Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0250950 | XP_013464131.1 | 94.459 | 379 | 17 | 2 | 1 | 379 | 1 | 375 | 0.0 | 743 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0250950 | sp|O82497|DGP2_ARATH | 51.576 | 349 | 155 | 6 | 31 | 374 | 28 | 367 | 1.75e-114 | 341 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0250950 | A0A072V950 | 94.459 | 379 | 17 | 2 | 1 | 379 | 1 | 375 | 0.0 | 743 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015610 | Msa0250950 | 0.800732 | 1.255483e-48 | -8.615850e-47 |
| Msa0020930 | Msa0250950 | 0.830232 | 3.297218e-55 | -8.615850e-47 |
| Msa0026910 | Msa0250950 | 0.806335 | 8.649300e-50 | -8.615850e-47 |
| Msa0031340 | Msa0250950 | 0.805516 | 1.285580e-49 | -8.615850e-47 |
| Msa0032110 | Msa0250950 | 0.825884 | 3.675303e-54 | -8.615850e-47 |
| Msa0036140 | Msa0250950 | 0.817577 | 3.068902e-52 | -8.615850e-47 |
| Msa0045790 | Msa0250950 | 0.811194 | 7.907951e-51 | -8.615850e-47 |
| Msa0046160 | Msa0250950 | 0.811173 | 7.992950e-51 | -8.615850e-47 |
| Msa0068680 | Msa0250950 | 0.801635 | 8.204818e-49 | -8.615850e-47 |
| Msa0075360 | Msa0250950 | 0.817093 | 3.943085e-52 | -8.615850e-47 |
| Msa0084080 | Msa0250950 | 0.806156 | 9.433053e-50 | -8.615850e-47 |
| Msa0090100 | Msa0250950 | 0.807056 | 6.091194e-50 | -8.615850e-47 |
| Msa0095560 | Msa0250950 | 0.845935 | 2.976851e-59 | -8.615850e-47 |
| Msa0114060 | Msa0250950 | 0.830642 | 2.617575e-55 | -8.615850e-47 |
| Msa0125880 | Msa0250950 | 0.806544 | 7.814349e-50 | -8.615850e-47 |
| Msa0159930 | Msa0250950 | 0.836156 | 1.103898e-56 | -8.615850e-47 |
| Msa0170570 | Msa0250950 | 0.831526 | 1.587920e-55 | -8.615850e-47 |
| Msa0205850 | Msa0250950 | 0.802779 | 4.772409e-49 | -8.615850e-47 |
| Msa0210450 | Msa0250950 | 0.884694 | 1.540759e-71 | -8.615850e-47 |
| Msa0216240 | Msa0250950 | 0.814508 | 1.486407e-51 | -8.615850e-47 |
| Msa0220580 | Msa0250950 | 0.845220 | 4.650760e-59 | -8.615850e-47 |
| Msa0221060 | Msa0250950 | 0.818776 | 1.642998e-52 | -8.615850e-47 |
| Msa0223410 | Msa0250950 | -0.808876 | 2.497324e-50 | -8.615850e-47 |
| Msa0243710 | Msa0250950 | 0.808216 | 3.453343e-50 | -8.615850e-47 |
| Msa0244860 | Msa0250950 | 0.803427 | 3.504780e-49 | -8.615850e-47 |
| Msa0250950 | Msa0262520 | 0.812957 | 3.264193e-51 | -8.615850e-47 |
| Msa0250950 | Msa0276920 | 0.801236 | 9.902199e-49 | -8.615850e-47 |
| Msa0250950 | Msa0283450 | 0.802771 | 4.789917e-49 | -8.615850e-47 |
| Msa0250950 | Msa0287410 | 0.834813 | 2.412161e-56 | -8.615850e-47 |
| Msa0250950 | Msa0287650 | 0.808749 | 2.657362e-50 | -8.615850e-47 |
| Msa0250950 | Msa0294950 | 0.821299 | 4.346427e-53 | -8.615850e-47 |
| Msa0250950 | Msa0299730 | 0.802996 | 4.303872e-49 | -8.615850e-47 |
| Msa0250950 | Msa0306210 | -0.804253 | 2.360970e-49 | -8.615850e-47 |
| Msa0250950 | Msa0317730 | 0.826509 | 2.608731e-54 | -8.615850e-47 |
| Msa0250950 | Msa0326110 | 0.805858 | 1.089699e-49 | -8.615850e-47 |
