Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020705.01.T01 | XP_003606328.2 | 87.5 | 200 | 4 | 1 | 1 | 179 | 1 | 200 | 2.18E-115 | 336 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020705.01.T01 | O65198 | 88.265 | 196 | 2 | 1 | 5 | 179 | 1 | 196 | 3.82E-116 | 330 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020705.01.T01 | B7FHQ5 | 87.500 | 200 | 4 | 1 | 1 | 179 | 1 | 200 | 1.04e-115 | 336 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047945.01 | MsG0480020705.01 | 0.837503 | 5.001144e-57 | 6.509968e-54 |
| MsG0080047955.01 | MsG0480020705.01 | 0.817872 | 2.631636e-52 | 1.939458e-49 |
| MsG0080047956.01 | MsG0480020705.01 | 0.827352 | 1.640350e-54 | 1.579849e-51 |
| MsG0080048917.01 | MsG0480020705.01 | 0.845450 | 4.031398e-59 | 6.720537e-56 |
| MsG0080048929.01 | MsG0480020705.01 | 0.850421 | 1.716709e-60 | 3.361095e-57 |
| MsG0080049004.01 | MsG0480020705.01 | 0.820177 | 7.870590e-53 | 6.183213e-50 |
| MsG0080049039.01 | MsG0480020705.01 | 0.824857 | 6.429158e-54 | 5.764226e-51 |
| MsG0080049053.01 | MsG0480020705.01 | 0.869708 | 2.529145e-66 | 9.583037e-63 |
| MsG0080049054.01 | MsG0480020705.01 | 0.852602 | 4.143840e-61 | 8.704441e-58 |
| MsG0080049062.01 | MsG0480020705.01 | 0.800442 | 1.438427e-48 | 6.698447e-46 |
| MsG0180000193.01 | MsG0480020705.01 | 0.844141 | 9.084941e-59 | 1.453167e-55 |
| MsG0180000194.01 | MsG0480020705.01 | 0.838851 | 2.249046e-57 | 3.050533e-54 |
| MsG0180000325.01 | MsG0480020705.01 | 0.811973 | 5.356093e-51 | 3.362852e-48 |
| MsG0180000352.01 | MsG0480020705.01 | 0.811560 | 6.586232e-51 | 4.090063e-48 |
| MsG0180003296.01 | MsG0480020705.01 | 0.856932 | 2.302373e-62 | 5.585631e-59 |
| MsG0180003759.01 | MsG0480020705.01 | 0.812772 | 3.583797e-51 | 2.298624e-48 |
| MsG0180003904.01 | MsG0480020705.01 | 0.817938 | 2.543479e-52 | 1.877826e-49 |
| MsG0180003980.01 | MsG0480020705.01 | 0.844126 | 9.170177e-59 | 1.466066e-55 |
| MsG0180003985.01 | MsG0480020705.01 | 0.800489 | 1.406853e-48 | 6.559206e-46 |
| MsG0180004163.01 | MsG0480020705.01 | 0.857011 | 2.181660e-62 | 5.307225e-59 |
| MsG0180004177.01 | MsG0480020705.01 | 0.812313 | 4.514108e-51 | 2.860563e-48 |
| MsG0180004292.01 | MsG0480020705.01 | 0.817390 | 3.380358e-52 | 2.458634e-49 |
| MsG0180004554.01 | MsG0480020705.01 | 0.837261 | 5.770796e-57 | 7.454740e-54 |
| MsG0180004634.01 | MsG0480020705.01 | 0.804324 | 2.281090e-49 | 1.172696e-46 |
| MsG0180004739.01 | MsG0480020705.01 | 0.849899 | 2.403975e-60 | 4.626619e-57 |
| MsG0180005269.01 | MsG0480020705.01 | 0.815041 | 1.132564e-51 | 7.724107e-49 |
| MsG0180005291.01 | MsG0480020705.01 | 0.848858 | 4.689339e-60 | 8.724095e-57 |
| MsG0180005431.01 | MsG0480020705.01 | 0.832184 | 1.092775e-55 | 1.212193e-52 |
| MsG0180005492.01 | MsG0480020705.01 | 0.812262 | 4.632885e-51 | 2.931833e-48 |
| MsG0180005760.01 | MsG0480020705.01 | 0.804589 | 2.008805e-49 | 1.039789e-46 |
| MsG0180005961.01 | MsG0480020705.01 | 0.810802 | 9.617368e-51 | 5.853827e-48 |
| MsG0180006042.01 | MsG0480020705.01 | 0.839544 | 1.487003e-57 | 2.060037e-54 |
| MsG0180006159.01 | MsG0480020705.01 | 0.841547 | 4.447219e-58 | 6.556974e-55 |
| MsG0180006200.01 | MsG0480020705.01 | 0.801763 | 7.723971e-49 | 3.718947e-46 |
| MsG0180006223.01 | MsG0480020705.01 | 0.837165 | 6.106122e-57 | 7.865198e-54 |
| MsG0280006307.01 | MsG0480020705.01 | 0.807901 | 4.029727e-50 | 2.271610e-47 |
| MsG0280006336.01 | MsG0480020705.01 | 0.818939 | 1.508461e-52 | 1.145039e-49 |
| MsG0280010661.01 | MsG0480020705.01 | 0.813894 | 2.031586e-51 | 1.343223e-48 |
| MsG0280010704.01 | MsG0480020705.01 | 0.827091 | 1.894888e-54 | 1.810875e-51 |
| MsG0280011162.01 | MsG0480020705.01 | 0.834569 | 2.778989e-56 | 3.311098e-53 |
| MsG0280011276.01 | MsG0480020705.01 | 0.836698 | 8.035719e-57 | 1.020604e-53 |
| MsG0380011896.01 | MsG0480020705.01 | 0.805521 | 1.282456e-49 | 6.799129e-47 |
| MsG0380012625.01 | MsG0480020705.01 | 0.815520 | 8.864262e-52 | 6.125494e-49 |
| MsG0380012780.01 | MsG0480020705.01 | 0.836113 | 1.131647e-56 | 1.412300e-53 |
| MsG0380012801.01 | MsG0480020705.01 | 0.825387 | 4.819409e-54 | 4.386297e-51 |
| MsG0380012876.01 | MsG0480020705.01 | 0.811696 | 6.154277e-51 | 3.835288e-48 |
| MsG0380014470.01 | MsG0480020705.01 | 0.823176 | 1.594688e-53 | 1.362961e-50 |
| MsG0380014709.01 | MsG0480020705.01 | 0.825951 | 3.543005e-54 | 3.277095e-51 |
