AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680032840.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680032840.01.T01 MTR_6g052360 97.471 435 11 0 14 448 25 459 0.0 879
MsG0680032840.01.T01 MTR_6g052360 95.100 449 20 1 14 462 25 471 0.0 879
MsG0680032840.01.T01 MTR_6g052360 93.796 274 15 1 189 462 1 272 0.0 516
MsG0680032840.01.T01 MTR_5g090150 24.870 386 216 12 69 450 65 380 6.66e-18 86.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680032840.01.T01 AT5G24060 44.949 396 186 9 60 447 27 398 1.96e-102 316
MsG0680032840.01.T01 AT5G24060 45.293 393 183 9 63 447 60 428 3.07e-102 316
MsG0680032840.01.T01 AT5G24060 45.385 390 181 9 66 447 50 415 9.54e-102 315
MsG0680032840.01.T01 AT3G49140 40.920 435 206 8 54 465 59 465 1.06e-90 286
MsG0680032840.01.T01 AT3G59300 27.095 358 195 10 93 447 97 391 6.46e-27 114
MsG0680032840.01.T01 AT3G59300 27.095 358 195 10 93 447 103 397 6.60e-27 114
MsG0680032840.01.T01 AT3G59300 25.634 355 171 12 93 447 97 358 2.80e-20 93.6

Find 107 sgRNAs with CRISPR-Local

Find 561 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTGTTACTTTACTAATTT+CGG 0.236432 6:-50802723 None:intergenic
TGTTGCTTTGGGTGATTTCT+TGG 0.257826 6:-50804561 None:intergenic
TGTTGCATTTAATCAATAAT+TGG 0.259415 6:+50804736 MsG0680032840.01.T01:three_prime_UTR
AACAATCTCCAATCTGTAAA+AGG 0.275206 6:-50802867 None:intergenic
CCATGTTCATCTGTCAAATA+TGG 0.298949 6:-50801341 None:intergenic
ACTTGCAGACTGGGCAAAAT+TGG 0.313686 6:+50802387 MsG0680032840.01.T01:CDS
AACGTTTATAAAATAAAATT+AGG 0.338659 6:-50804863 None:intergenic
TTGTTGTAGCAAGTCATAAT+TGG 0.349044 6:+50802037 MsG0680032840.01.T01:intron
GAAAGTGTTGGTGTGATTAA+TGG 0.350795 6:+50802755 MsG0680032840.01.T01:CDS
CTTCAGATGATCCAATTGAT+TGG 0.355755 6:+50802591 MsG0680032840.01.T01:CDS
TCTTCACAAGTTTGTTTCTC+CGG 0.373500 6:-50800235 None:intergenic
GATGTGAATGGTGGTGGATT+AGG 0.374841 6:+50796582 MsG0680032840.01.T01:CDS
AATTTCATGATAATATTGTT+TGG 0.377075 6:+50801309 MsG0680032840.01.T01:CDS
TCTGTCAAATATGGCAAATC+TGG 0.384390 6:-50801332 None:intergenic
AGTTTGTTTCTCCGGGGAAA+TGG 0.385331 6:-50800227 None:intergenic
TTTACTAATTTCGGCAGTAC+TGG 0.390296 6:-50802714 None:intergenic
TCGTGTAGTCTTCTACTTCA+AGG 0.390376 6:-50803424 None:intergenic
TTCGGCAGTACTGGATTGAT+TGG 0.396859 6:-50802705 None:intergenic
GCAGATATATGCTTCTGTAT+TGG 0.404519 6:-50802683 None:intergenic
GGCTGCTCCATCCAATCAAT+TGG 0.411923 6:-50802602 None:intergenic
GAGGCAGCTATTTCCTCAAA+TGG 0.417837 6:-50800335 None:intergenic
GTCCATCAGAAATTGACTTT+GGG 0.420188 6:+50802101 MsG0680032840.01.T01:CDS
CTCCGGGGAAATGGAGTGCT+CGG 0.429532 6:-50800218 None:intergenic
GGTCCATCAGAAATTGACTT+TGG 0.432825 6:+50802100 MsG0680032840.01.T01:CDS
TCACTTCTGTACACAATCAT+TGG 0.433362 6:-50804665 None:intergenic
TATTTCCTCAAATGGGTGAT+AGG 0.435060 6:-50800327 None:intergenic
CTTCACAAGTTTGTTTCTCC+GGG 0.437426 6:-50800234 None:intergenic
ATATCTCATTTGAAAGCTGC+TGG 0.447699 6:+50803488 MsG0680032840.01.T01:CDS
ATAAAATAAAATTAGGAGAC+AGG 0.448843 6:-50804856 None:intergenic
TTATCGTTTGCAGGAATGGC+TGG 0.453489 6:+50802318 MsG0680032840.01.T01:intron
AGATAACGCATCACAAAAGT+TGG 0.464677 6:+50802805 MsG0680032840.01.T01:CDS
ATGATGAAGCACTTGCAGAC+TGG 0.466540 6:+50802377 MsG0680032840.01.T01:CDS
TATCCAACAGAGAGACTTAA+GGG 0.466816 6:-50803534 None:intergenic
ATATCCAACAGAGAGACTTA+AGG 0.470097 6:-50803535 None:intergenic
TGATGAAGCACTTGCAGACT+GGG 0.472876 6:+50802378 MsG0680032840.01.T01:CDS
ATCTCTGAGATGGACTTGTC+AGG 0.489283 6:+50802079 MsG0680032840.01.T01:CDS
TTGTATGGCTTGTATGACTT+TGG 0.490843 6:+50804642 MsG0680032840.01.T01:CDS
ACGCAGGTCTTATAACTCCT+TGG 0.498828 6:-50802643 None:intergenic
TCCTCAAATGGGTGATAGGA+TGG 0.503275 6:-50800323 None:intergenic
AGATGATCCAATTGATTGGA+TGG 0.503955 6:+50802595 MsG0680032840.01.T01:CDS
TCCTACACCCATGCATTGCA+CGG 0.504474 6:-50805004 None:intergenic
GCGGAGGATGTGAATGGTGG+TGG 0.505698 6:+50796576 MsG0680032840.01.T01:CDS
GATGACCTTGCAATAGCATC+AGG 0.506785 6:-50803455 None:intergenic
CCTCCGCATTCCACGTTGAA+CGG 0.507316 6:-50796560 None:intergenic
ATTTAGACCCGTGCAATGCA+TGG 0.507502 6:+50804996 MsG0680032840.01.T01:three_prime_UTR
ACAACATCCTAGCTCAGATC+AGG 0.512194 6:+50800277 MsG0680032840.01.T01:CDS
TGAAAATGAAGATGAGAATG+AGG 0.513120 6:+50802189 MsG0680032840.01.T01:CDS
CCAGCTTGTGTAGTCTTCCA+AGG 0.514469 6:+50802626 MsG0680032840.01.T01:CDS
GTCTCTCTGTTGGATATGCA+AGG 0.527770 6:+50803541 MsG0680032840.01.T01:CDS
GGACTGCAAAATATCTTCAC+CGG 0.530976 6:-50801482 None:intergenic
ACAAGCCATACAAAATTTCA+CGG 0.532141 6:-50804632 None:intergenic
AGGCAGCTATTTCCTCAAAT+GGG 0.535456 6:-50800334 None:intergenic
TAAAAGGAAGTCTCGTCTGA+AGG 0.536320 6:-50802851 None:intergenic
CAACCTCATTGGAATGTGCA+TGG 0.536452 6:-50804704 None:intergenic
CATGGGTGTAGGAGATGTAA+AGG 0.537512 6:+50805014 MsG0680032840.01.T01:three_prime_UTR
ATCCCAAAGTCAATTTCTGA+TGG 0.545465 6:-50802103 None:intergenic
GAAAATAAAGAAGAAAGTGT+TGG 0.549548 6:+50802743 MsG0680032840.01.T01:CDS
TCCGGGGAAATGGAGTGCTC+GGG 0.549685 6:-50800217 None:intergenic
ACAGGCTCCTGATCTGAGCT+AGG 0.557261 6:-50800284 None:intergenic
GCCATCCTATCACCCATTTG+AGG 0.558341 6:+50800322 MsG0680032840.01.T01:CDS
CATAATTGGTGTGGATACCA+TGG 0.560333 6:+50802051 MsG0680032840.01.T01:CDS
TTGTGTACAGAAGTGAAGGC+AGG 0.560544 6:+50804672 MsG0680032840.01.T01:exon
AAGTTGGAAAATAATGAGAA+TGG 0.564533 6:+50802821 MsG0680032840.01.T01:CDS
AGAAATTGACTTTGGGATCG+AGG 0.565424 6:+50802108 MsG0680032840.01.T01:CDS
CCTTGGAAGACTACACAAGC+TGG 0.567061 6:-50802626 None:intergenic
ATCATACTTGCAGGCTACGT+CGG 0.568148 6:+50804500 MsG0680032840.01.T01:intron
CATCTCAGAGATCATTTCCA+TGG 0.568661 6:-50802068 None:intergenic
ACCCGAGCACTCCATTTCCC+CGG 0.572551 6:+50800216 MsG0680032840.01.T01:CDS
CATGGAAATGATCTCTGAGA+TGG 0.575487 6:+50802069 MsG0680032840.01.T01:CDS
GGTTAACAGCAAAGCAACAA+TGG 0.576380 6:+50801262 MsG0680032840.01.T01:intron
AAAAGGAAGTCTCGTCTGAA+GGG 0.577512 6:-50802850 None:intergenic
AACCTCATTGGAATGTGCAT+GGG 0.578014 6:-50804703 None:intergenic
CCATATTTGACAGATGAACA+TGG 0.584747 6:+50801341 MsG0680032840.01.T01:CDS
TTTAGACCCGTGCAATGCAT+GGG 0.585032 6:+50804997 MsG0680032840.01.T01:three_prime_UTR
GGAAATAGCTGCCTCCACAT+TGG 0.585698 6:+50800343 MsG0680032840.01.T01:CDS
ATGATTGTGTACAGAAGTGA+AGG 0.588464 6:+50804668 MsG0680032840.01.T01:CDS
TATATCATTGAGTTGTCTCT+CGG 0.590503 6:-50804532 None:intergenic
AAGCCCTTAAGTCTCTCTGT+TGG 0.591338 6:+50803531 MsG0680032840.01.T01:CDS
CCGTTCAACGTGGAATGCGG+AGG 0.602834 6:+50796560 MsG0680032840.01.T01:CDS
TGTAGACTTGCTTGTAGCTG+CGG 0.605572 6:+50796618 MsG0680032840.01.T01:CDS
TCTCTCTGTTGGATATGCAA+GGG 0.606977 6:+50803542 MsG0680032840.01.T01:CDS
GACTGCAAAATATCTTCACC+GGG 0.607488 6:-50801481 None:intergenic
TAACCGTTCAACGTGGAATG+CGG 0.613140 6:+50796557 MsG0680032840.01.T01:CDS
CAAGCCATACAAAATTTCAC+GGG 0.617286 6:-50804631 None:intergenic
TGTGTACAGAAGTGAAGGCA+GGG 0.619745 6:+50804673 MsG0680032840.01.T01:exon
CCCGTGCAATGCATGGGTGT+AGG 0.623205 6:+50805003 MsG0680032840.01.T01:three_prime_UTR
AGACTTGCTTGTAGCTGCGG+TGG 0.624358 6:+50796621 MsG0680032840.01.T01:CDS
TGGAATGCGGAGGATGTGAA+TGG 0.625238 6:+50796570 MsG0680032840.01.T01:CDS
AATGCGGAGGATGTGAATGG+TGG 0.626319 6:+50796573 MsG0680032840.01.T01:CDS
CTCAACCTGATGCTATTGCA+AGG 0.627135 6:+50803450 MsG0680032840.01.T01:CDS
CCTACACCCATGCATTGCAC+GGG 0.627991 6:-50805003 None:intergenic
GATATGCAAGGGTATTCAAG+TGG 0.638092 6:+50803553 MsG0680032840.01.T01:CDS
