AlfalfaGEDB | MsG0180002981.01

M. sativa cultivar ZhongmuNo.1 / MsG0180002981.01

KEGG: -
GO: -
PFAM: PF05678

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180002981.01.T01	XP_013467671.2	88.757	169	10	4	1	168	24	184	9.27E-98	290

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180002981.01.T01	Q9M2P8	39.735	151	69	5	1	151	18	146	2.32E-23	93.6

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180002981.01.T01	A0A072VJT1	88.050	159	10	4	11	168	1	151	7.02e-79	240

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048036.01	MsG0180002981.01	0.814803	1.278985e-51	8.666810e-49
MsG0080048059.01	MsG0180002981.01	-0.804324	2.282015e-49	1.173154e-46
MsG0080049066.01	MsG0180002981.01	-0.837474	5.088305e-57	6.617178e-54
MsG0080049133.01	MsG0180002981.01	-0.800340	1.508791e-48	7.008215e-46
MsG0180000467.01	MsG0180002981.01	-0.816113	6.535781e-52	4.590319e-49
MsG0180002099.01	MsG0180002981.01	-0.854807	9.621161e-62	2.175479e-58
MsG0180002214.01	MsG0180002981.01	-0.809986	1.442638e-50	8.594132e-48
MsG0180002425.01	MsG0180002981.01	-0.814609	1.412159e-51	9.519301e-49
MsG0180002981.01	MsG0180003757.01	-0.840948	6.390955e-58	9.248747e-55
MsG0180002981.01	MsG0180003758.01	-0.819532	1.105368e-52	8.528846e-50
MsG0180002981.01	MsG0180003779.01	-0.818740	1.674187e-52	1.263667e-49
MsG0180002981.01	MsG0180003985.01	-0.800115	1.676885e-48	7.744060e-46
MsG0180002981.01	MsG0180004491.01	0.804140	2.491811e-49	1.275005e-46
MsG0180002981.01	MsG0180004502.01	-0.817565	3.087194e-52	2.256056e-49
MsG0180002981.01	MsG0180004553.01	-0.802685	4.988529e-49	2.459051e-46
MsG0180002981.01	MsG0180005328.01	0.845785	3.270319e-59	5.511996e-56
MsG0180002981.01	MsG0180005848.01	-0.800809	1.210631e-48	5.690159e-46
MsG0180002981.01	MsG0180006212.01	-0.827348	1.644363e-54	1.583520e-51
MsG0180002981.01	MsG0180006227.01	-0.822123	2.803459e-53	2.325426e-50
MsG0180002981.01	MsG0280006381.01	-0.825364	4.880873e-54	4.439302e-51
MsG0180002981.01	MsG0280006452.01	-0.818594	1.807267e-52	1.358569e-49
MsG0180002981.01	MsG0280006883.01	0.836959	6.891618e-57	8.822305e-54
MsG0180002981.01	MsG0280007216.01	0.816798	4.591922e-52	3.285898e-49
MsG0180002981.01	MsG0280007649.01	-0.828624	8.108246e-55	8.102900e-52
MsG0180002981.01	MsG0280007650.01	-0.831688	1.448797e-55	1.583968e-52
MsG0180002981.01	MsG0280007786.01	0.818664	1.742112e-52	1.312116e-49
MsG0180002981.01	MsG0280008405.01	0.848160	7.313244e-60	1.329937e-56
MsG0180002981.01	MsG0280009742.01	-0.821275	4.402402e-53	3.565203e-50
MsG0180002981.01	MsG0280009864.01	-0.801689	7.997226e-49	3.843353e-46
MsG0180002981.01	MsG0280010149.01	-0.832905	7.238669e-56	8.204192e-53
MsG0180002981.01	MsG0280010240.01	0.817512	3.173248e-52	2.315704e-49
MsG0180002981.01	MsG0280011165.01	0.817494	3.202824e-52	2.336119e-49
MsG0180002981.01	MsG0280011267.01	0.813572	2.391780e-51	1.567618e-48