| MsG0380014729.01 | MsG0480020705.01 | 0.818843 | 1.586388e-52 | 1.200886e-49 |
| MsG0480019376.01 | MsG0480020705.01 | 0.802357 | 5.829282e-49 | 2.849741e-46 |
| MsG0480019751.01 | MsG0480020705.01 | 0.801906 | 7.216776e-49 | 3.487659e-46 |
| MsG0480020151.01 | MsG0480020705.01 | 0.805479 | 1.308467e-49 | 6.929816e-47 |
| MsG0480020496.01 | MsG0480020705.01 | 0.828411 | 9.124100e-55 | 9.062281e-52 |
| MsG0480020691.01 | MsG0480020705.01 | 0.883733 | 3.493772e-71 | 2.242369e-67 |
| MsG0480020705.01 | MsG0480021039.01 | 0.804476 | 2.121519e-49 | 1.094891e-46 |
| MsG0480020705.01 | MsG0480021143.01 | 0.824750 | 6.815319e-54 | 6.091906e-51 |
| MsG0480020705.01 | MsG0480021254.01 | 0.843589 | 1.276736e-58 | 2.007239e-55 |
| MsG0480020705.01 | MsG0480021307.01 | 0.820160 | 7.941165e-53 | 6.235646e-50 |
| MsG0480020705.01 | MsG0480021317.01 | 0.808496 | 3.010409e-50 | 1.723897e-47 |
| MsG0480020705.01 | MsG0480021521.01 | 0.825743 | 3.969823e-54 | 3.650083e-51 |
| MsG0480020705.01 | MsG0480021682.01 | 0.836642 | 8.301980e-57 | 1.052559e-53 |
| MsG0480020705.01 | MsG0480021709.01 | 0.825718 | 4.024189e-54 | 3.697335e-51 |
| MsG0480020705.01 | MsG0480022286.01 | 0.832988 | 6.902278e-56 | 7.843068e-53 |
| MsG0480020705.01 | MsG0480022295.01 | 0.846578 | 1.989063e-59 | 3.439109e-56 |
| MsG0480020705.01 | MsG0480022366.01 | 0.860475 | 2.013142e-63 | 5.510019e-60 |
| MsG0480020705.01 | MsG0480022417.01 | 0.847065 | 1.463307e-59 | 2.570129e-56 |
| MsG0480020705.01 | MsG0480022466.01 | 0.831808 | 1.352863e-55 | 1.484484e-52 |
| MsG0480020705.01 | MsG0480022584.01 | 0.811311 | 7.461002e-51 | 4.602659e-48 |
| MsG0480020705.01 | MsG0480022837.01 | 0.804159 | 2.469574e-49 | 1.264232e-46 |
| MsG0480020705.01 | MsG0480023444.01 | 0.802368 | 5.799067e-49 | 2.835761e-46 |
| MsG0480020705.01 | MsG0480023483.01 | 0.801288 | 9.664237e-49 | 4.597891e-46 |
| MsG0480020705.01 | MsG0480023518.01 | -0.803681 | 3.104227e-49 | 1.569669e-46 |
| MsG0480020705.01 | MsG0480023558.01 | 0.827961 | 1.171469e-54 | 1.148377e-51 |
| MsG0480020705.01 | MsG0480023749.01 | 0.804608 | 1.990975e-49 | 1.031041e-46 |
| MsG0480020705.01 | MsG0480023993.01 | 0.811725 | 6.063228e-51 | 3.781830e-48 |
| MsG0480020705.01 | MsG0580024054.01 | 0.835831 | 1.334468e-56 | 1.651163e-53 |
| MsG0480020705.01 | MsG0580024128.01 | 0.811783 | 5.890510e-51 | 3.679570e-48 |
| MsG0480020705.01 | MsG0580024140.01 | 0.807953 | 3.929082e-50 | 2.217988e-47 |
| MsG0480020705.01 | MsG0580024327.01 | 0.805938 | 1.048331e-49 | 5.618005e-47 |
| MsG0480020705.01 | MsG0580024487.01 | 0.831826 | 1.339377e-55 | 1.470452e-52 |
| MsG0480020705.01 | MsG0580024571.01 | 0.839239 | 1.784503e-57 | 2.449367e-54 |
| MsG0480020705.01 | MsG0580024875.01 | 0.835151 | 1.983262e-56 | 2.404313e-53 |
| MsG0480020705.01 | MsG0580024950.01 | 0.833824 | 4.271392e-56 | 4.976743e-53 |
| MsG0480020705.01 | MsG0580025513.01 | 0.866809 | 2.173585e-65 | 7.423428e-62 |
| MsG0480020705.01 | MsG0580025997.01 | 0.801553 | 8.526666e-49 | 4.083856e-46 |
| MsG0480020705.01 | MsG0580026211.01 | 0.815778 | 7.765666e-52 | 5.404486e-49 |
| MsG0480020705.01 | MsG0580027887.01 | 0.842952 | 1.887747e-58 | 2.908365e-55 |
| MsG0480020705.01 | MsG0580028461.01 | 0.805715 | 1.167725e-49 | 6.222322e-47 |
| MsG0480020705.01 | MsG0580029816.01 | 0.819666 | 1.030513e-52 | 7.980471e-50 |
| MsG0480020705.01 | MsG0680030290.01 | 0.800412 | 1.458739e-48 | 6.788022e-46 |
| MsG0480020705.01 | MsG0680030477.01 | 0.829792 | 4.222450e-55 | 4.367045e-52 |
| MsG0480020705.01 | MsG0680032055.01 | 0.824634 | 7.256973e-54 | 6.465233e-51 |
| MsG0480020705.01 | MsG0680032840.01 | 0.827210 | 1.774126e-54 | 1.701437e-51 |
| MsG0480020705.01 | MsG0780036064.01 | 0.802858 | 4.594933e-49 | 2.275043e-46 |
| MsG0480020705.01 | MsG0780036507.01 | -0.803275 | 3.767194e-49 | 1.885178e-46 |
| MsG0480020705.01 | MsG0780036909.01 | 0.842087 | 3.203038e-58 | 4.803236e-55 |
| MsG0480020705.01 | MsG0780037734.01 | 0.814414 | 1.559575e-51 | 1.045841e-48 |
| MsG0480020705.01 | MsG0780038496.01 | 0.810760 | 9.818560e-51 | 5.969841e-48 |
| MsG0480020705.01 | MsG0780038807.01 | 0.832432 | 9.487134e-56 | 1.060161e-52 |
| MsG0480020705.01 | MsG0780038839.01 | 0.826515 | 2.599929e-54 | 2.443557e-51 |
| MsG0480020705.01 | MsG0780039422.01 | 0.830884 | 2.283831e-55 | 2.437989e-52 |
| MsG0480020705.01 | MsG0780039596.01 | 0.807260 | 5.512734e-50 | 3.056387e-47 |