CTCACTAATCTCCAATGTGG+AGG 0.643018 6:-50800354 None:intergenic
ATGCAAGGGTATTCAAGTGG+AGG 0.645083 6:+50803556 MsG0680032840.01.T01:CDS
ATCCTCACTAATCTCCAATG+TGG 0.656177 6:-50800357 None:intergenic
GGGGTCGGCACAGGACAACA+AGG 0.658140 6:-50804785 None:intergenic
AACAAGTAGAACTGTTATCG+AGG 0.659990 6:+50800400 MsG0680032840.01.T01:CDS
TGAGAATGAGGATTATGACT+CGG 0.665245 6:+50802201 MsG0680032840.01.T01:CDS
TGACGATGAGCTTGACGATG+AGG 0.666584 6:+50802354 MsG0680032840.01.T01:CDS
CTCCACATTGGAGATTAGTG+AGG 0.667251 6:+50800355 MsG0680032840.01.T01:CDS
CAGATAATAACCGTTCAACG+TGG 0.668262 6:+50796550 MsG0680032840.01.T01:intron
GCGGTGGTTTCGACGCGCCG+TGG 0.668985 6:+50796637 MsG0680032840.01.T01:CDS
GGACAACAAGGAAGTAACAG+AGG 0.674207 6:-50804773 None:intergenic
GTCCCATGCACATTCCAATG+AGG 0.679481 6:+50804701 MsG0680032840.01.T01:three_prime_UTR
TTCACAAGTTTGTTTCTCCG+GGG 0.684542 6:-50800233 None:intergenic
GTAGCAAGTCATAATTGGTG+TGG 0.693744 6:+50802042 MsG0680032840.01.T01:intron
TGGAAGACTACACAAGCTGG+AGG 0.707383 6:-50802623 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAGAAAAAAAAGAAAA+AGG + Chr6:50799383-50799402 MsG0680032840.01.T01:intron 10.0%
!! AACGTTTATAAAATAAAATT+AGG - Chr6:50804866-50804885 None:intergenic 10.0%
!!! ATGGATATATTTAATTTAAA+AGG + Chr6:50803084-50803103 MsG0680032840.01.T01:intron 10.0%
!!! CATAATTTTAAAAAAACATT+AGG - Chr6:50798290-50798309 None:intergenic 10.0%
!!! CGATTTTATATAAAATATAT+AGG - Chr6:50804150-50804169 None:intergenic 10.0%
!!! GGTTATTTTTTTTATAATTT+TGG + Chr6:50798740-50798759 MsG0680032840.01.T01:intron 10.0%
!!! TGGATATATTTAATTTAAAA+GGG + Chr6:50803085-50803104 MsG0680032840.01.T01:intron 10.0%
!! AAAAAAGAAAAGGAATTAAT+TGG + Chr6:50797690-50797709 MsG0680032840.01.T01:intron 15.0%
!! AAGAAAAAAAAAACTATAAC+AGG + Chr6:50803126-50803145 MsG0680032840.01.T01:intron 15.0%
!! AATAAATTTGTAGTTAAAAG+AGG + Chr6:50804281-50804300 MsG0680032840.01.T01:intron 15.0%
!! AATTTCATGATAATATTGTT+TGG + Chr6:50801309-50801328 MsG0680032840.01.T01:CDS 15.0%
!! AGTTGTAAAAAGTTAAAAAT+TGG - Chr6:50798177-50798196 None:intergenic 15.0%
!! ATAAATTTGTAGTTAAAAGA+GGG + Chr6:50804282-50804301 MsG0680032840.01.T01:intron 15.0%
!! ATAATTTGATATAATTATGC+AGG + Chr6:50800177-50800196 MsG0680032840.01.T01:intron 15.0%
!! GTTGTAAAAAGTTAAAAATT+GGG - Chr6:50798176-50798195 None:intergenic 15.0%
!! TTAAGATTAAGATTAAGATT+TGG + Chr6:50797938-50797957 MsG0680032840.01.T01:intron 15.0%
!! TTGTAAAAAGTTAAAAATTG+GGG - Chr6:50798175-50798194 None:intergenic 15.0%
!! TTGTTCATATTTATTGATAT+TGG + Chr6:50803002-50803021 MsG0680032840.01.T01:intron 15.0%
!!! AAAAATGCATAAATTTTGTT+TGG + Chr6:50800976-50800995 MsG0680032840.01.T01:intron 15.0%
!!! AAAATTATTTTCTGAAGTTA+GGG - Chr6:50801506-50801525 None:intergenic 15.0%
!!! AATTAATTGGTTTTTTGAAA+AGG + Chr6:50797703-50797722 MsG0680032840.01.T01:intron 15.0%
!!! ATTAATTGGTTTTTTGAAAA+GGG + Chr6:50797704-50797723 MsG0680032840.01.T01:intron 15.0%
!!! GGATATATTTAATTTAAAAG+GGG + Chr6:50803086-50803105 MsG0680032840.01.T01:intron 15.0%
!!! GGTATTAACATTTTTAAATA+AGG + Chr6:50800706-50800725 MsG0680032840.01.T01:intron 15.0%
!!! TATTTATTCTAAGAAATATG+AGG + Chr6:50803275-50803294 MsG0680032840.01.T01:intron 15.0%
!!! TTAAAAATGTTAATACCTTT+TGG - Chr6:50800703-50800722 None:intergenic 15.0%
!!! TTACAAAACTTCATAATTTT+GGG + Chr6:50804338-50804357 MsG0680032840.01.T01:intron 15.0%
!!! TTGTTTTTAATGTAATTATG+AGG + Chr6:50802237-50802256 MsG0680032840.01.T01:intron 15.0%
!!! TTTACAAAACTTCATAATTT+TGG + Chr6:50804337-50804356 MsG0680032840.01.T01:intron 15.0%
!!! TTTTAAAAAAACATTAGGTA+CGG - Chr6:50798285-50798304 None:intergenic 15.0%
!! AAAAGTTTATCTCAACAAAT+CGG - Chr6:50799564-50799583 None:intergenic 20.0%
!! AAATGCTAAAACCATAATTA+GGG + Chr6:50800607-50800626 MsG0680032840.01.T01:intron 20.0%
!! AAGTACGAGATAAAAAAAAA+GGG - Chr6:50798502-50798521 None:intergenic 20.0%
!! AATAAAATTTGGCAAACATT+TGG + Chr6:50800447-50800466 MsG0680032840.01.T01:intron 20.0%
!! ACTGTTTGATAAAAAAGAAA+AGG + Chr6:50797680-50797699 MsG0680032840.01.T01:intron 20.0%
!! AGAATTAAGATTAGAACAAA+AGG - Chr6:50801953-50801972 None:intergenic 20.0%
!! AGATAAATAGGAGATTAAAT+TGG + Chr6:50800780-50800799 MsG0680032840.01.T01:intron 20.0%
!! AGTATCATATGATGATTTAA+GGG + Chr6:50798876-50798895 MsG0680032840.01.T01:intron 20.0%
!! ATAAAATAAAATTAGGAGAC+AGG - Chr6:50804859-50804878 None:intergenic 20.0%
!! CAAAACAAAGAAAAATACAA+TGG - Chr6:50800806-50800825 None:intergenic 20.0%
!! CTAATAACAACAAAAATGAT+AGG - Chr6:50796681-50796700 None:intergenic 20.0%
!! GTAGATAATTACAGATAAAT+AGG + Chr6:50800768-50800787 MsG0680032840.01.T01:intron 20.0%
!! TAAATGCTAAAACCATAATT+AGG + Chr6:50800606-50800625 MsG0680032840.01.T01:intron 20.0%
!! TAAATTTGTAGTTAAAAGAG+GGG + Chr6:50804283-50804302 MsG0680032840.01.T01:intron 20.0%
!! TAATGAGAAAACTTTCTTAA+TGG - Chr6:50803710-50803729 None:intergenic 20.0%
!! TAGTATCATATGATGATTTA+AGG + Chr6:50798875-50798894 MsG0680032840.01.T01:intron 20.0%
!! TGAAGTTATGAAAATTAGTT+TGG + Chr6:50796908-50796927 MsG0680032840.01.T01:intron 20.0%
!! TGTAAACCTAGAAAAAAAAA+AGG - Chr6:50800739-50800758 None:intergenic 20.0%
!! TGTTGCATTTAATCAATAAT+TGG + Chr6:50804736-50804755 MsG0680032840.01.T01:three_prime_UTR 20.0%
!! TTAACTACAAGAAAAAAATG+AGG - Chr6:50799248-50799267 None:intergenic 20.0%
!! TTTAAAAAAACATTAGGTAC+GGG - Chr6:50798284-50798303 None:intergenic 20.0%
!!! AACTTCAGAAAATAATTTTG+TGG + Chr6:50801507-50801526 MsG0680032840.01.T01:CDS 20.0%
!!! AATTTTTTAGCAAAATCCAT+TGG - Chr6:50802433-50802452 None:intergenic 20.0%
!!! ATCATCTTAGGTTTTTATAT+TGG + Chr6:50799869-50799888 MsG0680032840.01.T01:intron 20.0%
!!! ATTACATTAACTTGTACTTT+TGG - Chr6:50803741-50803760 None:intergenic 20.0%
!!! CAAAATTATTTTCTGAAGTT+AGG - Chr6:50801507-50801526 None:intergenic 20.0%
!!! CAGTATTTTCTAAAATGAAA+CGG - Chr6:50800636-50800655 None:intergenic 20.0%
!!! CTTCATTGTGTTTAAAATTT+GGG + Chr6:50804366-50804385 MsG0680032840.01.T01:intron 20.0%
!!! GATTTTCATATATAAGAATC+AGG + Chr6:50797301-50797320 MsG0680032840.01.T01:intron 20.0%
!!! TATGAAAATTAGTTTGGTTA+TGG + Chr6:50796914-50796933 MsG0680032840.01.T01:intron 20.0%
!!! TATTTATACCTTTTCTTTGT+TGG + Chr6:50803366-50803385 MsG0680032840.01.T01:intron 20.0%
!!! TCATCTTAGGTTTTTATATT+GGG + Chr6:50799870-50799889 MsG0680032840.01.T01:intron 20.0%
!!! TCATTTTTTTCTTGTAGTTA+AGG + Chr6:50799247-50799266 MsG0680032840.01.T01:intron 20.0%
!!! TTCTGTTACTTTACTAATTT+CGG - Chr6:50802726-50802745 None:intergenic 20.0%
!!! TTGTTGTTATTAGAGTTTAA+TGG + Chr6:50796688-50796707 MsG0680032840.01.T01:intron 20.0%
!!! TTGTTTTGAGAATTTGAATT+GGG + Chr6:50799582-50799601 MsG0680032840.01.T01:intron 20.0%
!!! TTTGAAATAGTTTTGTGATT+TGG + Chr6:50796792-50796811 MsG0680032840.01.T01:intron 20.0%
!!! TTTGTTTTGAGAATTTGAAT+TGG + Chr6:50799581-50799600 MsG0680032840.01.T01:intron 20.0%
! AAAGTTTGCATATCTTAACA+AGG + Chr6:50801993-50802012 MsG0680032840.01.T01:intron 25.0%
! AAGTTGGAAAATAATGAGAA+TGG + Chr6:50802821-50802840 MsG0680032840.01.T01:CDS 25.0%
! AATAGAGAATATCTGCATTA+TGG + Chr6:50800939-50800958 MsG0680032840.01.T01:intron 25.0%
! AATGAACATCAAGAAAATGA+AGG - Chr6:50801751-50801770 None:intergenic 25.0%
! AATGCAGATATTCTCTATTA+GGG - Chr6:50800938-50800957 None:intergenic 25.0%
! AATGCCATTAATATAAGAAC+AGG - Chr6:50801703-50801722 None:intergenic 25.0%
! AATTATTGTTGAAGTCCAAA+AGG - Chr6:50801802-50801821 None:intergenic 25.0%