| Msa0250950 | Msa0334360 | 0.823673 | 1.220175e-53 | -8.615850e-47 |
| Msa0250950 | Msa0338110 | 0.816143 | 6.436749e-52 | -8.615850e-47 |
| Msa0250950 | Msa0355220 | 0.809300 | 2.025188e-50 | -8.615850e-47 |
| Msa0250950 | Msa0373930 | 0.854707 | 1.029037e-61 | -8.615850e-47 |
| Msa0250950 | Msa0389340 | 0.800370 | 1.487873e-48 | -8.615850e-47 |
| Msa0250950 | Msa0402290 | 0.805475 | 1.311053e-49 | -8.615850e-47 |
| Msa0250950 | Msa0410650 | 0.812318 | 4.504028e-51 | -8.615850e-47 |
| Msa0250950 | Msa0436760 | 0.805495 | 1.298547e-49 | -8.615850e-47 |
| Msa0250950 | Msa0440750 | 0.804542 | 2.054559e-49 | -8.615850e-47 |
| Msa0250950 | Msa0464380 | 0.810138 | 1.337756e-50 | -8.615850e-47 |
| Msa0250950 | Msa0470690 | 0.836371 | 9.729567e-57 | -8.615850e-47 |
| Msa0250950 | Msa0479970 | 0.824677 | 7.091614e-54 | -8.615850e-47 |
| Msa0250950 | Msa0484720 | 0.815753 | 7.863812e-52 | -8.615850e-47 |
| Msa0250950 | Msa0484780 | 0.821433 | 4.048360e-53 | -8.615850e-47 |
| Msa0250950 | Msa0493630 | 0.814162 | 1.772756e-51 | -8.615850e-47 |
| Msa0250950 | Msa0502100 | 0.811365 | 7.261357e-51 | -8.615850e-47 |
| Msa0250950 | Msa0507680 | 0.814298 | 1.654803e-51 | -8.615850e-47 |
| Msa0250950 | Msa0521430 | 0.806846 | 6.746146e-50 | -8.615850e-47 |
| Msa0250950 | Msa0563840 | 0.820182 | 7.853112e-53 | -8.615850e-47 |
| Msa0250950 | Msa0577500 | 0.818837 | 1.591021e-52 | -8.615850e-47 |
| Msa0250950 | Msa0578860 | 0.817099 | 3.931153e-52 | -8.615850e-47 |
| Msa0250950 | Msa0608710 | 0.810057 | 1.392772e-50 | -8.615850e-47 |
| Msa0250950 | Msa0612960 | 0.803311 | 3.704364e-49 | -8.615850e-47 |
| Msa0250950 | Msa0616160 | 0.826449 | 2.696737e-54 | -8.615850e-47 |
| Msa0250950 | Msa0626090 | 0.802446 | 5.588839e-49 | -8.615850e-47 |
| Msa0250950 | Msa0627450 | 0.800423 | 1.451592e-48 | -8.615850e-47 |
| Msa0250950 | Msa0638070 | 0.804567 | 2.030725e-49 | -8.615850e-47 |
| Msa0250950 | Msa0662340 | 0.803685 | 3.098044e-49 | -8.615850e-47 |
| Msa0250950 | Msa0663240 | 0.817419 | 3.330062e-52 | -8.615850e-47 |
| Msa0250950 | Msa0688070 | 0.822475 | 2.322117e-53 | -8.615850e-47 |
| Msa0250950 | Msa0688480 | 0.827043 | 1.945609e-54 | -8.615850e-47 |
| Msa0250950 | Msa0689800 | 0.806559 | 7.754803e-50 | -8.615850e-47 |
| Msa0250950 | Msa0693380 | 0.817309 | 3.525653e-52 | -8.615850e-47 |
| Msa0250950 | Msa0740510 | 0.823827 | 1.123314e-53 | -8.615850e-47 |
| Msa0250950 | Msa0742390 | 0.812204 | 4.769562e-51 | -8.615850e-47 |
| Msa0250950 | Msa0799370 | 0.833916 | 4.052084e-56 | -8.615850e-47 |
| Msa0250950 | Msa0802010 | 0.827594 | 1.435029e-54 | -8.615850e-47 |
| Msa0250950 | Msa0816590 | 0.802098 | 6.589870e-49 | -8.615850e-47 |
| Msa0250950 | Msa0820770 | 0.831888 | 1.293066e-55 | -8.615850e-47 |
| Msa0250950 | Msa0827350 | -0.812896 | 3.365323e-51 | -8.615850e-47 |
| Msa0250950 | Msa0843780 | -0.810137 | 1.338592e-50 | -8.615850e-47 |
| Msa0250950 | Msa0845000 | 0.802960 | 4.377462e-49 | -8.615850e-47 |
