Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017782.01.T01 | KAF7817582.1 | 68.441 | 263 | 45 | 1 | 1 | 225 | 1 | 263 | 3.60E-120 | 352 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017782.01.T01 | B2WSN0 | 71.942 | 139 | 39 | 0 | 87 | 225 | 171 | 309 | 1.48E-65 | 207 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017782.01.T01 | A0A834WCK7 | 68.441 | 263 | 45 | 1 | 1 | 225 | 1 | 263 | 1.72e-120 | 352 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047910.01 | MsG0380017782.01 | 0.837818 | 4.153914e-57 | 5.459663e-54 |
| MsG0080047945.01 | MsG0380017782.01 | 0.807871 | 4.089237e-50 | 2.303417e-47 |
| MsG0080048917.01 | MsG0380017782.01 | 0.831415 | 1.691205e-55 | 1.833948e-52 |
| MsG0080048929.01 | MsG0380017782.01 | 0.829856 | 4.073826e-55 | 4.221244e-52 |
| MsG0080049053.01 | MsG0380017782.01 | 0.828867 | 7.080292e-55 | 7.125124e-52 |
| MsG0080049072.01 | MsG0380017782.01 | 0.805509 | 1.289595e-49 | 6.834856e-47 |
| MsG0180000193.01 | MsG0380017782.01 | 0.809439 | 1.891565e-50 | 1.110619e-47 |
| MsG0180000194.01 | MsG0380017782.01 | 0.803626 | 3.186156e-49 | 1.608878e-46 |
| MsG0180000306.01 | MsG0380017782.01 | 0.807939 | 3.955969e-50 | 2.232322e-47 |
| MsG0180000325.01 | MsG0380017782.01 | 0.814937 | 1.194443e-51 | 8.122969e-49 |
| MsG0180000352.01 | MsG0380017782.01 | 0.821067 | 4.916699e-53 | 3.959332e-50 |
| MsG0180000467.01 | MsG0380017782.01 | 0.801902 | 7.230818e-49 | 3.494055e-46 |
| MsG0180001113.01 | MsG0380017782.01 | 0.822876 | 1.873304e-53 | 1.587620e-50 |
| MsG0180001264.01 | MsG0380017782.01 | -0.804613 | 1.985624e-49 | 1.028427e-46 |
| MsG0180001614.01 | MsG0380017782.01 | 0.805273 | 1.445515e-49 | 7.614980e-47 |
| MsG0180003296.01 | MsG0380017782.01 | 0.816614 | 5.049997e-52 | 3.595541e-49 |
| MsG0180003779.01 | MsG0380017782.01 | 0.816259 | 6.065518e-52 | 4.277070e-49 |
| MsG0180003904.01 | MsG0380017782.01 | 0.804354 | 2.249091e-49 | 1.157145e-46 |
| MsG0180003933.01 | MsG0380017782.01 | 0.804040 | 2.614777e-49 | 1.334490e-46 |
| MsG0180003980.01 | MsG0380017782.01 | 0.810642 | 1.041206e-50 | 6.310614e-48 |
| MsG0180003985.01 | MsG0380017782.01 | 0.815074 | 1.113780e-51 | 7.602449e-49 |
| MsG0180004163.01 | MsG0380017782.01 | 0.809049 | 2.293040e-50 | 1.332393e-47 |
| MsG0180004177.01 | MsG0380017782.01 | 0.825928 | 3.586932e-54 | 3.315538e-51 |
| MsG0180004386.01 | MsG0380017782.01 | 0.810113 | 1.354374e-50 | 8.094971e-48 |
| MsG0180004554.01 | MsG0380017782.01 | 0.833622 | 4.796915e-56 | 5.554614e-53 |
| MsG0180004739.01 | MsG0380017782.01 | 0.825888 | 3.666884e-54 | 3.385606e-51 |
| MsG0180005291.01 | MsG0380017782.01 | 0.827855 | 1.242278e-54 | 1.214003e-51 |
| MsG0180005431.01 | MsG0380017782.01 | 0.801987 | 6.947761e-49 | 3.364367e-46 |
| MsG0180005879.01 | MsG0380017782.01 | 0.807238 | 5.572046e-50 | 3.087521e-47 |
| MsG0180006042.01 | MsG0380017782.01 | 0.827994 | 1.150113e-54 | 1.128509e-51 |
| MsG0180006159.01 | MsG0380017782.01 | 0.835889 | 1.290004e-56 | 1.598954e-53 |
| MsG0180006223.01 | MsG0380017782.01 | 0.831342 | 1.762932e-55 | 1.907612e-52 |
| MsG0280006307.01 | MsG0380017782.01 | 0.807801 | 4.232922e-50 | 2.380056e-47 |
| MsG0280006336.01 | MsG0380017782.01 | 0.820778 | 5.728816e-53 | 4.575904e-50 |
| MsG0280010704.01 | MsG0380017782.01 | 0.822860 | 1.890064e-53 | 1.601091e-50 |
| MsG0280011162.01 | MsG0380017782.01 | 0.851394 | 9.135668e-61 | 1.846586e-57 |
| MsG0280011200.01 | MsG0380017782.01 | 0.807282 | 5.455128e-50 | 3.026204e-47 |
| MsG0280011276.01 | MsG0380017782.01 | 0.829588 | 4.732020e-55 | 4.864471e-52 |
| MsG0280011475.01 | MsG0380017782.01 | 0.814792 | 1.286036e-51 | 8.712014e-49 |
| MsG0380011896.01 | MsG0380017782.01 | 0.813311 | 2.728829e-51 | 1.775923e-48 |
| MsG0380012780.01 | MsG0380017782.01 | 0.822925 | 1.824733e-53 | 1.548591e-50 |
| MsG0380012801.01 | MsG0380017782.01 | 0.813367 | 2.652846e-51 | 1.729139e-48 |
| MsG0380012876.01 | MsG0380017782.01 | 0.813478 | 2.508796e-51 | 1.640168e-48 |
| MsG0380014729.01 | MsG0380017782.01 | 0.811498 | 6.792983e-51 | 4.211730e-48 |
| MsG0380015081.01 | MsG0380017782.01 | 0.811465 | 6.906677e-51 | 4.278374e-48 |
| MsG0380015111.01 | MsG0380017782.01 | 0.818156 | 2.270428e-52 | 1.686315e-49 |
| MsG0380015546.01 | MsG0380017782.01 | 0.803211 | 3.885231e-49 | 1.941034e-46 |
| MsG0380015719.01 | MsG0380017782.01 | 0.804967 | 1.674970e-49 | 8.755285e-47 |