| MsG0480020705.01 | MsG0780039746.01 | 0.804158 | 2.470335e-49 | 1.264591e-46 |
| MsG0480020705.01 | MsG0780040072.01 | 0.801928 | 7.144298e-49 | 3.454388e-46 |
| MsG0480020705.01 | MsG0780040159.01 | 0.820679 | 6.038086e-53 | 4.809394e-50 |
| MsG0480020705.01 | MsG0780040331.01 | 0.848511 | 5.849524e-60 | 1.076110e-56 |
| MsG0480020705.01 | MsG0780040352.01 | 0.828502 | 8.674551e-55 | 8.638457e-52 |
| MsG0480020705.01 | MsG0780040567.01 | 0.839334 | 1.686101e-57 | 2.321119e-54 |
| MsG0480020705.01 | MsG0780040644.01 | 0.826791 | 2.235028e-54 | 2.117214e-51 |
| MsG0480020705.01 | MsG0780040804.01 | 0.849525 | 3.057704e-60 | 5.812560e-57 |
| MsG0480020705.01 | MsG0780040833.01 | 0.814211 | 1.729278e-51 | 1.153170e-48 |
| MsG0480020705.01 | MsG0780040884.01 | 0.870326 | 1.587627e-66 | 6.151014e-63 |
| MsG0480020705.01 | MsG0780041035.01 | 0.803791 | 2.945374e-49 | 1.493628e-46 |
| MsG0480020705.01 | MsG0780041106.01 | 0.808432 | 3.106884e-50 | 1.776194e-47 |
| MsG0480020705.01 | MsG0780041174.01 | 0.810843 | 9.420250e-51 | 5.740313e-48 |
| MsG0480020705.01 | MsG0780041480.01 | 0.826065 | 3.327642e-54 | 3.087684e-51 |
| MsG0480020705.01 | MsG0880042889.01 | 0.847797 | 9.215002e-60 | 1.656687e-56 |
| MsG0480020705.01 | MsG0880043032.01 | 0.816351 | 5.783457e-52 | 4.088460e-49 |
| MsG0480020705.01 | MsG0880043148.01 | 0.801143 | 1.034551e-48 | 4.904195e-46 |
| MsG0480020705.01 | MsG0880044228.01 | 0.813976 | 1.948889e-51 | 1.291345e-48 |
| MsG0480020705.01 | MsG0880044352.01 | 0.852882 | 3.447120e-61 | 7.309134e-58 |
| MsG0480020705.01 | MsG0880044414.01 | 0.822404 | 2.412304e-53 | 2.017264e-50 |
| MsG0480020705.01 | MsG0880045252.01 | 0.800458 | 1.427863e-48 | 6.651695e-46 |
| MsG0480020705.01 | MsG0880045778.01 | 0.830467 | 2.889117e-55 | 3.046205e-52 |
| MsG0480020705.01 | MsG0880046041.01 | 0.842015 | 3.346369e-58 | 5.006577e-55 |
| MsG0480020705.01 | MsG0880046104.01 | 0.859972 | 2.855950e-63 | 7.682961e-60 |
| MsG0480020705.01 | MsG0880046252.01 | 0.810812 | 9.570347e-51 | 5.826694e-48 |
| MsG0480020705.01 | MsG0880046267.01 | 0.839869 | 1.224134e-57 | 1.713050e-54 |
| MsG0480020705.01 | MsG0880046462.01 | 0.803139 | 4.019478e-49 | 2.004402e-46 |
| MsG0480020705.01 | MsG0880047363.01 | 0.816731 | 4.753287e-52 | 3.395182e-49 |
| MsG0480020705.01 | MsG0880047392.01 | 0.804906 | 1.724778e-49 | 9.002034e-47 |
| MsG0480020705.01 | MsG0880047536.01 | 0.835509 | 1.610403e-56 | 1.973392e-53 |
| MsG0480020705.01 | MsG0880047567.01 | 0.854200 | 1.441828e-61 | 3.195563e-58 |
| MsG0480020705.01 | MsG0880047616.01 | 0.846997 | 1.527444e-59 | 2.676650e-56 |
| MsG0480020705.01 | MsG0880047628.01 | 0.804779 | 1.833980e-49 | 9.539939e-47 |
| MsG0480020705.01 | MsG0880047661.01 | 0.833101 | 6.472088e-56 | 7.379021e-53 |
| MsG0480020705.01 | MsG0880047723.01 | 0.809014 | 2.332784e-50 | 1.354163e-47 |
| MsG0380015081.01 | MsG0480020705.01 | 0.849635 | 2.849862e-60 | 5.437273e-57 |
| MsG0380015111.01 | MsG0480020705.01 | 0.837886 | 3.987902e-57 | 5.252271e-54 |
| MsG0380015356.01 | MsG0480020705.01 | 0.830932 | 2.222491e-55 | 2.376000e-52 |
| MsG0380015719.01 | MsG0480020705.01 | 0.808067 | 3.714929e-50 | 2.103454e-47 |
| MsG0380015742.01 | MsG0480020705.01 | 0.806852 | 6.724739e-50 | 3.689118e-47 |
| MsG0380015900.01 | MsG0480020705.01 | 0.836141 | 1.113160e-56 | 1.390448e-53 |
| MsG0380016362.01 | MsG0480020705.01 | 0.807516 | 4.865777e-50 | 2.715718e-47 |
| MsG0380016659.01 | MsG0480020705.01 | 0.813137 | 2.980529e-51 | 1.930410e-48 |
| MsG0380016699.01 | MsG0480020705.01 | 0.830404 | 2.993396e-55 | 3.150626e-52 |
| MsG0380016896.01 | MsG0480020705.01 | 0.818740 | 1.674307e-52 | 1.263752e-49 |
| MsG0380016957.01 | MsG0480020705.01 | 0.860919 | 1.475748e-63 | 4.101309e-60 |
| MsG0380016960.01 | MsG0480020705.01 | 0.813243 | 2.825299e-51 | 1.835129e-48 |
| MsG0380017018.01 | MsG0480020705.01 | 0.804075 | 2.570691e-49 | 1.313205e-46 |
| MsG0380017028.01 | MsG0480020705.01 | 0.838417 | 2.912287e-57 | 3.898238e-54 |
| MsG0380017100.01 | MsG0480020705.01 | 0.804429 | 2.169507e-49 | 1.118303e-46 |
| MsG0380017309.01 | MsG0480020705.01 | 0.852764 | 3.725412e-61 | 7.866897e-58 |
| MsG0380017472.01 | MsG0480020705.01 | 0.852074 | 5.858561e-61 | 1.210058e-57 |
| MsG0380017474.01 | MsG0480020705.01 | 0.852054 | 5.936309e-61 | 1.225339e-57 |
| MsG0380017651.01 | MsG0480020705.01 | 0.835988 | 1.217271e-56 | 1.513377e-53 |