| Msa0250950 | Msa0861090 | 0.826417 | 2.744551e-54 | -8.615850e-47 |
| Msa0250950 | Msa0862110 | 0.833021 | 6.775107e-56 | -8.615850e-47 |
| Msa0250950 | Msa0880950 | 0.812241 | 4.681350e-51 | -8.615850e-47 |
| Msa0250950 | Msa0895120 | 0.800130 | 1.664821e-48 | -8.615850e-47 |
| Msa0250950 | Msa0924310 | 0.813916 | 2.008943e-51 | -8.615850e-47 |
| Msa0250950 | Msa0933230 | 0.830759 | 2.451103e-55 | -8.615850e-47 |
| Msa0250950 | Msa0945970 | 0.805705 | 1.173381e-49 | -8.615850e-47 |
| Msa0250950 | Msa0954920 | 0.806274 | 8.908491e-50 | -8.615850e-47 |
| Msa0250950 | Msa0969450 | 0.808263 | 3.374928e-50 | -8.615850e-47 |
| Msa0250950 | Msa0969520 | 0.830329 | 3.122654e-55 | -8.615850e-47 |
| Msa0250950 | Msa0971090 | 0.802131 | 6.488506e-49 | -8.615850e-47 |
| Msa0250950 | Msa0993290 | 0.812212 | 4.749221e-51 | -8.615850e-47 |
| Msa0250950 | Msa0993600 | 0.806275 | 8.903978e-50 | -8.615850e-47 |
| Msa0250950 | Msa1035960 | 0.808834 | 2.549439e-50 | -8.615850e-47 |
| Msa0250950 | Msa1041730 | 0.809505 | 1.830277e-50 | -8.615850e-47 |
| Msa0250950 | Msa1043390 | 0.820240 | 7.613906e-53 | -8.615850e-47 |
| Msa0250950 | Msa1043450 | 0.821632 | 3.641598e-53 | -8.615850e-47 |
| Msa0250950 | Msa1043510 | 0.821368 | 4.191546e-53 | -8.615850e-47 |
| Msa0250950 | Msa1052830 | 0.807196 | 5.687380e-50 | -8.615850e-47 |
| Msa0250950 | Msa1082500 | 0.831093 | 2.029439e-55 | -8.615850e-47 |
| Msa0250950 | Msa1085200 | 0.822834 | 1.915938e-53 | -8.615850e-47 |
| Msa0250950 | Msa1102790 | 0.805594 | 1.237990e-49 | -8.615850e-47 |
| Msa0250950 | Msa1117170 | 0.817890 | 2.607508e-52 | -8.615850e-47 |
| Msa0250950 | Msa1125080 | 0.805704 | 1.173774e-49 | -8.615850e-47 |
| Msa0250950 | Msa1151720 | 0.808692 | 2.733934e-50 | -8.615850e-47 |
| Msa0250950 | Msa1167220 | 0.812435 | 4.245033e-51 | -8.615850e-47 |
| Msa0250950 | Msa1170410 | 0.802136 | 6.473042e-49 | -8.615850e-47 |
| Msa0250950 | Msa1172670 | 0.805791 | 1.125325e-49 | -8.615850e-47 |
| Msa0250950 | Msa1214890 | 0.811691 | 6.168066e-51 | -8.615850e-47 |
| Msa0250950 | Msa1224480 | 0.822861 | 1.888953e-53 | -8.615850e-47 |
| Msa0250950 | Msa1228590 | 0.803275 | 3.767896e-49 | -8.615850e-47 |
| Msa0250950 | Msa1233890 | 0.824725 | 6.910166e-54 | -8.615850e-47 |
| Msa0250950 | Msa1255330 | 0.841402 | 4.855465e-58 | -8.615850e-47 |
| Msa0250950 | Msa1291660 | 0.807971 | 3.895240e-50 | -8.615850e-47 |
| Msa0250950 | Msa1295950 | 0.812908 | 3.346134e-51 | -8.615850e-47 |
| Msa0250950 | Msa1296760 | 0.809810 | 1.574043e-50 | -8.615850e-47 |
| Msa0250950 | Msa1306840 | 0.819802 | 9.593661e-53 | -8.615850e-47 |
| Msa0250950 | Msa1318990 | 0.803023 | 4.248753e-49 | -8.615850e-47 |
| Msa0250950 | Msa1325860 | -0.811325 | 7.409393e-51 | -8.615850e-47 |
| Msa0250950 | Msa1329700 | 0.809869 | 1.529011e-50 | -8.615850e-47 |
| Msa0250950 | Msa1348890 | 0.807023 | 6.187492e-50 | -8.615850e-47 |
| Msa0250950 | Msa1353980 | 0.801095 | 1.058255e-48 | -8.615850e-47 |