MsG0180002981.01	MsG0280011301.01	-0.819674	1.026129e-52	7.948439e-50
MsG0180002981.01	MsG0380012281.01	-0.832582	8.704793e-56	9.771679e-53
MsG0180002981.01	MsG0380013114.01	-0.838346	3.037914e-57	4.057320e-54
MsG0180002981.01	MsG0380013272.01	0.813466	2.523436e-51	1.649255e-48
MsG0180002981.01	MsG0380013285.01	0.810595	1.065997e-50	6.452660e-48
MsG0180002981.01	MsG0380013300.01	0.847257	1.296511e-59	2.291182e-56
MsG0180002981.01	MsG0380013473.01	-0.809186	2.143369e-50	1.250037e-47
MsG0180002981.01	MsG0380013506.01	-0.811898	5.561699e-51	3.484721e-48
MsG0180002981.01	MsG0380013956.01	-0.808224	3.440785e-50	1.956367e-47
MsG0180002981.01	MsG0380014639.01	-0.822828	1.922388e-53	1.627082e-50
MsG0180002981.01	MsG0380014642.01	-0.821647	3.612416e-53	2.956183e-50
MsG0180002981.01	MsG0380014735.01	-0.817628	2.987990e-52	2.187318e-49
MsG0180002981.01	MsG0380015201.01	-0.813239	2.829993e-51	1.837992e-48
MsG0180002981.01	MsG0380015271.01	-0.806990	6.289875e-50	3.462718e-47
MsG0180002981.01	MsG0380015348.01	-0.810891	9.199226e-51	5.612939e-48
MsG0180002981.01	MsG0380015439.01	-0.801578	8.428100e-49	4.039161e-46
MsG0180002981.01	MsG0380015619.01	-0.806813	6.855989e-50	3.757282e-47
MsG0180002981.01	MsG0380015752.01	-0.830460	2.901172e-55	3.058194e-52
MsG0180002981.01	MsG0380015971.01	-0.807658	4.539930e-50	2.543104e-47
MsG0180002981.01	MsG0380016241.01	-0.801798	7.597401e-49	3.661388e-46
MsG0180002981.01	MsG0380016790.01	-0.804725	1.881570e-49	9.774332e-47
MsG0180002981.01	MsG0380016835.01	-0.835965	1.233815e-56	1.532805e-53
MsG0180002981.01	MsG0380016839.01	0.815183	1.053243e-51	7.210585e-49
MsG0180002981.01	MsG0380016931.01	-0.821148	4.710091e-53	3.801175e-50
MsG0180002981.01	MsG0380016934.01	-0.826754	2.280469e-54	2.158026e-51
MsG0180002981.01	MsG0380016935.01	-0.836081	1.153448e-56	1.438145e-53
MsG0180002981.01	MsG0380017405.01	-0.842576	2.376251e-58	3.618552e-55
MsG0180002981.01	MsG0380017406.01	-0.823020	1.734032e-53	1.475638e-50
MsG0180002981.01	MsG0380017690.01	0.809629	1.721844e-50	1.016173e-47
MsG0180002981.01	MsG0380017766.01	0.819763	9.791807e-53	7.603940e-50
MsG0180002981.01	MsG0380017812.01	-0.813925	1.999934e-51	1.323353e-48
MsG0180002981.01	MsG0380017895.01	-0.814211	1.729299e-51	1.153183e-48
MsG0180002981.01	MsG0380017962.01	-0.820587	6.339064e-53	5.036216e-50
MsG0180002981.01	MsG0480018201.01	-0.811306	7.476793e-51	4.611847e-48
MsG0180002981.01	MsG0480018203.01	-0.801747	7.780516e-49	3.744759e-46
MsG0180002981.01	MsG0480018463.01	-0.813942	1.982303e-51	1.312279e-48
MsG0180002981.01	MsG0480018563.01	0.816211	6.217108e-52	4.378204e-49
MsG0180002981.01	MsG0480018626.01	-0.824543	7.626183e-54	6.775657e-51
MsG0180002981.01	MsG0480018628.01	-0.833685	4.628334e-56	5.369318e-53
MsG0180002981.01	MsG0480019726.01	0.804439	2.159132e-49	1.113243e-46
MsG0180002981.01	MsG0480021131.01	0.817021	4.092698e-52	2.946801e-49
