Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810420 | XP_003612072.1 | 95.868 | 484 | 15 | 2 | 1 | 483 | 3 | 482 | 0.0 | 952 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810420 | sp|Q8GW96|AATP3_ARATH | 44.350 | 469 | 217 | 8 | 25 | 481 | 17 | 453 | 3.83e-133 | 397 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810420 | G7KF10 | 95.868 | 484 | 15 | 2 | 1 | 483 | 3 | 482 | 0.0 | 952 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa0810420 | -0.843618 | 1.254157e-58 | -8.615850e-47 |
| Msa0027020 | Msa0810420 | -0.813194 | 2.896383e-51 | -8.615850e-47 |
| Msa0027120 | Msa0810420 | -0.800957 | 1.129136e-48 | -8.615850e-47 |
| Msa0042210 | Msa0810420 | -0.805248 | 1.463277e-49 | -8.615850e-47 |
| Msa0047560 | Msa0810420 | -0.814212 | 1.727966e-51 | -8.615850e-47 |
| Msa0052180 | Msa0810420 | -0.813440 | 2.556843e-51 | -8.615850e-47 |
| Msa0065520 | Msa0810420 | -0.821102 | 4.826986e-53 | -8.615850e-47 |
| Msa0075080 | Msa0810420 | -0.840615 | 7.816826e-58 | -8.615850e-47 |
| Msa0075820 | Msa0810420 | -0.808940 | 2.418819e-50 | -8.615850e-47 |
| Msa0076590 | Msa0810420 | -0.818901 | 1.539068e-52 | -8.615850e-47 |
| Msa0078160 | Msa0810420 | -0.809250 | 2.075936e-50 | -8.615850e-47 |
| Msa0078170 | Msa0810420 | -0.804075 | 2.571222e-49 | -8.615850e-47 |
| Msa0086620 | Msa0810420 | -0.805487 | 1.303701e-49 | -8.615850e-47 |
| Msa0093360 | Msa0810420 | -0.826350 | 2.847156e-54 | -8.615850e-47 |
| Msa0095890 | Msa0810420 | -0.843598 | 1.269744e-58 | -8.615850e-47 |
| Msa0097220 | Msa0810420 | -0.809195 | 2.133506e-50 | -8.615850e-47 |
| Msa0120100 | Msa0810420 | -0.830234 | 3.293541e-55 | -8.615850e-47 |
| Msa0120160 | Msa0810420 | -0.826017 | 3.417054e-54 | -8.615850e-47 |
| Msa0606340 | Msa0810420 | -0.803894 | 2.803845e-49 | -8.615850e-47 |
| Msa0608720 | Msa0810420 | -0.806457 | 8.148887e-50 | -8.615850e-47 |
| Msa0615460 | Msa0810420 | -0.831381 | 1.723675e-55 | -8.615850e-47 |
| Msa0616570 | Msa0810420 | -0.811158 | 8.053051e-51 | -8.615850e-47 |
| Msa0619960 | Msa0810420 | -0.801374 | 9.281928e-49 | -8.615850e-47 |
| Msa0622450 | Msa0810420 | -0.822147 | 2.767324e-53 | -8.615850e-47 |
| Msa0644220 | Msa0810420 | -0.828131 | 1.066246e-54 | -8.615850e-47 |
| Msa0649160 | Msa0810420 | -0.808865 | 2.510146e-50 | -8.615850e-47 |
| Msa0654560 | Msa0810420 | -0.816661 | 4.929540e-52 | -8.615850e-47 |
| Msa0654850 | Msa0810420 | -0.826262 | 2.988143e-54 | -8.615850e-47 |
| Msa0655980 | Msa0810420 | -0.803321 | 3.686760e-49 | -8.615850e-47 |
| Msa0681100 | Msa0810420 | -0.810663 | 1.030614e-50 | -8.615850e-47 |
| Msa0684030 | Msa0810420 | -0.830614 | 2.658930e-55 | -8.615850e-47 |
| Msa0695250 | Msa0810420 | -0.805406 | 1.355433e-49 | -8.615850e-47 |
| Msa0698510 | Msa0810420 | -0.832010 | 1.206419e-55 | -8.615850e-47 |
| Msa0698680 | Msa0810420 | -0.824563 | 7.544151e-54 | -8.615850e-47 |
| Msa0699900 | Msa0810420 | -0.814239 | 1.705185e-51 | -8.615850e-47 |
| Msa0713570 | Msa0810420 | -0.808700 | 2.722981e-50 | -8.615850e-47 |
| Msa0739820 | Msa0810420 | -0.815622 | 8.413380e-52 | -8.615850e-47 |
| Msa0745010 | Msa0810420 | -0.815214 | 1.036942e-51 | -8.615850e-47 |
| Msa0750200 | Msa0810420 | -0.830733 | 2.487206e-55 | -8.615850e-47 |
| Msa0751490 | Msa0810420 | -0.812157 | 4.883537e-51 | -8.615850e-47 |
| Msa0753590 | Msa0810420 | -0.859807 | 3.202475e-63 | -8.615850e-47 |
| Msa0755550 | Msa0810420 | -0.809251 | 2.074778e-50 | -8.615850e-47 |
| Msa0784780 | Msa0810420 | -0.809935 | 1.479851e-50 | -8.615850e-47 |
| Msa0792490 | Msa0810420 | -0.803351 | 3.633864e-49 | -8.615850e-47 |
| Msa0793270 | Msa0810420 | 0.812478 | 4.155506e-51 | -8.615850e-47 |
| Msa0793530 | Msa0810420 | -0.803056 | 4.183028e-49 | -8.615850e-47 |
| Msa0794900 | Msa0810420 | -0.815530 | 8.819474e-52 | -8.615850e-47 |
| Msa0810420 | Msa0817880 | -0.806879 | 6.638788e-50 | -8.615850e-47 |
| Msa0810420 | Msa0829250 | -0.805293 | 1.431627e-49 | -8.615850e-47 |
| Msa0810420 | Msa0833200 | -0.843366 | 1.464260e-58 | -8.615850e-47 |
| Msa0810420 | Msa0835050 | -0.811497 | 6.797065e-51 | -8.615850e-47 |
| Msa0810420 | Msa0858250 | -0.811511 | 6.748581e-51 | -8.615850e-47 |
| Msa0810420 | Msa0868500 | -0.829366 | 5.358326e-55 | -8.615850e-47 |
| Msa0810420 | Msa0868510 | -0.818313 | 2.091908e-52 | -8.615850e-47 |
| Msa0810420 | Msa0868520 | -0.807898 | 4.037190e-50 | -8.615850e-47 |
| Msa0810420 | Msa0882480 | -0.815866 | 7.421126e-52 | -8.615850e-47 |
| Msa0810420 | Msa0888520 | -0.808187 | 3.502815e-50 | -8.615850e-47 |
| Msa0810420 | Msa0935840 | -0.834366 | 3.124051e-56 | -8.615850e-47 |
| Msa0810420 | Msa0941410 | -0.814075 | 1.852846e-51 | -8.615850e-47 |
| Msa0810420 | Msa0941420 | -0.806734 | 7.124367e-50 | -8.615850e-47 |
| Msa0810420 | Msa0945160 | -0.808516 | 2.980691e-50 | -8.615850e-47 |
| Msa0810420 | Msa0958960 | -0.830199 | 3.359856e-55 | -8.615850e-47 |
| Msa0810420 | Msa0964400 | -0.809899 | 1.506327e-50 | -8.615850e-47 |
| Msa0810420 | Msa0973010 | -0.835357 | 1.758475e-56 | -8.615850e-47 |
| Msa0810420 | Msa0978540 | -0.812124 | 4.963578e-51 | -8.615850e-47 |
| Msa0810420 | Msa0978550 | -0.815076 | 1.112334e-51 | -8.615850e-47 |
| Msa0810420 | Msa0978560 | -0.801968 | 7.009360e-49 | -8.615850e-47 |
| Msa0810420 | Msa0984230 | -0.804823 | 1.795157e-49 | -8.615850e-47 |
| Msa0810420 | Msa1002550 | -0.836960 | 6.889945e-57 | -8.615850e-47 |
| Msa0810420 | Msa1027910 | 0.815727 | 7.973355e-52 | -8.615850e-47 |
| Msa0810420 | Msa1028890 | -0.823441 | 1.383228e-53 | -8.615850e-47 |
| Msa0810420 | Msa1031190 | -0.817462 | 3.257020e-52 | -8.615850e-47 |
| Msa0810420 | Msa1036260 | -0.824953 | 6.104390e-54 | -8.615850e-47 |
| Msa0810420 | Msa1037440 | -0.812990 | 3.210780e-51 | -8.615850e-47 |
| Msa0810420 | Msa1045750 | -0.812426 | 4.264837e-51 | -8.615850e-47 |
| Msa0810420 | Msa1058260 | 0.807682 | 4.486876e-50 | -8.615850e-47 |
| Msa0810420 | Msa1058280 | 0.832703 | 8.123438e-56 | -8.615850e-47 |
| Msa0810420 | Msa1058550 | -0.820211 | 7.734013e-53 | -8.615850e-47 |
| Msa0810420 | Msa1068010 | -0.822495 | 2.298074e-53 | -8.615850e-47 |
| Msa0810420 | Msa1070370 | -0.817341 | 3.467726e-52 | -8.615850e-47 |
| Msa0810420 | Msa1078120 | -0.825606 | 4.278052e-54 | -8.615850e-47 |
| Msa0810420 | Msa1084890 | 0.816442 | 5.518917e-52 | -8.615850e-47 |
| Msa0810420 | Msa1091400 | -0.819309 | 1.243002e-52 | -8.615850e-47 |
| Msa0810420 | Msa1095880 | -0.810957 | 8.900608e-51 | -8.615850e-47 |
| Msa0810420 | Msa1119420 | -0.813595 | 2.363565e-51 | -8.615850e-47 |
| Msa0810420 | Msa1121920 | -0.813064 | 3.092555e-51 | -8.615850e-47 |
| Msa0810420 | Msa1122710 | -0.805435 | 1.337008e-49 | -8.615850e-47 |
| Msa0810420 | Msa1129510 | -0.801186 | 1.014008e-48 | -8.615850e-47 |