| Msa0250950 | Msa1357530 | 0.825806 | 3.834793e-54 | -8.615850e-47 |
| Msa0250950 | Msa1359040 | 0.811584 | 6.507669e-51 | -8.615850e-47 |
| Msa0250950 | Msa1372760 | 0.802170 | 6.371513e-49 | -8.615850e-47 |
| Msa0250950 | Msa1374470 | 0.808682 | 2.747521e-50 | -8.615850e-47 |
| Msa0250950 | Msa1397860 | 0.807868 | 4.095791e-50 | -8.615850e-47 |
| Msa0250950 | Msa1398340 | 0.813765 | 2.168354e-51 | -8.615850e-47 |
| Msa0250950 | Msa1404300 | 0.812369 | 4.388590e-51 | -8.615850e-47 |
| Msa0250950 | Msa1409700 | 0.811815 | 5.796348e-51 | -8.615850e-47 |
| Msa0250950 | Msa1409870 | 0.801078 | 1.066742e-48 | -8.615850e-47 |
| Msa0250950 | Msa1411020 | 0.823181 | 1.590852e-53 | -8.615850e-47 |
| Msa0250950 | Msa1420290 | 0.804469 | 2.128571e-49 | -8.615850e-47 |
| Msa0250950 | Msa1420490 | 0.807966 | 3.904866e-50 | -8.615850e-47 |
| Msa0250950 | Msa1423390 | 0.813333 | 2.699531e-51 | -8.615850e-47 |
| Msa0250950 | Msa1424290 | 0.822422 | 2.389572e-53 | -8.615850e-47 |
| Msa0250950 | Msa1434350 | 0.828326 | 9.567077e-55 | -8.615850e-47 |
| Msa0250950 | Msa1436480 | 0.813522 | 2.453381e-51 | -8.615850e-47 |
| Msa0250950 | Msa1439320 | 0.826539 | 2.566686e-54 | -8.615850e-47 |
| Msa0250950 | Msa1440370 | 0.810462 | 1.138716e-50 | -8.615850e-47 |
| Msa0250950 | Msa1440810 | 0.812491 | 4.128300e-51 | -8.615850e-47 |
| Msa0250950 | Msa1444740 | 0.813678 | 2.266749e-51 | -8.615850e-47 |
| Msa0250950 | Msa1452240 | 0.805752 | 1.146781e-49 | -8.615850e-47 |
| Msa0250950 | Msa1460020 | 0.801959 | 7.040738e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0250950 | MtrunA17_Chr2g0308781 | 94.359 | 195 | 7 | 2 | 1 | 195 | 1 | 191 | 1.24e-132 | 377 |
| Msa0250950 | MtrunA17_Chr2g0308791 | 94.054 | 185 | 11 | 0 | 195 | 379 | 5 | 189 | 1.13e-129 | 369 |
| Msa0250950 | MtrunA17_Chr7g0257311 | 35.311 | 354 | 209 | 8 | 31 | 375 | 26 | 368 | 2.00e-59 | 196 |
| Msa0250950 | MtrunA17_Chr7g0259841 | 25.116 | 215 | 142 | 6 | 23 | 232 | 91 | 291 | 4.59e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0250950 | AT4G10650.1 | 51.576 | 349 | 155 | 6 | 31 | 374 | 28 | 367 | 1.78e-115 | 341 |
| Msa0250950 | AT2G41670.1 | 37.006 | 354 | 204 | 7 | 31 | 375 | 28 | 371 | 3.57e-70 | 225 |
| Msa0250950 | AT2G41670.2 | 39.004 | 241 | 135 | 4 | 142 | 375 | 20 | 255 | 7.68e-51 | 171 |
Find 93 sgRNAs with CRISPR-Local
Find 458 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGCGTCAGTGAATATTTC+TGG | 0.158942 | 2_2:-40063296 | None:intergenic |
| TTCTCGTTGTTCCGCTTTAA+AGG | 0.179691 | 2_2:+40057148 | Msa0250950:CDS |
| ACTGCAACAGTAATGTTAAT+TGG | 0.191179 | 2_2:+40059631 | Msa0250950:CDS |
| GCTCCTTTCACGAAACTAAA+TGG | 0.249115 | 2_2:-40056551 | None:intergenic |
| TTCCCACCTGCCGTTGTATA+AGG | 0.255573 | 2_2:-40059576 | None:intergenic |
| GCGTTATACGTGAAGGATTA+TGG | 0.272367 | 2_2:+40056958 | Msa0250950:CDS |
| TTATCTAAATTACTCTTAAC+AGG | 0.277356 | 2_2:+40060959 | Msa0250950:CDS |