! AATTTAGTGACTGCTTTAAT+TGG + Chr6:50803038-50803057 MsG0680032840.01.T01:intron 25.0%
! ACAGTTAAATAACAATACCA+CGG - Chr6:50796657-50796676 None:intergenic 25.0%
! ACGTAAAAATAGTGAGATTT+AGG + Chr6:50804210-50804229 MsG0680032840.01.T01:intron 25.0%
! ACTGTTTGTAAGTATTTCAT+AGG - Chr6:50801575-50801594 None:intergenic 25.0%
! ACTTAATATATCATACTTGC+AGG + Chr6:50804491-50804510 MsG0680032840.01.T01:intron 25.0%
! ACTTGTAAAATGTTGAAGTA+CGG + Chr6:50796993-50797012 MsG0680032840.01.T01:intron 25.0%
! AGAAATGATCAAATACCATT+GGG + Chr6:50803875-50803894 MsG0680032840.01.T01:intron 25.0%
! ATGCCATTAATATAAGAACA+GGG - Chr6:50801702-50801721 None:intergenic 25.0%
! CAAGTACGAGATAAAAAAAA+AGG - Chr6:50798503-50798522 None:intergenic 25.0%
! CACAAGGAGAAAATAAAATT+TGG + Chr6:50800436-50800455 MsG0680032840.01.T01:intron 25.0%
! CATACTCAGTTAAGAAATAA+TGG + Chr6:50803065-50803084 MsG0680032840.01.T01:intron 25.0%
! CATATTCAATAAGTCAAAAC+AGG - Chr6:50800890-50800909 None:intergenic 25.0%
! CGTAAAAATAGTGAGATTTA+GGG + Chr6:50804211-50804230 MsG0680032840.01.T01:intron 25.0%
! CTCCTTACTACAAAATTTAT+AGG - Chr6:50797178-50797197 None:intergenic 25.0%
! CTCTTAATTCATAACTCAAT+TGG + Chr6:50803227-50803246 MsG0680032840.01.T01:intron 25.0%
! CTGAAAGTTTAAATAACACA+TGG - Chr6:50800832-50800851 None:intergenic 25.0%
! GAAATACTATATGTAATGAG+AGG + Chr6:50800148-50800167 MsG0680032840.01.T01:intron 25.0%
! GAGAAACTATGACTTATTAA+AGG + Chr6:50803831-50803850 MsG0680032840.01.T01:intron 25.0%
! GGAAAATCAATACATAGTAT+AGG - Chr6:50801392-50801411 None:intergenic 25.0%
! GTCTTGAAAAATGAAAATGT+AGG - Chr6:50797567-50797586 None:intergenic 25.0%
! TAATATTGGATATCATGTAG+TGG + Chr6:50797731-50797750 MsG0680032840.01.T01:intron 25.0%
! TAATGCAGATATTCTCTATT+AGG - Chr6:50800939-50800958 None:intergenic 25.0%
! TAGAAATGATCAAATACCAT+TGG + Chr6:50803874-50803893 MsG0680032840.01.T01:intron 25.0%
! TAGTTCAAAATACACATCAA+AGG + Chr6:50797470-50797489 MsG0680032840.01.T01:intron 25.0%
! TGGTTTATGATCAAACATTA+TGG + Chr6:50797985-50798004 MsG0680032840.01.T01:intron 25.0%
! TGTTAATGTAACCTAATTTG+TGG + Chr6:50802465-50802484 MsG0680032840.01.T01:intron 25.0%
! TTATTCATATTATCGTTTGC+AGG + Chr6:50802309-50802328 MsG0680032840.01.T01:intron 25.0%
! TTATTGAATATGCGTAAGTT+GGG + Chr6:50800898-50800917 MsG0680032840.01.T01:intron 25.0%
! TTGAAAAGGGAGTTTAATAT+TGG + Chr6:50797717-50797736 MsG0680032840.01.T01:intron 25.0%
! TTTGTTAATTCATTTCTCTC+AGG - Chr6:50800060-50800079 None:intergenic 25.0%
!! AAAAAAAGTACAACAAGTAC+CGG - Chr6:50797035-50797054 None:intergenic 25.0%
!! AAAACTATTTTACACTGTCA+AGG + Chr6:50796847-50796866 MsG0680032840.01.T01:intron 25.0%
!! AAAATGTTAATACCTTTTGG+AGG - Chr6:50800700-50800719 None:intergenic 25.0%
!! AATAATTTTGTGGTAAGACT+AGG + Chr6:50801517-50801536 MsG0680032840.01.T01:intron 25.0%
!! ACCATTGATGTCAAAATTTT+AGG - Chr6:50803177-50803196 None:intergenic 25.0%
!! ATAAATTTTGTAGTAAGGAG+AGG + Chr6:50797178-50797197 MsG0680032840.01.T01:intron 25.0%
!! ATCTGAAATCAGATATATGA+AGG - Chr6:50804423-50804442 None:intergenic 25.0%
!! ATTTAATATCCTCACACTTT+TGG + Chr6:50801819-50801838 MsG0680032840.01.T01:intron 25.0%
!! CATGTAATTTTCTTACATGA+AGG + Chr6:50800563-50800582 MsG0680032840.01.T01:intron 25.0%
!! CTTAAGTGTTGTAAAAAGAA+TGG - Chr6:50803930-50803949 None:intergenic 25.0%
!! GAAAATAAAGAAGAAAGTGT+TGG + Chr6:50802743-50802762 MsG0680032840.01.T01:CDS 25.0%
!! GACCTATAAATTTTGTAGTA+AGG + Chr6:50797173-50797192 MsG0680032840.01.T01:intron 25.0%
!! GCTTCATTGTGTTTAAAATT+TGG + Chr6:50804365-50804384 MsG0680032840.01.T01:intron 25.0%
!! TAATGAGTTGAATCGAAATA+TGG + Chr6:50797965-50797984 MsG0680032840.01.T01:intron 25.0%
!! TCATCAACAGAATTTTTACT+CGG - Chr6:50798583-50798602 None:intergenic 25.0%
!! TGCTTGTTTAGAATTCATTT+AGG + Chr6:50800666-50800685 MsG0680032840.01.T01:intron 25.0%
!! TTTAATATCCTCACACTTTT+GGG + Chr6:50801820-50801839 MsG0680032840.01.T01:intron 25.0%
!! TTTAGTTTCCAACAAAGAAA+AGG - Chr6:50803377-50803396 None:intergenic 25.0%
!! TTTTCAGAACCCTAAAAAAA+GGG + Chr6:50797862-50797881 MsG0680032840.01.T01:intron 25.0%
!! TTTTCTGTTGCACTTTTATT+CGG + Chr6:50802513-50802532 MsG0680032840.01.T01:intron 25.0%
!! TTTTGCTAAAAAATTGACTG+AGG + Chr6:50802438-50802457 MsG0680032840.01.T01:CDS 25.0%
!!! ACCTAAAATTTTGACATCAA+TGG + Chr6:50803173-50803192 MsG0680032840.01.T01:intron 25.0%
!!! AGAACACCTTTTTTTTTTCT+AGG + Chr6:50800730-50800749 MsG0680032840.01.T01:intron 25.0%
!!! TCCTCTATTTTGATGATTTA+GGG + Chr6:50796884-50796903 MsG0680032840.01.T01:intron 25.0%
!!! TTTTTCAGAACCCTAAAAAA+AGG + Chr6:50797861-50797880 MsG0680032840.01.T01:intron 25.0%
!!! TTTTTTCTAGGTTTACAGTT+GGG + Chr6:50800742-50800761 MsG0680032840.01.T01:intron 25.0%
!!! TTTTTTTCTAGGTTTACAGT+TGG + Chr6:50800741-50800760 MsG0680032840.01.T01:intron 25.0%
AAAAAGAAAAAGGTTTCTGC+AGG + Chr6:50799393-50799412 MsG0680032840.01.T01:intron 30.0%
AAAAGTAGACATGTACTTTG+AGG + Chr6:50801649-50801668 MsG0680032840.01.T01:intron 30.0%
AAACTGTAAGTATGTGAGAA+TGG - Chr6:50801607-50801626 None:intergenic 30.0%
AAATCTTGGATGAAAGTTCT+TGG - Chr6:50799998-50800017 None:intergenic 30.0%
AACAATCTCCAATCTGTAAA+AGG - Chr6:50802870-50802889 None:intergenic 30.0%
AATCTTGGATGAAAGTTCTT+GGG - Chr6:50799997-50800016 None:intergenic 30.0%
AATTACATGCTTTGTAGCAT+AGG - Chr6:50800552-50800571 None:intergenic 30.0%
AATTCTGTCAAAAGAAACAG+TGG - Chr6:50801028-50801047 None:intergenic 30.0%
ACAAATGTCAAGTGTGTTAA+TGG + Chr6:50799110-50799129 MsG0680032840.01.T01:intron 30.0%
ACAAGCCATACAAAATTTCA+CGG - Chr6:50804635-50804654 None:intergenic 30.0%
ACTCTCTACAAACTATAATC+AGG + Chr6:50799937-50799956 MsG0680032840.01.T01:intron 30.0%
AGTTGCAATGTAATTGAAGT+TGG + Chr6:50798926-50798945 MsG0680032840.01.T01:intron 30.0%
ATATGAAGATGAAGGATGAA+AGG - Chr6:50801096-50801115 None:intergenic 30.0%
ATGATTTAAGGGTGAACTTA+TGG + Chr6:50798887-50798906 MsG0680032840.01.T01:intron 30.0%
ATGGTAAATTGTGACTTCTT+AGG + Chr6:50799148-50799167 MsG0680032840.01.T01:intron 30.0%
ATTTGAGTGTGTATGGAAAA+TGG - Chr6:50799046-50799065 None:intergenic 30.0%
CAAAAATTACACAACCTCAT+TGG - Chr6:50804718-50804737 None:intergenic 30.0%
CCAGATTTATATGAAGATGA+AGG - Chr6:50801104-50801123 None:intergenic 30.0%
CCTTCATCTTCATATAAATC+TGG + Chr6:50801101-50801120 MsG0680032840.01.T01:intron 30.0%
CTAACTCATCCTTACAAAAT+CGG + Chr6:50799894-50799913 MsG0680032840.01.T01:intron 30.0%
CTTATTGAATATGCGTAAGT+TGG + Chr6:50800897-50800916 MsG0680032840.01.T01:intron 30.0%
GAAATGATCAAATACCATTG+GGG + Chr6:50803876-50803895 MsG0680032840.01.T01:intron 30.0%
GAATAAATAAGCCAGCAAAT+AGG - Chr6:50803264-50803283 None:intergenic 30.0%
GAGTAAAAATTCTGTTGATG+AGG + Chr6:50798582-50798601 MsG0680032840.01.T01:intron 30.0%
TACTAAGAATCACTGTAAGA+CGG - Chr6:50798860-50798879 None:intergenic 30.0%
TAGGAAAAATGAGGAAGAAA+TGG + Chr6:50797595-50797614 MsG0680032840.01.T01:intron 30.0%
TATGTAGTGTTATAACGCTT+GGG - Chr6:50799650-50799669 None:intergenic 30.0%
TATGTATTTCGTACTTGTGA+GGG + Chr6:50798306-50798325 MsG0680032840.01.T01:intron 30.0%
TCAATTGAGCAAACAAATCA+TGG - Chr6:50801888-50801907 None:intergenic 30.0%
TCATTATTCTGTTGTGAGTA+AGG + Chr6:50797058-50797077 MsG0680032840.01.T01:intron 30.0%
TCCCACATTGATAAAAGATA+AGG - Chr6:50799963-50799982 None:intergenic 30.0%
TGAAAATGAAGATGAGAATG+AGG + Chr6:50802189-50802208 MsG0680032840.01.T01:CDS 30.0%