| Msa0810420 | Msa1130150 | -0.836352 | 9.838475e-57 | -8.615850e-47 |
| Msa0810420 | Msa1132250 | -0.800229 | 1.589300e-48 | -8.615850e-47 |
| Msa0810420 | Msa1134800 | -0.806939 | 6.446128e-50 | -8.615850e-47 |
| Msa0810420 | Msa1137210 | 0.822166 | 2.739875e-53 | -8.615850e-47 |
| Msa0810420 | Msa1156100 | -0.828340 | 9.491021e-55 | -8.615850e-47 |
| Msa0810420 | Msa1156430 | -0.810435 | 1.154475e-50 | -8.615850e-47 |
| Msa0810420 | Msa1158180 | -0.814890 | 1.223465e-51 | -8.615850e-47 |
| Msa0810420 | Msa1161060 | -0.808211 | 3.461449e-50 | -8.615850e-47 |
| Msa0810420 | Msa1162870 | 0.816203 | 6.240100e-52 | -8.615850e-47 |
| Msa0810420 | Msa1190670 | -0.804779 | 1.833717e-49 | -8.615850e-47 |
| Msa0810420 | Msa1191530 | -0.808342 | 3.246198e-50 | -8.615850e-47 |
| Msa0810420 | Msa1199700 | -0.805529 | 1.277795e-49 | -8.615850e-47 |
| Msa0810420 | Msa1203320 | -0.820024 | 8.535228e-53 | -8.615850e-47 |
| Msa0810420 | Msa1228260 | -0.808520 | 2.975161e-50 | -8.615850e-47 |
| Msa0810420 | Msa1266750 | -0.807783 | 4.270693e-50 | -8.615850e-47 |
| Msa0810420 | Msa1269730 | -0.828146 | 1.057447e-54 | -8.615850e-47 |
| Msa0810420 | Msa1271220 | -0.807570 | 4.738685e-50 | -8.615850e-47 |
| Msa0810420 | Msa1297490 | -0.804680 | 1.923465e-49 | -8.615850e-47 |
| Msa0810420 | Msa1297550 | -0.810297 | 1.236423e-50 | -8.615850e-47 |
| Msa0810420 | Msa1303690 | -0.812024 | 5.219877e-51 | -8.615850e-47 |
| Msa0810420 | Msa1315880 | -0.800576 | 1.350629e-48 | -8.615850e-47 |
| Msa0810420 | Msa1325260 | -0.820532 | 6.525267e-53 | -8.615850e-47 |
| Msa0810420 | Msa1330080 | -0.803192 | 3.919443e-49 | -8.615850e-47 |
| Msa0810420 | Msa1341710 | -0.810125 | 1.346563e-50 | -8.615850e-47 |
| Msa0810420 | Msa1341850 | -0.806836 | 6.780183e-50 | -8.615850e-47 |
| Msa0810420 | Msa1350590 | -0.816758 | 4.688810e-52 | -8.615850e-47 |
| Msa0810420 | Msa1363170 | -0.815381 | 9.520824e-52 | -8.615850e-47 |
| Msa0810420 | Msa1373930 | -0.802773 | 4.785343e-49 | -8.615850e-47 |
| Msa0810420 | Msa1375120 | -0.801700 | 7.956320e-49 | -8.615850e-47 |
| Msa0810420 | Msa1375650 | -0.815786 | 7.735430e-52 | -8.615850e-47 |
| Msa0810420 | Msa1379000 | 0.998320 | 9.364276e-262 | -8.615850e-47 |
| Msa0810420 | Msa1379270 | -0.806034 | 1.000585e-49 | -8.615850e-47 |
| Msa0810420 | Msa1395380 | -0.808056 | 3.735185e-50 | -8.615850e-47 |
| Msa0810420 | Msa1407900 | 0.953549 | 2.148226e-111 | -8.615850e-47 |
| Msa0810420 | Msa1408230 | -0.817275 | 3.588495e-52 | -8.615850e-47 |
| Msa0810420 | Msa1412330 | -0.843190 | 1.631737e-58 | -8.615850e-47 |
| Msa0810420 | Msa1415510 | -0.806228 | 9.110444e-50 | -8.615850e-47 |
| Msa0810420 | Msa1417270 | 0.996257 | 2.844628e-225 | -8.615850e-47 |
| Msa0810420 | Msa1423560 | -0.804648 | 1.952591e-49 | -8.615850e-47 |
| Msa0810420 | Msa1429180 | -0.802455 | 5.563867e-49 | -8.615850e-47 |
| Msa0810420 | Msa1432360 | 0.828536 | 8.514447e-55 | -8.615850e-47 |
| Msa0810420 | Msa1439000 | -0.809897 | 1.508023e-50 | -8.615850e-47 |
| Msa0810420 | Msa1454300 | -0.803467 | 3.438427e-49 | -8.615850e-47 |
| Msa0810420 | Msa1460340 | -0.808354 | 3.227359e-50 | -8.615850e-47 |
| Msa0810420 | Msa1462700 | -0.814267 | 1.681022e-51 | -8.615850e-47 |
| Msa0122930 | Msa0810420 | -0.847382 | 1.198344e-59 | -8.615850e-47 |
| Msa0127350 | Msa0810420 | -0.805152 | 1.532379e-49 | -8.615850e-47 |
| Msa0137560 | Msa0810420 | 0.801259 | 9.796000e-49 | -8.615850e-47 |
| Msa0167160 | Msa0810420 | -0.809346 | 1.980227e-50 | -8.615850e-47 |
| Msa0167570 | Msa0810420 | -0.839728 | 1.331811e-57 | -8.615850e-47 |
| Msa0181560 | Msa0810420 | -0.804352 | 2.250973e-49 | -8.615850e-47 |
| Msa0184900 | Msa0810420 | -0.803410 | 3.532688e-49 | -8.615850e-47 |
| Msa0185540 | Msa0810420 | -0.825495 | 4.543557e-54 | -8.615850e-47 |
| Msa0211590 | Msa0810420 | -0.814767 | 1.303018e-51 | -8.615850e-47 |
| Msa0213590 | Msa0810420 | -0.807013 | 6.217781e-50 | -8.615850e-47 |
| Msa0224180 | Msa0810420 | -0.809052 | 2.289227e-50 | -8.615850e-47 |
| Msa0225080 | Msa0810420 | -0.807697 | 4.452922e-50 | -8.615850e-47 |
| Msa0225190 | Msa0810420 | -0.807895 | 4.042075e-50 | -8.615850e-47 |
| Msa0225280 | Msa0810420 | -0.808554 | 2.925841e-50 | -8.615850e-47 |
| Msa0367380 | Msa0810420 | -0.817345 | 3.460942e-52 | -8.615850e-47 |
| Msa0367600 | Msa0810420 | -0.813037 | 3.134134e-51 | -8.615850e-47 |
| Msa0375570 | Msa0810420 | -0.804406 | 2.194043e-49 | -8.615850e-47 |
| Msa0377990 | Msa0810420 | -0.805036 | 1.620785e-49 | -8.615850e-47 |
| Msa0380470 | Msa0810420 | -0.816305 | 5.922850e-52 | -8.615850e-47 |
| Msa0382020 | Msa0810420 | -0.811495 | 6.804766e-51 | -8.615850e-47 |
| Msa0382050 | Msa0810420 | -0.838292 | 3.136025e-57 | -8.615850e-47 |
| Msa0386230 | Msa0810420 | -0.819087 | 1.396444e-52 | -8.615850e-47 |
| Msa0390760 | Msa0810420 | -0.806325 | 8.688050e-50 | -8.615850e-47 |
| Msa0393880 | Msa0810420 | -0.814729 | 1.328221e-51 | -8.615850e-47 |
| Msa0397420 | Msa0810420 | -0.813542 | 2.427750e-51 | -8.615850e-47 |
| Msa0415210 | Msa0810420 | -0.802204 | 6.269706e-49 | -8.615850e-47 |
| Msa0424220 | Msa0810420 | -0.813572 | 2.391769e-51 | -8.615850e-47 |
| Msa0427230 | Msa0810420 | -0.803885 | 2.815696e-49 | -8.615850e-47 |
| Msa0427600 | Msa0810420 | -0.807110 | 5.931648e-50 | -8.615850e-47 |
| Msa0428280 | Msa0810420 | -0.816407 | 5.618967e-52 | -8.615850e-47 |
| Msa0428300 | Msa0810420 | -0.818108 | 2.328078e-52 | -8.615850e-47 |
| Msa0429990 | Msa0810420 | -0.815843 | 7.511449e-52 | -8.615850e-47 |
| Msa0431270 | Msa0810420 | -0.816462 | 5.462398e-52 | -8.615850e-47 |
| Msa0431550 | Msa0810420 | -0.836033 | 1.186320e-56 | -8.615850e-47 |
| Msa0436660 | Msa0810420 | -0.808682 | 2.747521e-50 | -8.615850e-47 |
| Msa0439090 | Msa0810420 | -0.807141 | 5.842390e-50 | -8.615850e-47 |
| Msa0444770 | Msa0810420 | -0.806657 | 7.395568e-50 | -8.615850e-47 |
| Msa0446110 | Msa0810420 | -0.812952 | 3.271406e-51 | -8.615850e-47 |
| Msa0471130 | Msa0810420 | -0.804135 | 2.498238e-49 | -8.615850e-47 |
| Msa0473740 | Msa0810420 | -0.806968 | 6.356639e-50 | -8.615850e-47 |
| Msa0474630 | Msa0810420 | -0.827565 | 1.458260e-54 | -8.615850e-47 |
| Msa0474660 | Msa0810420 | -0.815190 | 1.049695e-51 | -8.615850e-47 |
| Msa0476140 | Msa0810420 | -0.818669 | 1.736999e-52 | -8.615850e-47 |
| Msa0476560 | Msa0810420 | -0.834996 | 2.169425e-56 | -8.615850e-47 |
| Msa0261350 | Msa0810420 | -0.803958 | 2.718973e-49 | -8.615850e-47 |
| Msa0262350 | Msa0810420 | -0.802229 | 6.195275e-49 | -8.615850e-47 |
| Msa0266150 | Msa0810420 | -0.802672 | 5.020051e-49 | -8.615850e-47 |
| Msa0266330 | Msa0810420 | -0.820573 | 6.387630e-53 | -8.615850e-47 |