| TGAATGGCAGCGACGCAATT+TGG | 0.281916 | 2_2:+40056885 | Msa0250950:exon |
| AAGAAAAGATTACATGAATA+TGG | 0.288939 | 2_2:-40056646 | None:intergenic |
| TAAAGACATTAGAAGTTATA+AGG | 0.302966 | 2_2:+40059904 | Msa0250950:CDS |
| GATGCTCATGCCGTGGTTGC+CGG | 0.326449 | 2_2:+40063214 | Msa0250950:CDS |
| TATCGTTATGCAGGAGCAAT+TGG | 0.349223 | 2_2:+40062278 | Msa0250950:intron |
| AGTGTCTAACACATAAATAT+TGG | 0.352105 | 2_2:-40060897 | None:intergenic |
| TATAAAATGTGAAGTTGAAA+TGG | 0.364357 | 2_2:+40063123 | Msa0250950:CDS |
| ACAGAGTGCTTGACTACATC+TGG | 0.370782 | 2_2:+40062428 | Msa0250950:CDS |
| TTAGATAAAACATCAACATT+AGG | 0.372594 | 2_2:-40060944 | None:intergenic |
| TAGTCAGTTTACCGCGTTGC+AGG | 0.375498 | 2_2:+40063159 | Msa0250950:CDS |
| AAGGAAAAGGAAGGAAGAAA+TGG | 0.384227 | 2_2:-40056793 | None:intergenic |
| GATACCTGTGTGTGATCGTT+AGG | 0.386084 | 2_2:-40062479 | None:intergenic |
| CTGCAACAGTAATGTTAATT+GGG | 0.393514 | 2_2:+40059632 | Msa0250950:CDS |
| CATTGCACAAAGAATCCCTT+TGG | 0.402759 | 2_2:+40057013 | Msa0250950:CDS |
| TCTTTAGTCTCCCCTGGCTC+TGG | 0.404503 | 2_2:-40059887 | None:intergenic |
| ATTATGGAACGATCCTTTCA+TGG | 0.411084 | 2_2:+40056974 | Msa0250950:CDS |
| GCTTCCAAATGTTGGAAAAT+CGG | 0.424911 | 2_2:+40059654 | Msa0250950:CDS |
| GTGTCTAACACATAAATATT+GGG | 0.426667 | 2_2:-40060896 | None:intergenic |
| ATCGTTATGCAGGAGCAATT+GGG | 0.434008 | 2_2:+40062279 | Msa0250950:intron |
| AATATGGAGCTATATAGTTC+AGG | 0.435413 | 2_2:-40056630 | None:intergenic |
| AGGAGCAATTGGGGACTGTT+TGG | 0.446243 | 2_2:+40062289 | Msa0250950:intron |
| ATGCTCATGCCGTGGTTGCC+GGG | 0.447202 | 2_2:+40063215 | Msa0250950:CDS |
| CTAATGCCTTGCATCATGTT+GGG | 0.465694 | 2_2:+40059683 | Msa0250950:CDS |
| ACATCAACATTAGGAACCTC+TGG | 0.466966 | 2_2:-40060935 | None:intergenic |
| CTAATGTCTTTAGTCTCCCC+TGG | 0.467223 | 2_2:-40059893 | None:intergenic |
| AAAGACAGCGTTAATTTGAA+TGG | 0.470032 | 2_2:+40056869 | Msa0250950:exon |
| TTAATTGGGCTTCCAAATGT+TGG | 0.471128 | 2_2:+40059646 | Msa0250950:CDS |
| GAAAGAGTATTGAGAGGAGT+GGG | 0.480344 | 2_2:-40056771 | None:intergenic |
| CTTCACGTTCAGTTGAAACA+TGG | 0.482793 | 2_2:-40063189 | None:intergenic |
| ACTAATGCCTTGCATCATGT+TGG | 0.483339 | 2_2:+40059682 | Msa0250950:CDS |
| ACCTCTGGAGGTAAAACAGC+TGG | 0.484749 | 2_2:-40060920 | None:intergenic |
| TGAAAGAAAGAATAGAAAGA+AGG | 0.488362 | 2_2:+40056928 | Msa0250950:CDS |
| CTGCGTCAGTGAATATTTCT+GGG | 0.488426 | 2_2:-40063295 | None:intergenic |
| GGAAAGAGTATTGAGAGGAG+TGG | 0.488998 | 2_2:-40056772 | None:intergenic |
| GCAACTGTGAGTCCAGAGCC+AGG | 0.490428 | 2_2:+40059875 | Msa0250950:CDS |
| CCTGCCGTTGTATAAGGCTT+AGG | 0.502297 | 2_2:-40059570 | None:intergenic |
| GTTGGGAGAATTAGTGCTGC+AGG | 0.519473 | 2_2:+40059700 | Msa0250950:CDS |
| TTAAAAGTTCTCGTAGGACT+CGG | 0.520213 | 2_2:-40063520 | None:intergenic |
| AAATGACATTGAGAGGAGAA+TGG | 0.521380 | 2_2:-40057071 | None:intergenic |
| AAAAGTTACACACAATGCAT+TGG | 0.531960 | 2_2:-40063319 | None:intergenic |