TGACCCTGTTCTTATATTAA+TGG + Chr6:50801696-50801715 MsG0680032840.01.T01:intron 30.0%
TGCATATCTTAACAAGGTTA+TGG + Chr6:50801999-50802018 MsG0680032840.01.T01:intron 30.0%
TGCTACAAACATTCTTATTC+CGG - Chr6:50803797-50803816 None:intergenic 30.0%
TGGATACTTAAGGAAAGATT+AGG + Chr6:50796948-50796967 MsG0680032840.01.T01:intron 30.0%
TGTGAATTTGTGGATACTTA+AGG + Chr6:50796938-50796957 MsG0680032840.01.T01:intron 30.0%
TTATGTATTTCGTACTTGTG+AGG + Chr6:50798305-50798324 MsG0680032840.01.T01:intron 30.0%
TTCAACCATATAAGCCTAAA+AGG + Chr6:50797538-50797557 MsG0680032840.01.T01:intron 30.0%
TTGGGTTTGTGAAAAACTAT+TGG + Chr6:50799013-50799032 MsG0680032840.01.T01:intron 30.0%
TTGTTGTAGCAAGTCATAAT+TGG + Chr6:50802037-50802056 MsG0680032840.01.T01:intron 30.0%
! ACCTTGCACTCAATTTTTAT+CGG - Chr6:50799451-50799470 None:intergenic 30.0%
! ATGCAAATTTTGTGACTTCT+TGG + Chr6:50800079-50800098 MsG0680032840.01.T01:intron 30.0%
! GAATAAAAGTGCAACAGAAA+AGG - Chr6:50802514-50802533 None:intergenic 30.0%
! GAATTTTCTTCAATAAACGC+AGG - Chr6:50802662-50802681 None:intergenic 30.0%
! GCCTTATCTTTTATCAATGT+GGG + Chr6:50799959-50799978 MsG0680032840.01.T01:intron 30.0%
! GTAGTTAAGGTATTTGAGTT+CGG + Chr6:50799260-50799279 MsG0680032840.01.T01:intron 30.0%
! GTATTTGAGTTTCTTTGTTG+TGG + Chr6:50798142-50798161 MsG0680032840.01.T01:intron 30.0%
! GTTTCTCAGATAGTTTTTCT+AGG - Chr6:50797233-50797252 None:intergenic 30.0%
! TATATCATTGAGTTGTCTCT+CGG - Chr6:50804535-50804554 None:intergenic 30.0%
! TGATTATAGTTTGTAGAGAG+TGG - Chr6:50799938-50799957 None:intergenic 30.0%
! TGCACTTTTATTCGGTTTAT+TGG + Chr6:50802521-50802540 MsG0680032840.01.T01:intron 30.0%
! TGTTGATTACAATTCATTGC+AGG + Chr6:50803992-50804011 MsG0680032840.01.T01:intron 30.0%
! TTAGACTGTTGAGCTTTATA+TGG + Chr6:50799519-50799538 MsG0680032840.01.T01:intron 30.0%
! TTTCAAAGTAATGTCACTTC+AGG - Chr6:50800022-50800041 None:intergenic 30.0%
!! AATGTGTTTCTAGAAGTAGA+TGG - Chr6:50799293-50799312 None:intergenic 30.0%
!! AATTATGACTTGCTACAACA+AGG - Chr6:50802038-50802057 None:intergenic 30.0%
!! AGGTACTAATTTGTTTCACA+AGG + Chr6:50800420-50800439 MsG0680032840.01.T01:intron 30.0%
!! AGTATTTCTAGACACATGAA+AGG - Chr6:50800136-50800155 None:intergenic 30.0%
!! ATATATTTTCAAGCAAAGCC+CGG + Chr6:50801463-50801482 MsG0680032840.01.T01:CDS 30.0%
!! ATGCTTTGAAATATCCAACA+TGG + Chr6:50797799-50797818 MsG0680032840.01.T01:intron 30.0%
!! ATGGTTGATTTGAATTCAGA+TGG + Chr6:50799129-50799148 MsG0680032840.01.T01:intron 30.0%
!! ATTATGACTTGCTACAACAA+GGG - Chr6:50802037-50802056 None:intergenic 30.0%
!! GATTGTGGCATATCATTTTT+AGG + Chr6:50801241-50801260 MsG0680032840.01.T01:intron 30.0%
!!! ATAATTTTGGGGTGAAATTG+TGG + Chr6:50798753-50798772 MsG0680032840.01.T01:intron 30.0%
!!! CCTCTATTTTGATGATTTAG+GGG + Chr6:50796885-50796904 MsG0680032840.01.T01:intron 30.0%
!!! CTCCTCTATTTTGATGATTT+AGG + Chr6:50796883-50796902 MsG0680032840.01.T01:intron 30.0%
!!! GAAATAGTTTTGTGATTTGG+CGG + Chr6:50796795-50796814 MsG0680032840.01.T01:intron 30.0%
!!! GTATTGATTTTCCTGTTCTT+GGG + Chr6:50801399-50801418 MsG0680032840.01.T01:intron 30.0%
!!! TGGAAAGGTTATTTTGACAT+TGG + Chr6:50798656-50798675 MsG0680032840.01.T01:intron 30.0%
!!! TGTATTGATTTTCCTGTTCT+TGG + Chr6:50801398-50801417 MsG0680032840.01.T01:intron 30.0%
!!! TGTCTACTTTTTAGAGTAGA+AGG - Chr6:50801640-50801659 None:intergenic 30.0%
!!! TTTTTCAAGACATATGTCGT+AGG + Chr6:50797576-50797595 MsG0680032840.01.T01:intron 30.0%
AAAAAACATTAGGTACGGGT+AGG - Chr6:50798280-50798299 None:intergenic 35.0%
AAACTCACCATACCTAGATT+CGG + Chr6:50801673-50801692 MsG0680032840.01.T01:intron 35.0%
AAAGAATGGAACAGATGACA+AGG - Chr6:50803916-50803935 None:intergenic 35.0%
AAAGGTTTCTGCAGGTTTAT+AGG + Chr6:50799401-50799420 MsG0680032840.01.T01:intron 35.0%
AAAGTGCAATGATCAACCTT+AGG - Chr6:50802984-50803003 None:intergenic 35.0%
AACAAGTAGAACTGTTATCG+AGG + Chr6:50800400-50800419 MsG0680032840.01.T01:CDS 35.0%
AATCTAAACCCAAAAGTCTG+CGG - Chr6:50797629-50797648 None:intergenic 35.0%
ACCATTTAACTGTGGAAACT+AGG - Chr6:50803653-50803672 None:intergenic 35.0%
ACCTTTCCAGAATCTTTACT+CGG - Chr6:50798645-50798664 None:intergenic 35.0%
ACGTAGCTCGTATTTGTATT+AGG - Chr6:50804194-50804213 None:intergenic 35.0%
AGATAACGCATCACAAAAGT+TGG + Chr6:50802805-50802824 MsG0680032840.01.T01:CDS 35.0%
AGATGATCCAATTGATTGGA+TGG + Chr6:50802595-50802614 MsG0680032840.01.T01:CDS 35.0%
AGCTCGTTCGAAATAAAAAG+TGG + Chr6:50804244-50804263 MsG0680032840.01.T01:intron 35.0%
AGTTGTATGACATAGCAGAT+TGG - Chr6:50796767-50796786 None:intergenic 35.0%
ATAATATGGGATCGTCTACA+TGG - Chr6:50798022-50798041 None:intergenic 35.0%
ATACAAGTCAGCTAACTTAC+GGG - Chr6:50802923-50802942 None:intergenic 35.0%
ATATCCAACAGAGAGACTTA+AGG - Chr6:50803538-50803557 None:intergenic 35.0%
ATATCTCATTTGAAAGCTGC+TGG + Chr6:50803488-50803507 MsG0680032840.01.T01:CDS 35.0%
ATATTATCAACACTGAACCC+TGG - Chr6:50803311-50803330 None:intergenic 35.0%
ATCCCAAAGTCAATTTCTGA+TGG - Chr6:50802106-50802125 None:intergenic 35.0%
ATGAACATGGAAGTAAGTGA+TGG + Chr6:50801354-50801373 MsG0680032840.01.T01:intron 35.0%
ATGATTGTGTACAGAAGTGA+AGG + Chr6:50804668-50804687 MsG0680032840.01.T01:CDS 35.0%
ATGTAGACGATCCCATATTA+TGG + Chr6:50798021-50798040 MsG0680032840.01.T01:intron 35.0%
ATGTATTTCGTACTTGTGAG+GGG + Chr6:50798307-50798326 MsG0680032840.01.T01:intron 35.0%
ATGTGACATCAGTTGAGAAA+TGG - Chr6:50802271-50802290 None:intergenic 35.0%
ATTGATCACCAACTGTAACA+TGG - Chr6:50803973-50803992 None:intergenic 35.0%
CAAGCCATACAAAATTTCAC+GGG - Chr6:50804634-50804653 None:intergenic 35.0%
CAAGCGTTATAACACTACAT+AGG + Chr6:50799649-50799668 MsG0680032840.01.T01:intron 35.0%
CAAGTCTTTGCCCATAATAT+GGG - Chr6:50798035-50798054 None:intergenic 35.0%
CAAGTTCAAACACTGAGATT+CGG + Chr6:50804074-50804093 MsG0680032840.01.T01:intron 35.0%
CAGAAAAGATGGTAGAAAAC+AGG + Chr6:50797122-50797141 MsG0680032840.01.T01:intron 35.0%
CATACAAGTCAGCTAACTTA+CGG - Chr6:50802924-50802943 None:intergenic 35.0%
CATATGTCGTAGGAAAAATG+AGG + Chr6:50797586-50797605 MsG0680032840.01.T01:intron 35.0%
CATATTATCGTTTGCAGGAA+TGG + Chr6:50802314-50802333 MsG0680032840.01.T01:intron 35.0%
CATTTCACTACTATACATGC+CGG + Chr6:50803775-50803794 MsG0680032840.01.T01:intron 35.0%
CCATATTTGACAGATGAACA+TGG + Chr6:50801341-50801360 MsG0680032840.01.T01:CDS 35.0%
CCATGTTCATCTGTCAAATA+TGG - Chr6:50801344-50801363 None:intergenic 35.0%
CCCCTAAATCATCAAAATAG+AGG - Chr6:50796888-50796907 None:intergenic 35.0%
CTATGTAGTGTTATAACGCT+TGG - Chr6:50799651-50799670 None:intergenic 35.0%
CTTCAGATGATCCAATTGAT+TGG + Chr6:50802591-50802610 MsG0680032840.01.T01:CDS 35.0%
GAAGGAGAAAGGAGAAAAAA+GGG + Chr6:50797651-50797670 MsG0680032840.01.T01:intron 35.0%
GAGATTCGGATTCAAGAAAA+GGG + Chr6:50804088-50804107 MsG0680032840.01.T01:intron 35.0%
GAGCAAACAAATCATGGATA+AGG - Chr6:50801882-50801901 None:intergenic 35.0%
GAGTGTTAGTTACTACTTAC+AGG + Chr6:50796472-50796491 MsG0680032840.01.T01:intron 35.0%
GATAAAAAAAAAGGGCAACC+CGG - Chr6:50798494-50798513 None:intergenic 35.0%
GCAGATATATGCTTCTGTAT+TGG - Chr6:50802686-50802705 None:intergenic 35.0%
GTATTAGGATGTGTAGTACA+AGG - Chr6:50804179-50804198 None:intergenic 35.0%
TAATCAACGATCCTATTTGC+TGG + Chr6:50803250-50803269 MsG0680032840.01.T01:intron 35.0%
TACATTTGCCATGTTACAGT+TGG + Chr6:50803962-50803981 MsG0680032840.01.T01:intron 35.0%
TATCCAACAGAGAGACTTAA+GGG - Chr6:50803537-50803556 None:intergenic 35.0%
TATCTGCATTATGGAAAGTC+TGG + Chr6:50800948-50800967 MsG0680032840.01.T01:intron 35.0%
