Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0049760 | XP_024638226.1 | 98.380 | 679 | 8 | 2 | 1 | 678 | 1 | 677 | 0.0 | 1374 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0049760 | sp|Q9CAN3|SCL28_ARATH | 55.635 | 701 | 226 | 23 | 1 | 663 | 1 | 654 | 0.0 | 685 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0049760 | A0A072URL3 | 98.380 | 679 | 8 | 2 | 1 | 678 | 1 | 677 | 0.0 | 1374 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0049760 | TF | GRAS |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016040 | Msa0049760 | 0.819048 | 1.424659e-52 | -8.615850e-47 |
| Msa0025580 | Msa0049760 | 0.811710 | 6.108391e-51 | -8.615850e-47 |
| Msa0027280 | Msa0049760 | 0.819608 | 1.062401e-52 | -8.615850e-47 |
| Msa0030370 | Msa0049760 | 0.812119 | 4.976308e-51 | -8.615850e-47 |
| Msa0034210 | Msa0049760 | 0.801052 | 1.080140e-48 | -8.615850e-47 |
| Msa0048510 | Msa0049760 | 0.834068 | 3.710073e-56 | -8.615850e-47 |
| Msa0049760 | Msa0054690 | 0.839393 | 1.627298e-57 | -8.615850e-47 |
| Msa0049760 | Msa0073120 | 0.809627 | 1.723148e-50 | -8.615850e-47 |
| Msa0049760 | Msa0077560 | 0.823977 | 1.036029e-53 | -8.615850e-47 |
| Msa0049760 | Msa0081570 | 0.806699 | 7.245737e-50 | -8.615850e-47 |
| Msa0049760 | Msa0094780 | 0.824865 | 6.403762e-54 | -8.615850e-47 |
| Msa0049760 | Msa0121330 | 0.815505 | 8.931031e-52 | -8.615850e-47 |
| Msa0049760 | Msa0122330 | 0.821462 | 3.986751e-53 | -8.615850e-47 |
| Msa0049760 | Msa0123070 | 0.825185 | 5.381179e-54 | -8.615850e-47 |
| Msa0049760 | Msa0128310 | 0.820723 | 5.900560e-53 | -8.615850e-47 |
| Msa0049760 | Msa0133150 | 0.809789 | 1.590434e-50 | -8.615850e-47 |
| Msa0049760 | Msa0140280 | 0.812148 | 4.906033e-51 | -8.615850e-47 |
| Msa0049760 | Msa0173730 | 0.810717 | 1.003042e-50 | -8.615850e-47 |
| Msa0049760 | Msa0173810 | 0.819762 | 9.795837e-53 | -8.615850e-47 |
| Msa0049760 | Msa0174440 | 0.813046 | 3.120017e-51 | -8.615850e-47 |
| Msa0049760 | Msa0190570 | 0.846351 | 2.293771e-59 | -8.615850e-47 |
| Msa0049760 | Msa0190730 | 0.803730 | 3.032041e-49 | -8.615850e-47 |
| Msa0049760 | Msa0200050 | 0.844502 | 7.267563e-59 | -8.615850e-47 |
| Msa0049760 | Msa0213030 | 0.816530 | 5.273080e-52 | -8.615850e-47 |
| Msa0049760 | Msa0225860 | 0.820394 | 7.021987e-53 | -8.615850e-47 |
| Msa0049760 | Msa0230800 | 0.803069 | 4.155650e-49 | -8.615850e-47 |
| Msa0049760 | Msa0242590 | 0.835141 | 1.994668e-56 | -8.615850e-47 |
| Msa0049760 | Msa0260510 | 0.803777 | 2.964998e-49 | -8.615850e-47 |
| Msa0049760 | Msa0269210 | 0.800259 | 1.567719e-48 | -8.615850e-47 |
| Msa0049760 | Msa0271880 | 0.805239 | 1.469621e-49 | -8.615850e-47 |
| Msa0049760 | Msa0280790 | 0.831843 | 1.326852e-55 | -8.615850e-47 |
| Msa0049760 | Msa0298470 | 0.835139 | 1.996474e-56 | -8.615850e-47 |
| Msa0049760 | Msa0310850 | 0.800962 | 1.126632e-48 | -8.615850e-47 |
| Msa0049760 | Msa0330380 | 0.812877 | 3.398740e-51 | -8.615850e-47 |
| Msa0049760 | Msa0340500 | 0.829368 | 5.353947e-55 | -8.615850e-47 |
| Msa0049760 | Msa0343010 | 0.838646 | 2.541756e-57 | -8.615850e-47 |
| Msa0049760 | Msa0367520 | 0.828927 | 6.848975e-55 | -8.615850e-47 |
| Msa0049760 | Msa0369790 | 0.807320 | 5.353812e-50 | -8.615850e-47 |
| Msa0049760 | Msa0380620 | 0.804606 | 1.992362e-49 | -8.615850e-47 |
| Msa0049760 | Msa0380670 | 0.821204 | 4.571792e-53 | -8.615850e-47 |
| Msa0049760 | Msa0400000 | 0.819519 | 1.113015e-52 | -8.615850e-47 |
| Msa0049760 | Msa0400950 | 0.811730 | 6.050278e-51 | -8.615850e-47 |
| Msa0049760 | Msa0430300 | 0.822582 | 2.193152e-53 | -8.615850e-47 |
| Msa0049760 | Msa0432010 | 0.830498 | 2.839750e-55 | -8.615850e-47 |
| Msa0049760 | Msa0436330 | 0.806234 | 9.081757e-50 | -8.615850e-47 |
| Msa0049760 | Msa0447750 | 0.818977 | 1.478546e-52 | -8.615850e-47 |
| Msa0049760 | Msa0464000 | 0.806901 | 6.568942e-50 | -8.615850e-47 |
| Msa0049760 | Msa0481890 | 0.837339 | 5.509073e-57 | -8.615850e-47 |
| Msa0049760 | Msa0520870 | 0.814817 | 1.269837e-51 | -8.615850e-47 |
| Msa0049760 | Msa0528570 | 0.802554 | 5.310211e-49 | -8.615850e-47 |
| Msa0049760 | Msa0529030 | 0.801356 | 9.358106e-49 | -8.615850e-47 |
| Msa0049760 | Msa0531960 | 0.845470 | 3.980836e-59 | -8.615850e-47 |
| Msa0049760 | Msa0548470 | 0.820972 | 5.169585e-53 | -8.615850e-47 |
| Msa0049760 | Msa0567170 | 0.839764 | 1.303695e-57 | -8.615850e-47 |
| Msa0049760 | Msa0580370 | 0.851777 | 7.114384e-61 | -8.615850e-47 |
| Msa0049760 | Msa0588920 | 0.817015 | 4.104991e-52 | -8.615850e-47 |
| Msa0049760 | Msa0606100 | 0.814708 | 1.342315e-51 | -8.615850e-47 |
| Msa0049760 | Msa0620980 | 0.814853 | 1.246536e-51 | -8.615850e-47 |
| Msa0049760 | Msa0621710 | 0.856538 | 3.005813e-62 | -8.615850e-47 |
| Msa0049760 | Msa0624900 | 0.802383 | 5.757561e-49 | -8.615850e-47 |
| Msa0049760 | Msa0644410 | 0.820090 | 8.243681e-53 | -8.615850e-47 |
| Msa0049760 | Msa0647050 | 0.809063 | 2.277491e-50 | -8.615850e-47 |
| Msa0049760 | Msa0658640 | 0.843032 | 1.797779e-58 | -8.615850e-47 |
| Msa0049760 | Msa0661150 | 0.833501 | 5.144368e-56 | -8.615850e-47 |
| Msa0049760 | Msa0666700 | 0.864474 | 1.185196e-64 | -8.615850e-47 |
| Msa0049760 | Msa0702810 | 0.807960 | 3.916044e-50 | -8.615850e-47 |
| Msa0049760 | Msa0703600 | 0.825473 | 4.600087e-54 | -8.615850e-47 |
| Msa0049760 | Msa0709200 | 0.827509 | 1.504118e-54 | -8.615850e-47 |
| Msa0049760 | Msa0709440 | 0.836738 | 7.846309e-57 | -8.615850e-47 |
| Msa0049760 | Msa0709630 | 0.809546 | 1.794105e-50 | -8.615850e-47 |
| Msa0049760 | Msa0714790 | 0.850711 | 1.423216e-60 | -8.615850e-47 |
| Msa0049760 | Msa0735780 | 0.849819 | 2.531252e-60 | -8.615850e-47 |
| Msa0049760 | Msa0738700 | 0.848358 | 6.448535e-60 | -8.615850e-47 |
| Msa0049760 | Msa0740710 | 0.809268 | 2.058381e-50 | -8.615850e-47 |
| Msa0049760 | Msa0743440 | 0.800698 | 1.275780e-48 | -8.615850e-47 |
| Msa0049760 | Msa0745720 | 0.804458 | 2.139129e-49 | -8.615850e-47 |
| Msa0049760 | Msa0756820 | 0.849671 | 2.783618e-60 | -8.615850e-47 |
| Msa0049760 | Msa0761670 | 0.828978 | 6.656346e-55 | -8.615850e-47 |
| Msa0049760 | Msa0773630 | 0.832739 | 7.959355e-56 | -8.615850e-47 |
| Msa0049760 | Msa0777750 | 0.815975 | 7.016555e-52 | -8.615850e-47 |
| Msa0049760 | Msa0778550 | 0.806483 | 8.048312e-50 | -8.615850e-47 |
| Msa0049760 | Msa0780910 | 0.833590 | 4.886554e-56 | -8.615850e-47 |
| Msa0049760 | Msa0795870 | 0.846305 | 2.360683e-59 | -8.615850e-47 |
| Msa0049760 | Msa0805680 | 0.802508 | 5.426127e-49 | -8.615850e-47 |
| Msa0049760 | Msa0811020 | 0.818241 | 2.172039e-52 | -8.615850e-47 |
| Msa0049760 | Msa0818880 | 0.804008 | 2.654837e-49 | -8.615850e-47 |
| Msa0049760 | Msa0819170 | 0.802897 | 4.511090e-49 | -8.615850e-47 |
| Msa0049760 | Msa0821160 | 0.812451 | 4.211264e-51 | -8.615850e-47 |
| Msa0049760 | Msa0824450 | 0.850185 | 1.999554e-60 | -8.615850e-47 |
| Msa0049760 | Msa0828970 | 0.811488 | 6.827394e-51 | -8.615850e-47 |
| Msa0049760 | Msa0830130 | 0.800290 | 1.544747e-48 | -8.615850e-47 |
| Msa0049760 | Msa0833650 | 0.846495 | 2.095052e-59 | -8.615850e-47 |
| Msa0049760 | Msa0835350 | 0.805694 | 1.179569e-49 | -8.615850e-47 |
| Msa0049760 | Msa0836150 | 0.863699 | 2.065984e-64 | -8.615850e-47 |
| Msa0049760 | Msa0842070 | 0.802972 | 4.353712e-49 | -8.615850e-47 |
| Msa0049760 | Msa0855230 | 0.800999 | 1.107111e-48 | -8.615850e-47 |
| Msa0049760 | Msa0859290 | 0.840793 | 7.018596e-58 | -8.615850e-47 |
| Msa0049760 | Msa0863620 | 0.805094 | 1.575585e-49 | -8.615850e-47 |
| Msa0049760 | Msa0867110 | 0.804632 | 1.967744e-49 | -8.615850e-47 |
| Msa0049760 | Msa0931590 | 0.816371 | 5.723797e-52 | -8.615850e-47 |
| Msa0049760 | Msa0966320 | 0.825466 | 4.616127e-54 | -8.615850e-47 |
| Msa0049760 | Msa0966480 | 0.800598 | 1.336694e-48 | -8.615850e-47 |
| Msa0049760 | Msa0997920 | 0.804722 | 1.884483e-49 | -8.615850e-47 |
| Msa0049760 | Msa1035570 | 0.816500 | 5.357295e-52 | -8.615850e-47 |
| Msa0049760 | Msa1035610 | 0.822138 | 2.781181e-53 | -8.615850e-47 |
| Msa0049760 | Msa1037540 | 0.809655 | 1.699948e-50 | -8.615850e-47 |
| Msa0049760 | Msa1042160 | 0.806745 | 7.087261e-50 | -8.615850e-47 |
| Msa0049760 | Msa1042190 | 0.810340 | 1.210450e-50 | -8.615850e-47 |
| Msa0049760 | Msa1042880 | 0.800417 | 1.455170e-48 | -8.615850e-47 |
| Msa0049760 | Msa1059020 | 0.803590 | 3.242534e-49 | -8.615850e-47 |
| Msa0049760 | Msa1081390 | 0.853112 | 2.963467e-61 | -8.615850e-47 |
| Msa0049760 | Msa1082200 | 0.814895 | 1.220439e-51 | -8.615850e-47 |
| Msa0049760 | Msa1084530 | 0.834052 | 3.746609e-56 | -8.615850e-47 |
| Msa0049760 | Msa1116220 | 0.855738 | 5.155782e-62 | -8.615850e-47 |
| Msa0049760 | Msa1116660 | 0.816685 | 4.869512e-52 | -8.615850e-47 |
| Msa0049760 | Msa1125820 | 0.839289 | 1.732457e-57 | -8.615850e-47 |
| Msa0049760 | Msa1125990 | 0.843187 | 1.634634e-58 | -8.615850e-47 |
| Msa0049760 | Msa1132530 | 0.831651 | 1.479205e-55 | -8.615850e-47 |