MsG0180002981.01	MsG0480021205.01	-0.807280	5.460411e-50	3.028957e-47
MsG0180002981.01	MsG0480021327.01	-0.835584	1.540787e-56	1.892361e-53
MsG0180002981.01	MsG0480021331.01	-0.838288	3.143364e-57	4.190466e-54
MsG0180002981.01	MsG0480022125.01	0.819050	1.423189e-52	1.083523e-49
MsG0180002981.01	MsG0480022400.01	0.814291	1.660310e-51	1.109656e-48
MsG0180002981.01	MsG0480022687.01	-0.807748	4.344828e-50	2.439604e-47
MsG0180002981.01	MsG0480022721.01	0.806804	6.886634e-50	3.773106e-47
MsG0180002981.01	MsG0480023152.01	-0.818651	1.753795e-52	1.320469e-49
MsG0180002981.01	MsG0480023187.01	-0.819594	1.069896e-52	8.269193e-50
MsG0180002981.01	MsG0480023217.01	-0.809254	2.072176e-50	1.210702e-47
MsG0180002981.01	MsG0480023695.01	-0.815007	1.152616e-51	7.853825e-49
MsG0180002981.01	MsG0580024140.01	-0.803014	4.266358e-49	2.120621e-46
MsG0180002981.01	MsG0580024309.01	-0.810381	1.185570e-50	7.135473e-48
MsG0180002981.01	MsG0580024398.01	0.801599	8.345051e-49	4.001297e-46
MsG0180002981.01	MsG0580024408.01	0.803650	3.150969e-49	1.592030e-46
MsG0180002981.01	MsG0580024442.01	-0.807968	3.900828e-50	2.202894e-47
MsG0180002981.01	MsG0580024493.01	-0.823249	1.533528e-53	1.313305e-50
MsG0180002981.01	MsG0580024678.01	-0.829277	5.633183e-55	5.739246e-52
MsG0180002981.01	MsG0580025105.01	-0.823575	1.286585e-53	1.112081e-50
MsG0180002981.01	MsG0580025486.01	-0.802904	4.496638e-49	2.228999e-46
MsG0180002981.01	MsG0580026362.01	-0.801481	8.823199e-49	4.218276e-46
MsG0180002981.01	MsG0580027325.01	-0.802869	4.570473e-49	2.263605e-46
MsG0180002981.01	MsG0580027646.01	0.825931	3.581142e-54	3.310492e-51
MsG0180002981.01	MsG0580029177.01	-0.811432	7.020832e-51	4.345362e-48
MsG0180002981.01	MsG0580030019.01	0.806052	9.917481e-50	5.330323e-47
MsG0180002981.01	MsG0580030133.01	0.815271	1.007147e-51	6.911960e-49
MsG0180002981.01	MsG0580030197.01	-0.831314	1.791080e-55	1.936437e-52
MsG0180002981.01	MsG0580030237.01	-0.804441	2.156583e-49	1.112010e-46
MsG0180002981.01	MsG0680030439.01	-0.809437	1.893257e-50	1.111558e-47
MsG0180002981.01	MsG0680030545.01	0.828202	1.024748e-54	1.011610e-51
MsG0180002981.01	MsG0680030635.01	-0.800978	1.118341e-48	5.279475e-46
MsG0180002981.01	MsG0680030960.01	0.832394	9.693413e-56	1.082058e-52
MsG0180002981.01	MsG0680030961.01	0.829378	5.324163e-55	5.440070e-52
MsG0180002981.01	MsG0680031813.01	-0.839620	1.421425e-57	1.973890e-54
MsG0180002981.01	MsG0680034229.01	-0.829321	5.496560e-55	5.607245e-52
MsG0180002981.01	MsG0680035584.01	-0.815894	7.316955e-52	5.107727e-49
MsG0180002981.01	MsG0680035841.01	0.825369	4.866921e-54	4.427310e-51
MsG0180002981.01	MsG0780035993.01	0.801598	8.348783e-49	4.002999e-46
MsG0180002981.01	MsG0780036068.01	-0.805658	1.200127e-49	6.385432e-47
MsG0180002981.01	MsG0780036661.01	0.803966	2.708890e-49	1.379904e-46