| ACGCAATTTGGAAGGCGAGT+TGG | 0.534251 | 2_2:+40056897 | Msa0250950:CDS |
| CGAGTAGAAGCAACCATGAA+AGG | 0.538388 | 2_2:-40056987 | None:intergenic |
| CCTAAGCCTTATACAACGGC+AGG | 0.539543 | 2_2:+40059570 | Msa0250950:CDS |
| ATTCTGTAACCAGGCATGGA+TGG | 0.542119 | 2_2:+40059008 | Msa0250950:intron |
| CAAAGGGATTCTTTGTGCAA+TGG | 0.550224 | 2_2:-40057012 | None:intergenic |
| ACTCCATTTAGTTTCGTGAA+AGG | 0.552364 | 2_2:+40056548 | Msa0250950:five_prime_UTR |
| ATACCTGTGTGTGATCGTTA+GGG | 0.555887 | 2_2:-40062478 | None:intergenic |
| TATAGTTCAGGTGCGGTGGT+TGG | 0.558055 | 2_2:-40056618 | None:intergenic |
| GAAACGAACTGCGTATCTTG+TGG | 0.560530 | 2_2:+40059042 | Msa0250950:CDS |
| GAATCCTTGCATCAGTGACA+TGG | 0.567498 | 2_2:-40057049 | None:intergenic |
| AAGCCTTATACAACGGCAGG+TGG | 0.568005 | 2_2:+40059573 | Msa0250950:CDS |
| TAACAAGGAGAGCATCAGAC+AGG | 0.569310 | 2_2:+40059077 | Msa0250950:CDS |
| GTCAGTGAATATTTCTGGGA+AGG | 0.575803 | 2_2:-40063291 | None:intergenic |
| GAAATGGAAAGAGTATTGAG+AGG | 0.576964 | 2_2:-40056777 | None:intergenic |
| TCGTTATGCAGGAGCAATTG+GGG | 0.580997 | 2_2:+40062280 | Msa0250950:intron |
| TGGCAGCGACGCAATTTGGA+AGG | 0.584150 | 2_2:+40056889 | Msa0250950:CDS |
| CAACTGTGAGTCCAGAGCCA+GGG | 0.588594 | 2_2:+40059876 | Msa0250950:CDS |
| GCTATATAGTTCAGGTGCGG+TGG | 0.589018 | 2_2:-40056622 | None:intergenic |
| ACCGAACCTTACCTTTAAAG+CGG | 0.591723 | 2_2:-40057159 | None:intergenic |
| ATGGGAAAAGTTATCGAGCA+AGG | 0.597215 | 2_2:+40062376 | Msa0250950:CDS |
| TTTGCAGGACAACATGGTGC+AGG | 0.600781 | 2_2:+40063054 | Msa0250950:intron |
| TCGTCCATGTCACTGATGCA+AGG | 0.606212 | 2_2:+40057045 | Msa0250950:CDS |
| GGACGATGAGATCAACCAAA+GGG | 0.606711 | 2_2:-40057028 | None:intergenic |
| AACGGCAGGTGGGAAAGTTG+AGG | 0.607256 | 2_2:+40059584 | Msa0250950:CDS |
| CAGAGTGCTTGACTACATCT+GGG | 0.608348 | 2_2:+40062429 | Msa0250950:CDS |
| ACGAAACTAAATGGAGTGCG+AGG | 0.616048 | 2_2:-40056542 | None:intergenic |
| AACTGTGAGTCCAGAGCCAG+GGG | 0.618379 | 2_2:+40059877 | Msa0250950:CDS |
| CTAACACATAAATATTGGGA+TGG | 0.619435 | 2_2:-40060892 | None:intergenic |
| AAAAGCAGCGTTATACGTGA+AGG | 0.625766 | 2_2:+40056951 | Msa0250950:CDS |
| TCAGCCTTAAAAGTTCTCGT+AGG | 0.628275 | 2_2:-40063526 | None:intergenic |
| TGGAGTCGATGCTCATAACA+AGG | 0.628893 | 2_2:+40059062 | Msa0250950:CDS |
| TGTGAGTAAATGACATTGAG+AGG | 0.630009 | 2_2:-40057078 | None:intergenic |
| AATTCTCCCAACATGATGCA+AGG | 0.637021 | 2_2:-40059689 | None:intergenic |
| AAGCAATTTCCCGGCAACCA+CGG | 0.637141 | 2_2:-40063224 | None:intergenic |
| CCAGAAATATTCACTGACGC+AGG | 0.640418 | 2_2:+40063296 | Msa0250950:exon |
| AGTTCCTAAGCCTTATACAA+CGG | 0.641054 | 2_2:+40059566 | Msa0250950:intron |
| TGGCAATGATTGAGCGACGG+AGG | 0.648453 | 2_2:-40056598 | None:intergenic |
| TGGACGATGAGATCAACCAA+AGG | 0.651630 | 2_2:-40057029 | None:intergenic |
| GGTTGGCAATGATTGAGCGA+CGG | 0.669554 | 2_2:-40056601 | None:intergenic |
| CGGAGGACGAAAGTGATCGA+CGG | 0.677734 | 2_2:-40056581 | None:intergenic |