| Msa0049760 | Msa1132840 | 0.850340 | 1.808856e-60 | -8.615850e-47 |
| Msa0049760 | Msa1154050 | 0.804561 | 2.036239e-49 | -8.615850e-47 |
| Msa0049760 | Msa1167470 | 0.801362 | 9.334434e-49 | -8.615850e-47 |
| Msa0049760 | Msa1171290 | 0.829262 | 5.678305e-55 | -8.615850e-47 |
| Msa0049760 | Msa1192570 | 0.811182 | 7.957973e-51 | -8.615850e-47 |
| Msa0049760 | Msa1200890 | 0.803832 | 2.888366e-49 | -8.615850e-47 |
| Msa0049760 | Msa1208950 | 0.810304 | 1.231934e-50 | -8.615850e-47 |
| Msa0049760 | Msa1215870 | 0.850011 | 2.236845e-60 | -8.615850e-47 |
| Msa0049760 | Msa1218820 | 0.813461 | 2.530379e-51 | -8.615850e-47 |
| Msa0049760 | Msa1226520 | 0.844378 | 7.847630e-59 | -8.615850e-47 |
| Msa0049760 | Msa1240260 | 0.822472 | 2.325507e-53 | -8.615850e-47 |
| Msa0049760 | Msa1244240 | 0.804705 | 1.900254e-49 | -8.615850e-47 |
| Msa0049760 | Msa1254540 | 0.830813 | 2.376434e-55 | -8.615850e-47 |
| Msa0049760 | Msa1263740 | 0.801832 | 7.473598e-49 | -8.615850e-47 |
| Msa0049760 | Msa1263780 | 0.819698 | 1.012832e-52 | -8.615850e-47 |
| Msa0049760 | Msa1263900 | 0.808238 | 3.416197e-50 | -8.615850e-47 |
| Msa0049760 | Msa1268630 | 0.826651 | 2.412843e-54 | -8.615850e-47 |
| Msa0049760 | Msa1301700 | 0.800500 | 1.400192e-48 | -8.615850e-47 |
| Msa0049760 | Msa1307090 | 0.803460 | 3.450023e-49 | -8.615850e-47 |
| Msa0049760 | Msa1307630 | 0.821993 | 3.004752e-53 | -8.615850e-47 |
| Msa0049760 | Msa1321340 | 0.801935 | 7.119567e-49 | -8.615850e-47 |
| Msa0049760 | Msa1343170 | 0.829841 | 4.106348e-55 | -8.615850e-47 |
| Msa0049760 | Msa1343180 | 0.842784 | 2.092726e-58 | -8.615850e-47 |
| Msa0049760 | Msa1359690 | 0.837681 | 4.502498e-57 | -8.615850e-47 |
| Msa0049760 | Msa1362130 | 0.801073 | 1.069299e-48 | -8.615850e-47 |
| Msa0049760 | Msa1367180 | 0.804654 | 1.947416e-49 | -8.615850e-47 |
| Msa0049760 | Msa1368750 | 0.833483 | 5.196814e-56 | -8.615850e-47 |
| Msa0049760 | Msa1372040 | 0.811122 | 8.199343e-51 | -8.615850e-47 |
| Msa0049760 | Msa1374790 | 0.834235 | 3.370882e-56 | -8.615850e-47 |
| Msa0049760 | Msa1380120 | 0.825874 | 3.693582e-54 | -8.615850e-47 |
| Msa0049760 | Msa1381180 | 0.823226 | 1.552260e-53 | -8.615850e-47 |
| Msa0049760 | Msa1384150 | 0.811053 | 8.486475e-51 | -8.615850e-47 |
| Msa0049760 | Msa1392580 | 0.818538 | 1.860513e-52 | -8.615850e-47 |
| Msa0049760 | Msa1397400 | 0.813615 | 2.340351e-51 | -8.615850e-47 |
| Msa0049760 | Msa1400010 | 0.813187 | 2.906472e-51 | -8.615850e-47 |
| Msa0049760 | Msa1409410 | 0.823730 | 1.183580e-53 | -8.615850e-47 |
| Msa0049760 | Msa1420950 | 0.811916 | 5.511075e-51 | -8.615850e-47 |
| Msa0049760 | Msa1429070 | 0.800042 | 1.734698e-48 | -8.615850e-47 |
| Msa0049760 | Msa1437640 | 0.803923 | 2.764455e-49 | -8.615850e-47 |
| Msa0049760 | Msa1437930 | 0.805814 | 1.113338e-49 | -8.615850e-47 |
| Msa0049760 | Msa1438830 | 0.979141 | 2.536845e-147 | -8.615850e-47 |
| Msa0049760 | Msa1450190 | 0.809632 | 1.719487e-50 | -8.615850e-47 |
| Msa0049760 | Msa1451820 | 0.833325 | 5.691266e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0049760 | MtrunA17_Chr4g0057291 | 98.380 | 679 | 8 | 2 | 1 | 678 | 1 | 677 | 0.0 | 1374 |
| Msa0049760 | MtrunA17_Chr7g0224271 | 37.722 | 395 | 223 | 7 | 281 | 662 | 288 | 672 | 5.70e-81 | 270 |
| Msa0049760 | MtrunA17_Chr2g0306641 | 35.266 | 414 | 237 | 10 | 263 | 665 | 96 | 489 | 5.23e-68 | 231 |
| Msa0049760 | MtrunA17_Chr8g0376381 | 34.872 | 390 | 219 | 12 | 282 | 662 | 158 | 521 | 1.40e-64 | 223 |
| Msa0049760 | MtrunA17_Chr7g0245601 | 36.856 | 369 | 215 | 10 | 297 | 664 | 442 | 793 | 2.82e-63 | 224 |
| Msa0049760 | MtrunA17_Chr1g0183641 | 33.810 | 420 | 247 | 11 | 256 | 663 | 77 | 477 | 1.17e-58 | 205 |
| Msa0049760 | MtrunA17_Chr4g0038761 | 36.170 | 376 | 218 | 12 | 297 | 667 | 88 | 446 | 2.62e-58 | 203 |
| Msa0049760 | MtrunA17_Chr5g0445331 | 33.418 | 395 | 227 | 10 | 286 | 662 | 155 | 531 | 4.08e-58 | 205 |
| Msa0049760 | MtrunA17_Chr4g0057891 | 34.367 | 387 | 233 | 13 | 287 | 662 | 143 | 519 | 7.97e-57 | 201 |
| Msa0049760 | MtrunA17_Chr8g0357601 | 29.259 | 499 | 317 | 12 | 185 | 662 | 68 | 551 | 5.61e-56 | 200 |
| Msa0049760 | MtrunA17_Chr3g0110971 | 31.328 | 399 | 236 | 8 | 282 | 662 | 208 | 586 | 8.13e-56 | 200 |
| Msa0049760 | MtrunA17_Chr3g0125811 | 36.126 | 382 | 217 | 14 | 293 | 662 | 203 | 569 | 1.59e-55 | 199 |
| Msa0049760 | MtrunA17_Chr1g0200401 | 33.088 | 408 | 226 | 14 | 283 | 662 | 70 | 458 | 7.19e-55 | 194 |
| Msa0049760 | MtrunA17_Chr1g0159461 | 35.079 | 382 | 221 | 13 | 293 | 662 | 225 | 591 | 3.52e-54 | 196 |
| Msa0049760 | MtrunA17_Chr4g0038851 | 28.689 | 488 | 266 | 11 | 236 | 662 | 2 | 468 | 4.30e-54 | 192 |
| Msa0049760 | MtrunA17_Chr2g0319091 | 32.282 | 412 | 244 | 13 | 269 | 662 | 184 | 578 | 3.39e-53 | 192 |
| Msa0049760 | MtrunA17_Chr5g0447691 | 33.508 | 382 | 233 | 11 | 290 | 662 | 174 | 543 | 3.40e-53 | 192 |
| Msa0049760 | MtrunA17_Chr3g0101141 | 30.769 | 403 | 249 | 9 | 273 | 662 | 156 | 541 | 6.91e-51 | 185 |
| Msa0049760 | MtrunA17_Chr3g0085681 | 26.777 | 422 | 244 | 7 | 294 | 662 | 26 | 435 | 3.40e-47 | 172 |
| Msa0049760 | MtrunA17_Chr2g0328391 | 29.216 | 421 | 273 | 12 | 258 | 664 | 261 | 670 | 3.73e-46 | 174 |
| Msa0049760 | MtrunA17_Chr4g0076091 | 29.610 | 385 | 249 | 9 | 288 | 662 | 170 | 542 | 3.93e-45 | 169 |
| Msa0049760 | MtrunA17_Chr2g0328341 | 26.302 | 384 | 263 | 8 | 289 | 664 | 268 | 639 | 6.32e-45 | 170 |
| Msa0049760 | MtrunA17_Chr4g0039661 | 31.152 | 382 | 237 | 12 | 290 | 662 | 190 | 554 | 8.81e-44 | 166 |
| Msa0049760 | MtrunA17_Chr2g0328381 | 26.684 | 386 | 259 | 9 | 289 | 664 | 271 | 642 | 8.97e-44 | 167 |
| Msa0049760 | MtrunA17_Chr2g0290241 | 30.337 | 356 | 227 | 9 | 316 | 662 | 81 | 424 | 3.46e-43 | 161 |
| Msa0049760 | MtrunA17_Chr4g0031721 | 27.040 | 429 | 288 | 10 | 250 | 664 | 268 | 685 | 1.35e-41 | 161 |
| Msa0049760 | MtrunA17_Chr2g0328371 | 32.143 | 252 | 163 | 5 | 369 | 614 | 2 | 251 | 2.48e-41 | 151 |
| Msa0049760 | MtrunA17_Chr4g0031701 | 27.404 | 416 | 274 | 11 | 266 | 664 | 223 | 627 | 4.84e-41 | 159 |
| Msa0049760 | MtrunA17_Chr4g0031711 | 27.273 | 407 | 268 | 12 | 274 | 665 | 342 | 735 | 1.45e-40 | 158 |
| Msa0049760 | MtrunA17_Chr5g0396491 | 32.443 | 262 | 166 | 2 | 239 | 500 | 9 | 259 | 1.68e-40 | 154 |
| Msa0049760 | MtrunA17_Chr5g0396491 | 33.333 | 153 | 95 | 5 | 511 | 662 | 331 | 477 | 5.31e-19 | 90.5 |
| Msa0049760 | MtrunA17_Chr5g0424131 | 31.785 | 409 | 239 | 16 | 279 | 663 | 107 | 499 | 2.23e-40 | 155 |
| Msa0049760 | MtrunA17_Chr3g0114841 | 31.127 | 408 | 237 | 16 | 283 | 663 | 110 | 500 | 2.37e-40 | 155 |
| Msa0049760 | MtrunA17_Chr4g0031731 | 27.525 | 396 | 263 | 10 | 282 | 664 | 243 | 627 | 3.71e-40 | 156 |
| Msa0049760 | MtrunA17_Chr2g0294461 | 28.321 | 399 | 265 | 10 | 276 | 662 | 195 | 584 | 5.26e-40 | 155 |
| Msa0049760 | MtrunA17_Chr5g0401131 | 28.608 | 388 | 253 | 11 | 292 | 664 | 113 | 491 | 6.24e-40 | 153 |
| Msa0049760 | MtrunA17_Chr4g0031741 | 26.494 | 385 | 261 | 9 | 289 | 664 | 280 | 651 | 9.03e-40 | 155 |
| Msa0049760 | MtrunA17_Chr2g0328401 | 27.108 | 332 | 221 | 7 | 289 | 610 | 286 | 606 | 2.44e-38 | 150 |
| Msa0049760 | MtrunA17_Chr2g0294471 | 27.820 | 399 | 264 | 12 | 276 | 662 | 189 | 575 | 1.42e-37 | 148 |
| Msa0049760 | MtrunA17_Chr7g0238891 | 24.936 | 389 | 264 | 8 | 289 | 664 | 368 | 741 | 8.32e-37 | 147 |
| Msa0049760 | MtrunA17_Chr3g0085361 | 27.874 | 348 | 191 | 5 | 367 | 662 | 10 | 349 | 1.72e-36 | 140 |
| Msa0049760 | MtrunA17_Chr8g0383981 | 29.383 | 405 | 241 | 16 | 278 | 666 | 124 | 499 | 2.05e-36 | 143 |
| Msa0049760 | MtrunA17_Chr7g0270031 | 26.992 | 389 | 263 | 10 | 282 | 662 | 178 | 553 | 3.79e-36 | 143 |
| Msa0049760 | MtrunA17_Chr2g0328411 | 24.935 | 385 | 262 | 9 | 289 | 662 | 285 | 653 | 3.86e-36 | 145 |
| Msa0049760 | MtrunA17_Chr2g0328431 | 24.524 | 420 | 279 | 11 | 267 | 664 | 252 | 655 | 4.53e-35 | 141 |
| Msa0049760 | MtrunA17_Chr1g0194621 | 24.515 | 412 | 285 | 13 | 264 | 662 | 119 | 517 | 6.68e-34 | 136 |
| Msa0049760 | MtrunA17_Chr2g0329591 | 25.679 | 405 | 242 | 10 | 293 | 664 | 74 | 452 | 4.31e-32 | 130 |
| Msa0049760 | MtrunA17_Chr7g0236851 | 34.221 | 263 | 160 | 10 | 405 | 662 | 402 | 656 | 2.03e-31 | 130 |
| Msa0049760 | MtrunA17_Chr2g0328361 | 23.256 | 387 | 246 | 8 | 289 | 664 | 270 | 616 | 1.73e-29 | 124 |
| Msa0049760 | MtrunA17_Chr5g0401421 | 24.048 | 420 | 264 | 13 | 293 | 664 | 35 | 447 | 1.16e-25 | 110 |
| Msa0049760 | MtrunA17_Chr6g0468561 | 32.222 | 270 | 162 | 10 | 405 | 662 | 401 | 661 | 1.43e-25 | 112 |
| Msa0049760 | MtrunA17_Chr4g0012071 | 25.526 | 380 | 246 | 11 | 294 | 662 | 197 | 550 | 4.11e-25 | 110 |
| Msa0049760 | MtrunA17_Chr7g0230771 | 24.378 | 402 | 280 | 7 | 266 | 662 | 348 | 730 | 2.24e-23 | 105 |
| Msa0049760 | MtrunA17_Chr7g0230731 | 24.814 | 403 | 277 | 9 | 266 | 662 | 345 | 727 | 4.97e-23 | 104 |
| Msa0049760 | MtrunA17_Chr4g0053901 | 22.673 | 419 | 269 | 13 | 293 | 664 | 59 | 469 | 3.74e-19 | 90.9 |