TATGAAGGTTGTGTTTGTCA+AGG - Chr6:50804408-50804427 None:intergenic 35.0%
TATTATCAACACTGAACCCT+GGG - Chr6:50803310-50803329 None:intergenic 35.0%
TATTGTTGAAGTCCAAAAGG+TGG - Chr6:50801799-50801818 None:intergenic 35.0%
TATTTCCTCAAATGGGTGAT+AGG - Chr6:50800330-50800349 None:intergenic 35.0%
TCACTTCTGTACACAATCAT+TGG - Chr6:50804668-50804687 None:intergenic 35.0%
TCCTAGTTTCCACAGTTAAA+TGG + Chr6:50803649-50803668 MsG0680032840.01.T01:intron 35.0%
TCTAACCTTGTAGATAATGC+TGG + Chr6:50801542-50801561 MsG0680032840.01.T01:intron 35.0%
TCTGTCAAATATGGCAAATC+TGG - Chr6:50801335-50801354 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + Chr6:50798402-50798421 MsG0680032840.01.T01:intron 35.0%
TGAAACGGAAACCCTAATTA+TGG - Chr6:50800621-50800640 None:intergenic 35.0%
TGAAATATCCAACATGGCAT+GGG + Chr6:50797805-50797824 MsG0680032840.01.T01:intron 35.0%
TGAGAATGAGGATTATGACT+CGG + Chr6:50802201-50802220 MsG0680032840.01.T01:CDS 35.0%
TGAGATTCGGATTCAAGAAA+AGG + Chr6:50804087-50804106 MsG0680032840.01.T01:intron 35.0%
TGATTACAATTCATTGCAGG+AGG + Chr6:50803995-50804014 MsG0680032840.01.T01:intron 35.0%
TGCACTAGAAAGGAAAATTC+TGG - Chr6:50800866-50800885 None:intergenic 35.0%
TGGTTATGGTTGTGAATTTG+TGG + Chr6:50796928-50796947 MsG0680032840.01.T01:intron 35.0%
TGTAGACGATCCCATATTAT+GGG + Chr6:50798022-50798041 MsG0680032840.01.T01:intron 35.0%
TTGAAATATCCAACATGGCA+TGG + Chr6:50797804-50797823 MsG0680032840.01.T01:intron 35.0%
TTTACTAATTTCGGCAGTAC+TGG - Chr6:50802717-50802736 None:intergenic 35.0%
! AAAGCTCAACAGTCTAAAGT+AGG - Chr6:50799516-50799535 None:intergenic 35.0%
! AAGCTCAACAGTCTAAAGTA+GGG - Chr6:50799515-50799534 None:intergenic 35.0%
! ATAGGCTCTGATATCATCTT+AGG + Chr6:50799857-50799876 MsG0680032840.01.T01:intron 35.0%
! ATGTCACTTCAGGAAAATCT+TGG - Chr6:50800012-50800031 None:intergenic 35.0%
! ATTCAAGTGTTTTCTGCACA+CGG + Chr6:50802893-50802912 MsG0680032840.01.T01:CDS 35.0%
! CATTTTCATTGCATCAGTTG+AGG - Chr6:50801132-50801151 None:intergenic 35.0%
! CCTTGCACTCAATTTTTATC+GGG - Chr6:50799450-50799469 None:intergenic 35.0%
! CGATTTTGTAAGGATGAGTT+AGG - Chr6:50799896-50799915 None:intergenic 35.0%
! GAAAATGTAGGTGACCTTTT+AGG - Chr6:50797555-50797574 None:intergenic 35.0%
! GAAATATCTGAAGTTGTTGC+AGG - Chr6:50803208-50803227 None:intergenic 35.0%
! GAGGTATTTCACATGACATT+TGG - Chr6:50799229-50799248 None:intergenic 35.0%
! GTCCATCAGAAATTGACTTT+GGG + Chr6:50802101-50802120 MsG0680032840.01.T01:CDS 35.0%
! GTTAGTTAAGTTGTGGTTTG+TGG + Chr6:50798778-50798797 MsG0680032840.01.T01:intron 35.0%
! TAGTTTTTCACAAACCCAAG+AGG - Chr6:50799012-50799031 None:intergenic 35.0%
! TCTTCACAAGTTTGTTTCTC+CGG - Chr6:50800238-50800257 None:intergenic 35.0%
! TCTTTTATCAATGTGGGACT+TGG + Chr6:50799965-50799984 MsG0680032840.01.T01:intron 35.0%
! TGTATAGCTGATGATGATTG+TGG + Chr6:50801226-50801245 MsG0680032840.01.T01:intron 35.0%
! TGTGGAAGTTAGTTAAGTTG+TGG + Chr6:50798771-50798790 MsG0680032840.01.T01:intron 35.0%
! TTCTAGAAGTAGATGGATGA+AGG - Chr6:50799286-50799305 None:intergenic 35.0%
! TTGTATGGCTTGTATGACTT+TGG + Chr6:50804642-50804661 MsG0680032840.01.T01:CDS 35.0%
! TTTATGTTCTGATTTTGCGC+AGG + Chr6:50803397-50803416 MsG0680032840.01.T01:intron 35.0%
!! AACTGTAATTTGCCACCTTT+TGG + Chr6:50801784-50801803 MsG0680032840.01.T01:intron 35.0%
!! ACCATATTAGAGAGAGTGTT+AGG + Chr6:50797086-50797105 MsG0680032840.01.T01:intron 35.0%
!! ACTGTTGATTTGAGTGTGTA+TGG - Chr6:50799053-50799072 None:intergenic 35.0%
!! CCATATTAGAGAGAGTGTTA+GGG + Chr6:50797087-50797106 MsG0680032840.01.T01:intron 35.0%
!! GAAAGTGTTGGTGTGATTAA+TGG + Chr6:50802755-50802774 MsG0680032840.01.T01:CDS 35.0%
!! GCTGATTTTGTGATAGCATT+TGG - Chr6:50797760-50797779 None:intergenic 35.0%
!! GGCCTTATCTTTTATCAATG+TGG + Chr6:50799958-50799977 MsG0680032840.01.T01:intron 35.0%
!! GGCTTCTCATTTTTCTTTAC+AGG - Chr6:50800305-50800324 None:intergenic 35.0%
!! GTAACCTAATTTGTGGCTTT+TGG + Chr6:50802472-50802491 MsG0680032840.01.T01:intron 35.0%
!!! GCTTCGTTTTTTGTTGCTTT+GGG - Chr6:50804575-50804594 None:intergenic 35.0%
!!! TCAGTGCTATTTTTGTACGA+CGG + Chr6:50800480-50800499 MsG0680032840.01.T01:intron 35.0%
!!! TGCTTCGTTTTTTGTTGCTT+TGG - Chr6:50804576-50804595 None:intergenic 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - Chr6:50798403-50798422 None:intergenic 35.0%
AAAAGGAAGTCTCGTCTGAA+GGG - Chr6:50802853-50802872 None:intergenic 40.0%
AACCTCATTGGAATGTGCAT+GGG - Chr6:50804706-50804725 None:intergenic 40.0%
AAGGTAATGAACTTCCCCAA+TGG - Chr6:50803893-50803912 None:intergenic 40.0%
AATAGTATAGTGCAGCCTCT+TGG + Chr6:50798994-50799013 MsG0680032840.01.T01:intron 40.0%
AATGGAACAGATGACAAGGA+AGG - Chr6:50803912-50803931 None:intergenic 40.0%
AATTAGGAGACAGGACAACA+AGG - Chr6:50804850-50804869 None:intergenic 40.0%
ACACTGCTTGGTTTACATGA+TGG + Chr6:50800515-50800534 MsG0680032840.01.T01:intron 40.0%
ACAGCCAATAACATCAACCA+AGG - Chr6:50798537-50798556 None:intergenic 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG + Chr6:50798396-50798415 MsG0680032840.01.T01:intron 40.0%
ACCTGATCTAAACCATCTCA+TGG + Chr6:50799485-50799504 MsG0680032840.01.T01:intron 40.0%
ACTCTCCAGCATTATCTACA+AGG - Chr6:50801550-50801569 None:intergenic 40.0%
AGAATCACAGTTAAACTCGG+TGG - Chr6:50798718-50798737 None:intergenic 40.0%
AGATGGTAGAAAACAGGCTT+AGG + Chr6:50797128-50797147 MsG0680032840.01.T01:intron 40.0%
AGTAACAAAACCACACTGCT+TGG + Chr6:50800503-50800522 MsG0680032840.01.T01:intron 40.0%
ATAGTATAGTGCAGCCTCTT+GGG + Chr6:50798995-50799014 MsG0680032840.01.T01:intron 40.0%
ATCATGTAAACCAAGCAGTG+TGG - Chr6:50800516-50800535 None:intergenic 40.0%
ATCCTCACTAATCTCCAATG+TGG - Chr6:50800360-50800379 None:intergenic 40.0%
ATCTAAACCCAAAAGTCTGC+GGG - Chr6:50797628-50797647 None:intergenic 40.0%
CAGATAATAACCGTTCAACG+TGG + Chr6:50796550-50796569 MsG0680032840.01.T01:intron 40.0%
CAGCCTCTTGTGTAAAAACA+GGG + Chr6:50798397-50798416 MsG0680032840.01.T01:intron 40.0%
CATAATTGGTGTGGATACCA+TGG + Chr6:50802051-50802070 MsG0680032840.01.T01:CDS 40.0%
CATCTCAGAGATCATTTCCA+TGG - Chr6:50802071-50802090 None:intergenic 40.0%
CCAAGTCTTTGCCCATAATA+TGG - Chr6:50798036-50798055 None:intergenic 40.0%
CCATATTATGGGCAAAGACT+TGG + Chr6:50798033-50798052 MsG0680032840.01.T01:intron 40.0%
CCCGATAAAAATTGAGTGCA+AGG + Chr6:50799447-50799466 MsG0680032840.01.T01:intron 40.0%
CCCTAACACTCTCTCTAATA+TGG - Chr6:50797090-50797109 None:intergenic 40.0%
CCTATCGTAGATCTGTTGTT+GGG - Chr6:50799842-50799861 None:intergenic 40.0%
CCTTACAAAACCAGCTTGTA+AGG + Chr6:50799615-50799634 MsG0680032840.01.T01:intron 40.0%
CGAAGGAGAAAGGAGAAAAA+AGG + Chr6:50797650-50797669 MsG0680032840.01.T01:intron 40.0%
CGAGTTTAACTGTGATTCTG+CGG + Chr6:50798719-50798738 MsG0680032840.01.T01:intron 40.0%
CGCAGAATCACAGTTAAACT+CGG - Chr6:50798721-50798740 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG + Chr6:50798428-50798447 MsG0680032840.01.T01:intron 40.0%
CTAAAAAAAGGGCGGGATTA+GGG + Chr6:50797873-50797892 MsG0680032840.01.T01:intron 40.0%
GACTGCAAAATATCTTCACC+GGG - Chr6:50801484-50801503 None:intergenic 40.0%
GAGTGTGTATGGAAAATGGT+AGG - Chr6:50799042-50799061 None:intergenic 40.0%
GCAATGTAACTGTGGTTAGA+GGG + Chr6:50798681-50798700 MsG0680032840.01.T01:intron 40.0%
GCGGAATACAAGAAGTTTAG+TGG + Chr6:50796814-50796833 MsG0680032840.01.T01:intron 40.0%
GCTATCACAAAATCAGCAAG+TGG + Chr6:50797763-50797782 MsG0680032840.01.T01:intron 40.0%
GGACTGCAAAATATCTTCAC+CGG - Chr6:50801485-50801504 None:intergenic 40.0%