| AGCCTTATACAACGGCAGGT+GGG | 0.691519 | 2_2:+40059574 | Msa0250950:CDS |
| TCAACATTAGGAACCTCTGG+AGG | 0.695840 | 2_2:-40060932 | None:intergenic |
| AATCCCTAACGATCACACAC+AGG | 0.703906 | 2_2:+40062475 | Msa0250950:CDS |
| GGAGCTATATAGTTCAGGTG+CGG | 0.719128 | 2_2:-40056625 | None:intergenic |
| ATGGAAAACTTCCTGCAACG+CGG | 0.727721 | 2_2:-40063170 | None:intergenic |
| TGAAGAAGATGCTCATGCCG+TGG | 0.731208 | 2_2:+40063207 | Msa0250950:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAAAA+AGG | + | chr2_2:40060613-40060632 | Msa0250950:intron | 0.0% |
| !!! | TACAAAAATGTAAAAAATTT+TGG | - | chr2_2:40057432-40057451 | None:intergenic | 10.0% |
| !!! | AAATTTTTTACATTTTTGTA+TGG | + | chr2_2:40057432-40057451 | Msa0250950:intron | 10.0% |
| !!! | AATATGATTTTTATATTTTG+GGG | + | chr2_2:40057577-40057596 | Msa0250950:intron | 10.0% |
| !! | AAAAATAGTATTATAATGAT+GGG | + | chr2_2:40059371-40059390 | Msa0250950:intron | 10.0% |
| !!! | AACATTTTTTAATCTAATAA+AGG | + | chr2_2:40062660-40062679 | Msa0250950:intron | 10.0% |
| !!! | TAAGAATATATTTTTTTGAA+CGG | - | chr2_2:40063476-40063495 | None:intergenic | 10.0% |
| !!! | TTTTGTAATACAAATTTTTC+TGG | - | chr2_2:40056734-40056753 | None:intergenic | 15.0% |
| !!! | ATTTAAACATTATTTTTGTG+TGG | + | chr2_2:40058434-40058453 | Msa0250950:intron | 15.0% |
| !!! | TTTAAACATTATTTTTGTGT+GGG | + | chr2_2:40058435-40058454 | Msa0250950:intron | 15.0% |
| !! | CAAAAATAGTATTATAATGA+TGG | + | chr2_2:40059370-40059389 | Msa0250950:intron | 15.0% |
| !! | AAAATAGTATTATAATGATG+GGG | + | chr2_2:40059372-40059391 | Msa0250950:intron | 15.0% |
| !!! | TTTTTACAATCTCATTTATT+TGG | + | chr2_2:40060132-40060151 | Msa0250950:intron | 15.0% |
| !!! | TCAACATAATAATTTTACTT+TGG | + | chr2_2:40060200-40060219 | Msa0250950:intron | 15.0% |
| !!! | CAACATAATAATTTTACTTT+GGG | + | chr2_2:40060201-40060220 | Msa0250950:intron | 15.0% |
| !!! | GTAAGATATTTTTGTTATTA+GGG | + | chr2_2:40060316-40060335 | Msa0250950:intron | 15.0% |
| !!! | TAAGATATTTTTGTTATTAG+GGG | + | chr2_2:40060317-40060336 | Msa0250950:intron | 15.0% |
| !! | TTTATTCTTTATATACATAG+AGG | - | chr2_2:40060596-40060615 | None:intergenic | 15.0% |
| !! | TATGTTATCTATTAATTTCA+TGG | - | chr2_2:40061226-40061245 | None:intergenic | 15.0% |
| !!! | TAAATTGTTTAACTCTTTTT+TGG | + | chr2_2:40063360-40063379 | Msa0250950:three_prime_UTR | 15.0% |
| !!! | AACTATTAAGATTGTTTTTA+TGG | - | chr2_2:40063448-40063467 | None:intergenic | 15.0% |
| !! | AAGAAAAGATTACATGAATA+TGG | - | chr2_2:40056649-40056668 | None:intergenic | 20.0% |
| !!! | AAAAAATAGTTTGAGTTTTG+AGG | - | chr2_2:40056838-40056857 | None:intergenic | 20.0% |
| !!! | GATGAATATAAGTTGAAAAT+AGG | - | chr2_2:40057305-40057324 | None:intergenic | 20.0% |
| !! | TAACTAATAACTAACTTAAC+TGG | + | chr2_2:40057704-40057723 | Msa0250950:intron | 20.0% |
| !! | AACTTCAAACTCAAAATTAT+TGG | - | chr2_2:40057911-40057930 | None:intergenic | 20.0% |