| MsG0380015900.01 | MsG0380017782.01 | 0.840195 | 1.006215e-57 | 1.422614e-54 |
| MsG0380016699.01 | MsG0380017782.01 | 0.822142 | 2.775348e-53 | 2.303374e-50 |
| MsG0380016932.01 | MsG0380017782.01 | 0.826124 | 3.222630e-54 | 2.995277e-51 |
| MsG0380016957.01 | MsG0380017782.01 | 0.809706 | 1.657496e-50 | 9.801291e-48 |
| MsG0380016960.01 | MsG0380017782.01 | 0.803445 | 3.474948e-49 | 1.746542e-46 |
| MsG0380017018.01 | MsG0380017782.01 | 0.833265 | 5.890527e-56 | 6.748448e-53 |
| MsG0380017143.01 | MsG0380017782.01 | 0.804848 | 1.774083e-49 | 9.245043e-47 |
| MsG0380017309.01 | MsG0380017782.01 | 0.819997 | 8.656870e-53 | 6.766642e-50 |
| MsG0380017472.01 | MsG0380017782.01 | 0.820760 | 5.786414e-53 | 4.619571e-50 |
| MsG0380017474.01 | MsG0380017782.01 | 0.817041 | 4.050076e-52 | 2.917646e-49 |
| MsG0380017651.01 | MsG0380017782.01 | 0.805975 | 1.029780e-49 | 5.523864e-47 |
| MsG0380017782.01 | MsG0380017884.01 | 0.811456 | 6.937208e-51 | 4.296387e-48 |
| MsG0380017782.01 | MsG0380017895.01 | 0.808169 | 3.534753e-50 | 2.006952e-47 |
| MsG0380017782.01 | MsG0380017966.01 | 0.831686 | 1.450228e-55 | 1.585461e-52 |
| MsG0380017782.01 | MsG0380018066.01 | 0.836140 | 1.113874e-56 | 1.391283e-53 |
| MsG0380017782.01 | MsG0380018072.01 | 0.820246 | 7.592539e-53 | 5.975608e-50 |
| MsG0380017782.01 | MsG0480018190.01 | 0.811137 | 8.137503e-51 | 4.997388e-48 |
| MsG0380017782.01 | MsG0480018196.01 | 0.800273 | 1.557366e-48 | 7.221135e-46 |
| MsG0380017782.01 | MsG0480020496.01 | 0.806080 | 9.784377e-50 | 5.262516e-47 |
| MsG0380017782.01 | MsG0480020498.01 | 0.812314 | 4.513213e-51 | 2.860076e-48 |
| MsG0380017782.01 | MsG0480021254.01 | 0.810607 | 1.059839e-50 | 6.417407e-48 |
| MsG0380017782.01 | MsG0480021303.01 | 0.800550 | 1.367289e-48 | 6.384540e-46 |
| MsG0380017782.01 | MsG0480021317.01 | 0.817270 | 3.598076e-52 | 2.608163e-49 |
| MsG0380017782.01 | MsG0480021521.01 | 0.814686 | 1.357864e-51 | 9.172139e-49 |
| MsG0380017782.01 | MsG0480021709.01 | 0.838418 | 2.910898e-57 | 3.896472e-54 |
| MsG0380017782.01 | MsG0480021777.01 | 0.802223 | 6.212590e-49 | 3.026573e-46 |
| MsG0380017782.01 | MsG0480022286.01 | 0.833658 | 4.699414e-56 | 5.447631e-53 |
| MsG0380017782.01 | MsG0480022295.01 | 0.812463 | 4.186747e-51 | 2.663928e-48 |
| MsG0380017782.01 | MsG0480022366.01 | 0.823524 | 1.322656e-53 | 1.141635e-50 |
| MsG0380017782.01 | MsG0480022417.01 | 0.821313 | 4.315641e-53 | 3.498755e-50 |
| MsG0380017782.01 | MsG0480022466.01 | 0.832792 | 7.720947e-56 | 8.721325e-53 |
| MsG0380017782.01 | MsG0480022837.01 | 0.826418 | 2.742819e-54 | 2.570891e-51 |
| MsG0380017782.01 | MsG0480023558.01 | 0.811324 | 7.410569e-51 | 4.573161e-48 |
| MsG0380017782.01 | MsG0480023749.01 | 0.801296 | 9.626197e-49 | 4.580809e-46 |
| MsG0380017782.01 | MsG0480023881.01 | 0.813421 | 2.581443e-51 | 1.685041e-48 |
| MsG0380017782.01 | MsG0580024385.01 | 0.837471 | 5.097020e-57 | 6.628030e-54 |
| MsG0380017782.01 | MsG0580024487.01 | 0.809778 | 1.599105e-50 | 9.474502e-48 |
| MsG0380017782.01 | MsG0580024571.01 | 0.810267 | 1.254876e-50 | 7.530092e-48 |
| MsG0380017782.01 | MsG0580024678.01 | 0.803739 | 3.019024e-49 | 1.528941e-46 |
| MsG0380017782.01 | MsG0580024875.01 | 0.824137 | 9.498264e-54 | 8.341437e-51 |
| MsG0380017782.01 | MsG0580024982.01 | 0.805526 | 1.279608e-49 | 6.784867e-47 |
| MsG0380017782.01 | MsG0580025513.01 | 0.817510 | 3.177007e-52 | 2.318333e-49 |
| MsG0380017782.01 | MsG0580026211.01 | 0.814397 | 1.573143e-51 | 1.054446e-48 |
| MsG0380017782.01 | MsG0580027095.01 | 0.801412 | 9.114226e-49 | 4.349726e-46 |
| MsG0380017782.01 | MsG0580028461.01 | 0.820362 | 7.139581e-53 | 5.637237e-50 |
| MsG0380017782.01 | MsG0580029172.01 | 0.814214 | 1.726557e-51 | 1.151461e-48 |
| MsG0380017782.01 | MsG0580029816.01 | 0.827337 | 1.654433e-54 | 1.592684e-51 |
| MsG0380017782.01 | MsG0680030290.01 | 0.834189 | 3.460649e-56 | 4.075869e-53 |
| MsG0380017782.01 | MsG0680032055.01 | 0.819429 | 1.166923e-52 | 8.977519e-50 |
| MsG0380017782.01 | MsG0680032840.01 | 0.814898 | 1.218409e-51 | 8.277170e-49 |
| MsG0380017782.01 | MsG0680033007.01 | 0.806775 | 6.982158e-50 | 3.822510e-47 |
| MsG0380017782.01 | MsG0680034419.01 | 0.812400 | 4.321928e-51 | 2.745302e-48 |
| MsG0380017782.01 | MsG0780036064.01 | 0.806224 | 9.126352e-50 | 4.926825e-47 |
| MsG0380017782.01 | MsG0780036236.01 | 0.809953 | 1.466213e-50 | 8.726849e-48 |