| MsG0380017895.01 | MsG0480020705.01 | 0.807654 | 4.547165e-50 | 2.546917e-47 |
| MsG0380017966.01 | MsG0480020705.01 | 0.878956 | 1.845214e-69 | 9.823158e-66 |
| MsG0380018066.01 | MsG0480020705.01 | 0.830685 | 2.555265e-55 | 2.711801e-52 |
| MsG0480018190.01 | MsG0480020705.01 | 0.816845 | 4.481748e-52 | 3.211305e-49 |
| MsG0280006607.01 | MsG0480020705.01 | 0.814854 | 1.245944e-51 | 8.454411e-49 |
| MsG0280006805.01 | MsG0480020705.01 | 0.812532 | 4.042917e-51 | 2.577053e-48 |
| MsG0280006825.01 | MsG0480020705.01 | 0.840752 | 7.196810e-58 | 1.035175e-54 |
| MsG0280007136.01 | MsG0480020705.01 | 0.804966 | 1.676329e-49 | 8.762012e-47 |
| MsG0280007702.01 | MsG0480020705.01 | 0.807132 | 5.869874e-50 | 3.243369e-47 |
| MsG0280007831.01 | MsG0480020705.01 | 0.848446 | 6.098850e-60 | 1.119572e-56 |
| MsG0280008430.01 | MsG0480020705.01 | 0.821506 | 3.893761e-53 | 3.173675e-50 |
| MsG0280008591.01 | MsG0480020705.01 | 0.823486 | 1.349871e-53 | 1.163853e-50 |
| MsG0280008913.01 | MsG0480020705.01 | 0.824432 | 8.097986e-54 | 7.171205e-51 |
| MsG0280008935.01 | MsG0480020705.01 | 0.841106 | 5.810347e-58 | 8.448782e-55 |
| MsG0280010016.01 | MsG0480020705.01 | 0.806273 | 8.912280e-50 | 4.817226e-47 |
| MsG0280010356.01 | MsG0480020705.01 | 0.816738 | 4.737267e-52 | 3.384382e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020705.01.T01 | MTR_4g057240 | 87.500 | 200 | 4 | 1 | 1 | 179 | 1 | 200 | 2.64e-119 | 336 |
| MsG0480020705.01.T01 | MTR_7g114240 | 57.241 | 145 | 41 | 1 | 56 | 179 | 3 | 147 | 4.26e-50 | 159 |
| MsG0480020705.01.T01 | MTR_6g029200 | 49.315 | 146 | 52 | 2 | 56 | 179 | 9 | 154 | 3.51e-38 | 129 |
| MsG0480020705.01.T01 | MTR_6g029200 | 49.645 | 141 | 47 | 2 | 63 | 179 | 4 | 144 | 1.25e-36 | 124 |
| MsG0480020705.01.T01 | MTR_7g114240 | 46.535 | 101 | 33 | 1 | 56 | 135 | 3 | 103 | 7.44e-23 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020705.01.T01 | AT2G28190 | 63.415 | 205 | 45 | 3 | 3 | 179 | 8 | 210 | 7.48e-77 | 229 |
| MsG0480020705.01.T01 | AT1G08830 | 55.862 | 145 | 43 | 1 | 56 | 179 | 3 | 147 | 8.27e-47 | 150 |
| MsG0480020705.01.T01 | AT1G08830 | 55.862 | 145 | 43 | 1 | 56 | 179 | 3 | 147 | 8.27e-47 | 150 |
| MsG0480020705.01.T01 | AT5G18100 | 48.276 | 145 | 54 | 1 | 56 | 179 | 9 | 153 | 7.28e-40 | 133 |
| MsG0480020705.01.T01 | AT5G18100 | 45.238 | 126 | 48 | 1 | 56 | 160 | 9 | 134 | 1.90e-29 | 105 |
Find 58 sgRNAs with CRISPR-Local
Find 139 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAACTGCAACAGCTTTCT+TGG | 0.257195 | 4:+46680595 | None:intergenic |
| GGCCTTACTCCAGGGCTTCA+TGG | 0.278416 | 4:-46679744 | MsG0480020705.01.T01:CDS |
| AACGGAGAGAGGCTGGAATT+TGG | 0.292602 | 4:+46680628 | None:intergenic |
| GGCTCTCCCAATGACTGAAT+TGG | 0.294518 | 4:+46679065 | None:intergenic |
| GAAAGCTGTTGCAGTTCTTA+AGG | 0.327591 | 4:-46680591 | MsG0480020705.01.T01:CDS |
| GCTCTCCCAATGACTGAATT+GGG | 0.359785 | 4:+46679066 | None:intergenic |
| GCATGACGGATTTCATCTTC+AGG | 0.389426 | 4:+46679425 | None:intergenic |
| AAAGCTGTTGCAGTTCTTAA+GGG | 0.393106 | 4:-46680590 | MsG0480020705.01.T01:CDS |
| GGCAACAATCGTTGACAATC+AGG | 0.399165 | 4:-46679268 | MsG0480020705.01.T01:intron |
| CGTATCACTGGCCTTACTCC+AGG | 0.406214 | 4:-46679753 | MsG0480020705.01.T01:CDS |
| TTGTTAGGTGCATGAAGATT+AGG | 0.415191 | 4:+46680765 | None:intergenic |
| GAGTGAGAAGTGAGTGGCGA+AGG | 0.415982 | 4:+46680719 | None:intergenic |
| ACTGGCCCCAATTCAGTCAT+TGG | 0.417542 | 4:-46679072 | MsG0480020705.01.T01:CDS |
| AATCCGTCATGCGGGTGACC+TGG | 0.434387 | 4:-46679414 | MsG0480020705.01.T01:CDS |
| AACCATGAAGCCCTGGAGTA+AGG | 0.443025 | 4:+46679742 | None:intergenic |
| CAGCAACAACGGAGAGAGGC+TGG | 0.455953 | 4:+46680621 | None:intergenic |
| AGTCATTGGGAGAGCCTTAG+TGG | 0.466496 | 4:-46679058 | MsG0480020705.01.T01:CDS |
| AAGGGTAACTCCACTGTTGA+AGG | 0.471786 | 4:-46680572 | MsG0480020705.01.T01:CDS |
| CTGGCCCCAATTCAGTCATT+GGG | 0.477587 | 4:-46679071 | MsG0480020705.01.T01:CDS |
| CTTGAAGATGACCTTGGAAA+GGG | 0.496504 | 4:-46679027 | MsG0480020705.01.T01:intron |
| CATCAGCAATTATGTTTCCC+AGG | 0.498669 | 4:+46679396 | None:intergenic |
| ACAGTCAATGTTCGTATCAC+TGG | 0.500510 | 4:-46679765 | MsG0480020705.01.T01:CDS |
| ATACGAACATTGACTGTTGT+TGG | 0.508293 | 4:+46679771 | None:intergenic |
| CTGGAATTTGGAACGCGAAA+GGG | 0.512711 | 4:+46680640 | None:intergenic |