| Msa0049760 | MtrunA17_Chr8g0373561 | 27.577 | 359 | 218 | 14 | 319 | 662 | 209 | 540 | 2.94e-17 | 85.5 |
| Msa0049760 | MtrunA17_Chr8g0344101 | 23.786 | 412 | 237 | 15 | 293 | 662 | 223 | 599 | 5.11e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0049760 | AT1G63100.2 | 55.635 | 701 | 226 | 23 | 1 | 663 | 1 | 654 | 0.0 | 685 |
| Msa0049760 | AT1G63100.1 | 53.638 | 701 | 215 | 21 | 1 | 663 | 1 | 629 | 0.0 | 655 |
| Msa0049760 | AT1G66350.1 | 34.961 | 389 | 218 | 11 | 282 | 662 | 144 | 505 | 6.18e-67 | 229 |
| Msa0049760 | AT2G01570.1 | 35.990 | 389 | 220 | 11 | 282 | 662 | 213 | 580 | 2.30e-65 | 226 |
| Msa0049760 | AT1G50420.1 | 32.360 | 445 | 231 | 10 | 279 | 662 | 43 | 478 | 5.42e-65 | 223 |
| Msa0049760 | AT1G14920.1 | 35.219 | 389 | 223 | 11 | 282 | 662 | 161 | 528 | 1.30e-64 | 223 |
| Msa0049760 | AT3G54220.1 | 34.949 | 392 | 238 | 8 | 273 | 664 | 277 | 651 | 2.08e-64 | 225 |
| Msa0049760 | AT3G03450.1 | 33.162 | 389 | 236 | 11 | 282 | 662 | 172 | 544 | 1.49e-61 | 215 |
| Msa0049760 | AT5G17490.1 | 33.073 | 384 | 233 | 11 | 284 | 662 | 151 | 515 | 8.48e-60 | 210 |
| Msa0049760 | AT5G41920.1 | 35.641 | 390 | 228 | 13 | 278 | 662 | 28 | 399 | 6.16e-59 | 204 |
| Msa0049760 | AT1G55580.1 | 35.036 | 411 | 222 | 12 | 290 | 662 | 41 | 444 | 3.77e-53 | 189 |
| Msa0049760 | AT5G48150.1 | 32.225 | 391 | 229 | 13 | 289 | 662 | 118 | 489 | 1.27e-48 | 178 |
| Msa0049760 | AT5G48150.4 | 32.225 | 391 | 229 | 13 | 289 | 662 | 118 | 489 | 1.27e-48 | 178 |
| Msa0049760 | AT5G48150.2 | 32.225 | 391 | 229 | 13 | 289 | 662 | 118 | 489 | 1.27e-48 | 178 |
| Msa0049760 | AT5G48150.3 | 32.225 | 391 | 229 | 13 | 289 | 662 | 118 | 489 | 1.27e-48 | 178 |
| Msa0049760 | AT5G66770.1 | 32.172 | 373 | 217 | 12 | 302 | 662 | 235 | 583 | 1.88e-48 | 179 |
| Msa0049760 | AT2G04890.1 | 32.540 | 378 | 237 | 12 | 289 | 662 | 49 | 412 | 4.96e-48 | 174 |
| Msa0049760 | AT1G50600.3 | 31.552 | 393 | 242 | 12 | 285 | 662 | 145 | 525 | 8.88e-48 | 176 |
| Msa0049760 | AT1G50600.1 | 31.980 | 394 | 239 | 13 | 285 | 662 | 216 | 596 | 2.93e-47 | 176 |
| Msa0049760 | AT1G50600.2 | 31.980 | 394 | 239 | 13 | 285 | 662 | 220 | 600 | 3.51e-47 | 176 |
| Msa0049760 | AT4G17230.1 | 32.041 | 387 | 240 | 10 | 288 | 664 | 153 | 526 | 2.24e-46 | 172 |
| Msa0049760 | AT4G17230.2 | 32.041 | 387 | 240 | 10 | 288 | 664 | 153 | 526 | 2.24e-46 | 172 |
| Msa0049760 | AT1G21450.1 | 30.900 | 411 | 256 | 11 | 268 | 662 | 194 | 592 | 1.29e-45 | 172 |
| Msa0049760 | AT2G29065.1 | 31.026 | 390 | 241 | 13 | 292 | 664 | 251 | 629 | 1.31e-42 | 164 |
| Msa0049760 | AT3G50650.1 | 32.609 | 368 | 209 | 14 | 313 | 662 | 195 | 541 | 1.63e-42 | 162 |
| Msa0049760 | AT2G29060.2 | 27.619 | 420 | 265 | 12 | 258 | 665 | 265 | 657 | 3.02e-41 | 160 |
| Msa0049760 | AT2G29060.1 | 27.619 | 420 | 265 | 12 | 258 | 665 | 302 | 694 | 3.53e-41 | 160 |
| Msa0049760 | AT1G07530.1 | 27.979 | 386 | 257 | 10 | 289 | 664 | 392 | 766 | 2.27e-40 | 158 |
| Msa0049760 | AT1G07520.2 | 28.288 | 403 | 254 | 16 | 282 | 664 | 143 | 530 | 6.83e-40 | 154 |
| Msa0049760 | AT1G07520.4 | 28.288 | 403 | 254 | 16 | 282 | 664 | 143 | 530 | 6.83e-40 | 154 |
| Msa0049760 | AT5G59450.1 | 25.887 | 479 | 310 | 14 | 220 | 666 | 136 | 601 | 1.72e-39 | 154 |
| Msa0049760 | AT1G07520.1 | 28.288 | 403 | 254 | 16 | 282 | 664 | 307 | 694 | 1.92e-39 | 155 |
| Msa0049760 | AT1G07520.3 | 28.288 | 403 | 254 | 16 | 282 | 664 | 308 | 695 | 2.18e-39 | 155 |
| Msa0049760 | AT4G37650.1 | 27.481 | 393 | 258 | 9 | 292 | 664 | 145 | 530 | 3.74e-39 | 152 |
| Msa0049760 | AT4G08250.1 | 28.856 | 402 | 250 | 14 | 279 | 662 | 93 | 476 | 4.83e-39 | 151 |
| Msa0049760 | AT3G46600.1 | 26.877 | 413 | 269 | 10 | 261 | 664 | 192 | 580 | 1.85e-36 | 145 |
| Msa0049760 | AT3G46600.2 | 28.010 | 382 | 254 | 9 | 292 | 664 | 3 | 372 | 2.37e-36 | 140 |
| Msa0049760 | AT3G46600.3 | 27.119 | 413 | 273 | 10 | 268 | 664 | 148 | 548 | 4.38e-36 | 143 |
| Msa0049760 | AT2G37650.2 | 25.700 | 393 | 254 | 11 | 289 | 664 | 331 | 702 | 2.99e-32 | 133 |
| Msa0049760 | AT2G37650.1 | 25.700 | 393 | 254 | 11 | 289 | 664 | 343 | 714 | 3.71e-32 | 133 |
| Msa0049760 | AT5G52510.1 | 29.283 | 321 | 193 | 10 | 367 | 662 | 328 | 639 | 3.20e-27 | 117 |
| Msa0049760 | AT3G49950.1 | 26.700 | 397 | 251 | 12 | 293 | 665 | 30 | 410 | 4.55e-26 | 111 |
| Msa0049760 | AT4G00150.1 | 28.212 | 358 | 220 | 14 | 312 | 662 | 226 | 553 | 3.72e-25 | 110 |
| Msa0049760 | AT3G60630.1 | 27.036 | 307 | 199 | 10 | 369 | 662 | 327 | 621 | 1.09e-23 | 106 |
| Msa0049760 | AT2G45160.1 | 27.302 | 315 | 185 | 11 | 369 | 662 | 347 | 638 | 2.03e-21 | 99.4 |
| Msa0049760 | AT4G36710.1 | 23.650 | 389 | 261 | 12 | 287 | 662 | 119 | 484 | 1.97e-18 | 89.4 |
| Msa0049760 | AT3G13840.1 | 24.939 | 413 | 250 | 18 | 275 | 662 | 132 | 509 | 5.06e-17 | 85.1 |
Find 170 sgRNAs with CRISPR-Local
Find 408 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCATTTCATTGCAAAAT+TGG | 0.138280 | 1_2:+3262375 | Msa0049760:CDS |
| CCTTTCTCTTTGAATTGTTC+TGG | 0.202054 | 1_2:+3261977 | Msa0049760:CDS |
| ACTGGTTGTGTTGATGCTAT+TGG | 0.221753 | 1_2:+3262331 | Msa0049760:CDS |
| GTAACAAAGATCACCAATTT+TGG | 0.231391 | 1_2:+3262085 | Msa0049760:CDS |
| AGATCAAGGATGAGGAGTTT+TGG | 0.247813 | 1_2:+3261744 | Msa0049760:CDS |
| AGTTTCAGTTTGGCACAATT+TGG | 0.253074 | 1_2:+3261893 | Msa0049760:CDS |
| TTGGAGAGGCACCAGAGTTT+TGG | 0.253860 | 1_2:+3263216 | Msa0049760:CDS |
| CTGCTGTTGTTCTTGACTTC+AGG | 0.262186 | 1_2:-3261653 | None:intergenic |
| CTCTCTACACAGTATCTTCT+TGG | 0.270369 | 1_2:+3263412 | Msa0049760:CDS |
| TGTCACCAACTCACAGATTA+AGG | 0.272810 | 1_2:+3261480 | Msa0049760:CDS |
| AACCATTTCATTGCAAAATT+GGG | 0.272931 | 1_2:+3262376 | Msa0049760:CDS |
| CTGGTTGTGTTGATGCTATT+GGG | 0.293519 | 1_2:+3262332 | Msa0049760:CDS |
| AAATAGAGCTAAGAGGAAAA+AGG | 0.307901 | 1_2:+3261829 | Msa0049760:CDS |
| ATAAGCACAAATTCGGCTTA+TGG | 0.317498 | 1_2:-3262425 | None:intergenic |
| GCTTGCAGAACATGGATCTT+TGG | 0.333074 | 1_2:+3261793 | Msa0049760:CDS |
| CAATCCTACAATTGTTGTTA+TGG | 0.340164 | 1_2:+3263002 | Msa0049760:CDS |
| TGGACACCGGTTGACGTTGC+TGG | 0.348429 | 1_2:+3263432 | Msa0049760:CDS |
| CATGAAGAGGGTAATGGTTC+GGG | 0.351755 | 1_2:+3262217 | Msa0049760:CDS |
| TGCCTTTGTCTAACAATCCT+TGG | 0.358700 | 1_2:+3262050 | Msa0049760:CDS |
| AATACATCTTCAACAGAAAC+TGG | 0.362646 | 1_2:-3263314 | None:intergenic |
| TCAGTTCCTTCATGCTGATA+AGG | 0.365523 | 1_2:-3262244 | None:intergenic |
| CGATGTGAAATGAAGAAACT+TGG | 0.373450 | 1_2:-3262593 | None:intergenic |
| TCTGCCATAACAACAATTGT+AGG | 0.376086 | 1_2:-3263006 | None:intergenic |
| GTGGCTACCCTCACCAAAAT+TGG | 0.379531 | 1_2:-3262098 | None:intergenic |
| AATTTGGAGCTGGAAACTTT+TGG | 0.382164 | 1_2:+3261909 | Msa0049760:CDS |
| TGAAAGGGAAAGTTTCAGTT+TGG | 0.386013 | 1_2:+3261883 | Msa0049760:CDS |
| AATCTCTGTGTGCTCATTGA+TGG | 0.390998 | 1_2:-3261545 | None:intergenic |
| CGGTAAAATAAGCACAAATT+CGG | 0.394214 | 1_2:-3262432 | None:intergenic |
| GGAGCAACAGCACTTACTTT+GGG | 0.396486 | 1_2:+3263375 | Msa0049760:CDS |
| GATGCATGGGAGTCACTGAT+AGG | 0.410356 | 1_2:+3263277 | Msa0049760:CDS |
| ATCAATGAGCACACAGAGAT+TGG | 0.410565 | 1_2:+3261547 | Msa0049760:CDS |
| GACTTGAAGATGTAAGGCTT+TGG | 0.411643 | 1_2:+3262860 | Msa0049760:CDS |
| TGTTCCAAAGTTTAGCTTCA+AGG | 0.419556 | 1_2:+3262704 | Msa0049760:CDS |
| CCATCAGAGTCACTAGGCTT+TGG | 0.420891 | 1_2:+3262464 | Msa0049760:CDS |
| AGCAACAACTGCTCAGACAT+TGG | 0.422074 | 1_2:+3261718 | Msa0049760:CDS |
| TCTTCAAGTCTGTCGACTAC+TGG | 0.429762 | 1_2:-3262847 | None:intergenic |
| TCGAACATGGCTTGGAGGAT+TGG | 0.430304 | 1_2:-3262728 | None:intergenic |
| ACATGAAGAGGGTAATGGTT+CGG | 0.431411 | 1_2:+3262216 | Msa0049760:CDS |
| TTCGCAGCAGCCGTTGAGGC+CGG | 0.436828 | 1_2:+3261610 | Msa0049760:CDS |
| AGGAGCAACAGCACTTACTT+TGG | 0.437760 | 1_2:+3263374 | Msa0049760:CDS |
| AGAGTCAGAGTTTGAGCCTA+AGG | 0.440522 | 1_2:+3262173 | Msa0049760:CDS |
| GACTCTGATGGCTAAGGCTT+CGG | 0.442125 | 1_2:-3262452 | None:intergenic |
| AAATGAAGAAACTTGGGAAT+TGG | 0.443639 | 1_2:-3262586 | None:intergenic |
| GCAACAACTGCTCAGACATT+GGG | 0.444891 | 1_2:+3261719 | Msa0049760:CDS |
| AGATGTTAGCTAGGGAGATA+AGG | 0.446179 | 1_2:+3263163 | Msa0049760:CDS |
| AAGCAAGAGCTGAATGAAAC+CGG | 0.462075 | 1_2:+3262772 | Msa0049760:CDS |
| TGGCCCTTGAAGCTAAACTT+TGG | 0.467104 | 1_2:-3262708 | None:intergenic |
| CCAGAACAATTCAAAGAGAA+AGG | 0.469406 | 1_2:-3261977 | None:intergenic |
| GAGCTTCCAGCAACGTCAAC+CGG | 0.470552 | 1_2:-3263438 | None:intergenic |
| GTTCTCTGCAGCAGAACATT+CGG | 0.471882 | 1_2:+3261684 | Msa0049760:CDS |
| TTGTTCTGGAGATGAGGAAA+GGG | 0.476638 | 1_2:+3261991 | Msa0049760:CDS |
| GAAACCGGAGACAGACTTGC+TGG | 0.481646 | 1_2:+3262787 | Msa0049760:CDS |
| CATAACAACAATTGTAGGAT+TGG | 0.483005 | 1_2:-3263001 | None:intergenic |
| AGATAGAGGAGATGTTAGCT+AGG | 0.487005 | 1_2:+3263154 | Msa0049760:CDS |
| CCAAGCCATGTTCGAATCAC+GGG | 0.489720 | 1_2:+3262736 | Msa0049760:CDS |