| Msa0292060 | Msa0810420 | -0.800443 | 1.437948e-48 | -8.615850e-47 |
| Msa0299130 | Msa0810420 | -0.805274 | 1.444732e-49 | -8.615850e-47 |
| Msa0300130 | Msa0810420 | -0.810420 | 1.162853e-50 | -8.615850e-47 |
| Msa0340700 | Msa0810420 | -0.806898 | 6.578752e-50 | -8.615850e-47 |
| Msa0341950 | Msa0810420 | -0.821747 | 3.426240e-53 | -8.615850e-47 |
| Msa0347280 | Msa0810420 | -0.803938 | 2.745698e-49 | -8.615850e-47 |
| Msa0484590 | Msa0810420 | -0.817651 | 2.952854e-52 | -8.615850e-47 |
| Msa0487480 | Msa0810420 | -0.813828 | 2.100453e-51 | -8.615850e-47 |
| Msa0489330 | Msa0810420 | -0.804005 | 2.657872e-49 | -8.615850e-47 |
| Msa0490740 | Msa0810420 | -0.802523 | 5.387147e-49 | -8.615850e-47 |
| Msa0492330 | Msa0810420 | -0.832561 | 8.809546e-56 | -8.615850e-47 |
| Msa0500580 | Msa0810420 | -0.822826 | 1.924600e-53 | -8.615850e-47 |
| Msa0506700 | Msa0810420 | -0.821675 | 3.559751e-53 | -8.615850e-47 |
| Msa0518150 | Msa0810420 | -0.800374 | 1.485272e-48 | -8.615850e-47 |
| Msa0519070 | Msa0810420 | -0.815782 | 7.750449e-52 | -8.615850e-47 |
| Msa0519090 | Msa0810420 | -0.820759 | 5.788376e-53 | -8.615850e-47 |
| Msa0519100 | Msa0810420 | -0.831514 | 1.599199e-55 | -8.615850e-47 |
| Msa0528180 | Msa0810420 | 0.816320 | 5.876386e-52 | -8.615850e-47 |
| Msa0558570 | Msa0810420 | 0.829972 | 3.816192e-55 | -8.615850e-47 |
| Msa0561450 | Msa0810420 | -0.822952 | 1.798716e-53 | -8.615850e-47 |
| Msa0580890 | Msa0810420 | -0.819167 | 1.338984e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810420 | MtrunA17_Chr5g0404661 | 95.868 | 484 | 15 | 2 | 1 | 483 | 3 | 482 | 0.0 | 952 |
| Msa0810420 | MtrunA17_Chr3g0134831 | 79.522 | 293 | 57 | 2 | 182 | 472 | 1 | 292 | 9.33e-172 | 484 |
| Msa0810420 | MtrunA17_Chr5g0404651 | 40.764 | 471 | 241 | 8 | 18 | 473 | 9 | 456 | 1.44e-123 | 370 |
| Msa0810420 | MtrunA17_Chr8g0372701 | 41.075 | 465 | 235 | 6 | 14 | 466 | 15 | 452 | 1.99e-121 | 364 |
| Msa0810420 | MtrunA17_Chr2g0315911 | 41.957 | 460 | 227 | 8 | 33 | 484 | 21 | 448 | 3.70e-117 | 352 |
| Msa0810420 | MtrunA17_Chr2g0315981 | 41.667 | 456 | 234 | 8 | 33 | 479 | 14 | 446 | 9.39e-113 | 340 |
| Msa0810420 | MtrunA17_Chr2g0315921 | 41.573 | 445 | 225 | 8 | 33 | 467 | 19 | 438 | 1.11e-112 | 340 |
| Msa0810420 | MtrunA17_Chr2g0315991 | 41.593 | 452 | 229 | 8 | 33 | 479 | 20 | 441 | 2.25e-112 | 340 |
| Msa0810420 | MtrunA17_Chr2g0315971 | 41.447 | 456 | 232 | 7 | 33 | 481 | 14 | 441 | 2.34e-111 | 345 |
| Msa0810420 | MtrunA17_Chr2g0315971 | 51.095 | 274 | 119 | 3 | 196 | 467 | 443 | 703 | 1.25e-82 | 270 |
| Msa0810420 | MtrunA17_Chr2g0316041 | 41.809 | 409 | 205 | 6 | 80 | 479 | 2 | 386 | 1.13e-100 | 309 |
| Msa0810420 | MtrunA17_Chr1g0155131 | 38.562 | 459 | 254 | 8 | 23 | 467 | 7 | 451 | 5.92e-97 | 300 |
| Msa0810420 | MtrunA17_Chr2g0316021 | 37.744 | 461 | 216 | 8 | 33 | 484 | 14 | 412 | 9.75e-97 | 298 |
| Msa0810420 | MtrunA17_Chr2g0292561 | 37.885 | 454 | 259 | 8 | 23 | 467 | 10 | 449 | 6.33e-96 | 297 |
| Msa0810420 | MtrunA17_Chr6g0452401 | 37.744 | 461 | 234 | 9 | 43 | 467 | 5 | 448 | 1.18e-93 | 292 |
| Msa0810420 | MtrunA17_Chr6g0452451 | 38.034 | 468 | 250 | 10 | 27 | 466 | 13 | 468 | 1.48e-93 | 293 |
| Msa0810420 | MtrunA17_Chr7g0215951 | 36.943 | 471 | 257 | 8 | 22 | 467 | 5 | 460 | 1.13e-91 | 288 |
| Msa0810420 | MtrunA17_Chr6g0452391 | 37.045 | 467 | 259 | 9 | 24 | 467 | 5 | 459 | 6.57e-91 | 286 |
| Msa0810420 | MtrunA17_Chr6g0452411 | 41.534 | 378 | 181 | 7 | 118 | 467 | 1 | 366 | 4.03e-90 | 281 |
| Msa0810420 | MtrunA17_Chr6g0452371 | 37.045 | 467 | 259 | 8 | 24 | 467 | 7 | 461 | 4.67e-89 | 281 |
| Msa0810420 | MtrunA17_Chr4g0059811 | 34.325 | 504 | 270 | 13 | 22 | 485 | 10 | 492 | 3.60e-87 | 276 |
| Msa0810420 | MtrunA17_Chr1g0155121 | 37.650 | 417 | 212 | 8 | 81 | 467 | 63 | 461 | 3.35e-86 | 273 |
| Msa0810420 | MtrunA17_Chr6g0466811 | 39.394 | 396 | 204 | 8 | 84 | 467 | 80 | 451 | 1.29e-85 | 272 |
| Msa0810420 | MtrunA17_Chr2g0308991 | 37.740 | 416 | 218 | 10 | 83 | 483 | 67 | 456 | 4.10e-85 | 271 |
| Msa0810420 | MtrunA17_Chr4g0072491 | 34.573 | 457 | 256 | 8 | 20 | 452 | 6 | 443 | 5.61e-85 | 271 |
| Msa0810420 | MtrunA17_Chr6g0452361 | 49.587 | 242 | 108 | 3 | 229 | 467 | 1 | 231 | 3.54e-73 | 232 |
| Msa0810420 | MtrunA17_Chr5g0404671 | 85.366 | 123 | 18 | 0 | 363 | 485 | 1 | 123 | 1.43e-69 | 219 |
| Msa0810420 | MtrunA17_Chr7g0276031 | 34.066 | 364 | 184 | 9 | 109 | 467 | 93 | 405 | 4.18e-66 | 220 |
| Msa0810420 | MtrunA17_Chr3g0127381 | 35.342 | 365 | 180 | 10 | 112 | 467 | 97 | 414 | 4.26e-66 | 221 |
| Msa0810420 | MtrunA17_Chr5g0404681 | 77.778 | 126 | 27 | 1 | 158 | 283 | 28 | 152 | 7.02e-66 | 209 |
| Msa0810420 | MtrunA17_Chr5g0404691 | 63.158 | 171 | 46 | 2 | 302 | 472 | 1 | 154 | 1.33e-61 | 198 |
| Msa0810420 | MtrunA17_Chr8g0346371 | 30.913 | 427 | 230 | 12 | 55 | 467 | 39 | 414 | 2.79e-59 | 202 |
| Msa0810420 | MtrunA17_Chr6g0452481 | 42.424 | 264 | 127 | 5 | 213 | 467 | 7 | 254 | 7.14e-59 | 196 |
| Msa0810420 | MtrunA17_Chr3g0134841 | 72.477 | 109 | 29 | 1 | 14 | 121 | 26 | 134 | 5.72e-51 | 169 |
| Msa0810420 | MtrunA17_Chr1g0148871 | 41.129 | 124 | 71 | 1 | 346 | 469 | 12 | 133 | 3.68e-23 | 96.3 |
| Msa0810420 | MtrunA17_Chr5g0404451 | 84.091 | 44 | 7 | 0 | 396 | 439 | 1 | 44 | 4.31e-18 | 78.2 |
| Msa0810420 | MtrunA17_Chr3g0145011 | 31.902 | 163 | 88 | 6 | 249 | 404 | 166 | 312 | 1.23e-11 | 66.2 |
| Msa0810420 | MtrunA17_Chr3g0141901 | 31.288 | 163 | 89 | 6 | 249 | 404 | 163 | 309 | 1.97e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810420 | AT2G18193.1 | 44.350 | 469 | 217 | 8 | 25 | 481 | 17 | 453 | 3.90e-134 | 397 |
| Msa0810420 | AT2G18190.1 | 43.515 | 478 | 226 | 8 | 12 | 474 | 4 | 452 | 5.97e-132 | 391 |
| Msa0810420 | AT3G50940.1 | 44.685 | 461 | 230 | 6 | 10 | 467 | 3 | 441 | 1.52e-130 | 386 |
| Msa0810420 | AT5G17760.1 | 43.413 | 463 | 246 | 5 | 15 | 471 | 6 | 458 | 9.92e-124 | 370 |
| Msa0810420 | AT5G17730.1 | 43.137 | 459 | 240 | 7 | 12 | 467 | 3 | 443 | 2.88e-121 | 363 |
| Msa0810420 | AT5G17740.1 | 43.355 | 459 | 240 | 7 | 15 | 467 | 6 | 450 | 3.44e-120 | 362 |
| Msa0810420 | AT3G50930.1 | 42.760 | 442 | 230 | 5 | 34 | 467 | 73 | 499 | 7.98e-118 | 358 |
| Msa0810420 | AT4G05380.1 | 39.496 | 476 | 263 | 8 | 10 | 479 | 3 | 459 | 2.77e-109 | 332 |
| Msa0810420 | AT1G43910.1 | 37.234 | 470 | 259 | 9 | 10 | 467 | 2 | 447 | 3.62e-98 | 304 |
| Msa0810420 | AT5G17750.1 | 39.110 | 427 | 214 | 6 | 15 | 436 | 6 | 391 | 1.24e-97 | 300 |
| Msa0810420 | AT3G28510.1 | 41.565 | 409 | 201 | 7 | 82 | 468 | 67 | 459 | 2.61e-96 | 301 |
| Msa0810420 | AT3G28610.1 | 39.062 | 448 | 224 | 11 | 55 | 485 | 52 | 467 | 3.28e-94 | 294 |
| Msa0810420 | AT3G28600.1 | 37.768 | 466 | 245 | 11 | 18 | 467 | 10 | 446 | 7.66e-94 | 293 |