| CTTCTCCGATCATCTTTCTC+CGG | 0.517355 | 4:-46680695 | MsG0480020705.01.T01:CDS |
| GAGAGTGTGACGCCATTGTT+AGG | 0.519424 | 4:+46680750 | None:intergenic |
| ATCCGTCATGCGGGTGACCT+GGG | 0.530041 | 4:-46679413 | MsG0480020705.01.T01:CDS |
| CGCGAAAGGGTTGAGAATTG+AGG | 0.534704 | 4:+46680653 | None:intergenic |
| AGTTTGAGCACTGGAAATGC+CGG | 0.542289 | 4:-46678705 | MsG0480020705.01.T01:CDS |
| CATGAACTTAGTTTGAGCAC+TGG | 0.549851 | 4:-46678714 | MsG0480020705.01.T01:CDS |
| GTATCACTGGCCTTACTCCA+GGG | 0.550072 | 4:-46679752 | MsG0480020705.01.T01:CDS |
| AGGTGAAAACCATGAAGCCC+TGG | 0.553380 | 4:+46679735 | None:intergenic |
| TTCAAGCTCATGAACCACTA+AGG | 0.558296 | 4:+46679044 | None:intergenic |
| CATGAGCTTGAAGATGACCT+TGG | 0.559793 | 4:-46679033 | MsG0480020705.01.T01:CDS |
| GAAGATGAAATCCGTCATGC+GGG | 0.564092 | 4:-46679422 | MsG0480020705.01.T01:CDS |
| GCTGGAATTTGGAACGCGAA+AGG | 0.574919 | 4:+46680639 | None:intergenic |
| AGAGAGCTTGACGGAGACGC+CGG | 0.577978 | 4:+46680676 | None:intergenic |
| AGTAACAACACCTTCAACAG+TGG | 0.579962 | 4:+46680562 | None:intergenic |
| GCTTGAAGATGACCTTGGAA+AGG | 0.581249 | 4:-46679028 | MsG0480020705.01.T01:CDS |
| GAATTGAGGAGAGAGCTTGA+CGG | 0.581862 | 4:+46680667 | None:intergenic |
| AACATAATTGCTGATGCCAA+CGG | 0.589398 | 4:-46679389 | MsG0480020705.01.T01:intron |
| GGATGAACTAACCCTTTCCA+AGG | 0.593520 | 4:+46679016 | None:intergenic |
| GTGAAACACAGGCGTTGCAG+AGG | 0.609173 | 4:-46679289 | MsG0480020705.01.T01:intron |
| TTTCTTGGCAGCAGCAACAA+CGG | 0.616837 | 4:+46680610 | None:intergenic |
| GCAGCAGCAACAACGGAGAG+AGG | 0.618791 | 4:+46680617 | None:intergenic |
| CTCTCCCAATGACTGAATTG+GGG | 0.619637 | 4:+46679067 | None:intergenic |
| ACCACAGGCTAATCTTCCAC+CGG | 0.621370 | 4:+46678686 | None:intergenic |
| AATCTTCATGCACCTAACAA+TGG | 0.624185 | 4:-46680762 | MsG0480020705.01.T01:exon |
| AATCCTAACCAGTTGACACA+CGG | 0.627360 | 4:-46679452 | MsG0480020705.01.T01:intron |
| TTCCCAGGTCACCCGCATGA+CGG | 0.629118 | 4:+46679411 | None:intergenic |
| TGAAGATGAAATCCGTCATG+CGG | 0.631482 | 4:-46679423 | MsG0480020705.01.T01:CDS |
| ATCATGCAGATACCACTCAC+TGG | 0.634234 | 4:-46679090 | MsG0480020705.01.T01:intron |
| AGACGCCGGAGAAAGATGAT+CGG | 0.638557 | 4:+46680690 | None:intergenic |
| TTGAGCACTGGAAATGCCGG+TGG | 0.645778 | 4:-46678702 | MsG0480020705.01.T01:CDS |
| AGAAGAGAGTGAGAAGTGAG+TGG | 0.648773 | 4:+46680713 | None:intergenic |
| ACTGAATTGGGGCCAGTGAG+TGG | 0.664251 | 4:+46679078 | None:intergenic |
| GCCGGTGGAAGATTAGCCTG+TGG | 0.696428 | 4:-46678687 | MsG0480020705.01.T01:CDS |
| ACTCTTACTCAAGAAAACGA+AGG | 0.698943 | 4:-46680542 | MsG0480020705.01.T01:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAATAAATATATAAAA+TGG | + | Chr4:46680526-46680545 | None:intergenic | 0.0% |
| !!! | AAATATAAAGGTACAAAAAA+TGG | + | Chr4:46679971-46679990 | None:intergenic | 15.0% |
| !!! | AACTAAATAAACAATTTTGA+AGG | + | Chr4:46679833-46679852 | None:intergenic | 15.0% |
| !!! | ACTGTTTTAATATAATCTAT+AGG | - | Chr4:46679282-46679301 | MsG0480020705.01.T01:intron | 15.0% |
| !!! | TTATTTTCCTCTAAAAAATA+TGG | - | Chr4:46679867-46679886 | MsG0480020705.01.T01:intron | 15.0% |
| !! | AATGCATTATGAATCTTTAT+AGG | - | Chr4:46679119-46679138 | MsG0480020705.01.T01:intron | 20.0% |
| !! | ATCAATTATCGATAATAGTT+TGG | - | Chr4:46679040-46679059 | MsG0480020705.01.T01:CDS | 20.0% |
| !! | ATCCAATAATCTTATGAAAA+CGG | + | Chr4:46679377-46679396 | None:intergenic | 20.0% |
| !! | CCATTATCTATTGTTTATTT+GGG | + | Chr4:46680608-46680627 | None:intergenic | 20.0% |
| !! | GATTATGAGTAATTGAAATT+TGG | - | Chr4:46679084-46679103 | MsG0480020705.01.T01:CDS | 20.0% |
| !!! | TAAAACACCATATTTTTTAG+AGG | + | Chr4:46679877-46679896 | None:intergenic | 20.0% |
| !!! | TATGAATCTTTATAGGTTTT+GGG | - | Chr4:46679126-46679145 | MsG0480020705.01.T01:intron | 20.0% |
| !!! | TTATGAATCTTTATAGGTTT+TGG | - | Chr4:46679125-46679144 | MsG0480020705.01.T01:intron | 20.0% |
| ! | AAAAAATGGAAACTAAGGTT+AGG | + | Chr4:46679957-46679976 | None:intergenic | 25.0% |
| ! | ACCATAGGAACAAAATATAA+AGG | + | Chr4:46679983-46680002 | None:intergenic | 25.0% |
| ! | ATATGAACTTGTCTTGATTT+GGG | - | Chr4:46679167-46679186 | MsG0480020705.01.T01:intron | 25.0% |
| ! | ATTGTTTATTTGGGTAATAC+AGG | + | Chr4:46680599-46680618 | None:intergenic | 25.0% |
| ! | CCCAAATAAACAATAGATAA+TGG | - | Chr4:46680605-46680624 | MsG0480020705.01.T01:CDS | 25.0% |