| TGATCACAGTGGCCTTCCAC+TGG | 0.491665 | 1_2:+3263113 | Msa0049760:CDS |
| TCAGACATTGGGAGAGATCA+AGG | 0.493655 | 1_2:+3261730 | Msa0049760:CDS |
| CCATGTTCGAATCACGGGTG+TGG | 0.493749 | 1_2:+3262741 | Msa0049760:CDS |
| TCCGATGAGGATCAAGATAG+AGG | 0.495969 | 1_2:+3263140 | Msa0049760:CDS |
| TGCATTGAGGCTTCTAAACC+AGG | 0.497162 | 1_2:+3262558 | Msa0049760:CDS |
| CACAGTATCTTCTTGGACAC+CGG | 0.497435 | 1_2:+3263419 | Msa0049760:CDS |
| CATGTTCGAATCACGGGTGT+GGG | 0.498098 | 1_2:+3262742 | Msa0049760:CDS |
| TCGACAGACTTGAAGATGTA+AGG | 0.499051 | 1_2:+3262854 | Msa0049760:CDS |
| ATGCATTCTCATTCAACCTT+AGG | 0.503609 | 1_2:-3262189 | None:intergenic |
| CGGCTTATGGAAGTTCCCCT+TGG | 0.503709 | 1_2:-3262412 | None:intergenic |
| GTTCCAAAGTTTAGCTTCAA+GGG | 0.504136 | 1_2:+3262705 | Msa0049760:CDS |
| GAAGGAACTGAAGTGGAGAC+AGG | 0.505317 | 1_2:+3262256 | Msa0049760:CDS |
| ATCGAATGAGATGCTGTTGA+GGG | 0.506115 | 1_2:+3262612 | Msa0049760:CDS |
| CCCGTGATTCGAACATGGCT+TGG | 0.506282 | 1_2:-3262736 | None:intergenic |
| TTGAAGAGGCTTGCAGAACA+TGG | 0.509151 | 1_2:+3261785 | Msa0049760:CDS |
| ACCATTTCATTGCAAAATTG+GGG | 0.509402 | 1_2:+3262377 | Msa0049760:CDS |
| TTCTCCAATTCCCAAAACTC+TGG | 0.510256 | 1_2:-3263227 | None:intergenic |
| CAACAGCACTTACTTTGGGT+TGG | 0.512066 | 1_2:+3263379 | Msa0049760:CDS |
| TCCTCTATCTTGATCCTCAT+CGG | 0.513315 | 1_2:-3263141 | None:intergenic |
| CATCGAATGAGATGCTGTTG+AGG | 0.514579 | 1_2:+3262611 | Msa0049760:CDS |
| AGTTTGGCACAATTTGGAGC+TGG | 0.514639 | 1_2:+3261899 | Msa0049760:CDS |
| GTCTGAGCAGTTGTTGCTAA+AGG | 0.515399 | 1_2:-3261713 | None:intergenic |
| GGTGCAGAAATCACTTCAGC+AGG | 0.516593 | 1_2:-3262025 | None:intergenic |
| GCAGCAGCCGTTGAGGCCGG+TGG | 0.517483 | 1_2:+3261613 | Msa0049760:CDS |
| GCATGGAGGGTTCAGATGCA+TGG | 0.518052 | 1_2:+3263263 | Msa0049760:CDS |
| CATGATGATGTTGATGTTGG+TGG | 0.518083 | 1_2:-3262117 | None:intergenic |
| ACTTGGGAATTGGTGTAACC+TGG | 0.522388 | 1_2:-3262576 | None:intergenic |
| AGGAGAAGAGGACGAAGAAG+AGG | 0.523774 | 1_2:+3262276 | Msa0049760:CDS |
| TTTGAATTGTTCTGGAGATG+AGG | 0.524360 | 1_2:+3261985 | Msa0049760:CDS |
| CAGTGTTCACAAGCAGGAGC+AGG | 0.525223 | 1_2:+3263350 | Msa0049760:CDS |
| CAACATCATCATGTCAATGA+AGG | 0.526407 | 1_2:+3262127 | Msa0049760:CDS |
| ATTTACCTTGTAGCTTCCCT+CGG | 0.526979 | 1_2:+3261570 | Msa0049760:CDS |
| AGGGTGGGAGGAGTTTGAAG+AGG | 0.527118 | 1_2:+3261771 | Msa0049760:CDS |
| GACTACTGGATGAAAATCAA+AGG | 0.528709 | 1_2:-3262833 | None:intergenic |
| CAGCAGCCGTTGAGGCCGGT+GGG | 0.533021 | 1_2:+3261614 | Msa0049760:CDS |
| GTTACAGCAGATTCAAGCCA+AGG | 0.534387 | 1_2:-3262067 | None:intergenic |
| CTGACTCTCTGATGAACCAT+TGG | 0.536463 | 1_2:-3262158 | None:intergenic |
| TCCAAGCCATGTTCGAATCA+CGG | 0.544215 | 1_2:+3262735 | Msa0049760:CDS |
| ACATCGTTGCTTGCGAAGGA+AGG | 0.546146 | 1_2:+3263187 | Msa0049760:CDS |
| GTGATTCGAACATGGCTTGG+AGG | 0.550236 | 1_2:-3262733 | None:intergenic |
| TAATTACAGTGTTCACAAGC+AGG | 0.552347 | 1_2:+3263344 | Msa0049760:CDS |
| TCACTCCTTAATCTGTGAGT+TGG | 0.553015 | 1_2:-3261485 | None:intergenic |
| AAAACCAGCAAGTCTGTCTC+CGG | 0.554388 | 1_2:-3262791 | None:intergenic |
| TTGCTTGCGAAGGAAGGGAC+AGG | 0.554464 | 1_2:+3263193 | Msa0049760:CDS |
| ATTGTTCTGGAGATGAGGAA+AGG | 0.554859 | 1_2:+3261990 | Msa0049760:CDS |
| CATGGAGGGTTCAGATGCAT+GGG | 0.555361 | 1_2:+3263264 | Msa0049760:CDS |
| AGAAAGATGATAGTGGAGCA+TGG | 0.555422 | 1_2:+3263246 | Msa0049760:CDS |
| GGAACACAATGAGGCGAGGT+TGG | 0.556078 | 1_2:+3263038 | Msa0049760:CDS |
| GCTTTGGATGCTTCATGTGA+AGG | 0.557282 | 1_2:+3262876 | Msa0049760:CDS |
| GATAGAGGAGATGTTAGCTA+GGG | 0.557387 | 1_2:+3263155 | Msa0049760:CDS |
| AAAGGGAAGGTTCAATGCCT+CGG | 0.557666 | 1_2:-3262815 | None:intergenic |
| ATTGGGAGAGATCAAGGATG+AGG | 0.561558 | 1_2:+3261736 | Msa0049760:CDS |
| TCAGAACATGAAGAGGGTAA+TGG | 0.563710 | 1_2:+3262211 | Msa0049760:CDS |
| TCATCGGACTCTCCAGTGGA+AGG | 0.563830 | 1_2:-3263125 | None:intergenic |
| GCTAAACTTTGGAACAAGCT+AGG | 0.565024 | 1_2:-3262697 | None:intergenic |
| AAACCATAGACGATGTTGGC+TGG | 0.565074 | 1_2:+3261437 | None:intergenic |
| CCTTAGCCATCAGAGTCACT+AGG | 0.567717 | 1_2:+3262458 | Msa0049760:CDS |
| GAATTGGAGAAAGATGATAG+TGG | 0.568946 | 1_2:+3263239 | Msa0049760:CDS |
| TGACATGATGATGTTGATGT+TGG | 0.569622 | 1_2:-3262120 | None:intergenic |
| ACTACTGGATGAAAATCAAA+GGG | 0.570042 | 1_2:-3262832 | None:intergenic |
| GAAATCCCCACCGGCCTCAA+CGG | 0.572004 | 1_2:-3261620 | None:intergenic |
| CCACACCCGTGATTCGAACA+TGG | 0.572154 | 1_2:-3262741 | None:intergenic |
| TGAAGTGGAGACAGGAGAAG+AGG | 0.572761 | 1_2:+3262264 | Msa0049760:CDS |
| CGCGAAGAACCGTCTTTCCG+AGG | 0.572785 | 1_2:-3261587 | None:intergenic |
| TGTAGCTTCCCTCGGAAAGA+CGG | 0.573619 | 1_2:+3261578 | Msa0049760:CDS |
| CCTAGTGACTCTGATGGCTA+AGG | 0.575424 | 1_2:-3262458 | None:intergenic |
| AGATGATAGTGGAGCATGGA+GGG | 0.575789 | 1_2:+3263250 | Msa0049760:CDS |
| GGCAATGAATGAATTCAAGC+TGG | 0.576427 | 1_2:-3263477 | None:intergenic |
| TCTTTCCGAGGGAAGCTACA+AGG | 0.578020 | 1_2:-3261575 | None:intergenic |
| AAGACACTTCATGATGGTAG+TGG | 0.578818 | 1_2:+3262940 | Msa0049760:CDS |
| GATGTGAAATGAAGAAACTT+GGG | 0.580703 | 1_2:-3262592 | None:intergenic |
| TCAGCATGAAGGAACTGAAG+TGG | 0.582854 | 1_2:+3262249 | Msa0049760:CDS |
| TAGGATTGGTGCTACGAATG+AGG | 0.584060 | 1_2:-3262987 | None:intergenic |
| AGCAGCCGTTGAGGCCGGTG+GGG | 0.586757 | 1_2:+3261615 | Msa0049760:CDS |
| ATCCTCATCGGACTCTCCAG+TGG | 0.587086 | 1_2:-3263129 | None:intergenic |
| ATGCATGGGAGTCACTGATA+GGG | 0.590517 | 1_2:+3263278 | Msa0049760:CDS |
| AGCCAAGGATTGTTAGACAA+AGG | 0.592331 | 1_2:-3262052 | None:intergenic |
| AGGAACATCGTTGCTTGCGA+AGG | 0.592848 | 1_2:+3263183 | Msa0049760:CDS |
| CATCGTTGCTTGCGAAGGAA+GGG | 0.593672 | 1_2:+3263188 | Msa0049760:CDS |
| CCATTTCATTGCAAAATTGG+GGG | 0.595375 | 1_2:+3262378 | Msa0049760:CDS |
| TGTTCGAATCACGGGTGTGG+GGG | 0.596570 | 1_2:+3262744 | Msa0049760:CDS |
| ATGTTCGAATCACGGGTGTG+GGG | 0.598829 | 1_2:+3262743 | Msa0049760:CDS |
| CCAAAGCCTAGTGACTCTGA+TGG | 0.602086 | 1_2:-3262464 | None:intergenic |
| TTCTCCACTGAAATCCCCAC+CGG | 0.608682 | 1_2:-3261629 | None:intergenic |
| GCAAGAAGCGGAACACAATG+AGG | 0.609256 | 1_2:+3263029 | Msa0049760:CDS |
| CTGGATGAAAATCAAAGGGA+AGG | 0.609858 | 1_2:-3262828 | None:intergenic |
| CGCGTTCGCAGCAGCCGTTG+AGG | 0.611606 | 1_2:+3261606 | Msa0049760:CDS |
| GTGTTGATGCTATTGGGTCA+AGG | 0.614329 | 1_2:+3262338 | Msa0049760:CDS |
| GGGAATCCTTATCAGCATGA+AGG | 0.614596 | 1_2:+3262238 | Msa0049760:CDS |
| TTGCGAAGGAAGGGACAGGT+TGG | 0.618359 | 1_2:+3263197 | Msa0049760:CDS |
| GAATGCATCAGAACATGAAG+AGG | 0.618408 | 1_2:+3262204 | Msa0049760:CDS |
| AATGAAGGTTCAGTCTCCAA+TGG | 0.621452 | 1_2:+3262142 | Msa0049760:CDS |
| ACACTTCATGATGGTAGTGG+AGG | 0.624635 | 1_2:+3262943 | Msa0049760:CDS |
| TGCTATTGGGTCAAGGAATG+TGG | 0.631345 | 1_2:+3262345 | Msa0049760:CDS |
| CAAGAAGATACTGTGTAGAG+AGG | 0.631657 | 1_2:-3263411 | None:intergenic |
| ATGAAACTGTCACTGCATTG+AGG | 0.631836 | 1_2:+3262545 | Msa0049760:CDS |
| GCGAAGAACCGTCTTTCCGA+GGG | 0.631984 | 1_2:-3261586 | None:intergenic |
| GAGGCCGGTGGGGATTTCAG+TGG | 0.634819 | 1_2:+3261625 | Msa0049760:CDS |
| AAGGAAGGGACAGGTTGGAG+AGG | 0.635039 | 1_2:+3263202 | Msa0049760:CDS |
| ATCGACTTCGACATAAAGCA+AGG | 0.635920 | 1_2:+3262664 | Msa0049760:CDS |
| AAGATGATAGTGGAGCATGG+AGG | 0.636506 | 1_2:+3263249 | Msa0049760:CDS |
| GTTCACAAGCAGGAGCAGGA+AGG | 0.645596 | 1_2:+3263354 | Msa0049760:CDS |
| AATGCATCAGAACATGAAGA+GGG | 0.650132 | 1_2:+3262205 | Msa0049760:CDS |
| CTTCACAAGACACTTCATGA+TGG | 0.664343 | 1_2:+3262934 | Msa0049760:CDS |
| TGAGCAGTTGTTGCTAAAGG+CGG | 0.665701 | 1_2:-3261710 | None:intergenic |
| GGATTGTTAGACAAAGGCAA+AGG | 0.667360 | 1_2:-3262046 | None:intergenic |
| ATGAAGAGGGTAATGGTTCG+GGG | 0.669794 | 1_2:+3262218 | Msa0049760:CDS |
| TGTTATGGCAGAGCAAGAAG+CGG | 0.671377 | 1_2:+3263017 | Msa0049760:CDS |
| ACATAAAGCAAGGACTACAA+TGG | 0.673543 | 1_2:+3262674 | Msa0049760:CDS |
| GGGGATCTTGCATCTCCAAG+GGG | 0.674372 | 1_2:+3262397 | Msa0049760:CDS |
| AAGCGGAACACAATGAGGCG+AGG | 0.682806 | 1_2:+3263034 | Msa0049760:CDS |
| TTCCACTGGAGAGTCCGATG+AGG | 0.697132 | 1_2:+3263127 | Msa0049760:CDS |
| TTTGATTCGATTGATCACAG+TGG | 0.727954 | 1_2:+3263102 | Msa0049760:CDS |
| GACGAAGAAGAGGAGCATCG+CGG | 0.735685 | 1_2:+3262286 | Msa0049760:CDS |
| TGTGAAGGAACATGAAACTG+TGG | 0.739109 | 1_2:+3262891 | Msa0049760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGAATTTTGATGAATTTGAA+AGG | + | chr1_2:3261867-3261886 | Msa0049760:CDS | 20.0% |
| !!! | GAATTTTGATGAATTTGAAA+GGG | + | chr1_2:3261868-3261887 | Msa0049760:CDS | 20.0% |
| !!! | AGAATTTTGATGAATTTGAA+AGG | + | chr1_2:3261867-3261886 | Msa0049760:CDS | 20.0% |
| !!! | GAATTTTGATGAATTTGAAA+GGG | + | chr1_2:3261868-3261887 | Msa0049760:CDS | 20.0% |
| ! | AACCATTTCATTGCAAAATT+GGG | + | chr1_2:3262376-3262395 | Msa0049760:CDS | 25.0% |