| Msa0810420 | AT4G25835.1 | 34.316 | 475 | 279 | 10 | 27 | 485 | 9 | 466 | 6.97e-91 | 286 |
| Msa0810420 | AT3G28580.1 | 36.831 | 486 | 247 | 13 | 5 | 463 | 3 | 455 | 1.72e-89 | 282 |
| Msa0810420 | AT3G28570.2 | 36.747 | 498 | 258 | 14 | 1 | 483 | 1 | 456 | 2.32e-89 | 281 |
| Msa0810420 | AT3G28570.1 | 36.939 | 490 | 252 | 14 | 9 | 483 | 2 | 449 | 4.44e-89 | 280 |
| Msa0810420 | AT3G28540.2 | 35.532 | 470 | 260 | 8 | 19 | 464 | 4 | 454 | 1.27e-88 | 280 |
| Msa0810420 | AT3G28540.1 | 35.532 | 470 | 260 | 8 | 19 | 464 | 4 | 454 | 1.58e-88 | 280 |
| Msa0810420 | AT5G40000.1 | 36.025 | 483 | 244 | 16 | 12 | 468 | 7 | 450 | 6.14e-88 | 277 |
| Msa0810420 | AT5G40010.1 | 36.709 | 474 | 256 | 8 | 13 | 463 | 8 | 460 | 1.86e-87 | 277 |
| Msa0810420 | AT5G57480.1 | 33.548 | 465 | 273 | 7 | 27 | 467 | 9 | 461 | 3.93e-86 | 274 |
| Msa0810420 | AT3G28600.2 | 45.886 | 316 | 147 | 7 | 165 | 467 | 103 | 407 | 1.13e-81 | 260 |
| Msa0810420 | AT4G30250.1 | 33.546 | 471 | 279 | 8 | 20 | 468 | 2 | 460 | 1.61e-81 | 262 |
| Msa0810420 | AT3G28520.1 | 44.073 | 329 | 163 | 5 | 155 | 466 | 117 | 441 | 1.68e-81 | 261 |
| Msa0810420 | AT4G30250.2 | 33.546 | 471 | 279 | 8 | 20 | 468 | 4 | 462 | 2.12e-81 | 262 |
| Msa0810420 | AT3G28580.2 | 34.937 | 478 | 245 | 12 | 5 | 463 | 3 | 433 | 2.10e-77 | 250 |
| Msa0810420 | AT5G17760.2 | 41.195 | 318 | 182 | 2 | 15 | 328 | 6 | 322 | 1.23e-75 | 241 |
| Msa0810420 | AT2G46620.1 | 32.684 | 462 | 232 | 14 | 25 | 467 | 15 | 416 | 4.68e-69 | 229 |
| Msa0810420 | AT3G29800.1 | 38.068 | 352 | 162 | 10 | 123 | 465 | 74 | 378 | 1.18e-60 | 205 |
| Msa0810420 | AT4G05340.1 | 55.844 | 77 | 32 | 1 | 344 | 420 | 19 | 93 | 7.98e-21 | 87.4 |
| Msa0810420 | AT5G43010.1 | 31.902 | 163 | 88 | 6 | 249 | 404 | 163 | 309 | 1.05e-11 | 67.0 |
| Msa0810420 | AT1G45000.1 | 31.902 | 163 | 88 | 6 | 249 | 404 | 163 | 309 | 1.52e-11 | 66.6 |
| Msa0810420 | AT3G28560.1 | 26.316 | 152 | 93 | 2 | 91 | 232 | 69 | 211 | 7.81e-11 | 63.2 |
Find 84 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTTCAAATTGATCAGTTT+TGG | 0.150920 | 5_3:-38834355 | Msa0810420:CDS |
| CTGGGTCTACTTTGTCCTTA+TGG | 0.184391 | 5_3:+38830964 | None:intergenic |
| TCAAAAGACTATGAAGAAAA+TGG | 0.215368 | 5_3:-38834083 | Msa0810420:CDS |
| TGAAGTGAAACTTGGTTATT+TGG | 0.217186 | 5_3:+38834371 | None:intergenic |
| TAGAAGTTTACTTAATTTAT+TGG | 0.221662 | 5_3:-38830345 | Msa0810420:three_prime_UTR |
| TTGATGATATCAAGCTTAAA+TGG | 0.279360 | 5_3:-38834181 | Msa0810420:CDS |
| CCAGACAAAGTAAACTTTCT+AGG | 0.283489 | 5_3:+38831056 | None:intergenic |
| ATTTCTATTATATTTCTATA+TGG | 0.287169 | 5_3:+38834651 | None:intergenic |
| TTTAGTAGGGATATACTCTT+TGG | 0.296287 | 5_3:+38834301 | None:intergenic |
| GTCTGGTCTGCTTAACTATA+TGG | 0.299508 | 5_3:-38831039 | Msa0810420:CDS |
| ACCAGACAAGTTTCCAGATA+TGG | 0.299840 | 5_3:-38833574 | Msa0810420:CDS |
| TGAACAAATTGAAGAGCTAT+TGG | 0.308188 | 5_3:-38830823 | Msa0810420:CDS |
| AAACGTGGTTACTTATTATA+TGG | 0.310407 | 5_3:-38833789 | Msa0810420:CDS |
| AAAACTACAATAACATAATA+AGG | 0.310725 | 5_3:+38830607 | None:intergenic |
| AAGAACTATGTTGTTATGTT+TGG | 0.317224 | 5_3:+38834238 | None:intergenic |
| CCTAGAAAGTTTACTTTGTC+TGG | 0.319922 | 5_3:-38831056 | Msa0810420:CDS |
| TATTCACTTGTCATTTCTTA+AGG | 0.331615 | 5_3:-38830910 | Msa0810420:CDS |
| GGCCAAAGCATTCAGAATCT+TGG | 0.339174 | 5_3:-38830889 | Msa0810420:CDS |
| GAAATTTGATGTGTATGATT+TGG | 0.345687 | 5_3:-38833715 | Msa0810420:CDS |
| AATCTTGGCTTCTAATTACT+TGG | 0.360580 | 5_3:-38830874 | Msa0810420:CDS |
| AAGATTCATTCTATGCAATC+TGG | 0.364238 | 5_3:-38833954 | Msa0810420:CDS |
| ATCAAAACCATCATCATTGT+TGG | 0.393123 | 5_3:+38834142 | None:intergenic |
| AGCCAAGATTCTGAATGCTT+TGG | 0.400001 | 5_3:+38830887 | None:intergenic |
| TCCATATCTGGAAACTTGTC+TGG | 0.403332 | 5_3:+38833573 | None:intergenic |
| CTTTGGCTGCATAGTAAAGA+TGG | 0.405145 | 5_3:+38834318 | None:intergenic |
| CGACCAGGGCGCAACAATGC+TGG | 0.407208 | 5_3:+38830945 | None:intergenic |
| TCTAATTACTTGGACATTGA+AGG | 0.408423 | 5_3:-38830864 | Msa0810420:CDS |
| TTCATTTGATTCACTTGCTA+TGG | 0.411884 | 5_3:-38833898 | Msa0810420:CDS |
| TGTTGTTTATGTGTGGATAA+TGG | 0.411949 | 5_3:+38834585 | None:intergenic |
| TCTTCTTCTTTCACAAACAT+TGG | 0.424150 | 5_3:-38834536 | Msa0810420:CDS |
| TTATATGGTCCACCAGGAAC+TGG | 0.430679 | 5_3:-38833774 | Msa0810420:CDS |
| TTTAAGGGATTTGTAAGTGT+TGG | 0.439054 | 5_3:+38834274 | None:intergenic |
| ACTTACAAATCCCTTAAAGT+TGG | 0.449216 | 5_3:-38834269 | Msa0810420:CDS |
| GTTAAATCACTTTGTTTCCA+TGG | 0.449328 | 5_3:+38833930 | None:intergenic |
| ATCTAGTCTTATTGCTGCTA+TGG | 0.454061 | 5_3:-38833748 | Msa0810420:CDS |
| AAGAGAAACGACCAACCATT+GGG | 0.454644 | 5_3:+38834555 | None:intergenic |
| CAAAAGACTATGAAGAAAAT+GGG | 0.454921 | 5_3:-38834082 | Msa0810420:CDS |
| GAAGATCCTGATGTTGCTCT+TGG | 0.466250 | 5_3:-38830750 | Msa0810420:CDS |
| GAAAATTCCAACAATGATGA+TGG | 0.483127 | 5_3:-38834149 | Msa0810420:CDS |
| GATCAATTTGAAGTGAAACT+TGG | 0.486219 | 5_3:+38834363 | None:intergenic |
| AGATACTCTGCCACTACAGC+AGG | 0.486605 | 5_3:+38830783 | None:intergenic |
| GATATTTACGACGAACCATA+AGG | 0.488719 | 5_3:-38830979 | Msa0810420:CDS |
| ACTTATGATGCTATAAAAGC+AGG | 0.490362 | 5_3:-38833990 | Msa0810420:CDS |
| GTGAAACTTGGTTATTTGGT+TGG | 0.495911 | 5_3:+38834375 | None:intergenic |
| TTAACTATATGGATGGTTTG+TGG | 0.503709 | 5_3:-38831028 | Msa0810420:CDS |
| ATTGTTGCGCCCTGGTCGTA+TGG | 0.508196 | 5_3:-38830940 | Msa0810420:CDS |
| AATGATATCTGAAATTGTAA+TGG | 0.510074 | 5_3:+38830452 | None:intergenic |
| GAAGAGAAACGACCAACCAT+TGG | 0.510972 | 5_3:+38834554 | None:intergenic |
| ACATTGGTTCAGCATCATCA+TGG | 0.528828 | 5_3:-38834520 | Msa0810420:CDS |
| GCAAGTGAATCAAATGAAGC+AGG | 0.530314 | 5_3:+38833903 | None:intergenic |
| AATAAGTAACCACGTTTCCA+AGG | 0.530569 | 5_3:+38833795 | None:intergenic |
| CTATAATTGATGATTTAGAT+CGG | 0.531151 | 5_3:-38833857 | Msa0810420:CDS |
| GACCCAGCATTGTTGCGCCC+TGG | 0.532969 | 5_3:-38830948 | Msa0810420:CDS |
| AATTTCAGATATCATTCAGT+AGG | 0.538203 | 5_3:-38830445 | Msa0810420:three_prime_UTR |
| AGATGTCACCCCTGCTGTAG+TGG | 0.539506 | 5_3:-38830793 | Msa0810420:CDS |
| GACCAGGGCGCAACAATGCT+GGG | 0.539616 | 5_3:+38830946 | None:intergenic |
| GAAGCATAGAGATAAAGTAA+TGG | 0.547256 | 5_3:-38834039 | Msa0810420:CDS |
| GGTCTGCTTAACTATATGGA+TGG | 0.549195 | 5_3:-38831035 | Msa0810420:CDS |
| AGTTCCCTCTAGTATTGTAA+AGG | 0.554385 | 5_3:-38830538 | Msa0810420:three_prime_UTR |
| GATGGTTTGTGGTCAAGTTG+TGG | 0.563526 | 5_3:-38831017 | Msa0810420:CDS |
| AGTGCTCCAAGAGCAACATC+AGG | 0.565349 | 5_3:+38830744 | None:intergenic |
| TCTATTAGATGTCTCTCTCA+TGG | 0.569550 | 5_3:+38833653 | None:intergenic |
| GGTCTCATGTTGTTTATGTG+TGG | 0.571783 | 5_3:+38834578 | None:intergenic |