| MsG0380017782.01 | MsG0780036909.01 | 0.830778 | 2.424421e-55 | 2.580015e-52 |
| MsG0380017782.01 | MsG0780038839.01 | 0.806943 | 6.434391e-50 | 3.538016e-47 |
| MsG0380017782.01 | MsG0780038848.01 | 0.826248 | 3.010823e-54 | 2.808434e-51 |
| MsG0380017782.01 | MsG0780039596.01 | 0.829001 | 6.571448e-55 | 6.639199e-52 |
| MsG0380017782.01 | MsG0780039860.01 | 0.816858 | 4.451545e-52 | 3.190807e-49 |
| MsG0380017782.01 | MsG0780039902.01 | 0.830918 | 2.240130e-55 | 2.393898e-52 |
| MsG0380017782.01 | MsG0780040158.01 | 0.809768 | 1.607559e-50 | 9.521927e-48 |
| MsG0380017782.01 | MsG0780040159.01 | 0.830317 | 3.143772e-55 | 3.300506e-52 |
| MsG0380017782.01 | MsG0780040352.01 | 0.820475 | 6.724529e-53 | 5.326274e-50 |
| MsG0380017782.01 | MsG0780040567.01 | 0.814896 | 1.219870e-51 | 8.286499e-49 |
| MsG0380017782.01 | MsG0780040644.01 | 0.814620 | 1.403925e-51 | 9.466528e-49 |
| MsG0380017782.01 | MsG0780040804.01 | 0.824127 | 9.553642e-54 | 8.387307e-51 |
| MsG0380017782.01 | MsG0780040833.01 | 0.819467 | 1.143995e-52 | 8.810845e-50 |
| MsG0380017782.01 | MsG0780040884.01 | 0.818680 | 1.727836e-52 | 1.301952e-49 |
| MsG0380017782.01 | MsG0780040894.01 | 0.805877 | 1.079574e-49 | 5.776332e-47 |
| MsG0380017782.01 | MsG0780041106.01 | 0.801321 | 9.515361e-49 | 4.530835e-46 |
| MsG0380017782.01 | MsG0880042500.01 | 0.806702 | 7.236728e-50 | 3.954415e-47 |
| MsG0380017782.01 | MsG0880042889.01 | 0.842663 | 2.253239e-58 | 3.440307e-55 |
| MsG0380017782.01 | MsG0880043032.01 | 0.816661 | 4.929969e-52 | 3.514713e-49 |
| MsG0380017782.01 | MsG0880044312.01 | 0.822312 | 2.534299e-53 | 2.113642e-50 |
| MsG0380017782.01 | MsG0880044314.01 | 0.803282 | 3.754603e-49 | 1.879183e-46 |
| MsG0380017782.01 | MsG0880044352.01 | 0.825973 | 3.500376e-54 | 3.239676e-51 |
| MsG0380017782.01 | MsG0880045361.01 | 0.812550 | 4.006249e-51 | 2.554887e-48 |
| MsG0380017782.01 | MsG0880045778.01 | 0.826276 | 2.964115e-54 | 2.767064e-51 |
| MsG0380017782.01 | MsG0880046040.01 | 0.806711 | 7.203551e-50 | 3.937251e-47 |
| MsG0380017782.01 | MsG0880046041.01 | 0.832372 | 9.814053e-56 | 1.094782e-52 |
| MsG0380017782.01 | MsG0880046104.01 | 0.828077 | 1.098271e-54 | 1.080275e-51 |
| MsG0380017782.01 | MsG0880046759.01 | 0.825400 | 4.785512e-54 | 4.357167e-51 |
| MsG0380017782.01 | MsG0880046876.01 | 0.803666 | 3.125665e-49 | 1.579911e-46 |
| MsG0380017782.01 | MsG0880047363.01 | 0.807299 | 5.410040e-50 | 3.002485e-47 |
| MsG0380017782.01 | MsG0880047536.01 | 0.804419 | 2.179495e-49 | 1.123176e-46 |
| MsG0380017782.01 | MsG0880047567.01 | 0.829097 | 6.229571e-55 | 6.312071e-52 |
| MsG0380017782.01 | MsG0880047578.01 | 0.800308 | 1.531831e-48 | 7.109482e-46 |
| MsG0380017782.01 | MsG0880047628.01 | 0.825320 | 4.998202e-54 | 4.540773e-51 |
| MsG0380017782.01 | MsG0880047661.01 | 0.836911 | 7.087762e-57 | 9.060023e-54 |
| MsG0380017782.01 | MsG0880047723.01 | 0.803590 | 3.242361e-49 | 1.635804e-46 |
| MsG0280006607.01 | MsG0380017782.01 | 0.831825 | 1.339784e-55 | 1.470875e-52 |
| MsG0280007102.01 | MsG0380017782.01 | 0.801637 | 8.196418e-49 | 3.933956e-46 |
| MsG0280007136.01 | MsG0380017782.01 | 0.814610 | 1.411156e-51 | 9.512900e-49 |
| MsG0280007831.01 | MsG0380017782.01 | 0.805758 | 1.143636e-49 | 6.100759e-47 |
| MsG0280008430.01 | MsG0380017782.01 | 0.815612 | 8.454055e-52 | 5.857156e-49 |
| MsG0280008935.01 | MsG0380017782.01 | 0.835219 | 1.906237e-56 | 2.315912e-53 |
| MsG0280010016.01 | MsG0380017782.01 | 0.821477 | 3.954570e-53 | 3.220740e-50 |
| MsG0280010356.01 | MsG0380017782.01 | 0.827000 | 1.991820e-54 | 1.898442e-51 |
| MsG0280010496.01 | MsG0380017782.01 | 0.803902 | 2.793263e-49 | 1.420587e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017782.01.T01 | MTR_3g111990 | 90.370 | 135 | 13 | 0 | 91 | 225 | 174 | 308 | 3.09e-85 | 255 |
| MsG0380017782.01.T01 | MTR_3g111990 | 87.379 | 103 | 13 | 0 | 1 | 103 | 1 | 103 | 3.21e-55 | 179 |
| MsG0380017782.01.T01 | MTR_3g111980 | 71.852 | 135 | 38 | 0 | 91 | 225 | 176 | 310 | 2.01e-64 | 202 |
| MsG0380017782.01.T01 | MTR_3g111980 | 74.757 | 103 | 26 | 0 | 1 | 103 | 1 | 103 | 5.64e-46 | 155 |
| MsG0380017782.01.T01 | MTR_3g116840 | 62.963 | 135 | 50 | 0 | 91 | 225 | 178 | 312 | 9.34e-58 | 185 |
| MsG0380017782.01.T01 | MTR_3g116840 | 63.636 | 99 | 36 | 0 | 5 | 103 | 9 | 107 | 2.27e-36 | 130 |