| ! | AACCATTTCATTGCAAAATT+GGG | + | chr1_2:3262376-3262395 | Msa0049760:CDS | 25.0% |
| AAATAGAGCTAAGAGGAAAA+AGG | + | chr1_2:3261829-3261848 | Msa0049760:CDS | 30.0% | |
| AATAGAGCTAAGAGGAAAAA+GGG | + | chr1_2:3261830-3261849 | Msa0049760:CDS | 30.0% | |
| ! | GTAACAAAGATCACCAATTT+TGG | + | chr1_2:3262085-3262104 | Msa0049760:CDS | 30.0% |
| CAACCATTTCATTGCAAAAT+TGG | + | chr1_2:3262375-3262394 | Msa0049760:CDS | 30.0% | |
| ACCATTTCATTGCAAAATTG+GGG | + | chr1_2:3262377-3262396 | Msa0049760:CDS | 30.0% | |
| CGGTAAAATAAGCACAAATT+CGG | - | chr1_2:3262435-3262454 | None:intergenic | 30.0% | |
| AAATGAAGAAACTTGGGAAT+TGG | - | chr1_2:3262589-3262608 | None:intergenic | 30.0% | |
| GATGTGAAATGAAGAAACTT+GGG | - | chr1_2:3262595-3262614 | None:intergenic | 30.0% | |
| ACTACTGGATGAAAATCAAA+GGG | - | chr1_2:3262835-3262854 | None:intergenic | 30.0% | |
| CATAACAACAATTGTAGGAT+TGG | - | chr1_2:3263004-3263023 | None:intergenic | 30.0% | |
| ! | CAATCCTACAATTGTTGTTA+TGG | + | chr1_2:3263002-3263021 | Msa0049760:CDS | 30.0% |
| AATACATCTTCAACAGAAAC+TGG | - | chr1_2:3263317-3263336 | None:intergenic | 30.0% | |
| AAATAGAGCTAAGAGGAAAA+AGG | + | chr1_2:3261829-3261848 | Msa0049760:CDS | 30.0% | |
| AATAGAGCTAAGAGGAAAAA+GGG | + | chr1_2:3261830-3261849 | Msa0049760:CDS | 30.0% | |
| ! | GTAACAAAGATCACCAATTT+TGG | + | chr1_2:3262085-3262104 | Msa0049760:CDS | 30.0% |
| CAACCATTTCATTGCAAAAT+TGG | + | chr1_2:3262375-3262394 | Msa0049760:CDS | 30.0% | |
| ACCATTTCATTGCAAAATTG+GGG | + | chr1_2:3262377-3262396 | Msa0049760:CDS | 30.0% | |
| CGGTAAAATAAGCACAAATT+CGG | - | chr1_2:3262435-3262454 | None:intergenic | 30.0% | |
| AAATGAAGAAACTTGGGAAT+TGG | - | chr1_2:3262589-3262608 | None:intergenic | 30.0% | |
| GATGTGAAATGAAGAAACTT+GGG | - | chr1_2:3262595-3262614 | None:intergenic | 30.0% | |
| ACTACTGGATGAAAATCAAA+GGG | - | chr1_2:3262835-3262854 | None:intergenic | 30.0% | |
| CATAACAACAATTGTAGGAT+TGG | - | chr1_2:3263004-3263023 | None:intergenic | 30.0% | |
| ! | CAATCCTACAATTGTTGTTA+TGG | + | chr1_2:3263002-3263021 | Msa0049760:CDS | 30.0% |
| AATACATCTTCAACAGAAAC+TGG | - | chr1_2:3263317-3263336 | None:intergenic | 30.0% | |
| ! | CTTTTGCAAATAGAGCTAAG+AGG | + | chr1_2:3261822-3261841 | Msa0049760:CDS | 35.0% |
| TGAAAGGGAAAGTTTCAGTT+TGG | + | chr1_2:3261883-3261902 | Msa0049760:CDS | 35.0% | |
| AGTTTCAGTTTGGCACAATT+TGG | + | chr1_2:3261893-3261912 | Msa0049760:CDS | 35.0% | |
| !! | AATTTGGAGCTGGAAACTTT+TGG | + | chr1_2:3261909-3261928 | Msa0049760:CDS | 35.0% |
| ! | TTTTGGTCTGTTCACAGTTT+TGG | + | chr1_2:3261926-3261945 | Msa0049760:CDS | 35.0% |
| CCAGAACAATTCAAAGAGAA+AGG | - | chr1_2:3261980-3261999 | None:intergenic | 35.0% | |
| CCTTTCTCTTTGAATTGTTC+TGG | + | chr1_2:3261977-3261996 | Msa0049760:CDS | 35.0% | |
| !! | TTTGAATTGTTCTGGAGATG+AGG | + | chr1_2:3261985-3262004 | Msa0049760:CDS | 35.0% |
| !! | AAAGATCACCAATTTTGGTG+AGG | + | chr1_2:3262090-3262109 | Msa0049760:CDS | 35.0% |
| !! | AAGATCACCAATTTTGGTGA+GGG | + | chr1_2:3262091-3262110 | Msa0049760:CDS | 35.0% |
| ! | TGACATGATGATGTTGATGT+TGG | - | chr1_2:3262123-3262142 | None:intergenic | 35.0% |
| CAACATCATCATGTCAATGA+AGG | + | chr1_2:3262127-3262146 | Msa0049760:CDS | 35.0% | |
| ATGCATTCTCATTCAACCTT+AGG | - | chr1_2:3262192-3262211 | None:intergenic | 35.0% | |
| AATGCATCAGAACATGAAGA+GGG | + | chr1_2:3262205-3262224 | Msa0049760:CDS | 35.0% | |
| CCATTTCATTGCAAAATTGG+GGG | + | chr1_2:3262378-3262397 | Msa0049760:CDS | 35.0% | |
| ATAAGCACAAATTCGGCTTA+TGG | - | chr1_2:3262428-3262447 | None:intergenic | 35.0% | |
| !! | TACTTCTCGTGATTTTGACA+GGG | + | chr1_2:3262510-3262529 | Msa0049760:CDS | 35.0% |
| CGATGTGAAATGAAGAAACT+TGG | - | chr1_2:3262596-3262615 | None:intergenic | 35.0% | |
| ACATAAAGCAAGGACTACAA+TGG | + | chr1_2:3262674-3262693 | Msa0049760:CDS | 35.0% | |
| ! | TGTTCCAAAGTTTAGCTTCA+AGG | + | chr1_2:3262704-3262723 | Msa0049760:CDS | 35.0% |
| ! | GTTCCAAAGTTTAGCTTCAA+GGG | + | chr1_2:3262705-3262724 | Msa0049760:CDS | 35.0% |
| GACTACTGGATGAAAATCAA+AGG | - | chr1_2:3262836-3262855 | None:intergenic | 35.0% | |
| TCTGCCATAACAACAATTGT+AGG | - | chr1_2:3263009-3263028 | None:intergenic | 35.0% | |
| ! | TTTGATTCGATTGATCACAG+TGG | + | chr1_2:3263102-3263121 | Msa0049760:CDS | 35.0% |
| GAATTGGAGAAAGATGATAG+TGG | + | chr1_2:3263239-3263258 | Msa0049760:CDS | 35.0% | |
| TAATTACAGTGTTCACAAGC+AGG | + | chr1_2:3263344-3263363 | Msa0049760:CDS | 35.0% | |
| ! | CTTTTGCAAATAGAGCTAAG+AGG | + | chr1_2:3261822-3261841 | Msa0049760:CDS | 35.0% |
| TGAAAGGGAAAGTTTCAGTT+TGG | + | chr1_2:3261883-3261902 | Msa0049760:CDS | 35.0% | |
| AGTTTCAGTTTGGCACAATT+TGG | + | chr1_2:3261893-3261912 | Msa0049760:CDS | 35.0% | |
| !! | AATTTGGAGCTGGAAACTTT+TGG | + | chr1_2:3261909-3261928 | Msa0049760:CDS | 35.0% |
| ! | TTTTGGTCTGTTCACAGTTT+TGG | + | chr1_2:3261926-3261945 | Msa0049760:CDS | 35.0% |
| CCAGAACAATTCAAAGAGAA+AGG | - | chr1_2:3261980-3261999 | None:intergenic | 35.0% | |
| CCTTTCTCTTTGAATTGTTC+TGG | + | chr1_2:3261977-3261996 | Msa0049760:CDS | 35.0% | |
| !! | TTTGAATTGTTCTGGAGATG+AGG | + | chr1_2:3261985-3262004 | Msa0049760:CDS | 35.0% |
| !! | AAAGATCACCAATTTTGGTG+AGG | + | chr1_2:3262090-3262109 | Msa0049760:CDS | 35.0% |
| !! | AAGATCACCAATTTTGGTGA+GGG | + | chr1_2:3262091-3262110 | Msa0049760:CDS | 35.0% |
| ! | TGACATGATGATGTTGATGT+TGG | - | chr1_2:3262123-3262142 | None:intergenic | 35.0% |
| CAACATCATCATGTCAATGA+AGG | + | chr1_2:3262127-3262146 | Msa0049760:CDS | 35.0% | |
| ATGCATTCTCATTCAACCTT+AGG | - | chr1_2:3262192-3262211 | None:intergenic | 35.0% | |
| AATGCATCAGAACATGAAGA+GGG | + | chr1_2:3262205-3262224 | Msa0049760:CDS | 35.0% | |
| CCATTTCATTGCAAAATTGG+GGG | + | chr1_2:3262378-3262397 | Msa0049760:CDS | 35.0% | |
| ATAAGCACAAATTCGGCTTA+TGG | - | chr1_2:3262428-3262447 | None:intergenic | 35.0% | |
| !! | TACTTCTCGTGATTTTGACA+GGG | + | chr1_2:3262510-3262529 | Msa0049760:CDS | 35.0% |
| CGATGTGAAATGAAGAAACT+TGG | - | chr1_2:3262596-3262615 | None:intergenic | 35.0% | |
| ACATAAAGCAAGGACTACAA+TGG | + | chr1_2:3262674-3262693 | Msa0049760:CDS | 35.0% | |
| ! | TGTTCCAAAGTTTAGCTTCA+AGG | + | chr1_2:3262704-3262723 | Msa0049760:CDS | 35.0% |
| ! | GTTCCAAAGTTTAGCTTCAA+GGG | + | chr1_2:3262705-3262724 | Msa0049760:CDS | 35.0% |
| GACTACTGGATGAAAATCAA+AGG | - | chr1_2:3262836-3262855 | None:intergenic | 35.0% | |
| TCTGCCATAACAACAATTGT+AGG | - | chr1_2:3263009-3263028 | None:intergenic | 35.0% | |
| ! | TTTGATTCGATTGATCACAG+TGG | + | chr1_2:3263102-3263121 | Msa0049760:CDS | 35.0% |
| GAATTGGAGAAAGATGATAG+TGG | + | chr1_2:3263239-3263258 | Msa0049760:CDS | 35.0% | |
| TAATTACAGTGTTCACAAGC+AGG | + | chr1_2:3263344-3263363 | Msa0049760:CDS | 35.0% | |
| TGTCACCAACTCACAGATTA+AGG | + | chr1_2:3261480-3261499 | Msa0049760:CDS | 40.0% | |
| TCACTCCTTAATCTGTGAGT+TGG | - | chr1_2:3261488-3261507 | None:intergenic | 40.0% | |
| AATCTCTGTGTGCTCATTGA+TGG | - | chr1_2:3261548-3261567 | None:intergenic | 40.0% | |
| ATCAATGAGCACACAGAGAT+TGG | + | chr1_2:3261547-3261566 | Msa0049760:CDS | 40.0% | |
| ATTTACCTTGTAGCTTCCCT+CGG | + | chr1_2:3261570-3261589 | Msa0049760:CDS | 40.0% | |
| ! | AGATCAAGGATGAGGAGTTT+TGG | + | chr1_2:3261744-3261763 | Msa0049760:CDS | 40.0% |
| ! | GATCAAGGATGAGGAGTTTT+GGG | + | chr1_2:3261745-3261764 | Msa0049760:CDS | 40.0% |
| GCTAAGAGGAAAAAGGGTAA+TGG | + | chr1_2:3261836-3261855 | Msa0049760:CDS | 40.0% | |
| ! | AAGAGGAAAAAGGGTAATGG+TGG | + | chr1_2:3261839-3261858 | Msa0049760:CDS | 40.0% |
| !! | ATTGTTCTGGAGATGAGGAA+AGG | + | chr1_2:3261990-3262009 | Msa0049760:CDS | 40.0% |
| !! | TTGTTCTGGAGATGAGGAAA+GGG | + | chr1_2:3261991-3262010 | Msa0049760:CDS | 40.0% |
| GGATTGTTAGACAAAGGCAA+AGG | - | chr1_2:3262049-3262068 | None:intergenic | 40.0% | |
| TGCCTTTGTCTAACAATCCT+TGG | + | chr1_2:3262050-3262069 | Msa0049760:CDS | 40.0% | |
| AGCCAAGGATTGTTAGACAA+AGG | - | chr1_2:3262055-3262074 | None:intergenic | 40.0% | |
| ! | CATGATGATGTTGATGTTGG+TGG | - | chr1_2:3262120-3262139 | None:intergenic | 40.0% |
| AATGAAGGTTCAGTCTCCAA+TGG | + | chr1_2:3262142-3262161 | Msa0049760:CDS | 40.0% | |
| GAATGCATCAGAACATGAAG+AGG | + | chr1_2:3262204-3262223 | Msa0049760:CDS | 40.0% | |
| TCAGAACATGAAGAGGGTAA+TGG | + | chr1_2:3262211-3262230 | Msa0049760:CDS | 40.0% | |
| ! | ACATGAAGAGGGTAATGGTT+CGG | + | chr1_2:3262216-3262235 | Msa0049760:CDS | 40.0% |
| TCAGTTCCTTCATGCTGATA+AGG | - | chr1_2:3262247-3262266 | None:intergenic | 40.0% | |
| ! | ACTGGTTGTGTTGATGCTAT+TGG | + | chr1_2:3262331-3262350 | Msa0049760:CDS | 40.0% |
| ! | CTGGTTGTGTTGATGCTATT+GGG | + | chr1_2:3262332-3262351 | Msa0049760:CDS | 40.0% |
| ! | CCCCCAATTTTGCAATGAAA+TGG | - | chr1_2:3262381-3262400 | None:intergenic | 40.0% |
| !! | GCGCTGATTTGAAAAACATG+AGG | - | chr1_2:3262490-3262509 | None:intergenic | 40.0% |
| !! | CTACTTCTCGTGATTTTGAC+AGG | + | chr1_2:3262509-3262528 | Msa0049760:CDS | 40.0% |