| ! | GAATGACATGAATATGAAAT+TGG | - | Chr4:46680646-46680665 | MsG0480020705.01.T01:CDS | 25.0% |
| ! | GCCATTATCTATTGTTTATT+TGG | + | Chr4:46680609-46680628 | None:intergenic | 25.0% |
| !! | ACCTTTATATTTTGTTCCTA+TGG | - | Chr4:46679979-46679998 | MsG0480020705.01.T01:intron | 25.0% |
| !! | TATATTTTGTTCCTATGGTT+TGG | - | Chr4:46679984-46680003 | MsG0480020705.01.T01:intron | 25.0% |
| !!! | ATAAACAATTTTGAAGGAAG+AGG | + | Chr4:46679827-46679846 | None:intergenic | 25.0% |
| !!! | CGATAATAGTTTGGTTTTTT+TGG | - | Chr4:46679049-46679068 | MsG0480020705.01.T01:CDS | 25.0% |
| !!! | TAACTGCAGTATTTTTACTT+TGG | - | Chr4:46680746-46680765 | MsG0480020705.01.T01:CDS | 25.0% |
| !!! | TAATTAAGAAGAGCATGTTT+TGG | + | Chr4:46679624-46679643 | None:intergenic | 25.0% |
| !!! | TCGATAATTGATAACGAAAA+TGG | + | Chr4:46679032-46679051 | None:intergenic | 25.0% |
| !!! | TGTAGCTATTTGTTTTTTTG+TGG | - | Chr4:46679714-46679733 | MsG0480020705.01.T01:intron | 25.0% |
| AACGAAAATGGAGAATTGAA+CGG | + | Chr4:46679020-46679039 | None:intergenic | 30.0% | |
| AAGTTATTCCATAGAGCTTA+TGG | - | Chr4:46679492-46679511 | MsG0480020705.01.T01:intron | 30.0% | |
| CATATGAACTTGTCTTGATT+TGG | - | Chr4:46679166-46679185 | MsG0480020705.01.T01:intron | 30.0% | |
| GGTACAAAAAATGGAAACTA+AGG | + | Chr4:46679962-46679981 | None:intergenic | 30.0% | |
| TCTTAAGTATACTGTATACG+TGG | - | Chr4:46679654-46679673 | MsG0480020705.01.T01:intron | 30.0% | |
| ! | GCTTCTTGAATCTCTTATTT+AGG | - | Chr4:46680033-46680052 | MsG0480020705.01.T01:intron | 30.0% |
| !! | AGCCGTTTTCATAAGATTAT+TGG | - | Chr4:46679372-46679391 | MsG0480020705.01.T01:intron | 30.0% |
| !!! | GTTTTTTTGGTTAGTGAGAA+TGG | - | Chr4:46679062-46679081 | MsG0480020705.01.T01:CDS | 30.0% |
| !!! | TTGTTTTTTTGTGGATGAGT+AGG | - | Chr4:46679723-46679742 | MsG0480020705.01.T01:intron | 30.0% |
| !!! | TTTTTGTTGTTGTGAAACAC+AGG | - | Chr4:46680218-46680237 | MsG0480020705.01.T01:intron | 30.0% |
| AAAGCTGTTGCAGTTCTTAA+GGG | - | Chr4:46678928-46678947 | MsG0480020705.01.T01:intron | 35.0% | |
| AACATAATTGCTGATGCCAA+CGG | - | Chr4:46680129-46680148 | MsG0480020705.01.T01:intron | 35.0% | |
| AACTGGTTAGGATTGAAATG+TGG | + | Chr4:46680060-46680079 | None:intergenic | 35.0% | |
| AATCTTCATGCACCTAACAA+TGG | - | Chr4:46678756-46678775 | MsG0480020705.01.T01:intron | 35.0% | |
| ACGAAAATGGAGAATTGAAC+GGG | + | Chr4:46679019-46679038 | None:intergenic | 35.0% | |
| ACTCTTACTCAAGAAAACGA+AGG | - | Chr4:46678976-46678995 | MsG0480020705.01.T01:intron | 35.0% | |
| ATAATGGCTACATATCACAG+GGG | - | Chr4:46680621-46680640 | MsG0480020705.01.T01:CDS | 35.0% | |
| ATGTAAACAAGCATTACCGT+TGG | + | Chr4:46680148-46680167 | None:intergenic | 35.0% | |
| ATTGAACGGGATTAAGAAGA+TGG | + | Chr4:46679006-46679025 | None:intergenic | 35.0% | |
| GCTTATTTCCATAAGCTCTA+TGG | + | Chr4:46679503-46679522 | None:intergenic | 35.0% | |
| GTTTATTTGAGCTTGTCTAC+CGG | + | Chr4:46679597-46679616 | None:intergenic | 35.0% | |
| TAAATCAGAATTAGACCCAC+TGG | + | Chr4:46680347-46680366 | None:intergenic | 35.0% | |
| TTAAGCTCGTTATCCAAACA+TGG | + | Chr4:46679193-46679212 | None:intergenic | 35.0% | |
| TTGAACGGGATTAAGAAGAT+GGG | + | Chr4:46679005-46679024 | None:intergenic | 35.0% | |
| TTGTTAGGTGCATGAAGATT+AGG | + | Chr4:46678756-46678775 | None:intergenic | 35.0% | |
| ! | AAGTAGCTAACTGTGTTGTT+TGG | - | Chr4:46680401-46680420 | MsG0480020705.01.T01:intron | 35.0% |
| ! | ACAGTTAGCTACTTTCAACA+AGG | + | Chr4:46680395-46680414 | None:intergenic | 35.0% |
| ! | AGATAATGGCTACATATCAC+AGG | - | Chr4:46680619-46680638 | MsG0480020705.01.T01:CDS | 35.0% |
| ! | ATACGAACATTGACTGTTGT+TGG | + | Chr4:46679750-46679769 | None:intergenic | 35.0% |
| ! | GATAATGGCTACATATCACA+GGG | - | Chr4:46680620-46680639 | MsG0480020705.01.T01:CDS | 35.0% |
| !! | AAGAAGAGCATGTTTTGGAT+TGG | + | Chr4:46679619-46679638 | None:intergenic | 35.0% |
| !! | GTTGTTTTCATATGCTATCC+TGG | - | Chr4:46679304-46679323 | MsG0480020705.01.T01:intron | 35.0% |
| !! | TTTGTTCCTATGGTTTGGTT+TGG | - | Chr4:46679989-46680008 | MsG0480020705.01.T01:intron | 35.0% |
| AAATCACTTGTGAGGCTGTT+TGG | + | Chr4:46679572-46679591 | None:intergenic | 40.0% | |
| AACTATAGTTCTTCTGCCAG+TGG | - | Chr4:46680328-46680347 | MsG0480020705.01.T01:intron | 40.0% | |
| AAGAACTGCAACAGCTTTCT+TGG | + | Chr4:46678926-46678945 | None:intergenic | 40.0% | |
| AATCACTTGTGAGGCTGTTT+GGG | + | Chr4:46679571-46679590 | None:intergenic | 40.0% | |