| TCTTAAAAGCATCATGAATG+TGG | 0.575866 | 5_3:+38834475 | None:intergenic |
| AGACATTGATTGCAATTCAG+AGG | 0.577579 | 5_3:-38833613 | Msa0810420:CDS |
| ATATGCATGTCCATACGACC+AGG | 0.580884 | 5_3:+38830930 | None:intergenic |
| TCATAAGTGCTTAAAACATG+TGG | 0.584224 | 5_3:+38834005 | None:intergenic |
| TACTTATTATATGGTCCACC+AGG | 0.593809 | 5_3:-38833780 | Msa0810420:CDS |
| GTTGGCAAGCCTTGGAAACG+TGG | 0.596762 | 5_3:-38833804 | Msa0810420:CDS |
| TGATGGAAAACAAGTAGTGG+AGG | 0.599321 | 5_3:-38834210 | Msa0810420:CDS |
| ATGATATCAAGCTTAAATGG+AGG | 0.601584 | 5_3:-38834178 | Msa0810420:CDS |
| AGTATAAGGAATATAAGCAT+AGG | 0.601948 | 5_3:-38834106 | Msa0810420:CDS |
| ATTCTATGCAATCTGGACCA+TGG | 0.603360 | 5_3:-38833947 | Msa0810420:CDS |
| GATACTCTGCCACTACAGCA+GGG | 0.619261 | 5_3:+38830784 | None:intergenic |
| CATACCTTTACAATACTAGA+GGG | 0.632099 | 5_3:+38830534 | None:intergenic |
| GCATACCTTTACAATACTAG+AGG | 0.643016 | 5_3:+38830533 | None:intergenic |
| AGAGAAACGACCAACCATTG+GGG | 0.654195 | 5_3:+38834556 | None:intergenic |
| AGTAATTTGTCACACAACTG+AGG | 0.662002 | 5_3:+38830643 | None:intergenic |
| ATACTCTGCCACTACAGCAG+GGG | 0.676441 | 5_3:+38830785 | None:intergenic |
| AATTTGTCACACAACTGAGG+AGG | 0.686396 | 5_3:+38830646 | None:intergenic |
| TATGCATGTCCATACGACCA+GGG | 0.693400 | 5_3:+38830931 | None:intergenic |
| GAGAAACGACCAACCATTGG+GGG | 0.708121 | 5_3:+38834557 | None:intergenic |
| TTTGTGGTCAAGTTGTGGAG+AGG | 0.724193 | 5_3:-38831012 | Msa0810420:CDS |
| GACAAAGTAAACTTTCTAGG+CGG | 0.728578 | 5_3:+38831059 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTCTATTATATTTCTATA+TGG | + | chr5_3:38830404-38830423 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTACTTTTAC+GGG | - | chr5_3:38832008-38832027 | Msa0810420:intron | 10.0% |
| !! | TTATTCTATCAAATTATTAT+CGG | - | chr5_3:38832819-38832838 | Msa0810420:intron | 10.0% |
| !!! | ATGAAATTTCTAAGTTTTAA+GGG | + | chr5_3:38830624-38830643 | None:intergenic | 15.0% |
| !! | AAAAAGTTGTATAAAAAAGT+TGG | - | chr5_3:38831230-38831249 | Msa0810420:intron | 15.0% |
| !!! | TTTTTTTTTTAAACAAGCAA+TGG | - | chr5_3:38832149-38832168 | Msa0810420:intron | 15.0% |
| !!! | TTAATTTTAGTTTTTTGACA+CGG | + | chr5_3:38832243-38832262 | None:intergenic | 15.0% |
| !!! | AATTTGGTGTTATAAAAAAA+AGG | - | chr5_3:38832366-38832385 | Msa0810420:intron | 15.0% |
| !!! | AAAAAAAGGATTTTTAAGTT+TGG | - | chr5_3:38832380-38832399 | Msa0810420:intron | 15.0% |
| !!! | AAAAAAGGATTTTTAAGTTT+GGG | - | chr5_3:38832381-38832400 | Msa0810420:intron | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | - | chr5_3:38833488-38833507 | Msa0810420:intron | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | - | chr5_3:38833489-38833508 | Msa0810420:intron | 15.0% |
| !! | AAAGTGAAATATATTGTATT+GGG | - | chr5_3:38833513-38833532 | Msa0810420:intron | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | - | chr5_3:38833488-38833507 | Msa0810420:intron | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | - | chr5_3:38833489-38833508 | Msa0810420:intron | 15.0% |
| !! | AAAATGGAATATATTGTATT+GGG | - | chr5_3:38833625-38833644 | Msa0810420:CDS | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr5_3:38833665-38833684 | Msa0810420:CDS | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | chr5_3:38833666-38833685 | Msa0810420:CDS | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr5_3:38833665-38833684 | Msa0810420:CDS | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | chr5_3:38833666-38833685 | Msa0810420:CDS | 15.0% |
| !! | AAAACTACAATAACATAATA+AGG | + | chr5_3:38834448-38834467 | None:intergenic | 15.0% |
| !! | TAGAAGTTTACTTAATTTAT+TGG | - | chr5_3:38834707-38834726 | Msa0810420:five_prime_UTR | 15.0% |
| !! | ATGTTTATAAGATGAAAAAG+TGG | + | chr5_3:38830356-38830375 | None:intergenic | 20.0% |
| !!! | GATGAAATTTCTAAGTTTTA+AGG | + | chr5_3:38830625-38830644 | None:intergenic | 20.0% |
| !!! | TTATAGAGTTTTTTAGATCA+GGG | + | chr5_3:38831181-38831200 | None:intergenic | 20.0% |
| !!! | ATTATAGAGTTTTTTAGATC+AGG | + | chr5_3:38831182-38831201 | None:intergenic | 20.0% |
| !!! | CTATAATTGATGATTTAGAT+CGG | - | chr5_3:38831195-38831214 | Msa0810420:intron | 20.0% |
| !!! | TAACTGTTAAGAATTTTAAC+TGG | - | chr5_3:38831661-38831680 | Msa0810420:intron | 20.0% |
| !!! | TGTCTTATTTCTTACATTTA+CGG | - | chr5_3:38831690-38831709 | Msa0810420:intron | 20.0% |
| !!! | TGTTAGTTTATTAGATAGAT+AGG | - | chr5_3:38832104-38832123 | Msa0810420:intron | 20.0% |
| !!! | AAAAAAACTATTTCTATTGC+TGG | + | chr5_3:38832134-38832153 | None:intergenic | 20.0% |
| !! | CGGTTTAAATAATTTAGTTA+TGG | + | chr5_3:38832223-38832242 | None:intergenic | 20.0% |
| !! | ATAAATTATATGTTGATCGA+AGG | - | chr5_3:38832337-38832356 | Msa0810420:intron | 20.0% |
| !! | TTCAATGTAATCATATTTGT+TGG | + | chr5_3:38832794-38832813 | None:intergenic | 20.0% |
| !!! | ATAAACTTAATTTTTGACAG+TGG | + | chr5_3:38833332-38833351 | None:intergenic | 20.0% |
| !!! | AAAATGTAAGTCATTTTTAG+TGG | + | chr5_3:38833384-38833403 | None:intergenic | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | - | chr5_3:38833490-38833509 | Msa0810420:intron | 20.0% |
| !! | GAAAGTGAAATATATTGTAT+TGG | - | chr5_3:38833512-38833531 | Msa0810420:intron | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | - | chr5_3:38833490-38833509 | Msa0810420:intron | 20.0% |
| !! | GAAAATGGAATATATTGTAT+TGG | - | chr5_3:38833624-38833643 | Msa0810420:CDS | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | - | chr5_3:38833698-38833717 | Msa0810420:CDS | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | - | chr5_3:38833699-38833718 | Msa0810420:CDS | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+AGG | - | chr5_3:38833735-38833754 | Msa0810420:CDS | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+AGG | - | chr5_3:38833735-38833754 | Msa0810420:CDS | 20.0% |
| !!! | AATGATATCTGAAATTGTAA+TGG | + | chr5_3:38834603-38834622 | None:intergenic | 20.0% |
| !! | ACTTCAAATTGATCAGTTTT+GGG | - | chr5_3:38830698-38830717 | Msa0810420:CDS | 25.0% |
| !!! | AAGTGTTGGATATTTTAGTA+GGG | + | chr5_3:38830767-38830786 | None:intergenic | 25.0% |
| !!! | TAAGTGTTGGATATTTTAGT+AGG | + | chr5_3:38830768-38830787 | None:intergenic | 25.0% |
| !! | GGATATTTTTCCAACTTTAA+GGG | + | chr5_3:38830796-38830815 | None:intergenic | 25.0% |
| !! | TGGATATTTTTCCAACTTTA+AGG | + | chr5_3:38830797-38830816 | None:intergenic | 25.0% |
| ! | AAGAACTATGTTGTTATGTT+TGG | + | chr5_3:38830817-38830836 | None:intergenic | 25.0% |
| !! | TTGATGATATCAAGCTTAAA+TGG | - | chr5_3:38830871-38830890 | Msa0810420:CDS | 25.0% |
| !! | TATTCCTTATACTCCTTTTT+GGG | + | chr5_3:38830939-38830958 | None:intergenic | 25.0% |