| ATGAAACTGTCACTGCATTG+AGG | + | chr1_2:3262545-3262564 | Msa0049760:CDS | 40.0% | |
| ATCGAATGAGATGCTGTTGA+GGG | + | chr1_2:3262612-3262631 | Msa0049760:CDS | 40.0% | |
| !! | GGCTTTTGAAGGGAAAGAAA+GGG | + | chr1_2:3262633-3262652 | Msa0049760:CDS | 40.0% |
| ! | ATCGACTTCGACATAAAGCA+AGG | + | chr1_2:3262664-3262683 | Msa0049760:CDS | 40.0% |
| !! | GCTAAACTTTGGAACAAGCT+AGG | - | chr1_2:3262700-3262719 | None:intergenic | 40.0% |
| AAGCAAGAGCTGAATGAAAC+CGG | + | chr1_2:3262772-3262791 | Msa0049760:CDS | 40.0% | |
| CTGGATGAAAATCAAAGGGA+AGG | - | chr1_2:3262831-3262850 | None:intergenic | 40.0% | |
| TCGACAGACTTGAAGATGTA+AGG | + | chr1_2:3262854-3262873 | Msa0049760:CDS | 40.0% | |
| GACTTGAAGATGTAAGGCTT+TGG | + | chr1_2:3262860-3262879 | Msa0049760:CDS | 40.0% | |
| TGTGAAGGAACATGAAACTG+TGG | + | chr1_2:3262891-3262910 | Msa0049760:CDS | 40.0% | |
| CTTCACAAGACACTTCATGA+TGG | + | chr1_2:3262934-3262953 | Msa0049760:CDS | 40.0% | |
| AAGACACTTCATGATGGTAG+TGG | + | chr1_2:3262940-3262959 | Msa0049760:CDS | 40.0% | |
| !!! | AGGAGCATTGAGAGACTTTT+TGG | + | chr1_2:3262963-3262982 | Msa0049760:CDS | 40.0% |
| !!! | GGAGCATTGAGAGACTTTTT+GGG | + | chr1_2:3262964-3262983 | Msa0049760:CDS | 40.0% |
| TCCTCTATCTTGATCCTCAT+CGG | - | chr1_2:3263144-3263163 | None:intergenic | 40.0% | |
| AGATAGAGGAGATGTTAGCT+AGG | + | chr1_2:3263154-3263173 | Msa0049760:CDS | 40.0% | |
| GATAGAGGAGATGTTAGCTA+GGG | + | chr1_2:3263155-3263174 | Msa0049760:CDS | 40.0% | |
| AGATGTTAGCTAGGGAGATA+AGG | + | chr1_2:3263163-3263182 | Msa0049760:CDS | 40.0% | |
| TTCTCCAATTCCCAAAACTC+TGG | - | chr1_2:3263230-3263249 | None:intergenic | 40.0% | |
| !! | AGAAAGATGATAGTGGAGCA+TGG | + | chr1_2:3263246-3263265 | Msa0049760:CDS | 40.0% |
| CAAGAAGATACTGTGTAGAG+AGG | - | chr1_2:3263414-3263433 | None:intergenic | 40.0% | |
| CTCTCTACACAGTATCTTCT+TGG | + | chr1_2:3263412-3263431 | Msa0049760:CDS | 40.0% | |
| TGTCACCAACTCACAGATTA+AGG | + | chr1_2:3261480-3261499 | Msa0049760:CDS | 40.0% | |
| TCACTCCTTAATCTGTGAGT+TGG | - | chr1_2:3261488-3261507 | None:intergenic | 40.0% | |
| AATCTCTGTGTGCTCATTGA+TGG | - | chr1_2:3261548-3261567 | None:intergenic | 40.0% | |
| ATCAATGAGCACACAGAGAT+TGG | + | chr1_2:3261547-3261566 | Msa0049760:CDS | 40.0% | |
| ATTTACCTTGTAGCTTCCCT+CGG | + | chr1_2:3261570-3261589 | Msa0049760:CDS | 40.0% | |
| ! | AGATCAAGGATGAGGAGTTT+TGG | + | chr1_2:3261744-3261763 | Msa0049760:CDS | 40.0% |
| ! | GATCAAGGATGAGGAGTTTT+GGG | + | chr1_2:3261745-3261764 | Msa0049760:CDS | 40.0% |
| GCTAAGAGGAAAAAGGGTAA+TGG | + | chr1_2:3261836-3261855 | Msa0049760:CDS | 40.0% | |
| ! | AAGAGGAAAAAGGGTAATGG+TGG | + | chr1_2:3261839-3261858 | Msa0049760:CDS | 40.0% |
| !! | ATTGTTCTGGAGATGAGGAA+AGG | + | chr1_2:3261990-3262009 | Msa0049760:CDS | 40.0% |
| !! | TTGTTCTGGAGATGAGGAAA+GGG | + | chr1_2:3261991-3262010 | Msa0049760:CDS | 40.0% |
| GGATTGTTAGACAAAGGCAA+AGG | - | chr1_2:3262049-3262068 | None:intergenic | 40.0% | |
| TGCCTTTGTCTAACAATCCT+TGG | + | chr1_2:3262050-3262069 | Msa0049760:CDS | 40.0% | |
| AGCCAAGGATTGTTAGACAA+AGG | - | chr1_2:3262055-3262074 | None:intergenic | 40.0% | |
| ! | CATGATGATGTTGATGTTGG+TGG | - | chr1_2:3262120-3262139 | None:intergenic | 40.0% |
| AATGAAGGTTCAGTCTCCAA+TGG | + | chr1_2:3262142-3262161 | Msa0049760:CDS | 40.0% | |
| GAATGCATCAGAACATGAAG+AGG | + | chr1_2:3262204-3262223 | Msa0049760:CDS | 40.0% | |
| TCAGAACATGAAGAGGGTAA+TGG | + | chr1_2:3262211-3262230 | Msa0049760:CDS | 40.0% | |
| ! | ACATGAAGAGGGTAATGGTT+CGG | + | chr1_2:3262216-3262235 | Msa0049760:CDS | 40.0% |
| TCAGTTCCTTCATGCTGATA+AGG | - | chr1_2:3262247-3262266 | None:intergenic | 40.0% | |
| ! | ACTGGTTGTGTTGATGCTAT+TGG | + | chr1_2:3262331-3262350 | Msa0049760:CDS | 40.0% |
| ! | CTGGTTGTGTTGATGCTATT+GGG | + | chr1_2:3262332-3262351 | Msa0049760:CDS | 40.0% |
| ! | CCCCCAATTTTGCAATGAAA+TGG | - | chr1_2:3262381-3262400 | None:intergenic | 40.0% |
| !! | GCGCTGATTTGAAAAACATG+AGG | - | chr1_2:3262490-3262509 | None:intergenic | 40.0% |
| !! | CTACTTCTCGTGATTTTGAC+AGG | + | chr1_2:3262509-3262528 | Msa0049760:CDS | 40.0% |
| ATGAAACTGTCACTGCATTG+AGG | + | chr1_2:3262545-3262564 | Msa0049760:CDS | 40.0% | |
| ATCGAATGAGATGCTGTTGA+GGG | + | chr1_2:3262612-3262631 | Msa0049760:CDS | 40.0% | |
| !! | GGCTTTTGAAGGGAAAGAAA+GGG | + | chr1_2:3262633-3262652 | Msa0049760:CDS | 40.0% |
| ! | ATCGACTTCGACATAAAGCA+AGG | + | chr1_2:3262664-3262683 | Msa0049760:CDS | 40.0% |
| !! | GCTAAACTTTGGAACAAGCT+AGG | - | chr1_2:3262700-3262719 | None:intergenic | 40.0% |
| AAGCAAGAGCTGAATGAAAC+CGG | + | chr1_2:3262772-3262791 | Msa0049760:CDS | 40.0% | |
| CTGGATGAAAATCAAAGGGA+AGG | - | chr1_2:3262831-3262850 | None:intergenic | 40.0% | |
| TCGACAGACTTGAAGATGTA+AGG | + | chr1_2:3262854-3262873 | Msa0049760:CDS | 40.0% | |
| GACTTGAAGATGTAAGGCTT+TGG | + | chr1_2:3262860-3262879 | Msa0049760:CDS | 40.0% | |
| TGTGAAGGAACATGAAACTG+TGG | + | chr1_2:3262891-3262910 | Msa0049760:CDS | 40.0% | |
| CTTCACAAGACACTTCATGA+TGG | + | chr1_2:3262934-3262953 | Msa0049760:CDS | 40.0% | |
| AAGACACTTCATGATGGTAG+TGG | + | chr1_2:3262940-3262959 | Msa0049760:CDS | 40.0% | |
| !!! | AGGAGCATTGAGAGACTTTT+TGG | + | chr1_2:3262963-3262982 | Msa0049760:CDS | 40.0% |
| !!! | GGAGCATTGAGAGACTTTTT+GGG | + | chr1_2:3262964-3262983 | Msa0049760:CDS | 40.0% |
| TCCTCTATCTTGATCCTCAT+CGG | - | chr1_2:3263144-3263163 | None:intergenic | 40.0% | |
| AGATAGAGGAGATGTTAGCT+AGG | + | chr1_2:3263154-3263173 | Msa0049760:CDS | 40.0% | |
| GATAGAGGAGATGTTAGCTA+GGG | + | chr1_2:3263155-3263174 | Msa0049760:CDS | 40.0% | |
| AGATGTTAGCTAGGGAGATA+AGG | + | chr1_2:3263163-3263182 | Msa0049760:CDS | 40.0% | |
| TTCTCCAATTCCCAAAACTC+TGG | - | chr1_2:3263230-3263249 | None:intergenic | 40.0% | |
| !! | AGAAAGATGATAGTGGAGCA+TGG | + | chr1_2:3263246-3263265 | Msa0049760:CDS | 40.0% |
| CAAGAAGATACTGTGTAGAG+AGG | - | chr1_2:3263414-3263433 | None:intergenic | 40.0% | |
| CTCTCTACACAGTATCTTCT+TGG | + | chr1_2:3263412-3263431 | Msa0049760:CDS | 40.0% | |
| CTGCTGTTGTTCTTGACTTC+AGG | - | chr1_2:3261656-3261675 | None:intergenic | 45.0% | |
| GTTCTCTGCAGCAGAACATT+CGG | + | chr1_2:3261684-3261703 | Msa0049760:CDS | 45.0% | |
| TGAGCAGTTGTTGCTAAAGG+CGG | - | chr1_2:3261713-3261732 | None:intergenic | 45.0% | |
| GTCTGAGCAGTTGTTGCTAA+AGG | - | chr1_2:3261716-3261735 | None:intergenic | 45.0% | |
| AGCAACAACTGCTCAGACAT+TGG | + | chr1_2:3261718-3261737 | Msa0049760:CDS | 45.0% | |
| GCAACAACTGCTCAGACATT+GGG | + | chr1_2:3261719-3261738 | Msa0049760:CDS | 45.0% | |
| TCAGACATTGGGAGAGATCA+AGG | + | chr1_2:3261730-3261749 | Msa0049760:CDS | 45.0% | |
| ATTGGGAGAGATCAAGGATG+AGG | + | chr1_2:3261736-3261755 | Msa0049760:CDS | 45.0% | |
| !!! | GATGAGGAGTTTTGGGAGAA+GGG | + | chr1_2:3261752-3261771 | Msa0049760:CDS | 45.0% |
| TTGAAGAGGCTTGCAGAACA+TGG | + | chr1_2:3261785-3261804 | Msa0049760:CDS | 45.0% | |
| GCTTGCAGAACATGGATCTT+TGG | + | chr1_2:3261793-3261812 | Msa0049760:CDS | 45.0% | |
| ! | AGTTTGGCACAATTTGGAGC+TGG | + | chr1_2:3261899-3261918 | Msa0049760:CDS | 45.0% |
| !! | TGGTCTGTTCACAGTTTTGG+AGG | + | chr1_2:3261929-3261948 | Msa0049760:CDS | 45.0% |
| !!! | GGTCTGTTCACAGTTTTGGA+GGG | + | chr1_2:3261930-3261949 | Msa0049760:CDS | 45.0% |
| GTTACAGCAGATTCAAGCCA+AGG | - | chr1_2:3262070-3262089 | None:intergenic | 45.0% | |
| CTGACTCTCTGATGAACCAT+TGG | - | chr1_2:3262161-3262180 | None:intergenic | 45.0% | |
| AGAGTCAGAGTTTGAGCCTA+AGG | + | chr1_2:3262173-3262192 | Msa0049760:CDS | 45.0% | |
| ! | CATGAAGAGGGTAATGGTTC+GGG | + | chr1_2:3262217-3262236 | Msa0049760:CDS | 45.0% |
| ! | ATGAAGAGGGTAATGGTTCG+GGG | + | chr1_2:3262218-3262237 | Msa0049760:CDS | 45.0% |
| GGGAATCCTTATCAGCATGA+AGG | + | chr1_2:3262238-3262257 | Msa0049760:CDS | 45.0% | |
| TCAGCATGAAGGAACTGAAG+TGG | + | chr1_2:3262249-3262268 | Msa0049760:CDS | 45.0% | |
| !! | GAGCTTTTGAGCTTGCTTAC+TGG | + | chr1_2:3262313-3262332 | Msa0049760:CDS | 45.0% |
| ! | GTGTTGATGCTATTGGGTCA+AGG | + | chr1_2:3262338-3262357 | Msa0049760:CDS | 45.0% |
| TGCTATTGGGTCAAGGAATG+TGG | + | chr1_2:3262345-3262364 | Msa0049760:CDS | 45.0% | |
| !! | TTCTCGTGATTTTGACAGGG+TGG | + | chr1_2:3262513-3262532 | Msa0049760:CDS | 45.0% |
| TGCATTGAGGCTTCTAAACC+AGG | + | chr1_2:3262558-3262577 | Msa0049760:CDS | 45.0% | |
| ACTTGGGAATTGGTGTAACC+TGG | - | chr1_2:3262579-3262598 | None:intergenic | 45.0% | |
| CATCGAATGAGATGCTGTTG+AGG | + | chr1_2:3262611-3262630 | Msa0049760:CDS | 45.0% | |
| ! | ATGCTGTTGAGGGCTTTTGA+AGG | + | chr1_2:3262622-3262641 | Msa0049760:CDS | 45.0% |
| ! | TGCTGTTGAGGGCTTTTGAA+GGG | + | chr1_2:3262623-3262642 | Msa0049760:CDS | 45.0% |
| !! | GGGCTTTTGAAGGGAAAGAA+AGG | + | chr1_2:3262632-3262651 | Msa0049760:CDS | 45.0% |
| TGGCCCTTGAAGCTAAACTT+TGG | - | chr1_2:3262711-3262730 | None:intergenic | 45.0% | |
| TCCAAGCCATGTTCGAATCA+CGG | + | chr1_2:3262735-3262754 | Msa0049760:CDS | 45.0% | |