| MsG0380017782.01.T01 | MTR_5g020740 | 61.481 | 135 | 52 | 0 | 91 | 225 | 175 | 309 | 5.72e-55 | 178 |
| MsG0380017782.01.T01 | MTR_5g020740 | 66.667 | 102 | 34 | 0 | 2 | 103 | 3 | 104 | 2.73e-38 | 135 |
| MsG0380017782.01.T01 | MTR_4g070370 | 60.163 | 123 | 49 | 0 | 103 | 225 | 189 | 311 | 1.18e-50 | 167 |
| MsG0380017782.01.T01 | MTR_4g070370 | 60.396 | 101 | 40 | 0 | 3 | 103 | 6 | 106 | 4.13e-35 | 127 |
| MsG0380017782.01.T01 | MTR_4g070340 | 52.206 | 136 | 65 | 0 | 87 | 222 | 123 | 258 | 1.83e-47 | 158 |
| MsG0380017782.01.T01 | MTR_4g070340 | 52.206 | 136 | 65 | 0 | 87 | 222 | 172 | 307 | 2.60e-47 | 159 |
| MsG0380017782.01.T01 | MTR_4g070340 | 56.311 | 103 | 45 | 0 | 1 | 103 | 3 | 105 | 5.71e-35 | 127 |
| MsG0380017782.01.T01 | MTR_4g070340 | 52.206 | 136 | 65 | 0 | 87 | 222 | 167 | 302 | 2.65e-47 | 159 |
| MsG0380017782.01.T01 | MTR_4g070340 | 59.794 | 97 | 39 | 0 | 5 | 101 | 7 | 103 | 5.11e-35 | 127 |
| MsG0380017782.01.T01 | MTR_4g070360 | 48.889 | 135 | 69 | 0 | 91 | 225 | 175 | 309 | 8.96e-41 | 141 |
| MsG0380017782.01.T01 | MTR_4g070360 | 49.495 | 99 | 50 | 0 | 3 | 101 | 2 | 100 | 2.72e-21 | 90.1 |
| MsG0380017782.01.T01 | MTR_5g020800 | 51.852 | 135 | 64 | 1 | 91 | 225 | 185 | 318 | 6.15e-39 | 137 |
| MsG0380017782.01.T01 | MTR_5g020800 | 47.458 | 118 | 51 | 1 | 1 | 107 | 1 | 118 | 4.94e-25 | 100 |
| MsG0380017782.01.T01 | MTR_5g020760 | 51.111 | 135 | 65 | 1 | 91 | 225 | 185 | 318 | 1.72e-38 | 135 |
| MsG0380017782.01.T01 | MTR_5g020760 | 47.458 | 118 | 51 | 1 | 1 | 107 | 1 | 118 | 5.31e-25 | 100 |
| MsG0380017782.01.T01 | MTR_3g008100 | 44.203 | 138 | 68 | 2 | 88 | 225 | 170 | 298 | 6.93e-33 | 121 |
| MsG0380017782.01.T01 | MTR_3g008100 | 34.000 | 100 | 57 | 2 | 2 | 100 | 3 | 94 | 4.42e-14 | 70.5 |
| MsG0380017782.01.T01 | MTR_3g008100 | 44.203 | 138 | 68 | 2 | 88 | 225 | 177 | 305 | 8.13e-33 | 121 |
| MsG0380017782.01.T01 | MTR_3g008100 | 36.000 | 100 | 62 | 2 | 2 | 100 | 3 | 101 | 5.29e-17 | 78.6 |
| MsG0380017782.01.T01 | MTR_3g008100 | 31.250 | 240 | 144 | 8 | 2 | 225 | 3 | 237 | 7.36e-31 | 114 |
| MsG0380017782.01.T01 | MTR_8g071130 | 45.185 | 135 | 73 | 1 | 91 | 225 | 179 | 312 | 1.23e-30 | 115 |
| MsG0380017782.01.T01 | MTR_8g071130 | 42.453 | 106 | 56 | 1 | 3 | 103 | 2 | 107 | 1.49e-19 | 85.5 |
| MsG0380017782.01.T01 | MTR_3g007970 | 40.411 | 146 | 85 | 2 | 81 | 225 | 161 | 305 | 1.72e-29 | 112 |
| MsG0380017782.01.T01 | MTR_3g007970 | 41.000 | 100 | 57 | 2 | 2 | 100 | 3 | 101 | 1.91e-19 | 85.5 |
| MsG0380017782.01.T01 | MTR_3g008140 | 44.715 | 123 | 66 | 2 | 103 | 225 | 184 | 304 | 4.31e-28 | 108 |
| MsG0380017782.01.T01 | MTR_3g008140 | 44.000 | 100 | 54 | 2 | 2 | 100 | 3 | 101 | 2.47e-20 | 87.8 |
| MsG0380017782.01.T01 | MTR_5g027290 | 44.628 | 121 | 65 | 1 | 104 | 224 | 192 | 310 | 1.08e-27 | 107 |
| MsG0380017782.01.T01 | MTR_5g027290 | 41.905 | 105 | 56 | 1 | 4 | 103 | 3 | 107 | 1.73e-19 | 85.5 |
| MsG0380017782.01.T01 | MTR_5g027240 | 45.763 | 118 | 62 | 1 | 104 | 221 | 192 | 307 | 5.01e-27 | 105 |
| MsG0380017782.01.T01 | MTR_5g027240 | 42.857 | 105 | 55 | 1 | 4 | 103 | 3 | 107 | 2.82e-20 | 87.4 |
| MsG0380017782.01.T01 | MTR_1g093720 | 39.259 | 135 | 82 | 0 | 91 | 225 | 184 | 318 | 3.23e-26 | 104 |
| MsG0380017782.01.T01 | MTR_5g020760 | 47.458 | 118 | 51 | 1 | 1 | 107 | 1 | 118 | 1.85e-25 | 100 |
| MsG0380017782.01.T01 | MTR_5g020760 | 52.500 | 80 | 38 | 0 | 91 | 170 | 185 | 264 | 7.06e-20 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017782.01.T01 | AT4G39230 | 66.667 | 135 | 45 | 0 | 91 | 225 | 174 | 308 | 4.62e-61 | 194 |
| MsG0380017782.01.T01 | AT4G39230 | 52.427 | 103 | 49 | 0 | 1 | 103 | 1 | 103 | 1.24e-29 | 112 |
| MsG0380017782.01.T01 | AT1G75290 | 60.448 | 134 | 53 | 0 | 91 | 224 | 177 | 310 | 5.48e-54 | 176 |
| MsG0380017782.01.T01 | AT1G75290 | 62.745 | 102 | 38 | 0 | 2 | 103 | 3 | 104 | 5.37e-36 | 129 |
| MsG0380017782.01.T01 | AT1G75290 | 60.448 | 134 | 53 | 0 | 91 | 224 | 204 | 337 | 1.19e-53 | 176 |
| MsG0380017782.01.T01 | AT1G75290 | 62.745 | 102 | 38 | 0 | 2 | 103 | 30 | 131 | 1.21e-35 | 129 |
| MsG0380017782.01.T01 | AT1G75280 | 61.194 | 134 | 51 | 1 | 91 | 224 | 177 | 309 | 2.44e-51 | 169 |
| MsG0380017782.01.T01 | AT1G75280 | 64.356 | 101 | 36 | 0 | 3 | 103 | 4 | 104 | 2.84e-37 | 132 |
| MsG0380017782.01.T01 | AT1G19540 | 55.556 | 135 | 60 | 0 | 91 | 225 | 176 | 310 | 4.93e-45 | 152 |
| MsG0380017782.01.T01 | AT1G19540 | 56.436 | 101 | 42 | 1 | 5 | 103 | 3 | 103 | 6.32e-29 | 110 |