| AATCCTAACCAGTTGACACA+CGG | - | Chr4:46680066-46680085 | MsG0480020705.01.T01:intron | 40.0% | |
| ACAGTCAATGTTCGTATCAC+TGG | - | Chr4:46679753-46679772 | MsG0480020705.01.T01:CDS | 40.0% | |
| ACTATAGTTCTTCTGCCAGT+GGG | - | Chr4:46680329-46680348 | MsG0480020705.01.T01:intron | 40.0% | |
| AGTAACAACACCTTCAACAG+TGG | + | Chr4:46678959-46678978 | None:intergenic | 40.0% | |
| AGTATGGTGATACCACCAAT+GGG | - | Chr4:46679909-46679928 | MsG0480020705.01.T01:intron | 40.0% | |
| ATGCTATCCTGGAGAGATTA+TGG | - | Chr4:46679315-46679334 | MsG0480020705.01.T01:intron | 40.0% | |
| CATCAGCAATTATGTTTCCC+AGG | + | Chr4:46680125-46680144 | None:intergenic | 40.0% | |
| CCTCTGCGTTGAAAACTTTA+TGG | - | Chr4:46680169-46680188 | MsG0480020705.01.T01:intron | 40.0% | |
| CTCATTTCCATAATCTCTCC+AGG | + | Chr4:46679325-46679344 | None:intergenic | 40.0% | |
| CTGGAGAGATTATGGAAATG+AGG | - | Chr4:46679323-46679342 | MsG0480020705.01.T01:intron | 40.0% | |
| CTTGAAGATGACCTTGGAAA+GGG | - | Chr4:46680491-46680510 | MsG0480020705.01.T01:intron | 40.0% | |
| GAAAGCTGTTGCAGTTCTTA+AGG | - | Chr4:46678927-46678946 | MsG0480020705.01.T01:intron | 40.0% | |
| TACCGGAAAAATCACTTGTG+AGG | + | Chr4:46679580-46679599 | None:intergenic | 40.0% | |
| TGAAGATGAAATCCGTCATG+CGG | - | Chr4:46680095-46680114 | MsG0480020705.01.T01:intron | 40.0% | |
| TTCAAGCTCATGAACCACTA+AGG | + | Chr4:46680477-46680496 | None:intergenic | 40.0% | |
| TTTATCTTGCAGCACGAGTA+TGG | - | Chr4:46679893-46679912 | MsG0480020705.01.T01:intron | 40.0% | |
| ! | AGCCTCACAAGTGATTTTTC+CGG | - | Chr4:46679575-46679594 | MsG0480020705.01.T01:intron | 40.0% |
| ! | CATGAACTTAGTTTGAGCAC+TGG | - | Chr4:46680804-46680823 | MsG0480020705.01.T01:five_prime_UTR | 40.0% |
| ! | CCATAAAGTTTTCAACGCAG+AGG | + | Chr4:46680172-46680191 | None:intergenic | 40.0% |
| AAGGGTAACTCCACTGTTGA+AGG | - | Chr4:46678946-46678965 | MsG0480020705.01.T01:intron | 45.0% | |
| AGAAGAGAGTGAGAAGTGAG+TGG | + | Chr4:46678808-46678827 | None:intergenic | 45.0% | |
| ATCATGCAGATACCACTCAC+TGG | - | Chr4:46680428-46680447 | MsG0480020705.01.T01:intron | 45.0% | |
| CATGAGCTTGAAGATGACCT+TGG | - | Chr4:46680485-46680504 | MsG0480020705.01.T01:intron | 45.0% | |
| CTCTCCCAATGACTGAATTG+GGG | + | Chr4:46680454-46680473 | None:intergenic | 45.0% | |
| CTTCAGCCAAACCAAACCAT+AGG | + | Chr4:46679998-46680017 | None:intergenic | 45.0% | |
| CTTCTCCGATCATCTTTCTC+CGG | - | Chr4:46678823-46678842 | MsG0480020705.01.T01:intron | 45.0% | |
| GAAGATGAAATCCGTCATGC+GGG | - | Chr4:46680096-46680115 | MsG0480020705.01.T01:intron | 45.0% | |
| GAATTGAGGAGAGAGCTTGA+CGG | + | Chr4:46678854-46678873 | None:intergenic | 45.0% | |
| GAGTATGGTGATACCACCAA+TGG | - | Chr4:46679908-46679927 | MsG0480020705.01.T01:intron | 45.0% | |
| GCTCTCCCAATGACTGAATT+GGG | + | Chr4:46680455-46680474 | None:intergenic | 45.0% | |
| GCTTGAAGATGACCTTGGAA+AGG | - | Chr4:46680490-46680509 | MsG0480020705.01.T01:intron | 45.0% | |
| GGATGAACTAACCCTTTCCA+AGG | + | Chr4:46680505-46680524 | None:intergenic | 45.0% | |
| GGCAACAATCGTTGACAATC+AGG | - | Chr4:46680250-46680269 | MsG0480020705.01.T01:intron | 45.0% | |
| TTTCTTGGCAGCAGCAACAA+CGG | + | Chr4:46678911-46678930 | None:intergenic | 45.0% | |
| ! | CTGGAATTTGGAACGCGAAA+GGG | + | Chr4:46678881-46678900 | None:intergenic | 45.0% |
| !! | AGTTTGAGCACTGGAAATGC+CGG | - | Chr4:46680813-46680832 | MsG0480020705.01.T01:five_prime_UTR | 45.0% |
| !! | GCATGACGGATTTCATCTTC+AGG | + | Chr4:46680096-46680115 | None:intergenic | 45.0% |
| !! | GTCTTGATTTGGGCCATGTT+TGG | - | Chr4:46679177-46679196 | MsG0480020705.01.T01:intron | 45.0% |
| AACCATGAAGCCCTGGAGTA+AGG | + | Chr4:46679779-46679798 | None:intergenic | 50.0% | |
| AACGGAGAGAGGCTGGAATT+TGG | + | Chr4:46678893-46678912 | None:intergenic | 50.0% | |
| ACCAATGGGTGTATCTCGAC+AGG | - | Chr4:46679923-46679942 | MsG0480020705.01.T01:intron | 50.0% | |
| ACCACAGGCTAATCTTCCAC+CGG | + | Chr4:46680835-46680854 | None:intergenic | 50.0% | |
| ACCTGTCGAGATACACCCAT+TGG | + | Chr4:46679927-46679946 | None:intergenic | 50.0% | |
| ACTGGCCCCAATTCAGTCAT+TGG | - | Chr4:46680446-46680465 | MsG0480020705.01.T01:intron | 50.0% | |
| AGACGCCGGAGAAAGATGAT+CGG | + | Chr4:46678831-46678850 | None:intergenic | 50.0% | |
| AGGTGAAAACCATGAAGCCC+TGG | + | Chr4:46679786-46679805 | None:intergenic | 50.0% | |