| AAAACCAGCAAGTCTGTCTC+CGG | - | chr1_2:3262794-3262813 | None:intergenic | 45.0% | |
| AAAGGGAAGGTTCAATGCCT+CGG | - | chr1_2:3262818-3262837 | None:intergenic | 45.0% | |
| ! | TCTTCAAGTCTGTCGACTAC+TGG | - | chr1_2:3262850-3262869 | None:intergenic | 45.0% |
| ! | GCTTTGGATGCTTCATGTGA+AGG | + | chr1_2:3262876-3262895 | Msa0049760:CDS | 45.0% |
| !! | ACACTTCATGATGGTAGTGG+AGG | + | chr1_2:3262943-3262962 | Msa0049760:CDS | 45.0% |
| !! | TAGGATTGGTGCTACGAATG+AGG | - | chr1_2:3262990-3263009 | None:intergenic | 45.0% |
| TGTTATGGCAGAGCAAGAAG+CGG | + | chr1_2:3263017-3263036 | Msa0049760:CDS | 45.0% | |
| TCCGATGAGGATCAAGATAG+AGG | + | chr1_2:3263140-3263159 | Msa0049760:CDS | 45.0% | |
| !! | AAGATGATAGTGGAGCATGG+AGG | + | chr1_2:3263249-3263268 | Msa0049760:CDS | 45.0% |
| !! | AGATGATAGTGGAGCATGGA+GGG | + | chr1_2:3263250-3263269 | Msa0049760:CDS | 45.0% |
| ATGCATGGGAGTCACTGATA+GGG | + | chr1_2:3263278-3263297 | Msa0049760:CDS | 45.0% | |
| AGGAGCAACAGCACTTACTT+TGG | + | chr1_2:3263374-3263393 | Msa0049760:CDS | 45.0% | |
| GGAGCAACAGCACTTACTTT+GGG | + | chr1_2:3263375-3263394 | Msa0049760:CDS | 45.0% | |
| CAACAGCACTTACTTTGGGT+TGG | + | chr1_2:3263379-3263398 | Msa0049760:CDS | 45.0% | |
| CACAGTATCTTCTTGGACAC+CGG | + | chr1_2:3263419-3263438 | Msa0049760:CDS | 45.0% | |
| TCAAGCTGGCTGAGAAAAAG+AGG | - | chr1_2:3263466-3263485 | None:intergenic | 45.0% | |
| CTGCTGTTGTTCTTGACTTC+AGG | - | chr1_2:3261656-3261675 | None:intergenic | 45.0% | |
| GTTCTCTGCAGCAGAACATT+CGG | + | chr1_2:3261684-3261703 | Msa0049760:CDS | 45.0% | |
| TGAGCAGTTGTTGCTAAAGG+CGG | - | chr1_2:3261713-3261732 | None:intergenic | 45.0% | |
| GTCTGAGCAGTTGTTGCTAA+AGG | - | chr1_2:3261716-3261735 | None:intergenic | 45.0% | |
| AGCAACAACTGCTCAGACAT+TGG | + | chr1_2:3261718-3261737 | Msa0049760:CDS | 45.0% | |
| GCAACAACTGCTCAGACATT+GGG | + | chr1_2:3261719-3261738 | Msa0049760:CDS | 45.0% | |
| TCAGACATTGGGAGAGATCA+AGG | + | chr1_2:3261730-3261749 | Msa0049760:CDS | 45.0% | |
| ATTGGGAGAGATCAAGGATG+AGG | + | chr1_2:3261736-3261755 | Msa0049760:CDS | 45.0% | |
| !!! | GATGAGGAGTTTTGGGAGAA+GGG | + | chr1_2:3261752-3261771 | Msa0049760:CDS | 45.0% |
| TTGAAGAGGCTTGCAGAACA+TGG | + | chr1_2:3261785-3261804 | Msa0049760:CDS | 45.0% | |
| GCTTGCAGAACATGGATCTT+TGG | + | chr1_2:3261793-3261812 | Msa0049760:CDS | 45.0% | |
| ! | AGTTTGGCACAATTTGGAGC+TGG | + | chr1_2:3261899-3261918 | Msa0049760:CDS | 45.0% |
| !! | TGGTCTGTTCACAGTTTTGG+AGG | + | chr1_2:3261929-3261948 | Msa0049760:CDS | 45.0% |
| !!! | GGTCTGTTCACAGTTTTGGA+GGG | + | chr1_2:3261930-3261949 | Msa0049760:CDS | 45.0% |
| GTTACAGCAGATTCAAGCCA+AGG | - | chr1_2:3262070-3262089 | None:intergenic | 45.0% | |
| CTGACTCTCTGATGAACCAT+TGG | - | chr1_2:3262161-3262180 | None:intergenic | 45.0% | |
| AGAGTCAGAGTTTGAGCCTA+AGG | + | chr1_2:3262173-3262192 | Msa0049760:CDS | 45.0% | |
| ! | CATGAAGAGGGTAATGGTTC+GGG | + | chr1_2:3262217-3262236 | Msa0049760:CDS | 45.0% |
| ! | ATGAAGAGGGTAATGGTTCG+GGG | + | chr1_2:3262218-3262237 | Msa0049760:CDS | 45.0% |
| GGGAATCCTTATCAGCATGA+AGG | + | chr1_2:3262238-3262257 | Msa0049760:CDS | 45.0% | |
| TCAGCATGAAGGAACTGAAG+TGG | + | chr1_2:3262249-3262268 | Msa0049760:CDS | 45.0% | |
| !! | GAGCTTTTGAGCTTGCTTAC+TGG | + | chr1_2:3262313-3262332 | Msa0049760:CDS | 45.0% |
| ! | GTGTTGATGCTATTGGGTCA+AGG | + | chr1_2:3262338-3262357 | Msa0049760:CDS | 45.0% |
| TGCTATTGGGTCAAGGAATG+TGG | + | chr1_2:3262345-3262364 | Msa0049760:CDS | 45.0% | |
| !! | TTCTCGTGATTTTGACAGGG+TGG | + | chr1_2:3262513-3262532 | Msa0049760:CDS | 45.0% |
| TGCATTGAGGCTTCTAAACC+AGG | + | chr1_2:3262558-3262577 | Msa0049760:CDS | 45.0% | |
| ACTTGGGAATTGGTGTAACC+TGG | - | chr1_2:3262579-3262598 | None:intergenic | 45.0% | |
| CATCGAATGAGATGCTGTTG+AGG | + | chr1_2:3262611-3262630 | Msa0049760:CDS | 45.0% | |
| ! | ATGCTGTTGAGGGCTTTTGA+AGG | + | chr1_2:3262622-3262641 | Msa0049760:CDS | 45.0% |
| ! | TGCTGTTGAGGGCTTTTGAA+GGG | + | chr1_2:3262623-3262642 | Msa0049760:CDS | 45.0% |
| !! | GGGCTTTTGAAGGGAAAGAA+AGG | + | chr1_2:3262632-3262651 | Msa0049760:CDS | 45.0% |
| TGGCCCTTGAAGCTAAACTT+TGG | - | chr1_2:3262711-3262730 | None:intergenic | 45.0% | |
| TCCAAGCCATGTTCGAATCA+CGG | + | chr1_2:3262735-3262754 | Msa0049760:CDS | 45.0% | |
| AAAACCAGCAAGTCTGTCTC+CGG | - | chr1_2:3262794-3262813 | None:intergenic | 45.0% | |
| AAAGGGAAGGTTCAATGCCT+CGG | - | chr1_2:3262818-3262837 | None:intergenic | 45.0% | |
| ! | TCTTCAAGTCTGTCGACTAC+TGG | - | chr1_2:3262850-3262869 | None:intergenic | 45.0% |
| ! | GCTTTGGATGCTTCATGTGA+AGG | + | chr1_2:3262876-3262895 | Msa0049760:CDS | 45.0% |
| !! | ACACTTCATGATGGTAGTGG+AGG | + | chr1_2:3262943-3262962 | Msa0049760:CDS | 45.0% |
| !! | TAGGATTGGTGCTACGAATG+AGG | - | chr1_2:3262990-3263009 | None:intergenic | 45.0% |
| TGTTATGGCAGAGCAAGAAG+CGG | + | chr1_2:3263017-3263036 | Msa0049760:CDS | 45.0% | |
| TCCGATGAGGATCAAGATAG+AGG | + | chr1_2:3263140-3263159 | Msa0049760:CDS | 45.0% | |
| !! | AAGATGATAGTGGAGCATGG+AGG | + | chr1_2:3263249-3263268 | Msa0049760:CDS | 45.0% |
| !! | AGATGATAGTGGAGCATGGA+GGG | + | chr1_2:3263250-3263269 | Msa0049760:CDS | 45.0% |
| ATGCATGGGAGTCACTGATA+GGG | + | chr1_2:3263278-3263297 | Msa0049760:CDS | 45.0% | |
| AGGAGCAACAGCACTTACTT+TGG | + | chr1_2:3263374-3263393 | Msa0049760:CDS | 45.0% | |
| GGAGCAACAGCACTTACTTT+GGG | + | chr1_2:3263375-3263394 | Msa0049760:CDS | 45.0% | |
| CAACAGCACTTACTTTGGGT+TGG | + | chr1_2:3263379-3263398 | Msa0049760:CDS | 45.0% | |
| CACAGTATCTTCTTGGACAC+CGG | + | chr1_2:3263419-3263438 | Msa0049760:CDS | 45.0% | |
| TCAAGCTGGCTGAGAAAAAG+AGG | - | chr1_2:3263466-3263485 | None:intergenic | 45.0% | |
| TCTTTCCGAGGGAAGCTACA+AGG | - | chr1_2:3261578-3261597 | None:intergenic | 50.0% | |
| TGTAGCTTCCCTCGGAAAGA+CGG | + | chr1_2:3261578-3261597 | Msa0049760:CDS | 50.0% | |
| TTCTCCACTGAAATCCCCAC+CGG | - | chr1_2:3261632-3261651 | None:intergenic | 50.0% | |
| !!! | GGATGAGGAGTTTTGGGAGA+AGG | + | chr1_2:3261751-3261770 | Msa0049760:CDS | 50.0% |
| !!! | AGGAGTTTTGGGAGAAGGGT+GGG | + | chr1_2:3261756-3261775 | Msa0049760:CDS | 50.0% |
| GGTGCAGAAATCACTTCAGC+AGG | - | chr1_2:3262028-3262047 | None:intergenic | 50.0% | |
| GTGGCTACCCTCACCAAAAT+TGG | - | chr1_2:3262101-3262120 | None:intergenic | 50.0% | |
| GAAGGAACTGAAGTGGAGAC+AGG | + | chr1_2:3262256-3262275 | Msa0049760:CDS | 50.0% | |
| TGAAGTGGAGACAGGAGAAG+AGG | + | chr1_2:3262264-3262283 | Msa0049760:CDS | 50.0% | |
| AGGAGAAGAGGACGAAGAAG+AGG | + | chr1_2:3262276-3262295 | Msa0049760:CDS | 50.0% | |
| GACTCTGATGGCTAAGGCTT+CGG | - | chr1_2:3262455-3262474 | None:intergenic | 50.0% | |
| CCTAGTGACTCTGATGGCTA+AGG | - | chr1_2:3262461-3262480 | None:intergenic | 50.0% | |
| CCTTAGCCATCAGAGTCACT+AGG | + | chr1_2:3262458-3262477 | Msa0049760:CDS | 50.0% | |
| CCAAAGCCTAGTGACTCTGA+TGG | - | chr1_2:3262467-3262486 | None:intergenic | 50.0% | |
| CCATCAGAGTCACTAGGCTT+TGG | + | chr1_2:3262464-3262483 | Msa0049760:CDS | 50.0% | |
| !! | TCGTGATTTTGACAGGGTGG+TGG | + | chr1_2:3262516-3262535 | Msa0049760:CDS | 50.0% |
| ! | TCGAACATGGCTTGGAGGAT+TGG | - | chr1_2:3262731-3262750 | None:intergenic | 50.0% |
| ! | GTGATTCGAACATGGCTTGG+AGG | - | chr1_2:3262736-3262755 | None:intergenic | 50.0% |
| CCAAGCCATGTTCGAATCAC+GGG | + | chr1_2:3262736-3262755 | Msa0049760:CDS | 50.0% | |
| CATGTTCGAATCACGGGTGT+GGG | + | chr1_2:3262742-3262761 | Msa0049760:CDS | 50.0% | |
| ATGTTCGAATCACGGGTGTG+GGG | + | chr1_2:3262743-3262762 | Msa0049760:CDS | 50.0% | |
| GCAAGAAGCGGAACACAATG+AGG | + | chr1_2:3263029-3263048 | Msa0049760:CDS | 50.0% | |
| AGGAACATCGTTGCTTGCGA+AGG | + | chr1_2:3263183-3263202 | Msa0049760:CDS | 50.0% | |
| ACATCGTTGCTTGCGAAGGA+AGG | + | chr1_2:3263187-3263206 | Msa0049760:CDS | 50.0% | |
| CATCGTTGCTTGCGAAGGAA+GGG | + | chr1_2:3263188-3263207 | Msa0049760:CDS | 50.0% | |
| !!! | TTGGAGAGGCACCAGAGTTT+TGG | + | chr1_2:3263216-3263235 | Msa0049760:CDS | 50.0% |
| !!! | TGGAGAGGCACCAGAGTTTT+GGG | + | chr1_2:3263217-3263236 | Msa0049760:CDS | 50.0% |
| !!! | GGCACCAGAGTTTTGGGAAT+TGG | + | chr1_2:3263223-3263242 | Msa0049760:CDS | 50.0% |
| CATGGAGGGTTCAGATGCAT+GGG | + | chr1_2:3263264-3263283 | Msa0049760:CDS | 50.0% | |
| GATGCATGGGAGTCACTGAT+AGG | + | chr1_2:3263277-3263296 | Msa0049760:CDS | 50.0% | |
| TCTTTCCGAGGGAAGCTACA+AGG | - | chr1_2:3261578-3261597 | None:intergenic | 50.0% | |
| TGTAGCTTCCCTCGGAAAGA+CGG | + | chr1_2:3261578-3261597 | Msa0049760:CDS | 50.0% | |
| TTCTCCACTGAAATCCCCAC+CGG | - | chr1_2:3261632-3261651 | None:intergenic | 50.0% | |
| !!! | GGATGAGGAGTTTTGGGAGA+AGG | + | chr1_2:3261751-3261770 | Msa0049760:CDS | 50.0% |
| !!! | AGGAGTTTTGGGAGAAGGGT+GGG | + | chr1_2:3261756-3261775 | Msa0049760:CDS | 50.0% |
| GGTGCAGAAATCACTTCAGC+AGG | - | chr1_2:3262028-3262047 | None:intergenic | 50.0% | |
| GTGGCTACCCTCACCAAAAT+TGG | - | chr1_2:3262101-3262120 | None:intergenic | 50.0% | |