| MsG0380017782.01.T01 | AT1G75300 | 54.478 | 134 | 58 | 1 | 91 | 224 | 191 | 321 | 4.79e-43 | 147 |
| MsG0380017782.01.T01 | AT1G75300 | 61.386 | 101 | 39 | 0 | 3 | 103 | 4 | 104 | 1.36e-35 | 128 |
| MsG0380017782.01.T01 | AT4G34540 | 49.286 | 140 | 71 | 0 | 86 | 225 | 167 | 306 | 1.48e-42 | 146 |
| MsG0380017782.01.T01 | AT4G34540 | 39.048 | 105 | 59 | 1 | 3 | 107 | 6 | 105 | 1.33e-18 | 82.8 |
| MsG0380017782.01.T01 | AT1G19540 | 56.436 | 101 | 42 | 1 | 5 | 103 | 3 | 103 | 4.65e-29 | 110 |
| MsG0380017782.01.T01 | AT1G19540 | 60.000 | 80 | 32 | 0 | 91 | 170 | 176 | 255 | 9.62e-24 | 95.9 |
| MsG0380017782.01.T01 | AT1G32100 | 38.525 | 122 | 73 | 1 | 104 | 225 | 198 | 317 | 5.66e-22 | 92.4 |
| MsG0380017782.01.T01 | AT4G13660 | 42.991 | 107 | 56 | 1 | 2 | 103 | 7 | 113 | 1.46e-21 | 91.3 |
| MsG0380017782.01.T01 | AT4G13660 | 39.344 | 122 | 72 | 1 | 104 | 225 | 198 | 317 | 9.03e-21 | 89.0 |
| MsG0380017782.01.T01 | AT4G13660 | 42.991 | 107 | 56 | 1 | 2 | 103 | 7 | 113 | 1.46e-21 | 91.3 |
| MsG0380017782.01.T01 | AT4G13660 | 39.344 | 122 | 72 | 1 | 104 | 225 | 198 | 317 | 9.03e-21 | 89.0 |
Find 60 sgRNAs with CRISPR-Local
Find 104 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACGACTATGGGTGTTAATT+TGG | 0.229530 | 3:+100602410 | MsG0380017782.01.T01:CDS |
| AACATTACCAGTCTCTTTAA+TGG | 0.235620 | 3:-100602656 | None:intergenic |
| TTTGAAATTGAGCCTTCTTT+TGG | 0.270403 | 3:+100603376 | MsG0380017782.01.T01:CDS |
| CCTCCACAATTTCACGACTA+TGG | 0.294665 | 3:+100602398 | MsG0380017782.01.T01:CDS |
| GTTGAATGAGTAAATGTTCT+TGG | 0.342329 | 3:-100603041 | None:intergenic |
| AAGAGCAAGATACTGATAAT+AGG | 0.365891 | 3:+100602264 | MsG0380017782.01.T01:CDS |
| GCCTTGTGGGAGAAGAAGAT+TGG | 0.369735 | 3:+100603073 | MsG0380017782.01.T01:CDS |
| TCACACACATGCTGCTGATC+AGG | 0.417659 | 3:+100602618 | MsG0380017782.01.T01:CDS |
| ATTGCTAATCCTACATTGTC+TGG | 0.420981 | 3:-100603316 | None:intergenic |
| TTGAATGAGTAAATGTTCTT+GGG | 0.442585 | 3:-100603040 | None:intergenic |
| AGAAGGCTCAATTTCAAAGT+TGG | 0.446737 | 3:-100603371 | None:intergenic |
| TAATAGAGGATATACTTCTC+AGG | 0.447457 | 3:+100603119 | MsG0380017782.01.T01:CDS |
| GTGGAGGAGCTTAGCCTTGG+TGG | 0.455960 | 3:-100602382 | None:intergenic |
| AGAGTGGTGTAGTTGACATC+CGG | 0.463970 | 3:-100603421 | None:intergenic |
| AATCCTACATTGTCTGGAAA+AGG | 0.466589 | 3:-100603310 | None:intergenic |
| CAACGATGTTATCGCCTTGT+GGG | 0.467739 | 3:+100603060 | MsG0380017782.01.T01:CDS |
| TGTGCAGTGGTCACGTGAAA+TGG | 0.475616 | 3:+100602236 | MsG0380017782.01.T01:exon |
| ATTCTCAAATGAAGTGATCA+AGG | 0.482223 | 3:-100603453 | None:intergenic |
| TTCAATAAGGAAGAAGACAT+TGG | 0.489749 | 3:+100602953 | MsG0380017782.01.T01:CDS |
| ATCGCTGCCATTAAAGAGAC+TGG | 0.495657 | 3:+100602649 | MsG0380017782.01.T01:CDS |
| CTCCACAATTTCACGACTAT+GGG | 0.495937 | 3:+100602399 | MsG0380017782.01.T01:CDS |
| CACCCATAGTCGTGAAATTG+TGG | 0.499376 | 3:-100602401 | None:intergenic |
| CCTTGTGGGAGAAGAAGATT+GGG | 0.523799 | 3:+100603074 | MsG0380017782.01.T01:CDS |
| CAAAGCAAAAGTGTGATGTC+CGG | 0.529364 | 3:-100602334 | None:intergenic |
| ATACTTCTCAGGGATATTGA+AGG | 0.530402 | 3:+100603130 | MsG0380017782.01.T01:CDS |
| GAAGCCTCAACCCCAAAAGA+AGG | 0.535959 | 3:-100603388 | None:intergenic |
| CCCAATCTTCTTCTCCCACA+AGG | 0.539941 | 3:-100603074 | None:intergenic |
| TCTCTACGATAATGAGAGCT+TGG | 0.541283 | 3:+100602552 | MsG0380017782.01.T01:CDS |
| AGCCTTGGTGGTGTCAGACA+TGG | 0.543413 | 3:-100602370 | None:intergenic |
| AGCAAGATACTGATAATAGG+AGG | 0.544862 | 3:+100602267 | MsG0380017782.01.T01:CDS |
| ATACTGATAATAGGAGGGAC+TGG | 0.546044 | 3:+100602273 | MsG0380017782.01.T01:CDS |
| TCAACGATGTTATCGCCTTG+TGG | 0.553409 | 3:+100603059 | MsG0380017782.01.T01:CDS |
| TACGAATAATGACAATTGCT+CGG | 0.554046 | 3:+100603649 | MsG0380017782.01.T01:three_prime_UTR |
| ATAGGAGGGACTGGCTACAT+TGG | 0.561131 | 3:+100602282 | MsG0380017782.01.T01:CDS |
| TGAGGCTTCTGCTTTATACC+CGG | 0.563811 | 3:+100603402 | MsG0380017782.01.T01:CDS |
| GAGTGGTGTAGTTGACATCC+GGG | 0.579953 | 3:-100603420 | None:intergenic |
| CGACAGAGGTGGATCAGTTG+TGG | 0.590006 | 3:-100603552 | None:intergenic |
| TATAGTAGAAGCAAGCGTAA+AGG | 0.592540 | 3:+100602311 | MsG0380017782.01.T01:CDS |
| AATGAGTAAATGTTCTTGGG+AGG | 0.600435 | 3:-100603037 | None:intergenic |
| TTAAAGCTGTGGATGATCCA+AGG | 0.604389 | 3:+100602987 | MsG0380017782.01.T01:CDS |