GGTTAACAGCAAAGCAACAA+TGG + Chr6:50801262-50801281 MsG0680032840.01.T01:intron 40.0%
GTAGCAAGTCATAATTGGTG+TGG + Chr6:50802042-50802061 MsG0680032840.01.T01:intron 40.0%
GTCTCCAAAAGCCACAAATT+AGG - Chr6:50802479-50802498 None:intergenic 40.0%
GTTGCGTACAATACACCAAA+TGG + Chr6:50798424-50798443 MsG0680032840.01.T01:intron 40.0%
GTTGTTGTCATGTGACTGAA+AGG + Chr6:50798352-50798371 MsG0680032840.01.T01:intron 40.0%
GTTTAGATTGCGAAGGAGAA+AGG + Chr6:50797640-50797659 MsG0680032840.01.T01:intron 40.0%
TAAAAGGAAGTCTCGTCTGA+AGG - Chr6:50802854-50802873 None:intergenic 40.0%
TAACCTCCGAGTAAAGATTC+TGG + Chr6:50798636-50798655 MsG0680032840.01.T01:intron 40.0%
TACTTGTACGTATGCATCCT+TGG + Chr6:50798517-50798536 MsG0680032840.01.T01:intron 40.0%
TCAGAACCCTAAAAAAAGGG+CGG + Chr6:50797865-50797884 MsG0680032840.01.T01:intron 40.0%
TCATTGCATCAGTTGAGGTT+GGG - Chr6:50801127-50801146 None:intergenic 40.0%
TCCATGAGATGGTTTAGATC+AGG - Chr6:50799489-50799508 None:intergenic 40.0%
TCCCACATTTCCTAGAGATA+CGG - Chr6:50799675-50799694 None:intergenic 40.0%
TCGTGTAGTCTTCTACTTCA+AGG - Chr6:50803427-50803446 None:intergenic 40.0%
TCTCTCTGTTGGATATGCAA+GGG + Chr6:50803542-50803561 MsG0680032840.01.T01:CDS 40.0%
TGCAATGTAACTGTGGTTAG+AGG + Chr6:50798680-50798699 MsG0680032840.01.T01:intron 40.0%
TGTATGACGAGTTGCAACTT+CGG - Chr6:50797407-50797426 None:intergenic 40.0%
TTCATTGCATCAGTTGAGGT+TGG - Chr6:50801128-50801147 None:intergenic 40.0%
TTTACTCGGAGGTTATCATG+AGG - Chr6:50798631-50798650 None:intergenic 40.0%
TTTCCAGAATCTTTACTCGG+AGG - Chr6:50798642-50798661 None:intergenic 40.0%
! AAGTCTTATCCCACTAAGTG+GGG - Chr6:50804807-50804826 None:intergenic 40.0%
! AGGCAGCTATTTCCTCAAAT+GGG - Chr6:50800337-50800356 None:intergenic 40.0%
! CAAGTCTTATCCCACTAAGT+GGG - Chr6:50804808-50804827 None:intergenic 40.0%
! CATGGAAATGATCTCTGAGA+TGG + Chr6:50802069-50802088 MsG0680032840.01.T01:CDS 40.0%
! CGAGACTTCCTTTTACAGAT+TGG + Chr6:50802859-50802878 MsG0680032840.01.T01:CDS 40.0%
! CTTCACAAGTTTGTTTCTCC+GGG - Chr6:50800237-50800256 None:intergenic 40.0%
! GATGCGATTTTCTCATCCAA+TGG + Chr6:50802414-50802433 MsG0680032840.01.T01:CDS 40.0%
! GATGTTATTGGCTGTAATCG+TGG + Chr6:50798542-50798561 MsG0680032840.01.T01:intron 40.0%
! GCATCCTTGGTTGATGTTAT+TGG + Chr6:50798530-50798549 MsG0680032840.01.T01:intron 40.0%
! GGTCCATCAGAAATTGACTT+TGG + Chr6:50802100-50802119 MsG0680032840.01.T01:CDS 40.0%
! GGTGACCTTTTAGGCTTATA+TGG - Chr6:50797546-50797565 None:intergenic 40.0%
! GTCTTCGATGCACTTTTGAT+GGG + Chr6:50803603-50803622 MsG0680032840.01.T01:CDS 40.0%
! TCCGAGTAAAGATTCTGGAA+AGG + Chr6:50798641-50798660 MsG0680032840.01.T01:intron 40.0%
! TCTACCATCTTTTCTGCCAT+AGG - Chr6:50797118-50797137 None:intergenic 40.0%
! TGTCTTCGATGCACTTTTGA+TGG + Chr6:50803602-50803621 MsG0680032840.01.T01:CDS 40.0%
! TTCACAAGTTTGTTTCTCCG+GGG - Chr6:50800236-50800255 None:intergenic 40.0%
! TTCGCCCGTGAAATTTTGTA+TGG + Chr6:50804627-50804646 MsG0680032840.01.T01:CDS 40.0%
! TTGAAAACCCGCAGACTTTT+GGG + Chr6:50797618-50797637 MsG0680032840.01.T01:intron 40.0%
! TTTGACGTAAGGGTTTGTTC+AGG + Chr6:50804047-50804066 MsG0680032840.01.T01:intron 40.0%
!! AGAAATTGACTTTGGGATCG+AGG + Chr6:50802108-50802127 MsG0680032840.01.T01:CDS 40.0%
!! CCTTACAAAATCGGCTTGTA+AGG + Chr6:50799903-50799922 MsG0680032840.01.T01:intron 40.0%
!! CCTTACAAGCCGATTTTGTA+AGG - Chr6:50799906-50799925 None:intergenic 40.0%
!! GATATGCAAGGGTATTCAAG+TGG + Chr6:50803553-50803572 MsG0680032840.01.T01:CDS 40.0%
!! TGTTAATACCTTTTGGAGGC+AGG - Chr6:50800696-50800715 None:intergenic 40.0%
!! TGTTGCTTTGGGTGATTTCT+TGG - Chr6:50804564-50804583 None:intergenic 40.0%
!!! AAGCTGGTTTTGTAAGGTTG+AGG - Chr6:50799612-50799631 None:intergenic 40.0%
!!! AGCTGGTTTTGTAAGGTTGA+GGG - Chr6:50799611-50799630 None:intergenic 40.0%
!!! CCTTACAAGCTGGTTTTGTA+AGG - Chr6:50799618-50799637 None:intergenic 40.0%
!!! CTAATCCCGCCCTTTTTTTA+GGG - Chr6:50797874-50797893 None:intergenic 40.0%
!!! CTTTTGGGTTTAGATTGCGA+AGG + Chr6:50797633-50797652 MsG0680032840.01.T01:intron 40.0%
AAGCCCTTAAGTCTCTCTGT+TGG + Chr6:50803531-50803550 MsG0680032840.01.T01:CDS 45.0%
AAGTAGGGATGTCCATGAGA+TGG - Chr6:50799500-50799519 None:intergenic 45.0%
ACAACATCCTAGCTCAGATC+AGG + Chr6:50800277-50800296 MsG0680032840.01.T01:CDS 45.0%
ACTACATAGGCCGTATCTCT+AGG + Chr6:50799662-50799681 MsG0680032840.01.T01:intron 45.0%
ACTTGCAGACTGGGCAAAAT+TGG + Chr6:50802387-50802406 MsG0680032840.01.T01:CDS 45.0%
AGCACCTATGGCAGAAAAGA+TGG + Chr6:50797111-50797130 MsG0680032840.01.T01:intron 45.0%
ATATGAGGTATGACCTACCC+AGG + Chr6:50803290-50803309 MsG0680032840.01.T01:intron 45.0%
ATCATACTTGCAGGCTACGT+CGG + Chr6:50804500-50804519 MsG0680032840.01.T01:intron 45.0%
ATTTAGACCCGTGCAATGCA+TGG + Chr6:50804996-50805015 MsG0680032840.01.T01:three_prime_UTR 45.0%
CAAAACAGGCTGCACTAGAA+AGG - Chr6:50800876-50800895 None:intergenic 45.0%
CAACCTCATTGGAATGTGCA+TGG - Chr6:50804707-50804726 None:intergenic 45.0%
CACAAAATCAGCAAGTGGCT+TGG + Chr6:50797768-50797787 MsG0680032840.01.T01:intron 45.0%
CAGAACCCTAAAAAAAGGGC+GGG + Chr6:50797866-50797885 MsG0680032840.01.T01:intron 45.0%
CATGGGTGTAGGAGATGTAA+AGG + Chr6:50805014-50805033 MsG0680032840.01.T01:three_prime_UTR 45.0%
CCACTTAGTGGGATAAGACT+TGG + Chr6:50804806-50804825 MsG0680032840.01.T01:intron 45.0%
CCCAACAACAGATCTACGAT+AGG + Chr6:50799839-50799858 MsG0680032840.01.T01:intron 45.0%
CCTAAAAAAAGGGCGGGATT+AGG + Chr6:50797872-50797891 MsG0680032840.01.T01:intron 45.0%
CGCGCAAAACCATTTAACTG+TGG - Chr6:50803661-50803680 None:intergenic 45.0%
CTCAACCTGATGCTATTGCA+AGG + Chr6:50803450-50803469 MsG0680032840.01.T01:CDS 45.0%
CTCACTAATCTCCAATGTGG+AGG - Chr6:50800357-50800376 None:intergenic 45.0%
CTCCACATTGGAGATTAGTG+AGG + Chr6:50800355-50800374 MsG0680032840.01.T01:CDS 45.0%
GAAAACAGGCTTAGGTGGTT+TGG + Chr6:50797136-50797155 MsG0680032840.01.T01:intron 45.0%
GAAGTACGGTACTACGAACT+TGG + Chr6:50797007-50797026 MsG0680032840.01.T01:intron 45.0%
GATGACCTTGCAATAGCATC+AGG - Chr6:50803458-50803477 None:intergenic 45.0%
GCAGGTTTATAGGCAGTTTC+AGG + Chr6:50799411-50799430 MsG0680032840.01.T01:intron 45.0%
GCCTATCGTAGATCTGTTGT+TGG - Chr6:50799843-50799862 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG + Chr6:50798427-50798446 MsG0680032840.01.T01:intron 45.0%
GGACAACAAGGAAGTAACAG+AGG - Chr6:50804776-50804795 None:intergenic 45.0%
GGGTAAAACTTCCCAAGAAC+AGG - Chr6:50801413-50801432 None:intergenic 45.0%
GTAGTAAGGAGAGGATACTC+AGG + Chr6:50797187-50797206 MsG0680032840.01.T01:intron 45.0%
GTCTCTCTGTTGGATATGCA+AGG + Chr6:50803541-50803560 MsG0680032840.01.T01:CDS 45.0%
GTTTGTGGCTGAATGAGGAA+TGG + Chr6:50798793-50798812 MsG0680032840.01.T01:intron 45.0%
TAACCGTTCAACGTGGAATG+CGG + Chr6:50796557-50796576 MsG0680032840.01.T01:CDS 45.0%
TAGGATTACCTGCCTCCAAA+AGG + Chr6:50800685-50800704 MsG0680032840.01.T01:intron 45.0%
TATGAGGTATGACCTACCCA+GGG + Chr6:50803291-50803310 MsG0680032840.01.T01:intron 45.0%
TCATGTGACTGAAAGGTCAC+AGG + Chr6:50798359-50798378 MsG0680032840.01.T01:intron 45.0%
TCCTCAAATGGGTGATAGGA+TGG - Chr6:50800326-50800345 None:intergenic 45.0%
TCTTACACCTTCACCGTGTT+AGG - Chr6:50799717-50799736 None:intergenic 45.0%
TGATCAACCTTAGGAGTTCC+TGG - Chr6:50802975-50802994 None:intergenic 45.0%
TGGTAGAAAACAGGCTTAGG+TGG + Chr6:50797131-50797150 MsG0680032840.01.T01:intron 45.0%
TGTGTACAGAAGTGAAGGCA+GGG + Chr6:50804673-50804692 MsG0680032840.01.T01:exon 45.0%