| GAAGGAACTGAAGTGGAGAC+AGG | + | chr1_2:3262256-3262275 | Msa0049760:CDS | 50.0% | |
| TGAAGTGGAGACAGGAGAAG+AGG | + | chr1_2:3262264-3262283 | Msa0049760:CDS | 50.0% | |
| AGGAGAAGAGGACGAAGAAG+AGG | + | chr1_2:3262276-3262295 | Msa0049760:CDS | 50.0% | |
| GACTCTGATGGCTAAGGCTT+CGG | - | chr1_2:3262455-3262474 | None:intergenic | 50.0% | |
| CCTAGTGACTCTGATGGCTA+AGG | - | chr1_2:3262461-3262480 | None:intergenic | 50.0% | |
| CCTTAGCCATCAGAGTCACT+AGG | + | chr1_2:3262458-3262477 | Msa0049760:CDS | 50.0% | |
| CCAAAGCCTAGTGACTCTGA+TGG | - | chr1_2:3262467-3262486 | None:intergenic | 50.0% | |
| CCATCAGAGTCACTAGGCTT+TGG | + | chr1_2:3262464-3262483 | Msa0049760:CDS | 50.0% | |
| !! | TCGTGATTTTGACAGGGTGG+TGG | + | chr1_2:3262516-3262535 | Msa0049760:CDS | 50.0% |
| ! | TCGAACATGGCTTGGAGGAT+TGG | - | chr1_2:3262731-3262750 | None:intergenic | 50.0% |
| ! | GTGATTCGAACATGGCTTGG+AGG | - | chr1_2:3262736-3262755 | None:intergenic | 50.0% |
| CCAAGCCATGTTCGAATCAC+GGG | + | chr1_2:3262736-3262755 | Msa0049760:CDS | 50.0% | |
| CATGTTCGAATCACGGGTGT+GGG | + | chr1_2:3262742-3262761 | Msa0049760:CDS | 50.0% | |
| ATGTTCGAATCACGGGTGTG+GGG | + | chr1_2:3262743-3262762 | Msa0049760:CDS | 50.0% | |
| GCAAGAAGCGGAACACAATG+AGG | + | chr1_2:3263029-3263048 | Msa0049760:CDS | 50.0% | |
| AGGAACATCGTTGCTTGCGA+AGG | + | chr1_2:3263183-3263202 | Msa0049760:CDS | 50.0% | |
| ACATCGTTGCTTGCGAAGGA+AGG | + | chr1_2:3263187-3263206 | Msa0049760:CDS | 50.0% | |
| CATCGTTGCTTGCGAAGGAA+GGG | + | chr1_2:3263188-3263207 | Msa0049760:CDS | 50.0% | |
| !!! | TTGGAGAGGCACCAGAGTTT+TGG | + | chr1_2:3263216-3263235 | Msa0049760:CDS | 50.0% |
| !!! | TGGAGAGGCACCAGAGTTTT+GGG | + | chr1_2:3263217-3263236 | Msa0049760:CDS | 50.0% |
| !!! | GGCACCAGAGTTTTGGGAAT+TGG | + | chr1_2:3263223-3263242 | Msa0049760:CDS | 50.0% |
| CATGGAGGGTTCAGATGCAT+GGG | + | chr1_2:3263264-3263283 | Msa0049760:CDS | 50.0% | |
| GATGCATGGGAGTCACTGAT+AGG | + | chr1_2:3263277-3263296 | Msa0049760:CDS | 50.0% | |
| GCGAAGAACCGTCTTTCCGA+GGG | - | chr1_2:3261589-3261608 | None:intergenic | 55.0% | |
| !!! | GAGGAGTTTTGGGAGAAGGG+TGG | + | chr1_2:3261755-3261774 | Msa0049760:CDS | 55.0% |
| !!! | AGTTTTGGGAGAAGGGTGGG+AGG | + | chr1_2:3261759-3261778 | Msa0049760:CDS | 55.0% |
| AGGGTGGGAGGAGTTTGAAG+AGG | + | chr1_2:3261771-3261790 | Msa0049760:CDS | 55.0% | |
| !! | GACGAAGAAGAGGAGCATCG+CGG | + | chr1_2:3262286-3262305 | Msa0049760:CDS | 55.0% |
| TGGGGGATCTTGCATCTCCA+AGG | + | chr1_2:3262395-3262414 | Msa0049760:CDS | 55.0% | |
| GGGGGATCTTGCATCTCCAA+GGG | + | chr1_2:3262396-3262415 | Msa0049760:CDS | 55.0% | |
| GGGGATCTTGCATCTCCAAG+GGG | + | chr1_2:3262397-3262416 | Msa0049760:CDS | 55.0% | |
| CGGCTTATGGAAGTTCCCCT+TGG | - | chr1_2:3262415-3262434 | None:intergenic | 55.0% | |
| CCCGTGATTCGAACATGGCT+TGG | - | chr1_2:3262739-3262758 | None:intergenic | 55.0% | |
| CCACACCCGTGATTCGAACA+TGG | - | chr1_2:3262744-3262763 | None:intergenic | 55.0% | |
| CCATGTTCGAATCACGGGTG+TGG | + | chr1_2:3262741-3262760 | Msa0049760:CDS | 55.0% | |
| TGTTCGAATCACGGGTGTGG+GGG | + | chr1_2:3262744-3262763 | Msa0049760:CDS | 55.0% | |
| GAAACCGGAGACAGACTTGC+TGG | + | chr1_2:3262787-3262806 | Msa0049760:CDS | 55.0% | |
| !!! | CAGACTTGCTGGTTTTGCCG+AGG | + | chr1_2:3262798-3262817 | Msa0049760:CDS | 55.0% |
| AAGCGGAACACAATGAGGCG+AGG | + | chr1_2:3263034-3263053 | Msa0049760:CDS | 55.0% | |
| GGAACACAATGAGGCGAGGT+TGG | + | chr1_2:3263038-3263057 | Msa0049760:CDS | 55.0% | |
| TGATCACAGTGGCCTTCCAC+TGG | + | chr1_2:3263113-3263132 | Msa0049760:CDS | 55.0% | |
| TCATCGGACTCTCCAGTGGA+AGG | - | chr1_2:3263128-3263147 | None:intergenic | 55.0% | |
| TTCCACTGGAGAGTCCGATG+AGG | + | chr1_2:3263127-3263146 | Msa0049760:CDS | 55.0% | |
| ATCCTCATCGGACTCTCCAG+TGG | - | chr1_2:3263132-3263151 | None:intergenic | 55.0% | |
| TTGCTTGCGAAGGAAGGGAC+AGG | + | chr1_2:3263193-3263212 | Msa0049760:CDS | 55.0% | |
| TTGCGAAGGAAGGGACAGGT+TGG | + | chr1_2:3263197-3263216 | Msa0049760:CDS | 55.0% | |
| ! | AAGGAAGGGACAGGTTGGAG+AGG | + | chr1_2:3263202-3263221 | Msa0049760:CDS | 55.0% |
| GCATGGAGGGTTCAGATGCA+TGG | + | chr1_2:3263263-3263282 | Msa0049760:CDS | 55.0% | |
| CAGTGTTCACAAGCAGGAGC+AGG | + | chr1_2:3263350-3263369 | Msa0049760:CDS | 55.0% | |
| GTTCACAAGCAGGAGCAGGA+AGG | + | chr1_2:3263354-3263373 | Msa0049760:CDS | 55.0% | |
| GAGCTTCCAGCAACGTCAAC+CGG | - | chr1_2:3263441-3263460 | None:intergenic | 55.0% | |
| GCGAAGAACCGTCTTTCCGA+GGG | - | chr1_2:3261589-3261608 | None:intergenic | 55.0% | |
| !!! | GAGGAGTTTTGGGAGAAGGG+TGG | + | chr1_2:3261755-3261774 | Msa0049760:CDS | 55.0% |
| !!! | AGTTTTGGGAGAAGGGTGGG+AGG | + | chr1_2:3261759-3261778 | Msa0049760:CDS | 55.0% |
| AGGGTGGGAGGAGTTTGAAG+AGG | + | chr1_2:3261771-3261790 | Msa0049760:CDS | 55.0% | |
| !! | GACGAAGAAGAGGAGCATCG+CGG | + | chr1_2:3262286-3262305 | Msa0049760:CDS | 55.0% |
| TGGGGGATCTTGCATCTCCA+AGG | + | chr1_2:3262395-3262414 | Msa0049760:CDS | 55.0% | |
| GGGGGATCTTGCATCTCCAA+GGG | + | chr1_2:3262396-3262415 | Msa0049760:CDS | 55.0% | |
| GGGGATCTTGCATCTCCAAG+GGG | + | chr1_2:3262397-3262416 | Msa0049760:CDS | 55.0% | |
| CGGCTTATGGAAGTTCCCCT+TGG | - | chr1_2:3262415-3262434 | None:intergenic | 55.0% | |
| CCCGTGATTCGAACATGGCT+TGG | - | chr1_2:3262739-3262758 | None:intergenic | 55.0% | |
| CCACACCCGTGATTCGAACA+TGG | - | chr1_2:3262744-3262763 | None:intergenic | 55.0% | |
| CCATGTTCGAATCACGGGTG+TGG | + | chr1_2:3262741-3262760 | Msa0049760:CDS | 55.0% | |
| TGTTCGAATCACGGGTGTGG+GGG | + | chr1_2:3262744-3262763 | Msa0049760:CDS | 55.0% | |
| GAAACCGGAGACAGACTTGC+TGG | + | chr1_2:3262787-3262806 | Msa0049760:CDS | 55.0% | |
| !!! | CAGACTTGCTGGTTTTGCCG+AGG | + | chr1_2:3262798-3262817 | Msa0049760:CDS | 55.0% |
| AAGCGGAACACAATGAGGCG+AGG | + | chr1_2:3263034-3263053 | Msa0049760:CDS | 55.0% | |
| GGAACACAATGAGGCGAGGT+TGG | + | chr1_2:3263038-3263057 | Msa0049760:CDS | 55.0% | |
| TGATCACAGTGGCCTTCCAC+TGG | + | chr1_2:3263113-3263132 | Msa0049760:CDS | 55.0% | |
| TCATCGGACTCTCCAGTGGA+AGG | - | chr1_2:3263128-3263147 | None:intergenic | 55.0% | |
| TTCCACTGGAGAGTCCGATG+AGG | + | chr1_2:3263127-3263146 | Msa0049760:CDS | 55.0% | |
| ATCCTCATCGGACTCTCCAG+TGG | - | chr1_2:3263132-3263151 | None:intergenic | 55.0% | |
| TTGCTTGCGAAGGAAGGGAC+AGG | + | chr1_2:3263193-3263212 | Msa0049760:CDS | 55.0% | |
| TTGCGAAGGAAGGGACAGGT+TGG | + | chr1_2:3263197-3263216 | Msa0049760:CDS | 55.0% | |
| ! | AAGGAAGGGACAGGTTGGAG+AGG | + | chr1_2:3263202-3263221 | Msa0049760:CDS | 55.0% |
| GCATGGAGGGTTCAGATGCA+TGG | + | chr1_2:3263263-3263282 | Msa0049760:CDS | 55.0% | |
| CAGTGTTCACAAGCAGGAGC+AGG | + | chr1_2:3263350-3263369 | Msa0049760:CDS | 55.0% | |
| GTTCACAAGCAGGAGCAGGA+AGG | + | chr1_2:3263354-3263373 | Msa0049760:CDS | 55.0% | |
| GAGCTTCCAGCAACGTCAAC+CGG | - | chr1_2:3263441-3263460 | None:intergenic | 55.0% | |
| CGCGAAGAACCGTCTTTCCG+AGG | - | chr1_2:3261590-3261609 | None:intergenic | 60.0% | |
| GAAATCCCCACCGGCCTCAA+CGG | - | chr1_2:3261623-3261642 | None:intergenic | 60.0% | |
| ! | TGGACACCGGTTGACGTTGC+TGG | + | chr1_2:3263432-3263451 | Msa0049760:CDS | 60.0% |
| CGCGAAGAACCGTCTTTCCG+AGG | - | chr1_2:3261590-3261609 | None:intergenic | 60.0% | |
| GAAATCCCCACCGGCCTCAA+CGG | - | chr1_2:3261623-3261642 | None:intergenic | 60.0% | |
| ! | TGGACACCGGTTGACGTTGC+TGG | + | chr1_2:3263432-3263451 | Msa0049760:CDS | 60.0% |
| TTCGCAGCAGCCGTTGAGGC+CGG | + | chr1_2:3261610-3261629 | Msa0049760:CDS | 65.0% | |
| GAGGCCGGTGGGGATTTCAG+TGG | + | chr1_2:3261625-3261644 | Msa0049760:CDS | 65.0% | |
| TTCGCAGCAGCCGTTGAGGC+CGG | + | chr1_2:3261610-3261629 | Msa0049760:CDS | 65.0% | |
| GAGGCCGGTGGGGATTTCAG+TGG | + | chr1_2:3261625-3261644 | Msa0049760:CDS | 65.0% | |
| CGCGTTCGCAGCAGCCGTTG+AGG | + | chr1_2:3261606-3261625 | Msa0049760:CDS | 70.0% | |
| CAGCAGCCGTTGAGGCCGGT+GGG | + | chr1_2:3261614-3261633 | Msa0049760:CDS | 70.0% | |
| AGCAGCCGTTGAGGCCGGTG+GGG | + | chr1_2:3261615-3261634 | Msa0049760:CDS | 70.0% | |
| CGCGTTCGCAGCAGCCGTTG+AGG | + | chr1_2:3261606-3261625 | Msa0049760:CDS | 70.0% | |
| CAGCAGCCGTTGAGGCCGGT+GGG | + | chr1_2:3261614-3261633 | Msa0049760:CDS | 70.0% | |
| AGCAGCCGTTGAGGCCGGTG+GGG | + | chr1_2:3261615-3261634 | Msa0049760:CDS | 70.0% | |
| GCAGCAGCCGTTGAGGCCGG+TGG | + | chr1_2:3261613-3261632 | Msa0049760:CDS | 75.0% | |
| GCAGCAGCCGTTGAGGCCGG+TGG | + | chr1_2:3261613-3261632 | Msa0049760:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 3261449 | 3263485 | 3261449 | ID=Msa0049760;Name=Msa0049760 |
| chr1_2 | mRNA | 3261449 | 3263485 | 3261449 | ID=Msa0049760-mRNA-1;Parent=Msa0049760;Name=Msa0049760-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|678 |
| chr1_2 | exon | 3261449 | 3263485 | 3261449 | ID=Msa0049760-mRNA-1:exon:757;Parent=Msa0049760-mRNA-1 |
| chr1_2 | CDS | 3261449 | 3263485 | 3261449 | ID=Msa0049760-mRNA-1:cds;Parent=Msa0049760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