| AATAGAGGATATACTTCTCA+GGG | 0.608897 | 3:+100603120 | MsG0380017782.01.T01:CDS |
| GTAGAAGCAAGCGTAAAGGC+CGG | 0.610882 | 3:+100602315 | MsG0380017782.01.T01:CDS |
| ATTGTGGAGGAGCTTAGCCT+TGG | 0.614967 | 3:-100602385 | None:intergenic |
| GGATGTCAACTACACCACTC+TGG | 0.615304 | 3:+100603423 | MsG0380017782.01.T01:CDS |
| AACCTACACTATTAAAGCTG+TGG | 0.616425 | 3:+100602976 | MsG0380017782.01.T01:CDS |
| GCTCAATTTCAAAGTTGGTG+TGG | 0.619822 | 3:-100603366 | None:intergenic |
| ATCCACAGCTTTAATAGTGT+AGG | 0.637952 | 3:-100602978 | None:intergenic |
| AAATGTTCTTGGGAGGTCTG+AGG | 0.641726 | 3:-100603030 | None:intergenic |
| GCAAGATACTGATAATAGGA+GGG | 0.642290 | 3:+100602268 | MsG0380017782.01.T01:CDS |
| TAAGAAGCAATAAGCGACAG+AGG | 0.658226 | 3:-100603566 | None:intergenic |
| TGTCACTCAGTGTTTGTGAA+AGG | 0.666291 | 3:+100603340 | MsG0380017782.01.T01:CDS |
| TAGTCGGTGGTAACATACTG+AGG | 0.666775 | 3:-100603692 | None:intergenic |
| AGCAATGAAGCAAGTAGACG+TGG | 0.672283 | 3:+100602579 | MsG0380017782.01.T01:CDS |
| GAAGCAATAAGCGACAGAGG+TGG | 0.674095 | 3:-100603563 | None:intergenic |
| TGTCAACTACACCACTCTGG+AGG | 0.681149 | 3:+100603426 | MsG0380017782.01.T01:CDS |
| CCATAGTCGTGAAATTGTGG+AGG | 0.682789 | 3:-100602398 | None:intergenic |
| ATCAAGGCATTCCTCCAGAG+TGG | 0.685958 | 3:-100603437 | None:intergenic |
| AACCATGTCTGACACCACCA+AGG | 0.701081 | 3:+100602368 | MsG0380017782.01.T01:CDS |
| GCAGTGGTCACGTGAAATGG+CGG | 0.717575 | 3:+100602239 | MsG0380017782.01.T01:exon |
| GAGTGAGAAGAAGTGTGCAG+TGG | 0.743278 | 3:+100602223 | MsG0380017782.01.T01:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAATGTTTATATTTAAATA+TGG | + | Chr3:100603246-100603265 | MsG0380017782.01.T01:intron | 10.0% |
| !!! | TATTACATAAAATTTTTCAA+GGG | - | Chr3:100603104-100603123 | None:intergenic | 10.0% |
| !!! | AATCTTTAAAAAAAGAAACT+TGG | - | Chr3:100603625-100603644 | None:intergenic | 15.0% |
| !!! | CTATTACATAAAATTTTTCA+AGG | - | Chr3:100603105-100603124 | None:intergenic | 15.0% |
| !!! | TGAAAAATTTTATGTAATAG+AGG | + | Chr3:100603105-100603124 | MsG0380017782.01.T01:CDS | 15.0% |
| !!! | TGAACAGAATTTTATAAAAA+GGG | + | Chr3:100603200-100603219 | MsG0380017782.01.T01:intron | 15.0% |
| !!! | TTGAACAGAATTTTATAAAA+AGG | + | Chr3:100603199-100603218 | MsG0380017782.01.T01:intron | 15.0% |
| !! | AATATAAGGTAAATTAAGAG+TGG | - | Chr3:100602457-100602476 | None:intergenic | 20.0% |
| !! | ATATAAGGTAAATTAAGAGT+GGG | - | Chr3:100602456-100602475 | None:intergenic | 20.0% |
| !! | GAGTATAAAATTTATGAAGA+GGG | + | Chr3:100603222-100603241 | MsG0380017782.01.T01:intron | 20.0% |
| !! | TCGTGATATACTATAATATA+AGG | - | Chr3:100602471-100602490 | None:intergenic | 20.0% |
| !!! | CTTTGAATATCTATCTATTT+TGG | + | Chr3:100602753-100602772 | MsG0380017782.01.T01:intron | 20.0% |
| ! | AAAATATGCAAAAGAAGAAG+AGG | - | Chr3:100602696-100602715 | None:intergenic | 25.0% |
| ! | ATGCAAATTAAAATACAGTG+AGG | - | Chr3:100602907-100602926 | None:intergenic | 25.0% |
| ! | GGAGTATAAAATTTATGAAG+AGG | + | Chr3:100603221-100603240 | MsG0380017782.01.T01:intron | 25.0% |
| ! | TTGAATGAGTAAATGTTCTT+GGG | - | Chr3:100603043-100603062 | None:intergenic | 25.0% |
| !! | ATTAGAGTTTGAAATGAGAA+TGG | + | Chr3:100602515-100602534 | MsG0380017782.01.T01:intron | 25.0% |
| AACATTACCAGTCTCTTTAA+TGG | - | Chr3:100602659-100602678 | None:intergenic | 30.0% | |
| AAGAGCAAGATACTGATAAT+AGG | + | Chr3:100602264-100602283 | MsG0380017782.01.T01:CDS | 30.0% | |
| AATAGAGGATATACTTCTCA+GGG | + | Chr3:100603120-100603139 | MsG0380017782.01.T01:CDS | 30.0% | |
| ATTCTCAAATGAAGTGATCA+AGG | - | Chr3:100603456-100603475 | None:intergenic | 30.0% | |
| CTAGACAAAGTCATTATCTT+GGG | + | Chr3:100602782-100602801 | MsG0380017782.01.T01:intron | 30.0% | |
| CTCTAATATAGTAATATGCC+TGG | - | Chr3:100602502-100602521 | None:intergenic | 30.0% | |
| GTTGAATGAGTAAATGTTCT+TGG | - | Chr3:100603044-100603063 | None:intergenic | 30.0% | |
| TAATAGAGGATATACTTCTC+AGG | + | Chr3:100603119-100603138 | MsG0380017782.01.T01:CDS | 30.0% | |
| TACGAATAATGACAATTGCT+CGG | + | Chr3:100603649-100603668 | MsG0380017782.01.T01:three_prime_UTR | 30.0% | |
| TCTAGACAAAGTCATTATCT+TGG | + | Chr3:100602781-100602800 | MsG0380017782.01.T01:intron | 30.0% | |
| TTCAATAAGGAAGAAGACAT+TGG | + | Chr3:100602953-100602972 | MsG0380017782.01.T01:CDS | 30.0% | |