TGTGTTTAGAGACAAGTGCC+AGG + Chr6:50802954-50802973 MsG0680032840.01.T01:intron 45.0%
TTATCGTTTGCAGGAATGGC+TGG + Chr6:50802318-50802337 MsG0680032840.01.T01:intron 45.0%
TTCACCGTGTTAGGTGTGAA+GGG - Chr6:50799708-50799727 None:intergenic 45.0%
TTGGAAATTCCGCCTACTTG+CGG - Chr6:50799766-50799785 None:intergenic 45.0%
TTGTGTACAGAAGTGAAGGC+AGG + Chr6:50804672-50804691 MsG0680032840.01.T01:exon 45.0%
TTTAGACCCGTGCAATGCAT+GGG + Chr6:50804997-50805016 MsG0680032840.01.T01:three_prime_UTR 45.0%
! AAAATCAGCAAGTGGCTTGG+TGG + Chr6:50797771-50797790 MsG0680032840.01.T01:intron 45.0%
! ACAACAAGCCCAAAAGTGTG+AGG - Chr6:50801831-50801850 None:intergenic 45.0%
! ACGCAGGTCTTATAACTCCT+TGG - Chr6:50802646-50802665 None:intergenic 45.0%
! AGTTTGTTTCTCCGGGGAAA+TGG - Chr6:50800230-50800249 None:intergenic 45.0%
! ATGATGAAGCACTTGCAGAC+TGG + Chr6:50802377-50802396 MsG0680032840.01.T01:CDS 45.0%
! CATTGGCTGCAATGTAACTG+TGG + Chr6:50798673-50798692 MsG0680032840.01.T01:intron 45.0%
! CCAAGTCTTATCCCACTAAG+TGG - Chr6:50804809-50804828 None:intergenic 45.0%
! GAGGCAGCTATTTCCTCAAA+TGG - Chr6:50800338-50800357 None:intergenic 45.0%
! GCCGTATCTCTAGGAAATGT+GGG + Chr6:50799671-50799690 MsG0680032840.01.T01:intron 45.0%
! GTGGGATAAGACTTGGTTGT+TGG + Chr6:50804813-50804832 MsG0680032840.01.T01:intron 45.0%
! GTTGAAAACCCGCAGACTTT+TGG + Chr6:50797617-50797636 MsG0680032840.01.T01:intron 45.0%
! TAACACGGTGAAGGTGTAAG+AGG + Chr6:50799716-50799735 MsG0680032840.01.T01:intron 45.0%
! TGATGAAGCACTTGCAGACT+GGG + Chr6:50802378-50802397 MsG0680032840.01.T01:CDS 45.0%
! TGTAGACTTGCTTGTAGCTG+CGG + Chr6:50796618-50796637 MsG0680032840.01.T01:CDS 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - Chr6:50798392-50798411 None:intergenic 45.0%
! TTCGGCAGTACTGGATTGAT+TGG - Chr6:50802708-50802727 None:intergenic 45.0%
! TTGTGGTTTGTGGCTGAATG+AGG + Chr6:50798788-50798807 MsG0680032840.01.T01:intron 45.0%
!! AAATCGGCTTGTAAGGTGAG+CGG + Chr6:50799910-50799929 MsG0680032840.01.T01:intron 45.0%
!! AGCCTGAAGTGTTGACAATG+CGG + Chr6:50799811-50799830 MsG0680032840.01.T01:intron 45.0%
!! ATCTCTGAGATGGACTTGTC+AGG + Chr6:50802079-50802098 MsG0680032840.01.T01:CDS 45.0%
!! ATGCAAGGGTATTCAAGTGG+AGG + Chr6:50803556-50803575 MsG0680032840.01.T01:CDS 45.0%
!! CAGTTAAATGGTTTTGCGCG+CGG + Chr6:50803661-50803680 MsG0680032840.01.T01:intron 45.0%
!! GATGTGAATGGTGGTGGATT+AGG + Chr6:50796582-50796601 MsG0680032840.01.T01:CDS 45.0%
!!! CCTAATCCCGCCCTTTTTTT+AGG - Chr6:50797875-50797894 None:intergenic 45.0%
!!! TACTTGCGGCATTTTGGGTT+GGG - Chr6:50799752-50799771 None:intergenic 45.0%
!!! GTTATTTTTTTTATAATTTT+GGG + Chr6:50798741-50798760 MsG0680032840.01.T01:intron 5.0%
!!! TTATTTTTTTTATAATTTTG+GGG + Chr6:50798742-50798761 MsG0680032840.01.T01:intron 5.0%
AAACAAACCCGTGCATCGCA+CGG - Chr6:50797280-50797299 None:intergenic 50.0%
AAGGTCACAGGTTCAAGTCC+TGG + Chr6:50798371-50798390 MsG0680032840.01.T01:intron 50.0%
AATGCGGAGGATGTGAATGG+TGG + Chr6:50796573-50796592 MsG0680032840.01.T01:CDS 50.0%
ACAAGTGCCAGGAACTCCTA+AGG + Chr6:50802965-50802984 MsG0680032840.01.T01:intron 50.0%
AGAACAGGGTCACCGAATCT+AGG - Chr6:50801688-50801707 None:intergenic 50.0%
AGGGTCACCGAATCTAGGTA+TGG - Chr6:50801683-50801702 None:intergenic 50.0%
ATCAACACTGAACCCTGGGT+AGG - Chr6:50803306-50803325 None:intergenic 50.0%
ATGGCATGGGTTCGAATCTC+TGG + Chr6:50797818-50797837 MsG0680032840.01.T01:intron 50.0%
CAACCCAAAATGCCGCAAGT+AGG + Chr6:50799751-50799770 MsG0680032840.01.T01:intron 50.0%
CAACTTTACCAGTTGCGCCA+AGG - Chr6:50798336-50798355 None:intergenic 50.0%
CATGGGTTCGAATCTCTGGA+GGG + Chr6:50797822-50797841 MsG0680032840.01.T01:intron 50.0%
CCAGCTTGTGTAGTCTTCCA+AGG + Chr6:50802626-50802645 MsG0680032840.01.T01:CDS 50.0%
CCTTGGAAGACTACACAAGC+TGG - Chr6:50802629-50802648 None:intergenic 50.0%
CGGTACTACGAACTTGGTTC+CGG + Chr6:50797013-50797032 MsG0680032840.01.T01:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG - Chr6:50804803-50804822 None:intergenic 50.0%
CTTATCTGTGTGGACTCGCT+CGG + Chr6:50804023-50804042 MsG0680032840.01.T01:intron 50.0%
CTTCACACCTAACACGGTGA+AGG + Chr6:50799707-50799726 MsG0680032840.01.T01:intron 50.0%
CTTCACCGTGTTAGGTGTGA+AGG - Chr6:50799709-50799728 None:intergenic 50.0%
GAGGATACTCAGGTCACTAG+AGG + Chr6:50797197-50797216 MsG0680032840.01.T01:intron 50.0%
GAGTGTTAGGGTAGCACCTA+TGG + Chr6:50797099-50797118 MsG0680032840.01.T01:intron 50.0%
GATTCGAACCCATGCCATGT+TGG - Chr6:50797816-50797835 None:intergenic 50.0%
GCCATCCTATCACCCATTTG+AGG + Chr6:50800322-50800341 MsG0680032840.01.T01:CDS 50.0%
GGAAATAGCTGCCTCCACAT+TGG + Chr6:50800343-50800362 MsG0680032840.01.T01:CDS 50.0%
GGCGGGATTAGGGTTAATCA+GGG + Chr6:50797883-50797902 MsG0680032840.01.T01:intron 50.0%
GGCTGCTCCATCCAATCAAT+TGG - Chr6:50802605-50802624 None:intergenic 50.0%
GTACTTGTGAGGGGTAACCT+TGG + Chr6:50798316-50798335 MsG0680032840.01.T01:intron 50.0%
GTCCCATGCACATTCCAATG+AGG + Chr6:50804701-50804720 MsG0680032840.01.T01:three_prime_UTR 50.0%
TCACCGTGTTAGGTGTGAAG+GGG - Chr6:50799707-50799726 None:intergenic 50.0%
TCCTACACCCATGCATTGCA+CGG - Chr6:50805007-50805026 None:intergenic 50.0%
TGACCCCTTCACACCTAACA+CGG + Chr6:50799701-50799720 MsG0680032840.01.T01:intron 50.0%
TGACGATGAGCTTGACGATG+AGG + Chr6:50802354-50802373 MsG0680032840.01.T01:CDS 50.0%
TGGAAGACTACACAAGCTGG+AGG - Chr6:50802626-50802645 None:intergenic 50.0%
TGGAATGCGGAGGATGTGAA+TGG + Chr6:50796570-50796589 MsG0680032840.01.T01:CDS 50.0%
TTATCTGTGTGGACTCGCTC+GGG + Chr6:50804024-50804043 MsG0680032840.01.T01:intron 50.0%
! GGAGGCACAACTTATCTGTG+TGG + Chr6:50804013-50804032 MsG0680032840.01.T01:intron 50.0%
! GGCCGTATCTCTAGGAAATG+TGG + Chr6:50799670-50799689 MsG0680032840.01.T01:intron 50.0%
!! CCTGAAGTGTTGACAATGCG+GGG + Chr6:50799813-50799832 MsG0680032840.01.T01:intron 50.0%
!! CGCGCGGCTTTAGTGTATTT+TGG + Chr6:50803677-50803696 MsG0680032840.01.T01:intron 50.0%
!! CTACTTGCGGCATTTTGGGT+TGG - Chr6:50799753-50799772 None:intergenic 50.0%
!! GCCTGAAGTGTTGACAATGC+GGG + Chr6:50799812-50799831 MsG0680032840.01.T01:intron 50.0%
AACAAACCCGTGCATCGCAC+GGG - Chr6:50797279-50797298 None:intergenic 55.0%
ACAGGCTCCTGATCTGAGCT+AGG - Chr6:50800287-50800306 None:intergenic 55.0%
ACTACAGCTCCCGCATATGC+AGG - Chr6:50798468-50798487 None:intergenic 55.0%
ACTCAGGTCACTAGAGGCAG+AGG + Chr6:50797203-50797222 MsG0680032840.01.T01:intron 55.0%
ACTCGCTCGGGTTTGACGTA+AGG + Chr6:50804036-50804055 MsG0680032840.01.T01:intron 55.0%
CCCAAAATGCCGCAAGTAGG+CGG + Chr6:50799754-50799773 MsG0680032840.01.T01:intron 55.0%
CCCCGCATTGTCAACACTTC+AGG - Chr6:50799816-50799835 None:intergenic 55.0%
CCTACACCCATGCATTGCAC+GGG - Chr6:50805006-50805025 None:intergenic 55.0%
CCTCCGCATTCCACGTTGAA+CGG - Chr6:50796563-50796582 None:intergenic 55.0%
CTACAGCTCCCGCATATGCA+GGG - Chr6:50798467-50798486 None:intergenic 55.0%
CTCGCTCGGGTTTGACGTAA+GGG + Chr6:50804037-50804056 MsG0680032840.01.T01:intron 55.0%
GCAGCACTCACCTTACAAGC+TGG - Chr6:50799628-50799647 None:intergenic 55.0%
GCATGGGTTCGAATCTCTGG+AGG + Chr6:50797821-50797840 MsG0680032840.01.T01:intron 55.0%
GGGCGGGATTAGGGTTAATC+AGG + Chr6:50797882-50797901 MsG0680032840.01.T01:intron 55.0%
! AGACTTGCTTGTAGCTGCGG+TGG + Chr6:50796621-50796640 MsG0680032840.01.T01:CDS 55.0%
! CCGCCTACTTGCGGCATTTT+GGG - Chr6:50799757-50799776 None:intergenic 55.0%
! TCCGCCTACTTGCGGCATTT+TGG - Chr6:50799758-50799777 None:intergenic 55.0%