| !! | ATATTCCTTATACTCCTTTT+TGG | + | chr5_3:38830940-38830959 | None:intergenic | 25.0% |
| ! | AGTATAAGGAATATAAGCAT+AGG | - | chr5_3:38830946-38830965 | Msa0810420:CDS | 25.0% |
| ! | TCAAAAGACTATGAAGAAAA+TGG | - | chr5_3:38830969-38830988 | Msa0810420:CDS | 25.0% |
| ! | CAAAAGACTATGAAGAAAAT+GGG | - | chr5_3:38830970-38830989 | Msa0810420:CDS | 25.0% |
| ! | AAACGTGGTTACTTATTATA+TGG | - | chr5_3:38831263-38831282 | Msa0810420:intron | 25.0% |
| ! | GAAATTTGATGTGTATGATT+TGG | - | chr5_3:38831337-38831356 | Msa0810420:intron | 25.0% |
| !!! | CAGATATGGATTTTTTAGAT+GGG | - | chr5_3:38831492-38831511 | Msa0810420:intron | 25.0% |
| !!! | CTCTTTTTTTAGTTTGAGTT+TGG | - | chr5_3:38831619-38831638 | Msa0810420:intron | 25.0% |
| ! | TTTGAAAGAGTAGAGAAAAA+GGG | - | chr5_3:38831777-38831796 | Msa0810420:intron | 25.0% |
| !!! | GTTTGTTGTTGTTGTTAAAT+TGG | - | chr5_3:38831968-38831987 | Msa0810420:intron | 25.0% |
| ! | GTAATAATTATGGAGCAAAA+TGG | - | chr5_3:38832073-38832092 | Msa0810420:intron | 25.0% |
| ! | TGATCGAAGGATTTATAATT+TGG | - | chr5_3:38832350-38832369 | Msa0810420:intron | 25.0% |
| !!! | ATTTTTAAGTTTGGGCATTT+TGG | - | chr5_3:38832389-38832408 | Msa0810420:intron | 25.0% |
| ! | AATAGGGTAGATTTAATTGA+TGG | + | chr5_3:38832481-38832500 | None:intergenic | 25.0% |
| !! | GTCAAAACTTTTAACAGTTA+TGG | + | chr5_3:38832603-38832622 | None:intergenic | 25.0% |
| !!! | TAACTGTTAAAAGTTTTGAC+TGG | - | chr5_3:38832603-38832622 | Msa0810420:intron | 25.0% |
| !!! | AACTGTTAAAAGTTTTGACT+GGG | - | chr5_3:38832604-38832623 | Msa0810420:intron | 25.0% |
| !!! | TATCTGGTTAGTCTAATTTA+GGG | + | chr5_3:38832725-38832744 | None:intergenic | 25.0% |
| !!! | ATATCTGGTTAGTCTAATTT+AGG | + | chr5_3:38832726-38832745 | None:intergenic | 25.0% |
| ! | TATGTTATTCTACTGATAAG+AGG | + | chr5_3:38833147-38833166 | None:intergenic | 25.0% |
| ! | TTTAGTGGTTAATAAAGTAC+TGG | + | chr5_3:38833369-38833388 | None:intergenic | 25.0% |
| ! | TGTATAAATAAAGGGGAAAA+TGG | - | chr5_3:38833609-38833628 | Msa0810420:CDS | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | - | chr5_3:38833832-38833851 | Msa0810420:CDS | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | - | chr5_3:38833833-38833852 | Msa0810420:CDS | 25.0% |
| !!! | ACTTGTTTTTCTTGAAATTG+TGG | - | chr5_3:38833950-38833969 | Msa0810420:CDS | 25.0% |
| !! | TATTCACTTGTCATTTCTTA+AGG | - | chr5_3:38834142-38834161 | Msa0810420:CDS | 25.0% |
| ! | AATTTCAGATATCATTCAGT+AGG | - | chr5_3:38834607-38834626 | Msa0810420:five_prime_UTR | 25.0% |
| ! | TGTTGTTTATGTGTGGATAA+TGG | + | chr5_3:38830470-38830489 | None:intergenic | 30.0% |
| TCTTCTTCTTTCACAAACAT+TGG | - | chr5_3:38830516-38830535 | Msa0810420:three_prime_UTR | 30.0% | |
| !! | TCTTAAAAGCATCATGAATG+TGG | + | chr5_3:38830580-38830599 | None:intergenic | 30.0% |
| TGAAGTGAAACTTGGTTATT+TGG | + | chr5_3:38830684-38830703 | None:intergenic | 30.0% | |
| ! | GATCAATTTGAAGTGAAACT+TGG | + | chr5_3:38830692-38830711 | None:intergenic | 30.0% |
| ! | CACTTCAAATTGATCAGTTT+TGG | - | chr5_3:38830697-38830716 | Msa0810420:CDS | 30.0% |
| TTTAGTAGGGATATACTCTT+TGG | + | chr5_3:38830754-38830773 | None:intergenic | 30.0% | |
| TTTAAGGGATTTGTAAGTGT+TGG | + | chr5_3:38830781-38830800 | None:intergenic | 30.0% | |
| ACTTACAAATCCCTTAAAGT+TGG | - | chr5_3:38830783-38830802 | Msa0810420:CDS | 30.0% | |
| !! | AACATAGTTCTTGCTTTTGA+TGG | - | chr5_3:38830825-38830844 | Msa0810420:CDS | 30.0% |
| ! | TTTTGATGGAAAACAAGTAG+TGG | - | chr5_3:38830839-38830858 | Msa0810420:CDS | 30.0% |
| ATGATATCAAGCTTAAATGG+AGG | - | chr5_3:38830874-38830893 | Msa0810420:CDS | 30.0% | |
| GAAAATTCCAACAATGATGA+TGG | - | chr5_3:38830903-38830922 | Msa0810420:CDS | 30.0% | |
| ATCAAAACCATCATCATTGT+TGG | + | chr5_3:38830913-38830932 | None:intergenic | 30.0% | |
| !!! | TGGTTTTGATAATCCCAAAA+AGG | - | chr5_3:38830923-38830942 | Msa0810420:CDS | 30.0% |
| ! | TAATCCCAAAAAGGAGTATA+AGG | - | chr5_3:38830932-38830951 | Msa0810420:CDS | 30.0% |
| GAAGCATAGAGATAAAGTAA+TGG | - | chr5_3:38831013-38831032 | Msa0810420:CDS | 30.0% | |
| TCATAAGTGCTTAAAACATG+TGG | + | chr5_3:38831050-38831069 | None:intergenic | 30.0% | |
| ACTTATGATGCTATAAAAGC+AGG | - | chr5_3:38831062-38831081 | Msa0810420:CDS | 30.0% | |
| AAGATTCATTCTATGCAATC+TGG | - | chr5_3:38831098-38831117 | Msa0810420:intron | 30.0% | |
| ! | GTTAAATCACTTTGTTTCCA+TGG | + | chr5_3:38831125-38831144 | None:intergenic | 30.0% |
| ! | TTCATTTGATTCACTTGCTA+TGG | - | chr5_3:38831154-38831173 | Msa0810420:intron | 30.0% |
| !! | ATGATTTAGATCGGTTTTTG+AGG | - | chr5_3:38831204-38831223 | Msa0810420:intron | 30.0% |
| CCATCTAAAAAATCCATATC+TGG | + | chr5_3:38831494-38831513 | None:intergenic | 30.0% | |
| !!! | CCAGATATGGATTTTTTAGA+TGG | - | chr5_3:38831491-38831510 | Msa0810420:intron | 30.0% |
| !!! | GGATTTTTTAGATGGGATTA+AGG | - | chr5_3:38831499-38831518 | Msa0810420:intron | 30.0% |
| GTTTGAAAGAGTAGAGAAAA+AGG | - | chr5_3:38831776-38831795 | Msa0810420:intron | 30.0% | |
| TTGAAAGAGTAGAGAAAAAG+GGG | - | chr5_3:38831778-38831797 | Msa0810420:intron | 30.0% | |
| AGGAGAAGAAAAATAGCTAT+GGG | + | chr5_3:38831827-38831846 | None:intergenic | 30.0% | |
| TGAGAAATAGGTGAGAAATA+GGG | + | chr5_3:38832497-38832516 | None:intergenic | 30.0% | |
| GAGAGAAATATGTGAGAAAT+AGG | + | chr5_3:38832509-38832528 | None:intergenic | 30.0% | |
| GAAGTTATGAAGAGAGAAAT+AGG | + | chr5_3:38832550-38832569 | None:intergenic | 30.0% | |
| AACAGTTATGGAGTAACTAA+GGG | + | chr5_3:38832591-38832610 | None:intergenic | 30.0% | |
| TAACAGTTATGGAGTAACTA+AGG | + | chr5_3:38832592-38832611 | None:intergenic | 30.0% | |
| !! | ATCTGGTTAGTCTAATTTAG+GGG | + | chr5_3:38832724-38832743 | None:intergenic | 30.0% |
| AAATGACAATGTGTATTGTG+TGG | - | chr5_3:38832955-38832974 | Msa0810420:intron | 30.0% | |
| !!! | TTTGTTTTGTTCAGGTCTAA+TGG | + | chr5_3:38833123-38833142 | None:intergenic | 30.0% |
| !!! | TAAGAGGATTTGTTTTGTTC+AGG | + | chr5_3:38833131-38833150 | None:intergenic | 30.0% |
| ATACTTTCAGCTTAACTTCT+TGG | + | chr5_3:38833261-38833280 | None:intergenic | 30.0% | |
| ! | GACTTACATTTTGCTAGTTA+AGG | - | chr5_3:38833392-38833411 | Msa0810420:intron | 30.0% |
| CAAAATAGGTCAATTATACC+GGG | + | chr5_3:38833565-38833584 | None:intergenic | 30.0% | |
| CCAAAATAGGTCAATTATAC+CGG | + | chr5_3:38833566-38833585 | None:intergenic | 30.0% | |
| TCTGTGTGAAAAACCAAAAT+AGG | + | chr5_3:38833579-38833598 | None:intergenic | 30.0% | |
| !!! | TTGAAATGGGTCAGTTTTTT+TGG | - | chr5_3:38833712-38833731 | Msa0810420:CDS | 30.0% |
| !!! | TGAAATGGGTCAGTTTTTTT+GGG | - | chr5_3:38833713-38833732 | Msa0810420:CDS | 30.0% |
| AGAAAATAGGTCAGTTATTC+CGG | - | chr5_3:38833748-38833767 | Msa0810420:CDS | 30.0% | |
| AGAAAATAGGTCAGTTATTC+CGG | - | chr5_3:38833748-38833767 | Msa0810420:CDS | 30.0% | |