| ! | AGAATTTTGTTCAATGTCCT+TGG | - | Chr3:100603007-100603026 | None:intergenic | 30.0% |
| ! | TAAAGAGACTGGTAATGTTA+AGG | + | Chr3:100602660-100602679 | MsG0380017782.01.T01:intron | 30.0% |
| ! | TTGAAATTGAGCCTTCTTTT+GGG | + | Chr3:100603377-100603396 | MsG0380017782.01.T01:CDS | 30.0% |
| !! | TTTGAAATTGAGCCTTCTTT+TGG | + | Chr3:100603376-100603395 | MsG0380017782.01.T01:CDS | 30.0% |
| AAAGTCATTATCTTGGGTGA+TGG | + | Chr3:100602788-100602807 | MsG0380017782.01.T01:intron | 35.0% | |
| AACCTACACTATTAAAGCTG+TGG | + | Chr3:100602976-100602995 | MsG0380017782.01.T01:CDS | 35.0% | |
| AATCCTACATTGTCTGGAAA+AGG | - | Chr3:100603313-100603332 | None:intergenic | 35.0% | |
| AATGAGTAAATGTTCTTGGG+AGG | - | Chr3:100603040-100603059 | None:intergenic | 35.0% | |
| ACAGTGAGGTATGCAAATAT+TGG | - | Chr3:100602893-100602912 | None:intergenic | 35.0% | |
| AGAAGGCTCAATTTCAAAGT+TGG | - | Chr3:100603374-100603393 | None:intergenic | 35.0% | |
| AGCAAGATACTGATAATAGG+AGG | + | Chr3:100602267-100602286 | MsG0380017782.01.T01:CDS | 35.0% | |
| ATACTTCTCAGGGATATTGA+AGG | + | Chr3:100603130-100603149 | MsG0380017782.01.T01:CDS | 35.0% | |
| ATTGCTAATCCTACATTGTC+TGG | - | Chr3:100603319-100603338 | None:intergenic | 35.0% | |
| GCAAGATACTGATAATAGGA+GGG | + | Chr3:100602268-100602287 | MsG0380017782.01.T01:CDS | 35.0% | |
| TATAGTAGAAGCAAGCGTAA+AGG | + | Chr3:100602311-100602330 | MsG0380017782.01.T01:CDS | 35.0% | |
| TATATCACGAATGAACATCC+AGG | + | Chr3:100602481-100602500 | MsG0380017782.01.T01:intron | 35.0% | |
| TGCAAAAGAAGAAGAGGATA+AGG | - | Chr3:100602690-100602709 | None:intergenic | 35.0% | |
| ! | ATCCACAGCTTTAATAGTGT+AGG | - | Chr3:100602981-100603000 | None:intergenic | 35.0% |
| ! | GTTTGAAATGAGAATGGCAT+TGG | + | Chr3:100602521-100602540 | MsG0380017782.01.T01:intron | 35.0% |
| ! | TCACACTTTTGCTTTGGTTA+AGG | + | Chr3:100602341-100602360 | MsG0380017782.01.T01:CDS | 35.0% |
| ! | TGAAATTGAGCCTTCTTTTG+GGG | + | Chr3:100603378-100603397 | MsG0380017782.01.T01:CDS | 35.0% |
| ! | TGGGTGTTTGAAATCTTACA+TGG | - | Chr3:100602437-100602456 | None:intergenic | 35.0% |
| ! | TTGGGTGATGGCAATAAAAA+AGG | + | Chr3:100602800-100602819 | MsG0380017782.01.T01:intron | 35.0% |
| !! | ATGTGCAGCTGTTTTCAATA+AGG | + | Chr3:100602940-100602959 | MsG0380017782.01.T01:intron | 35.0% |
| !! | GTGGTTTAGTTCATGCATTT+TGG | + | Chr3:100602850-100602869 | MsG0380017782.01.T01:intron | 35.0% |
| ATACTGATAATAGGAGGGAC+TGG | + | Chr3:100602273-100602292 | MsG0380017782.01.T01:CDS | 40.0% | |
| CACGACTATGGGTGTTAATT+TGG | + | Chr3:100602410-100602429 | MsG0380017782.01.T01:CDS | 40.0% | |
| CTCCACAATTTCACGACTAT+GGG | + | Chr3:100602399-100602418 | MsG0380017782.01.T01:CDS | 40.0% | |
| TAAGAAGCAATAAGCGACAG+AGG | - | Chr3:100603569-100603588 | None:intergenic | 40.0% | |
| TCTCTACGATAATGAGAGCT+TGG | + | Chr3:100602552-100602571 | MsG0380017782.01.T01:CDS | 40.0% | |
| TGTCACTCAGTGTTTGTGAA+AGG | + | Chr3:100603340-100603359 | MsG0380017782.01.T01:CDS | 40.0% | |
| TTAAAGCTGTGGATGATCCA+AGG | + | Chr3:100602987-100603006 | MsG0380017782.01.T01:CDS | 40.0% | |
| TTAACCACTACTTCTACGCT+TGG | + | Chr3:100602828-100602847 | MsG0380017782.01.T01:intron | 40.0% | |
| TTCTCAGGGATATTGAAGGT+TGG | + | Chr3:100603134-100603153 | MsG0380017782.01.T01:intron | 40.0% | |
| ! | ACACCTTTTCCAGACAATGT+AGG | + | Chr3:100603307-100603326 | MsG0380017782.01.T01:CDS | 40.0% |
| ! | CAAAGCAAAAGTGTGATGTC+CGG | - | Chr3:100602337-100602356 | None:intergenic | 40.0% |
| !! | AAATGAGAATGGCATTGGCA+GGG | + | Chr3:100602526-100602545 | MsG0380017782.01.T01:intron | 40.0% |
| !! | GCTCAATTTCAAAGTTGGTG+TGG | - | Chr3:100603369-100603388 | None:intergenic | 40.0% |
| AAATGTTCTTGGGAGGTCTG+AGG | - | Chr3:100603033-100603052 | None:intergenic | 45.0% | |
| AGAGTGGTGTAGTTGACATC+CGG | - | Chr3:100603424-100603443 | None:intergenic | 45.0% | |
| AGCAATGAAGCAAGTAGACG+TGG | + | Chr3:100602579-100602598 | MsG0380017782.01.T01:CDS | 45.0% | |
| ATCGCTGCCATTAAAGAGAC+TGG | + | Chr3:100602649-100602668 | MsG0380017782.01.T01:CDS | 45.0% | |
| CAACGATGTTATCGCCTTGT+GGG | + | Chr3:100603060-100603079 | MsG0380017782.01.T01:CDS | 45.0% | |
| CACCCATAGTCGTGAAATTG+TGG | - | Chr3:100602404-100602423 | None:intergenic | 45.0% | |
| CCATAGTCGTGAAATTGTGG+AGG | - | Chr3:100602401-100602420 | None:intergenic | 45.0% | |
| CCTCCACAATTTCACGACTA+TGG | + | Chr3:100602398-100602417 | MsG0380017782.01.T01:CDS | 45.0% | |