MsG0180002981.01	MsG0780037182.01	0.826340	2.862588e-54	2.677172e-51
MsG0180002981.01	MsG0780038047.01	-0.830922	2.235765e-55	2.389432e-52
MsG0180002981.01	MsG0780038922.01	0.807431	5.072747e-50	2.824903e-47
MsG0180002981.01	MsG0780038924.01	0.811208	7.853017e-51	4.831741e-48
MsG0180002981.01	MsG0780039821.01	-0.821178	4.634806e-53	3.743703e-50
MsG0180002981.01	MsG0780039836.01	-0.818277	2.132190e-52	1.588858e-49
MsG0180002981.01	MsG0780039838.01	-0.842168	3.048661e-58	4.582976e-55
MsG0180002981.01	MsG0780039839.01	-0.847422	1.168058e-59	2.075099e-56
MsG0180002981.01	MsG0780039968.01	0.802441	5.601463e-49	2.744116e-46
MsG0180002981.01	MsG0780040121.01	-0.827192	1.791824e-54	1.717545e-51
MsG0180002981.01	MsG0780040806.01	0.806242	9.047056e-50	4.886194e-47
MsG0180002981.01	MsG0780041198.01	0.821635	3.635168e-53	2.973757e-50
MsG0180002981.01	MsG0780041254.01	-0.809863	1.532930e-50	9.102270e-48
MsG0180002981.01	MsG0780041316.01	0.813839	2.088564e-51	1.378814e-48
MsG0180002981.01	MsG0780041620.01	-0.833932	4.013837e-56	4.691976e-53
MsG0180002981.01	MsG0780041720.01	-0.835361	1.754916e-56	2.141230e-53
MsG0180002981.01	MsG0780041783.01	-0.841963	3.454267e-58	5.159456e-55
MsG0180002981.01	MsG0780041809.01	-0.816739	4.733477e-52	3.381810e-49
MsG0180002981.01	MsG0880041855.01	-0.823321	1.475015e-53	1.265797e-50
MsG0180002981.01	MsG0880042495.01	0.801127	1.042346e-48	4.939211e-46
MsG0180002981.01	MsG0880042740.01	0.818525	1.872967e-52	1.405410e-49
MsG0180002981.01	MsG0880042858.01	-0.832279	1.034727e-55	1.150983e-52
MsG0180002981.01	MsG0880043109.01	0.811047	8.512607e-51	5.215431e-48
MsG0180002981.01	MsG0880043364.01	0.838654	2.529602e-57	3.410594e-54
MsG0180002981.01	MsG0880043828.01	0.814349	1.612194e-51	1.079160e-48
MsG0180002981.01	MsG0880044339.01	-0.822194	2.698140e-53	2.242589e-50
MsG0180002981.01	MsG0880045188.01	-0.823901	1.079007e-53	9.413454e-51
MsG0180002981.01	MsG0880045369.01	-0.812498	4.112697e-51	2.619149e-48
MsG0180002981.01	MsG0880045385.01	-0.823687	1.211375e-53	1.050542e-50
MsG0180002981.01	MsG0880045413.01	-0.815439	9.239657e-52	6.370574e-49
MsG0180002981.01	MsG0880045677.01	0.817601	3.030627e-52	2.216870e-49
MsG0180002981.01	MsG0880045968.01	-0.833368	5.551683e-56	6.380392e-53
MsG0180002981.01	MsG0880046176.01	0.801119	1.046486e-48	4.957740e-46
MsG0180002981.01	MsG0880046219.01	-0.841905	3.579376e-58	5.336370e-55
MsG0180002981.01	MsG0880046341.01	-0.824522	7.713735e-54	6.849112e-51
MsG0180002981.01	MsG0880046429.01	0.813226	2.849194e-51	1.849810e-48
MsG0180002981.01	MsG0880046469.01	-0.826765	2.266741e-54	2.145665e-51
MsG0180002981.01	MsG0880046996.01	0.806808	6.871092e-50	3.765137e-47
MsG0180002981.01	MsG0880047256.01	0.807500	4.902653e-50	2.735206e-47
MsG0180002981.01	MsG0880047318.01	-0.842347	2.734274e-58	4.134097e-55
MsG0180002981.01	MsG0880047493.01	0.831764	1.387539e-55	1.520546e-52