ACCCGAGCACTCCATTTCCC+CGG + Chr6:50800216-50800235 MsG0680032840.01.T01:CDS 60.0%
ACCCTAACCCGTGCGATGCA+CGG + Chr6:50797269-50797288 MsG0680032840.01.T01:intron 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + Chr6:50798325-50798344 MsG0680032840.01.T01:intron 60.0%
ATGCGGGAGCTGTAGTGCAC+CGG + Chr6:50798472-50798491 MsG0680032840.01.T01:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG - Chr6:50798455-50798474 None:intergenic 60.0%
CCCGTGCAATGCATGGGTGT+AGG + Chr6:50805003-50805022 MsG0680032840.01.T01:three_prime_UTR 60.0%
CCGTTCAACGTGGAATGCGG+AGG + Chr6:50796560-50796579 MsG0680032840.01.T01:CDS 60.0%
CTCATTACCCGAGCGTGAGC+GGG - Chr6:50799793-50799812 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG + Chr6:50798455-50798474 MsG0680032840.01.T01:intron 60.0%
GCATATGCAGGGTCCGGGAA+GGG - Chr6:50798456-50798475 None:intergenic 60.0%
GCGGAGGATGTGAATGGTGG+TGG + Chr6:50796576-50796595 MsG0680032840.01.T01:CDS 60.0%
GCTCATTACCCGAGCGTGAG+CGG - Chr6:50799794-50799813 None:intergenic 60.0%
TTCCCGGACCCTGCATATGC+GGG + Chr6:50798456-50798475 MsG0680032840.01.T01:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + Chr6:50798440-50798459 MsG0680032840.01.T01:intron 60.0%
! CTCCGGGGAAATGGAGTGCT+CGG - Chr6:50800221-50800240 None:intergenic 60.0%
! CTGTGCCGACCCCACTTAGT+GGG + Chr6:50804795-50804814 MsG0680032840.01.T01:intron 60.0%
! TCCGGGGAAATGGAGTGCTC+GGG - Chr6:50800220-50800239 None:intergenic 60.0%
ACCCGTGCATCGCACGGGTT+AGG - Chr6:50797274-50797293 None:intergenic 65.0%
CAACACACCCGCTCACGCTC+GGG + Chr6:50799783-50799802 MsG0680032840.01.T01:intron 65.0%
CCAACACACCCGCTCACGCT+CGG + Chr6:50799782-50799801 MsG0680032840.01.T01:intron 65.0%
CCACTAAGTGGGGTCGGCAC+AGG - Chr6:50804797-50804816 None:intergenic 65.0%
CCCTAACCCGTGCGATGCAC+GGG + Chr6:50797270-50797289 MsG0680032840.01.T01:intron 65.0%
CGCATATGCAGGGTCCGGGA+AGG - Chr6:50798457-50798476 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG - Chr6:50798442-50798461 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG - Chr6:50798461-50798480 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG - Chr6:50798462-50798481 None:intergenic 65.0%
GGGGTCGGCACAGGACAACA+AGG - Chr6:50804788-50804807 None:intergenic 65.0%
TGCGGGAGCTGTAGTGCACC+GGG + Chr6:50798473-50798492 MsG0680032840.01.T01:intron 65.0%
! CCCGTGCATCGCACGGGTTA+GGG - Chr6:50797273-50797292 None:intergenic 65.0%
! CCTGTGCCGACCCCACTTAG+TGG + Chr6:50804794-50804813 MsG0680032840.01.T01:intron 65.0%
CCGAGCGTGAGCGGGTGTGT+TGG - Chr6:50799785-50799804 None:intergenic 70.0%
GCGGTGGTTTCGACGCGCCG+TGG + Chr6:50796637-50796656 MsG0680032840.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr6 gene 50796434 50805054 50796434 ID=MsG0680032840.01;Name=MsG0680032840.01
Chr6 mRNA 50796434 50805054 50796434 ID=MsG0680032840.01.T01;Parent=MsG0680032840.01;Name=MsG0680032840.01.T01;_AED=0.48;_eAED=0.50;_QI=0|0.8|0.81|1|0.9|0.81|11|305|520
Chr6 exon 50804859 50805054 50804859 ID=MsG0680032840.01.T01:exon:10343;Parent=MsG0680032840.01.T01
Chr6 exon 50804513 50804796 50804513 ID=MsG0680032840.01.T01:exon:10342;Parent=MsG0680032840.01.T01
Chr6 exon 50803419 50803624 50803419 ID=MsG0680032840.01.T01:exon:10341;Parent=MsG0680032840.01.T01
Chr6 exon 50802587 50802922 50802587 ID=MsG0680032840.01.T01:exon:10340;Parent=MsG0680032840.01.T01
Chr6 exon 50802331 50802459 50802331 ID=MsG0680032840.01.T01:exon:10339;Parent=MsG0680032840.01.T01
Chr6 exon 50802046 50802222 50802046 ID=MsG0680032840.01.T01:exon:10338;Parent=MsG0680032840.01.T01
Chr6 exon 50801461 50801528 50801461 ID=MsG0680032840.01.T01:exon:10337;Parent=MsG0680032840.01.T01
Chr6 exon 50801263 50801365 50801263 ID=MsG0680032840.01.T01:exon:10336;Parent=MsG0680032840.01.T01
Chr6 exon 50800199 50800421 50800199 ID=MsG0680032840.01.T01:exon:10335;Parent=MsG0680032840.01.T01
Chr6 exon 50796553 50796658 50796553 ID=MsG0680032840.01.T01:exon:10334;Parent=MsG0680032840.01.T01
Chr6 exon 50796434 50796473 50796434 ID=MsG0680032840.01.T01:exon:10333;Parent=MsG0680032840.01.T01
Chr6 CDS 50796434 50796473 50796434 ID=MsG0680032840.01.T01:cds;Parent=MsG0680032840.01.T01
Chr6 CDS 50796553 50796658 50796553 ID=MsG0680032840.01.T01:cds;Parent=MsG0680032840.01.T01
Chr6 CDS 50800199 50800421 50800199 ID=MsG0680032840.01.T01:cds;Parent=MsG0680032840.01.T01
Chr6 CDS 50801263 50801365 50801263 ID=MsG0680032840.01.T01:cds;Parent=MsG0680032840.01.T01
Chr6 CDS 50801461 50801528 50801461 ID=MsG0680032840.01.T01:cds;Parent=MsG0680032840.01.T01
Chr6 CDS 50802046 50802222 50802046 ID=MsG0680032840.01.T01:cds;Parent=MsG0680032840.01.T01
Chr6 CDS 50802331 50802459 50802331 ID=MsG0680032840.01.T01:cds;Parent=MsG0680032840.01.T01
Chr6 CDS 50802587 50802922 50802587 ID=MsG0680032840.01.T01:cds;Parent=MsG0680032840.01.T01
Chr6 CDS 50803419 50803624 50803419 ID=MsG0680032840.01.T01:cds;Parent=MsG0680032840.01.T01
Chr6 CDS 50804513 50804687 50804513 ID=MsG0680032840.01.T01:cds;Parent=MsG0680032840.01.T01
Chr6 three_prime_UTR 50804688 50804796 50804688 ID=MsG0680032840.01.T01:three_prime_utr;Parent=MsG0680032840.01.T01
Chr6 three_prime_UTR 50804859 50805054 50804859 ID=MsG0680032840.01.T01:three_prime_utr;Parent=MsG0680032840.01.T01
Gene Sequence

>MsG0680032840.01.T01

ATGGACACGTCTTTAATCAGAAGTGTCAGTGTTACAGAGAATAATAACCGTTCAACGTGGAATGCGGAGGATGTGAATGGTGGTGGATTAGGTTATGTTGCGTCGTGTAGACTTGCTTGTAGCTGCGGTGGTTTCGACGCGCCGTGGATAAGAAGTAAAAAGTACCCGAGCACTCCATTTCCCCGGAGAAACAAACTTGTGAAGAATAGAATTCGAGTATCATCACAACATCCTAGCTCAGATCAGGAGCCTGTAAAGAAAAATGAGAAGCCATCCTATCACCCATTTGAGGAAATAGCTGCCTCCACATTGGAGATTAGTGAGGATGTTAGACTTACTGCAGCAGAAACAAGTAGAACTGTTATCGAGGTTAACAGCAAAGCAACAATGGTGTTTTCAACTTTCGTTAATGATGAATTTCATGATAATATTGTTTGGCCAGATTTGCCATATTTGACAGATGAACATGGAAATATATATTTTCAAGCAAAGCCCGGTGAAGATATTTTGCAGTCCCTAACTTCAGAAAATAATTTTGTGCAAGTCATAATTGGTGTGGATACCATGGAAATGATCTCTGAGATGGACTTGTCAGGTCCATCAGAAATTGACTTTGGGATCGAGGAAATTGATGACGAAGATACTGATGATTTAGATGACAGCGATGTTGAAGATGACGTAGATGAAAATGAAGATGAGAATGAGGATTATGACTCGGAATGGCTGGCTGTTCTTTCAGATGACGATGAGCTTGACGATGAGGATGATGAAGCACTTGCAGACTGGGCAAAATTGGAGACGATGCGATTTTCTCATCCAATGGATTTTGCTAAAAAATTGACTGAGATTGCTTCAGATGATCCAATTGATTGGATGGAGCAGCCTCCAGCTTGTGTAGTCTTCCAAGGAGTTATAAGACCTGCGTTTATTGAAGAAAATTCTCCAATACAGAAGCATATATCTGCCAATCAATCCAGTACTGCCGAAATTAGTAAAGTAACAGAAAATAAAGAAGAAAGTGTTGGTGTGATTAATGGTCATGAGCACAATAAAGAGTCGTCTGAAGATAACGCATCACAAAAGTTGGAAAATAATGAGAATGGTGATATCCCTTCAGACGAGACTTCCTTTTACAGATTGGAGATTGTTAAGATTCAAGTGTTTTCTGCACACGGACATCCCGTTGTCCTTGAAGTAGAAGACTACACGAAAGCTCAACCTGATGCTATTGCAAGGTCATCTTCAAAAATTATATCTCATTTGAAAGCTGCTGGAGAATCAGAAAAGACTTTGCAAGCCCTTAAGTCTCTCTGTTGGATATGCAAGGGTATTCAAGTGGAGGTAATACATAAACTCTTGAATTGTTGTCTTCGATGCACTTTTGATGGGCTACGTCGGAATACAGTGCCGAGAGACAACTCAATGATATACTATTTCCAAGAAATCACCCAAAGCAACAAAAAACGAAGCAAACACATCAAAATGAATGCTAAAAAAGTCACTTCGCCCGTGAAATTTTGTATGGCTTGTATGACTTTGGCCAATGATTGTGTACAGAAGTGA

Protein sequence

>MsG0680032840.01.T01

MDTSLIRSVSVTENNNRSTWNAEDVNGGGLGYVASCRLACSCGGFDAPWIRSKKYPSTPFPRRNKLVKNRIRVSSQHPSSDQEPVKKNEKPSYHPFEEIAASTLEISEDVRLTAAETSRTVIEVNSKATMVFSTFVNDEFHDNIVWPDLPYLTDEHGNIYFQAKPGEDILQSLTSENNFVQVIIGVDTMEMISEMDLSGPSEIDFGIEEIDDEDTDDLDDSDVEDDVDENEDENEDYDSEWLAVLSDDDELDDEDDEALADWAKLETMRFSHPMDFAKKLTEIASDDPIDWMEQPPACVVFQGVIRPAFIEENSPIQKHISANQSSTAEISKVTENKEESVGVINGHEHNKESSEDNASQKLENNENGDIPSDETSFYRLEIVKIQVFSAHGHPVVLEVEDYTKAQPDAIARSSSKIISHLKAAGESEKTLQALKSLCWICKGIQVEVIHKLLNCCLRCTFDGLRRNTVPRDNSMIYYFQEITQSNKKRSKHIKMNAKKVTSPVKFCMACMTLANDCVQK*