1 |
| chr5.3 | exon | 75984992 | 75985146 | 75984992 | ID=MS.gene63820.t1.exon7;Parent=MS.gene63820.t1 |
| chr5.3 | CDS | 75984992 | 75985146 | 75984992 | ID=cds.MS.gene63820.t1;Parent=MS.gene63820.t1 |
| chr5.3 | exon | 75985384 | 75985476 | 75985384 | ID=MS.gene63820.t1.exon8;Parent=MS.gene63820.t1 |
| chr5.3 | CDS | 75985384 | 75985476 | 75985384 | ID=cds.MS.gene63820.t1;Parent=MS.gene63820.t1 |
| chr5.3 | exon | 75985580 | 75985672 | 75985580 | ID=MS.gene63820.t1.exon9;Parent=MS.gene63820.t1 |
| chr5.3 | CDS | 75985580 | 75985672 | 75985580 | ID=cds.MS.gene63820.t1;Parent=MS.gene63820.t1 |
| chr5.3 | exon | 75985914 | 75985994 | 75985914 | ID=MS.gene63820.t1.exon10;Parent=MS.gene63820.t1 |
| chr5.3 | CDS | 75985914 | 75985994 | 75985914 | ID=cds.MS.gene63820.t1;Parent=MS.gene63820.t1 |
| chr5.3 | exon | 75986129 | 75986278 | 75986129 | ID=MS.gene63820.t1.exon11;Parent=MS.gene63820.t1 |
| chr5.3 | CDS | 75986129 | 75986278 | 75986129 | ID=cds.MS.gene63820.t1;Parent=MS.gene63820.t1 |
| chr5.3 | exon | 75986514 | 75986609 | 75986514 | ID=MS.gene63820.t1.exon12;Parent=MS.gene63820.t1 |
| chr5.3 | CDS | 75986514 | 75986609 | 75986514 | ID=cds.MS.gene63820.t1;Parent=MS.gene63820.t1 |
| chr5.3 | exon | 75987033 | 75987110 | 75987033 | ID=MS.gene63820.t1.exon13;Parent=MS.gene63820.t1 |
| chr5.3 | CDS | 75987033 | 75987110 | 75987033 | ID=cds.MS.gene63820.t1;Parent=MS.gene63820.t1 |
| Gene Sequence |
| Protein sequence |