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180002981.01.T01	MTR_1g054055	88.050	159	10	4	11	168	1	151	1.78e-82	240
MsG0180002981.01.T01	MTR_2g061720	38.514	148	77	3	3	150	21	154	1.06e-23	91.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180002981.01.T01	AT3G58000	39.735	151	69	5	1	151	18	146	2.36e-24	93.6
MsG0180002981.01.T01	AT2G42140	38.562	153	70	4	1	152	19	148	4.61e-23	90.1
MsG0180002981.01.T01	AT2G44340	36.806	144	65	4	1	143	19	137	4.79e-19	80.1
MsG0180002981.01.T01	AT3G60090	72.727	44	12	0	1	44	31	74	4.97e-16	71.6

Find 26 sgRNAs with CRISPR-Local

Find 45 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATGTGAATTATTCGTATCTT+AGG	0.207900	1:-54252419	None:intergenic
GAGAGATGTGGTGGCTATTT+AGG	0.256894	1:+54252752	MsG0180002981.01.T01:CDS
GAACTTGTTCAGAAGTTAAC+TGG	0.301545	1:+54252485	MsG0180002981.01.T01:CDS
GGGTTTATTTCTGAAATTAA+TGG	0.329702	1:+54252794	MsG0180002981.01.T01:CDS
TGGATTTCCTTTGTTTCCCT+TGG	0.330042	1:+54252817	MsG0180002981.01.T01:CDS
AAGACAAGGGTAATTGTAGA+AGG	0.455330	1:+54252545	MsG0180002981.01.T01:CDS
GATGTGGTGGCTATTTAGGT+GGG	0.464069	1:+54252756	MsG0180002981.01.T01:CDS
TAATCTTTGTCTTCATCACT+TGG	0.466152	1:-54252512	None:intergenic
GTCAAAGAAGAAGTAGGTGG+TGG	0.492033	1:+54252719	MsG0180002981.01.T01:CDS
AGATGTGGTGGCTATTTAGG+TGG	0.506681	1:+54252755	MsG0180002981.01.T01:CDS
GATAAAGTCAAAGAAGAAGT+AGG	0.508334	1:+54252713	MsG0180002981.01.T01:CDS
TTTATTTCTGAAATTAATGG+TGG	0.513856	1:+54252797	MsG0180002981.01.T01:CDS
ATTGTGAGTGGCATGATCCA+AGG	0.542951	1:-54252834	None:intergenic
AGCACTACAAGCAGTGGCAG+TGG	0.554832	1:+54252605	MsG0180002981.01.T01:CDS
CATGCCACTCACAATATGCA+AGG	0.590941	1:+54252842	MsG0180002981.01.T01:CDS
TGGCAGTGGTTTATCATCAG+AGG	0.596180	1:+54252619	MsG0180002981.01.T01:CDS
TTGTGAGTGGCATGATCCAA+GGG	0.601677	1:-54252833	None:intergenic
GCATGATCCAAGGGAAACAA+AGG	0.604304	1:-54252824	None:intergenic
ACACCCTTGCATATTGTGAG+TGG	0.617076	1:-54252846	None:intergenic
TCAAGAAGCACTACAAGCAG+TGG	0.632435	1:+54252599	MsG0180002981.01.T01:CDS
ATTATTTCAAGAAGAAGACA+AGG	0.634299	1:+54252531	MsG0180002981.01.T01:CDS
AAAGTCAAAGAAGAAGTAGG+TGG	0.660011	1:+54252716	MsG0180002981.01.T01:CDS
ATGCCACTCACAATATGCAA+GGG	0.664055	1:+54252843	MsG0180002981.01.T01:CDS
AGCAGTGATGAGAGATGTGG+TGG	0.685118	1:+54252743	MsG0180002981.01.T01:CDS
GGAAGCAGTGATGAGAGATG+TGG	0.705953	1:+54252740	MsG0180002981.01.T01:CDS
TTATTTCAAGAAGAAGACAA+GGG	0.717654	1:+54252532	MsG0180002981.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATGATAACAATAAAAAATG+AGG	+	Chr1:54252652-54252671	MsG0180002981.01.T01:CDS	15.0%
!!!	TTTCATTTTTGATATTTTGT+GGG	-	Chr1:54252399-54252418	None:intergenic	15.0%
!!!	GTTTCATTTTTGATATTTTG+TGG	-	Chr1:54252400-54252419	None:intergenic	20.0%
!!!	TTTATTTCTGAAATTAATGG+TGG	+	Chr1:54252797-54252816	MsG0180002981.01.T01:CDS	20.0%
!	ATAAAAAATGAGGTGAGTAA+TGG	+	Chr1:54252662-54252681	MsG0180002981.01.T01:CDS	25.0%
!	ATGTGAATTATTCGTATCTT+AGG	-	Chr1:54252422-54252441	None:intergenic	25.0%
!	ATTATTTCAAGAAGAAGACA+AGG	+	Chr1:54252531-54252550	MsG0180002981.01.T01:CDS	25.0%
!	TTATTTCAAGAAGAAGACAA+GGG	+	Chr1:54252532-54252551	MsG0180002981.01.T01:CDS	25.0%
!!!	GGGTTTATTTCTGAAATTAA+TGG	+	Chr1:54252794-54252813	MsG0180002981.01.T01:CDS	25.0%
	GATAAAGTCAAAGAAGAAGT+AGG	+	Chr1:54252713-54252732	MsG0180002981.01.T01:CDS	30.0%