| TCTTGAAATTGTGGAATAGA+TGG | - | chr5_3:38833959-38833978 | Msa0810420:CDS | 30.0% | |
| TTAACTATATGGATGGTTTG+TGG | - | chr5_3:38834024-38834043 | Msa0810420:CDS | 30.0% | |
| AATCTTGGCTTCTAATTACT+TGG | - | chr5_3:38834178-38834197 | Msa0810420:CDS | 30.0% | |
| TCTAATTACTTGGACATTGA+AGG | - | chr5_3:38834188-38834207 | Msa0810420:CDS | 30.0% | |
| TGAACAAATTGAAGAGCTAT+TGG | - | chr5_3:38834229-38834248 | Msa0810420:CDS | 30.0% | |
| CATACCTTTACAATACTAGA+GGG | + | chr5_3:38834521-38834540 | None:intergenic | 30.0% | |
| GTGAAACTTGGTTATTTGGT+TGG | + | chr5_3:38830680-38830699 | None:intergenic | 35.0% | |
| !!! | CAAATTGATCAGTTTTGGGA+TGG | - | chr5_3:38830702-38830721 | Msa0810420:CDS | 35.0% |
| !! | ATTTAGATCGGTTTTTGAGG+AGG | - | chr5_3:38831207-38831226 | Msa0810420:intron | 35.0% |
| ATAAAAAAGTTGGCAAGCCT+TGG | - | chr5_3:38831240-38831259 | Msa0810420:intron | 35.0% | |
| AATAAGTAACCACGTTTCCA+AGG | + | chr5_3:38831260-38831279 | None:intergenic | 35.0% | |
| TACTTATTATATGGTCCACC+AGG | - | chr5_3:38831272-38831291 | Msa0810420:intron | 35.0% | |
| !! | ATCTAGTCTTATTGCTGCTA+TGG | - | chr5_3:38831304-38831323 | Msa0810420:intron | 35.0% |
| TCTATTAGATGTCTCTCTCA+TGG | + | chr5_3:38831402-38831421 | None:intergenic | 35.0% | |
| ! | AGACATTGATTGCAATTCAG+AGG | - | chr5_3:38831439-38831458 | Msa0810420:intron | 35.0% |
| ! | TGAGTTTGGTTTCTTGAGTT+TGG | - | chr5_3:38831633-38831652 | Msa0810420:intron | 35.0% |
| GTTTGTTTGAAGAGAGATAG+AGG | - | chr5_3:38831716-38831735 | Msa0810420:intron | 35.0% | |
| GAGAGAGACCAAATATATGT+GGG | - | chr5_3:38831800-38831819 | Msa0810420:intron | 35.0% | |
| GGAGAAGAAAAATAGCTATG+GGG | + | chr5_3:38831826-38831845 | None:intergenic | 35.0% | |
| GAGGAGAAGAAAAATAGCTA+TGG | + | chr5_3:38831828-38831847 | None:intergenic | 35.0% | |
| AAAGTGGAAAAGCAAAAGAG+TGG | + | chr5_3:38831880-38831899 | None:intergenic | 35.0% | |
| CAAAGAAAGAAGGGTAAAAG+TGG | + | chr5_3:38831896-38831915 | None:intergenic | 35.0% | |
| AATACCAATTCAAGACAAGG+TGG | + | chr5_3:38831936-38831955 | None:intergenic | 35.0% | |
| AGCAATACCAATTCAAGACA+AGG | + | chr5_3:38831939-38831958 | None:intergenic | 35.0% | |
| TTGTCTTGAATTGGTATTGC+TGG | - | chr5_3:38831938-38831957 | Msa0810420:intron | 35.0% | |
| TGTCTTGAATTGGTATTGCT+GGG | - | chr5_3:38831939-38831958 | Msa0810420:intron | 35.0% | |
| GTGAGAAATAGGTGAGAAAT+AGG | + | chr5_3:38832498-38832517 | None:intergenic | 35.0% | |
| TAGACTAACCAGATATGAAG+TGG | - | chr5_3:38832730-38832749 | Msa0810420:intron | 35.0% | |
| TAACCAGATATGAAGTGGTT+AGG | - | chr5_3:38832735-38832754 | Msa0810420:intron | 35.0% | |
| ATTGTATCTATGTCGTGTCT+GGG | - | chr5_3:38832846-38832865 | Msa0810420:intron | 35.0% | |
| CATCCATGAGTATATTTGTG+TGG | + | chr5_3:38832916-38832935 | None:intergenic | 35.0% | |
| ! | ACACATTGTCATTTGCATCT+GGG | + | chr5_3:38832949-38832968 | None:intergenic | 35.0% |
| ! | TACACATTGTCATTTGCATC+TGG | + | chr5_3:38832950-38832969 | None:intergenic | 35.0% |
| ! | TTTTGTTCAGGTCTAATGGT+AGG | + | chr5_3:38833119-38833138 | None:intergenic | 35.0% |
| !! | CTTGATAAGACTAGTCTTGT+TGG | + | chr5_3:38833172-38833191 | None:intergenic | 35.0% |
| CAAAGTAGGTCAATTAAACC+GGG | + | chr5_3:38833453-38833472 | None:intergenic | 35.0% | |
| CCAAAGTAGGTCAATTAAAC+CGG | + | chr5_3:38833454-38833473 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | + | chr5_3:38833467-38833486 | None:intergenic | 35.0% | |
| ! | CCGGTATAATTGACCTATTT+TGG | - | chr5_3:38833563-38833582 | Msa0810420:CDS | 35.0% |
| GAAAATAGGTCAGTTATTCC+GGG | - | chr5_3:38833749-38833768 | Msa0810420:CDS | 35.0% | |
| GAAAATAGGTCAGTTATTCC+GGG | - | chr5_3:38833749-38833768 | Msa0810420:CDS | 35.0% | |
| GACAAAGTAAACTTTCTAGG+CGG | + | chr5_3:38833996-38834015 | None:intergenic | 35.0% | |
| CCAGACAAAGTAAACTTTCT+AGG | + | chr5_3:38833999-38834018 | None:intergenic | 35.0% | |
| CCTAGAAAGTTTACTTTGTC+TGG | - | chr5_3:38833996-38834015 | Msa0810420:CDS | 35.0% | |
| GATATTTACGACGAACCATA+AGG | - | chr5_3:38834073-38834092 | Msa0810420:CDS | 35.0% | |
| ! | AGTAATTTGTCACACAACTG+AGG | + | chr5_3:38834412-38834431 | None:intergenic | 35.0% |
| ! | GCAATGTTTGCTTCTTTTAC+AGG | + | chr5_3:38834493-38834512 | None:intergenic | 35.0% |
| AGTTCCCTCTAGTATTGTAA+AGG | - | chr5_3:38834514-38834533 | Msa0810420:CDS | 35.0% | |
| GCATACCTTTACAATACTAG+AGG | + | chr5_3:38834522-38834541 | None:intergenic | 35.0% | |
| ! | GGTCTCATGTTGTTTATGTG+TGG | + | chr5_3:38830477-38830496 | None:intergenic | 40.0% |
| AAGAGAAACGACCAACCATT+GGG | + | chr5_3:38830500-38830519 | None:intergenic | 40.0% | |
| !! | ACATTGGTTCAGCATCATCA+TGG | - | chr5_3:38830532-38830551 | Msa0810420:three_prime_UTR | 40.0% |
| CTTTGGCTGCATAGTAAAGA+TGG | + | chr5_3:38830737-38830756 | None:intergenic | 40.0% | |
| TGATGGAAAACAAGTAGTGG+AGG | - | chr5_3:38830842-38830861 | Msa0810420:CDS | 40.0% | |
| ATTCTATGCAATCTGGACCA+TGG | - | chr5_3:38831105-38831124 | Msa0810420:intron | 40.0% | |
| GCAAGTGAATCAAATGAAGC+AGG | + | chr5_3:38831152-38831171 | None:intergenic | 40.0% | |
| ! | AGACTAGATTTTCCAGTTCC+TGG | + | chr5_3:38831293-38831312 | None:intergenic | 40.0% |
| ACCAGACAAGTTTCCAGATA+TGG | - | chr5_3:38831478-38831497 | Msa0810420:intron | 40.0% | |
| TCCATATCTGGAAACTTGTC+TGG | + | chr5_3:38831482-38831501 | None:intergenic | 40.0% | |
| GGAGAGAGACCAAATATATG+TGG | - | chr5_3:38831799-38831818 | Msa0810420:intron | 40.0% | |
| TGCATTTCTTCGCTGTTTAG+AGG | + | chr5_3:38831847-38831866 | None:intergenic | 40.0% | |
| CACAGCTTGCAAAGAAAGAA+GGG | + | chr5_3:38831905-38831924 | None:intergenic | 40.0% | |
| TATGGAGCAAAATGGATAGC+AGG | - | chr5_3:38832081-38832100 | Msa0810420:intron | 40.0% | |
| ! | AACTAAGGGTGTGTTTGGTT+CGG | + | chr5_3:38832577-38832596 | None:intergenic | 40.0% |
| CATTGTATCTATGTCGTGTC+TGG | - | chr5_3:38832845-38832864 | Msa0810420:intron | 40.0% | |
| TCGTGTCTGGGAAAATACTT+GGG | - | chr5_3:38832858-38832877 | Msa0810420:intron | 40.0% | |
| TGTCACCGTGACATTAAATC+TGG | - | chr5_3:38832889-38832908 | Msa0810420:intron | 40.0% | |
| GTCACCGTGACATTAAATCT+GGG | - | chr5_3:38832890-38832909 | Msa0810420:intron | 40.0% | |
| GTGGCTCAGATTTAATGTCA+CGG | - | chr5_3:38832974-38832993 | Msa0810420:intron | 40.0% | |
| ! | CAATGGATTCGTTCAAACAG+TGG | + | chr5_3:38833061-38833080 | None:intergenic | 40.0% |
| CACTGTTTGAACGAATCCAT+TGG | - | chr5_3:38833059-38833078 | Msa0810420:intron | 40.0% | |
| !! | AATTGCTAGTTCTAGCAGAG+AGG | + | chr5_3:38833217-38833236 | None:intergenic | 40.0% |
| CCGGTTTAATTGACCTACTT+TGG | - | chr5_3:38833451-38833470 | Msa0810420:intron | 40.0% | |
| ATAGGTCAATTATACCGGGA+CGG | + | chr5_3:38833561-38833580 | None:intergenic | 40.0% | |