| CCTTGTGGGAGAAGAAGATT+GGG | + | Chr3:100603074-100603093 | MsG0380017782.01.T01:CDS | 45.0% | |
| TAGTCGGTGGTAACATACTG+AGG | - | Chr3:100603695-100603714 | None:intergenic | 45.0% | |
| TCAACGATGTTATCGCCTTG+TGG | + | Chr3:100603059-100603078 | MsG0380017782.01.T01:CDS | 45.0% | |
| TGAGGCTTCTGCTTTATACC+CGG | + | Chr3:100603402-100603421 | MsG0380017782.01.T01:CDS | 45.0% | |
| ! | CGGACATCACACTTTTGCTT+TGG | + | Chr3:100602335-100602354 | MsG0380017782.01.T01:CDS | 45.0% |
| !! | AATGAGAATGGCATTGGCAG+GGG | + | Chr3:100602527-100602546 | MsG0380017782.01.T01:intron | 45.0% |
| !! | GAAATGAGAATGGCATTGGC+AGG | + | Chr3:100602525-100602544 | MsG0380017782.01.T01:intron | 45.0% |
| AACCATGTCTGACACCACCA+AGG | + | Chr3:100602368-100602387 | MsG0380017782.01.T01:CDS | 50.0% | |
| ACCACCAAGCGTAGAAGTAG+TGG | - | Chr3:100602835-100602854 | None:intergenic | 50.0% | |
| ACCACTACTTCTACGCTTGG+TGG | + | Chr3:100602831-100602850 | MsG0380017782.01.T01:intron | 50.0% | |
| ATTGTGGAGGAGCTTAGCCT+TGG | - | Chr3:100602388-100602407 | None:intergenic | 50.0% | |
| CCCAATCTTCTTCTCCCACA+AGG | - | Chr3:100603077-100603096 | None:intergenic | 50.0% | |
| GAAGCAATAAGCGACAGAGG+TGG | - | Chr3:100603566-100603585 | None:intergenic | 50.0% | |
| GAAGCCTCAACCCCAAAAGA+AGG | - | Chr3:100603391-100603410 | None:intergenic | 50.0% | |
| GAGTGGTGTAGTTGACATCC+GGG | - | Chr3:100603423-100603442 | None:intergenic | 50.0% | |
| GCCTTGTGGGAGAAGAAGAT+TGG | + | Chr3:100603073-100603092 | MsG0380017782.01.T01:CDS | 50.0% | |
| GGATGTCAACTACACCACTC+TGG | + | Chr3:100603423-100603442 | MsG0380017782.01.T01:CDS | 50.0% | |
| GTAGAAGCAAGCGTAAAGGC+CGG | + | Chr3:100602315-100602334 | MsG0380017782.01.T01:CDS | 50.0% | |
| TCACACACATGCTGCTGATC+AGG | + | Chr3:100602618-100602637 | MsG0380017782.01.T01:CDS | 50.0% | |
| TGTCAACTACACCACTCTGG+AGG | + | Chr3:100603426-100603445 | MsG0380017782.01.T01:CDS | 50.0% | |
| TGTGCAGTGGTCACGTGAAA+TGG | + | Chr3:100602236-100602255 | MsG0380017782.01.T01:exon | 50.0% | |
| ! | ATCAAGGCATTCCTCCAGAG+TGG | - | Chr3:100603440-100603459 | None:intergenic | 50.0% |
| ! | GAGTGAGAAGAAGTGTGCAG+TGG | + | Chr3:100602223-100602242 | MsG0380017782.01.T01:five_prime_UTR | 50.0% |
| !! | ATAGGAGGGACTGGCTACAT+TGG | + | Chr3:100602282-100602301 | MsG0380017782.01.T01:CDS | 50.0% |
| !! | ATGAGAATGGCATTGGCAGG+GGG | + | Chr3:100602528-100602547 | MsG0380017782.01.T01:intron | 50.0% |
| !!! | TGAGCCTTCTTTTGGGGTTG+AGG | + | Chr3:100603384-100603403 | MsG0380017782.01.T01:CDS | 50.0% |
| CGACAGAGGTGGATCAGTTG+TGG | - | Chr3:100603555-100603574 | None:intergenic | 55.0% | |
| GCAGTGGTCACGTGAAATGG+CGG | + | Chr3:100602239-100602258 | MsG0380017782.01.T01:exon | 55.0% | |
| !! | AGCCTTGGTGGTGTCAGACA+TGG | - | Chr3:100602373-100602392 | None:intergenic | 55.0% |
| !! | GTGGAGGAGCTTAGCCTTGG+TGG | - | Chr3:100602385-100602404 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 100602223 | 100603717 | 100602223 | ID=MsG0380017782.01;Name=MsG0380017782.01 |
| Chr3 | mRNA | 100602223 | 100603717 | 100602223 | ID=MsG0380017782.01.T01;Parent=MsG0380017782.01;Name=MsG0380017782.01.T01;_AED=0.40;_eAED=0.40;_QI=32|1|1|1|1|1|4|246|225 |
| Chr3 | exon | 100602223 | 100602437 | 100602223 | ID=MsG0380017782.01.T01:exon:2333;Parent=MsG0380017782.01.T01 |
| Chr3 | exon | 100602547 | 100602670 | 100602547 | ID=MsG0380017782.01.T01:exon:2334;Parent=MsG0380017782.01.T01 |
| Chr3 | exon | 100602948 | 100603151 | 100602948 | ID=MsG0380017782.01.T01:exon:2335;Parent=MsG0380017782.01.T01 |
| Chr3 | exon | 100603305 | 100603717 | 100603305 | ID=MsG0380017782.01.T01:exon:2336;Parent=MsG0380017782.01.T01 |
| Chr3 | five_prime_UTR | 100602223 | 100602254 | 100602223 | ID=MsG0380017782.01.T01:five_prime_utr;Parent=MsG0380017782.01.T01 |
| Chr3 | CDS | 100602255 | 100602437 | 100602255 | ID=MsG0380017782.01.T01:cds;Parent=MsG0380017782.01.T01 |
| Chr3 | CDS | 100602547 | 100602670 | 100602547 | ID=MsG0380017782.01.T01:cds;Parent=MsG0380017782.01.T01 |
| Chr3 | CDS | 100602948 | 100603151 | 100602948 | ID=MsG0380017782.01.T01:cds;Parent=MsG0380017782.01.T01 |
| Chr3 | CDS | 100603305 | 100603471 | 100603305 | ID=MsG0380017782.01.T01:cds;Parent=MsG0380017782.01.T01 |
| Chr3 | three_prime_UTR | 100603472 | 100603717 | 100603472 | ID=MsG0380017782.01.T01:three_prime_utr;Parent=MsG0380017782.01.T01 |
| Gene Sequence |
| Protein sequence |