	GTAGAAGGATCAAAAAATGA+AGG	+	Chr1:54252560-54252579	MsG0180002981.01.T01:CDS	30.0%
	TAATCTTTGTCTTCATCACT+TGG	-	Chr1:54252515-54252534	None:intergenic	30.0%
!	AAACTGATGCTGAGAATTTT+AGG	+	Chr1:54252462-54252481	MsG0180002981.01.T01:CDS	30.0%
!	AACTGATGCTGAGAATTTTA+GGG	+	Chr1:54252463-54252482	MsG0180002981.01.T01:CDS	30.0%
	AAAAATGAGGTGAGTAATGG+TGG	+	Chr1:54252665-54252684	MsG0180002981.01.T01:CDS	35.0%
	AAAGTCAAAGAAGAAGTAGG+TGG	+	Chr1:54252716-54252735	MsG0180002981.01.T01:CDS	35.0%
	AAGACAAGGGTAATTGTAGA+AGG	+	Chr1:54252545-54252564	MsG0180002981.01.T01:CDS	35.0%
!	GAACTTGTTCAGAAGTTAAC+TGG	+	Chr1:54252485-54252504	MsG0180002981.01.T01:CDS	35.0%
!!	AGCATCAGTTTTGATGATCT+CGG	-	Chr1:54252453-54252472	None:intergenic	35.0%
!!	TTTAGGTGGGTTTTCAGATT+TGG	+	Chr1:54252769-54252788	MsG0180002981.01.T01:CDS	35.0%
	ATGCCACTCACAATATGCAA+GGG	+	Chr1:54252843-54252862	MsG0180002981.01.T01:CDS	40.0%
!	AGGTGAGTAATGGTGGTTTT+TGG	+	Chr1:54252672-54252691	MsG0180002981.01.T01:CDS	40.0%
!	GGTGAGTAATGGTGGTTTTT+GGG	+	Chr1:54252673-54252692	MsG0180002981.01.T01:CDS	40.0%
!	GTGAGTAATGGTGGTTTTTG+GGG	+	Chr1:54252674-54252693	MsG0180002981.01.T01:CDS	40.0%
!	GTGGGTTTTCAGATTTGGAA+GGG	+	Chr1:54252774-54252793	MsG0180002981.01.T01:CDS	40.0%
!	TGGATTTCCTTTGTTTCCCT+TGG	+	Chr1:54252817-54252836	MsG0180002981.01.T01:CDS	40.0%
!!	GCATCAGTTTTGATGATCTC+GGG	-	Chr1:54252452-54252471	None:intergenic	40.0%
!!	TGAGTAATGGTGGTTTTTGG+GGG	+	Chr1:54252675-54252694	MsG0180002981.01.T01:CDS	40.0%
	ACACCCTTGCATATTGTGAG+TGG	-	Chr1:54252849-54252868	None:intergenic	45.0%
	AGATGTGGTGGCTATTTAGG+TGG	+	Chr1:54252755-54252774	MsG0180002981.01.T01:CDS	45.0%
	ATTGTGAGTGGCATGATCCA+AGG	-	Chr1:54252837-54252856	None:intergenic	45.0%
	CATGCCACTCACAATATGCA+AGG	+	Chr1:54252842-54252861	MsG0180002981.01.T01:CDS	45.0%
	GAGAGATGTGGTGGCTATTT+AGG	+	Chr1:54252752-54252771	MsG0180002981.01.T01:CDS	45.0%
	GATGTGGTGGCTATTTAGGT+GGG	+	Chr1:54252756-54252775	MsG0180002981.01.T01:CDS	45.0%
	GCATGATCCAAGGGAAACAA+AGG	-	Chr1:54252827-54252846	None:intergenic	45.0%
	GTCAAAGAAGAAGTAGGTGG+TGG	+	Chr1:54252719-54252738	MsG0180002981.01.T01:CDS	45.0%
	TGGCAGTGGTTTATCATCAG+AGG	+	Chr1:54252619-54252638	MsG0180002981.01.T01:CDS	45.0%
	TTGTGAGTGGCATGATCCAA+GGG	-	Chr1:54252836-54252855	None:intergenic	45.0%
!!	GGTGGGTTTTCAGATTTGGA+AGG	+	Chr1:54252773-54252792	MsG0180002981.01.T01:CDS	45.0%
!!	TAATGGTGGTTTTTGGGGGT+TGG	+	Chr1:54252679-54252698	MsG0180002981.01.T01:CDS	45.0%
!!	TCAAGAAGCACTACAAGCAG+TGG	+	Chr1:54252599-54252618	MsG0180002981.01.T01:CDS	45.0%
	AGCAGTGATGAGAGATGTGG+TGG	+	Chr1:54252743-54252762	MsG0180002981.01.T01:CDS	50.0%
	GGAAGCAGTGATGAGAGATG+TGG	+	Chr1:54252740-54252759	MsG0180002981.01.T01:CDS	50.0%
	TTGGGGGTTGGATCTGACAA+TGG	+	Chr1:54252691-54252710	MsG0180002981.01.T01:CDS	50.0%
	AGCACTACAAGCAGTGGCAG+TGG	+	Chr1:54252605-54252624	MsG0180002981.01.T01:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	54252383	54252889	54252383	ID=MsG0180002981.01;Name=MsG0180002981.01
Chr1	mRNA	54252383	54252889	54252383	ID=MsG0180002981.01.T01;Parent=MsG0180002981.01;Name=MsG0180002981.01.T01;_AED=0.21;_eAED=0.21;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|168
Chr1	exon	54252383	54252889	54252383	ID=MsG0180002981.01.T01:exon:22241;Parent=MsG0180002981.01.T01
Chr1	CDS	54252383	54252889	54252383	ID=MsG0180002981.01.T01:cds;Parent=MsG0180002981.01.T01