| AGTCATTGGGAGAGCCTTAG+TGG | - | Chr4:46680460-46680479 | MsG0480020705.01.T01:intron | 50.0% | |
| ATGGCTACATATCACAGGGG+AGG | - | Chr4:46680624-46680643 | MsG0480020705.01.T01:CDS | 50.0% | |
| CGCGAAAGGGTTGAGAATTG+AGG | + | Chr4:46678868-46678887 | None:intergenic | 50.0% | |
| CTGGCCCCAATTCAGTCATT+GGG | - | Chr4:46680447-46680466 | MsG0480020705.01.T01:intron | 50.0% | |
| GCATCTGCTCGTACTTATGC+AGG | - | Chr4:46680777-46680796 | MsG0480020705.01.T01:exon | 50.0% | |
| GGCTCTCCCAATGACTGAAT+TGG | + | Chr4:46680456-46680475 | None:intergenic | 50.0% | |
| TCTGCTCGTACTTATGCAGG+TGG | - | Chr4:46680780-46680799 | MsG0480020705.01.T01:five_prime_UTR | 50.0% | |
| TGTCGAGATACACCCATTGG+TGG | + | Chr4:46679924-46679943 | None:intergenic | 50.0% | |
| ! | AGGGCTTCATGGTTTTCACC+TGG | - | Chr4:46679785-46679804 | MsG0480020705.01.T01:intron | 50.0% |
| ! | GAGAGTGTGACGCCATTGTT+AGG | + | Chr4:46678771-46678790 | None:intergenic | 50.0% |
| ! | GCTGGAATTTGGAACGCGAA+AGG | + | Chr4:46678882-46678901 | None:intergenic | 50.0% |
| ! | GGCATGAAGTATCACTCACC+AGG | + | Chr4:46679806-46679825 | None:intergenic | 50.0% |
| !! | GTATCACTGGCCTTACTCCA+GGG | - | Chr4:46679766-46679785 | MsG0480020705.01.T01:CDS | 50.0% |
| ACTGAATTGGGGCCAGTGAG+TGG | + | Chr4:46680443-46680462 | None:intergenic | 55.0% | |
| GAGTGAGAAGTGAGTGGCGA+AGG | + | Chr4:46678802-46678821 | None:intergenic | 55.0% | |
| GCACCGTGTGTCAACTGGTT+AGG | + | Chr4:46680072-46680091 | None:intergenic | 55.0% | |
| ! | GTGAAACACAGGCGTTGCAG+AGG | - | Chr4:46680229-46680248 | MsG0480020705.01.T01:intron | 55.0% |
| !! | CGTATCACTGGCCTTACTCC+AGG | - | Chr4:46679765-46679784 | MsG0480020705.01.T01:CDS | 55.0% |
| !! | TTGAGCACTGGAAATGCCGG+TGG | - | Chr4:46680816-46680835 | MsG0480020705.01.T01:five_prime_UTR | 55.0% |
| AATCCGTCATGCGGGTGACC+TGG | - | Chr4:46680104-46680123 | MsG0480020705.01.T01:intron | 60.0% | |
| AGAGAGCTTGACGGAGACGC+CGG | + | Chr4:46678845-46678864 | None:intergenic | 60.0% | |
| ATCCGTCATGCGGGTGACCT+GGG | - | Chr4:46680105-46680124 | MsG0480020705.01.T01:intron | 60.0% | |
| CAGCAACAACGGAGAGAGGC+TGG | + | Chr4:46678900-46678919 | None:intergenic | 60.0% | |
| GCAGCAGCAACAACGGAGAG+AGG | + | Chr4:46678904-46678923 | None:intergenic | 60.0% | |
| GGCCTTACTCCAGGGCTTCA+TGG | - | Chr4:46679774-46679793 | MsG0480020705.01.T01:CDS | 60.0% | |
| TTCCCAGGTCACCCGCATGA+CGG | + | Chr4:46680110-46680129 | None:intergenic | 60.0% | |
| !! | CAGGAGCACCGTGTGTCAAC+TGG | + | Chr4:46680077-46680096 | None:intergenic | 60.0% |
| !! | GCCGGTGGAAGATTAGCCTG+TGG | - | Chr4:46680831-46680850 | MsG0480020705.01.T01:five_prime_UTR | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 46678680 | 46680860 | 46678680 | ID=MsG0480020705.01;Name=MsG0480020705.01 |
| Chr4 | mRNA | 46678680 | 46680860 | 46678680 | ID=MsG0480020705.01.T01;Parent=MsG0480020705.01;Name=MsG0480020705.01.T01;_AED=0.49;_eAED=0.49;_QI=83|0.8|0.66|1|1|1|6|0|179 |
| Chr4 | exon | 46678680 | 46678741 | 46678680 | ID=MsG0480020705.01.T01:exon:28071;Parent=MsG0480020705.01.T01 |
| Chr4 | exon | 46679028 | 46679103 | 46679028 | ID=MsG0480020705.01.T01:exon:28070;Parent=MsG0480020705.01.T01 |
| Chr4 | exon | 46679269 | 46679300 | 46679269 | ID=MsG0480020705.01.T01:exon:28069;Parent=MsG0480020705.01.T01 |
| Chr4 | exon | 46679390 | 46679462 | 46679390 | ID=MsG0480020705.01.T01:exon:28068;Parent=MsG0480020705.01.T01 |
| Chr4 | exon | 46679734 | 46679795 | 46679734 | ID=MsG0480020705.01.T01:exon:28067;Parent=MsG0480020705.01.T01 |
| Chr4 | exon | 46680543 | 46680860 | 46680543 | ID=MsG0480020705.01.T01:exon:28066;Parent=MsG0480020705.01.T01 |
| Chr4 | five_prime_UTR | 46680778 | 46680860 | 46680778 | ID=MsG0480020705.01.T01:five_prime_utr;Parent=MsG0480020705.01.T01 |
| Chr4 | CDS | 46680543 | 46680777 | 46680543 | ID=MsG0480020705.01.T01:cds;Parent=MsG0480020705.01.T01 |
| Chr4 | CDS | 46679734 | 46679795 | 46679734 | ID=MsG0480020705.01.T01:cds;Parent=MsG0480020705.01.T01 |
| Chr4 | CDS | 46679390 | 46679462 | 46679390 | ID=MsG0480020705.01.T01:cds;Parent=MsG0480020705.01.T01 |
| Chr4 | CDS | 46679269 | 46679300 | 46679269 | ID=MsG0480020705.01.T01:cds;Parent=MsG0480020705.01.T01 |
| Chr4 | CDS | 46679028 | 46679103 | 46679028 | ID=MsG0480020705.01.T01:cds;Parent=MsG0480020705.01.T01 |
| Chr4 | CDS | 46678680 | 46678741 | 46678680 | ID=MsG0480020705.01.T01:cds;Parent=MsG0480020705.01.T01 |
| Gene Sequence |
| Protein sequence |