| GTCTGGTCTGCTTAACTATA+TGG | - | chr5_3:38834013-38834032 | Msa0810420:CDS | 40.0% | |
| GGTCTGCTTAACTATATGGA+TGG | - | chr5_3:38834017-38834036 | Msa0810420:CDS | 40.0% | |
| AGCCAAGATTCTGAATGCTT+TGG | + | chr5_3:38834168-38834187 | None:intergenic | 40.0% | |
| AATTTGTCACACAACTGAGG+AGG | + | chr5_3:38834409-38834428 | None:intergenic | 40.0% | |
| AAACAACATGAGACCCCCAA+TGG | - | chr5_3:38830482-38830501 | Msa0810420:three_prime_UTR | 45.0% | |
| AGAGAAACGACCAACCATTG+GGG | + | chr5_3:38830499-38830518 | None:intergenic | 45.0% | |
| GAAGAGAAACGACCAACCAT+TGG | + | chr5_3:38830501-38830520 | None:intergenic | 45.0% | |
| TTATATGGTCCACCAGGAAC+TGG | - | chr5_3:38831278-38831297 | Msa0810420:intron | 45.0% | |
| ! | CTAGATTTTCCAGTTCCTGG+TGG | + | chr5_3:38831290-38831309 | None:intergenic | 45.0% |
| GATAGAGGAGAGAGAGATAG+AGG | - | chr5_3:38831731-38831750 | Msa0810420:intron | 45.0% | |
| CTATGGGGCCCACATATATT+TGG | + | chr5_3:38831811-38831830 | None:intergenic | 45.0% | |
| GCACAGCTTGCAAAGAAAGA+AGG | + | chr5_3:38831906-38831925 | None:intergenic | 45.0% | |
| ! | GGAGTAACTAAGGGTGTGTT+TGG | + | chr5_3:38832582-38832601 | None:intergenic | 45.0% |
| ACGCCTAACCACTTCATATC+TGG | + | chr5_3:38832741-38832760 | None:intergenic | 45.0% | |
| GTCGTGTCTGGGAAAATACT+TGG | - | chr5_3:38832857-38832876 | Msa0810420:intron | 45.0% | |
| GTGGCCCAGATTTAATGTCA+CGG | + | chr5_3:38832897-38832916 | None:intergenic | 45.0% | |
| GGGCCACACAAATATACTCA+TGG | - | chr5_3:38832910-38832929 | Msa0810420:intron | 45.0% | |
| ACATACACTACCAGACACGA+CGG | + | chr5_3:38833025-38833044 | None:intergenic | 45.0% | |
| TTCAGGTCTAATGGTAGGTG+AGG | + | chr5_3:38833114-38833133 | None:intergenic | 45.0% | |
| GTAGGTCAATTAAACCGGGA+CGG | + | chr5_3:38833449-38833468 | None:intergenic | 45.0% | |
| ATAGGTCAGTTATTCCGGGA+CGG | - | chr5_3:38833753-38833772 | Msa0810420:CDS | 45.0% | |
| AAATAATACTCCCTCCGTCC+CGG | + | chr5_3:38833770-38833789 | None:intergenic | 45.0% | |
| ATAGGTCAGTTATTCCGGGA+CGG | - | chr5_3:38833753-38833772 | Msa0810420:CDS | 45.0% | |
| ! | GATGGTTTGTGGTCAAGTTG+TGG | - | chr5_3:38834035-38834054 | Msa0810420:CDS | 45.0% |
| ! | TTTGTGGTCAAGTTGTGGAG+AGG | - | chr5_3:38834040-38834059 | Msa0810420:CDS | 45.0% |
| CTGGGTCTACTTTGTCCTTA+TGG | + | chr5_3:38834091-38834110 | None:intergenic | 45.0% | |
| TATGCATGTCCATACGACCA+GGG | + | chr5_3:38834124-38834143 | None:intergenic | 45.0% | |
| ATATGCATGTCCATACGACC+AGG | + | chr5_3:38834125-38834144 | None:intergenic | 45.0% | |
| ! | GGCCAAAGCATTCAGAATCT+TGG | - | chr5_3:38834163-38834182 | Msa0810420:CDS | 45.0% |
| GAAGATCCTGATGTTGCTCT+TGG | - | chr5_3:38834302-38834321 | Msa0810420:CDS | 45.0% | |
| !!! | TTTTTTTTTTTTTACTTTTA+CGG | - | chr5_3:38832007-38832026 | Msa0810420:intron | 5.0% |
| !! | ATTAATTATAGTAATAATTA+TGG | - | chr5_3:38832063-38832082 | Msa0810420:intron | 5.0% |
| AACATGAGACCCCCAATGGT+TGG | - | chr5_3:38830486-38830505 | Msa0810420:three_prime_UTR | 50.0% | |
| GAGAAACGACCAACCATTGG+GGG | + | chr5_3:38830498-38830517 | None:intergenic | 50.0% | |
| CTGGCCACCTTGTCTTGAAT+TGG | - | chr5_3:38831929-38831948 | Msa0810420:intron | 50.0% | |
| GTCAATTAAACCGGGACGGA+GGG | + | chr5_3:38833445-38833464 | None:intergenic | 50.0% | |
| AAGTAGTACTACCTCCGTCC+CGG | - | chr5_3:38833544-38833563 | Msa0810420:intron | 50.0% | |
| ATACTCTGCCACTACAGCAG+GGG | + | chr5_3:38834270-38834289 | None:intergenic | 50.0% | |
| GATACTCTGCCACTACAGCA+GGG | + | chr5_3:38834271-38834290 | None:intergenic | 50.0% | |
| AGATACTCTGCCACTACAGC+AGG | + | chr5_3:38834272-38834291 | None:intergenic | 50.0% | |
| AGTGCTCCAAGAGCAACATC+AGG | + | chr5_3:38834311-38834330 | None:intergenic | 50.0% | |
| GTTGGCAAGCCTTGGAAACG+TGG | - | chr5_3:38831248-38831267 | Msa0810420:intron | 55.0% | |
| TCTTTGCAAGCTGTGCACGC+TGG | - | chr5_3:38831910-38831929 | Msa0810420:intron | 55.0% | |
| GAAGTGGTTAGGCGTGTCTC+AGG | - | chr5_3:38832746-38832765 | Msa0810420:intron | 55.0% | |
| AGACACGACGGACAGCACTT+GGG | + | chr5_3:38833013-38833032 | None:intergenic | 55.0% | |
| CCTCTTCGCACGCATTCCAA+TGG | + | chr5_3:38833078-38833097 | None:intergenic | 55.0% | |
| CCATTGGAATGCGTGCGAAG+AGG | - | chr5_3:38833075-38833094 | Msa0810420:intron | 55.0% | |
| TGGTAGGTGAGGCAGCAAGT+GGG | + | chr5_3:38833103-38833122 | None:intergenic | 55.0% | |
| ATGGTAGGTGAGGCAGCAAG+TGG | + | chr5_3:38833104-38833123 | None:intergenic | 55.0% | |
| AACTAGTACTCCCTCCGTCC+CGG | - | chr5_3:38833432-38833451 | Msa0810420:intron | 55.0% | |
| GGTCAATTAAACCGGGACGG+AGG | + | chr5_3:38833446-38833465 | None:intergenic | 55.0% | |
| GGTCAATTATACCGGGACGG+AGG | + | chr5_3:38833558-38833577 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | chr5_3:38833757-38833776 | Msa0810420:CDS | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | chr5_3:38833757-38833776 | Msa0810420:CDS | 55.0% | |
| AAGTAGTACTCCCTCCGTCC+CGG | + | chr5_3:38833890-38833909 | None:intergenic | 55.0% | |
| ATTGTTGCGCCCTGGTCGTA+TGG | - | chr5_3:38834112-38834131 | Msa0810420:CDS | 55.0% | |
| AGATGTCACCCCTGCTGTAG+TGG | - | chr5_3:38834259-38834278 | Msa0810420:CDS | 55.0% | |
| CAGACACGACGGACAGCACT+TGG | + | chr5_3:38833014-38833033 | None:intergenic | 60.0% | |
| ! | CAAGTGCTGTCCGTCGTGTC+TGG | - | chr5_3:38833012-38833031 | Msa0810420:intron | 60.0% |
| GGTCAGTTATTCCGGGACGG+AGG | - | chr5_3:38833756-38833775 | Msa0810420:CDS | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | - | chr5_3:38833756-38833775 | Msa0810420:CDS | 60.0% | |
| GACCAGGGCGCAACAATGCT+GGG | + | chr5_3:38834109-38834128 | None:intergenic | 60.0% | |
| GACCCAGCATTGTTGCGCCC+TGG | - | chr5_3:38834104-38834123 | Msa0810420:CDS | 65.0% | |
| CGACCAGGGCGCAACAATGC+TGG | + | chr5_3:38834110-38834129 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 38830328 | 38834746 | 38830328 | ID=Msa0810420;Name=Msa0810420 |
| chr5_3 | mRNA | 38830328 | 38834746 | 38830328 | ID=Msa0810420-mRNA-1;Parent=Msa0810420;Name=Msa0810420-mRNA-1;_AED=0.01;_eAED=0.01;_QI=161|1|1|1|1|1|2|343|485 |
| chr5_3 | exon | 38830328 | 38831096 | 38830328 | ID=Msa0810420-mRNA-1:exon:11802;Parent=Msa0810420-mRNA-1 |
| chr5_3 | exon | 38833554 | 38834746 | 38833554 | ID=Msa0810420-mRNA-1:exon:11801;Parent=Msa0810420-mRNA-1 |
| chr5_3 | five_prime_UTR | 38834586 | 38834746 | 38834586 | ID=Msa0810420-mRNA-1:five_prime_utr;Parent=Msa0810420-mRNA-1 |
| chr5_3 | CDS | 38833554 | 38834585 | 38833554 | ID=Msa0810420-mRNA-1:cds;Parent=Msa0810420-mRNA-1 |
| chr5_3 | CDS | 38830671 | 38831096 | 38830671 | ID=Msa0810420-mRNA-1:cds;Parent=Msa0810420-mRNA-1 |
| chr5_3 | three_prime_UTR | 38830328 | 38830670 | 38830328 | ID=Msa0810420-mRNA-1:three_prime_utr;Parent=Msa0810420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