Gene Sequence

>MsG0180002981.01.T01

ATGCATAAAGATTCCCACAAAATATCAAAAATGAAACCTAAGATACGAATAATTCACATATATGCACCCGAGATCATCAAAACTGATGCTGAGAATTTTAGGGAACTTGTTCAGAAGTTAACTGGAAAACCAAGTGATGAAGACAAAGATTATTTCAAGAAGAAGACAAGGGTAATTGTAGAAGGATCAAAAAATGAAGGAAGAGAGCAAGAATCTTCAAGAAGCACTACAAGCAGTGGCAGTGGTTTATCATCAGAGGATTGTTCAAGAATGATAACAATAAAAAATGAGGTGAGTAATGGTGGTTTTTGGGGGTTGGATCTGACAATGGATAAAGTCAAAGAAGAAGTAGGTGGTGGAAGCAGTGATGAGAGATGTGGTGGCTATTTAGGTGGGTTTTCAGATTTGGAAGGGTTTATTTCTGAAATTAATGGTGGATTTCCTTTGTTTCCCTTGGATCATGCCACTCACAATATGCAAGGGTGTGAACAATATCAACTACTATAA

Protein sequence

>MsG0180002981.01.T01

MHKDSHKISKMKPKIRIIHIYAPEIIKTDAENFRELVQKLTGKPSDEDKDYFKKKTRVIVEGSKNEGREQESSRSTTSSGSGLSSEDCSRMITIKNEVSNGGFWGLDLTMDKVKEEVGGGSSDERCGGYLGGFSDLEGFISEINGGFPLFPLDHATHNMQGCEQYQLL*