| !! | GAATTTGATCTGTAAAATAT+GGG | + | chr2_2:40058693-40058712 | Msa0250950:intron | 20.0% |
| !!! | TGTCATTTCAAATTATACAT+TGG | + | chr2_2:40059183-40059202 | Msa0250950:intron | 20.0% |
| !! | TTCAAATTATACATTGGAAA+AGG | + | chr2_2:40059189-40059208 | Msa0250950:intron | 20.0% |
| !!! | GAAATACAATTGAAATTTTG+TGG | - | chr2_2:40059804-40059823 | None:intergenic | 20.0% |
| !!! | AACTTTTGTTTTGTAGAAAA+AGG | + | chr2_2:40059839-40059858 | Msa0250950:intron | 20.0% |
| !! | TAAAGACATTAGAAGTTATA+AGG | + | chr2_2:40059904-40059923 | Msa0250950:CDS | 20.0% |
| !! | TGACAGAAAAATTATAGAAT+TGG | - | chr2_2:40060026-40060045 | None:intergenic | 20.0% |
| !!! | ATAATAATTTTACTTTGGGA+AGG | + | chr2_2:40060205-40060224 | Msa0250950:intron | 20.0% |
| !!! | GGTAAGATATTTTTGTTATT+AGG | + | chr2_2:40060315-40060334 | Msa0250950:intron | 20.0% |
| !!! | TGTATATTACATACTTTTTG+TGG | + | chr2_2:40060747-40060766 | Msa0250950:intron | 20.0% |
| !!! | GTATATTACATACTTTTTGT+GGG | + | chr2_2:40060748-40060767 | Msa0250950:intron | 20.0% |
| !! | TTAGATAAAACATCAACATT+AGG | - | chr2_2:40060947-40060966 | None:intergenic | 20.0% |
| !! | TTATCTAAATTACTCTTAAC+AGG | + | chr2_2:40060959-40060978 | Msa0250950:CDS | 20.0% |
| !!! | TCTTAACAGGTATTTTTAAT+TGG | + | chr2_2:40060972-40060991 | Msa0250950:intron | 20.0% |
| !!! | AAGAAATGAGAAGAAAATTT+TGG | + | chr2_2:40061265-40061284 | Msa0250950:intron | 20.0% |
| !!! | GAAAATTTTGGTTAATCAAT+AGG | + | chr2_2:40061277-40061296 | Msa0250950:intron | 20.0% |
| !! | AAGAATTGAATCAAAACAAA+TGG | + | chr2_2:40062615-40062634 | Msa0250950:intron | 20.0% |
| !!! | ATTTGCATTTCATTTAAAGT+TGG | + | chr2_2:40062704-40062723 | Msa0250950:intron | 20.0% |
| !! | TATAAAATGTGAAGTTGAAA+TGG | + | chr2_2:40063123-40063142 | Msa0250950:CDS | 20.0% |
| !! | ATTCATGTAATCTTTTCTTC+AGG | + | chr2_2:40056650-40056669 | Msa0250950:five_prime_UTR | 25.0% |
| !! | TTCATGTAATCTTTTCTTCA+GGG | + | chr2_2:40056651-40056670 | Msa0250950:five_prime_UTR | 25.0% |
| ! | ACTAAAAAATTGTAGGAAAG+AGG | - | chr2_2:40056711-40056730 | None:intergenic | 25.0% |
| ! | TTTCTGGACTAAAAAATTGT+AGG | - | chr2_2:40056718-40056737 | None:intergenic | 25.0% |
| ! | TTATAGAAAAAGGAAAAGGA+AGG | - | chr2_2:40056805-40056824 | None:intergenic | 25.0% |
| ! | TGAAAGAAAGAATAGAAAGA+AGG | + | chr2_2:40056928-40056947 | Msa0250950:CDS | 25.0% |
| ! | GAAAATGCAAATATTGCTTA+TGG | + | chr2_2:40057349-40057368 | Msa0250950:intron | 25.0% |
| ! | CAATTTAATTAAGCGCTTAT+AGG | - | chr2_2:40057375-40057394 | None:intergenic | 25.0% |
| ! | TTGCATATACCAAATCTTAA+GGG | - | chr2_2:40057542-40057561 | None:intergenic | 25.0% |
| ! | GAGATTTGAAGAATTATTTG+GGG | - | chr2_2:40057889-40057908 | None:intergenic | 25.0% |
| ! | GGAGATTTGAAGAATTATTT+GGG | - | chr2_2:40057890-40057909 | None:intergenic | 25.0% |
| ! | TGGAGATTTGAAGAATTATT+TGG | - | chr2_2:40057891-40057910 | None:intergenic | 25.0% |
| ! | ACATAAGACGATATGTAAAT+TGG | + | chr2_2:40057939-40057958 | Msa0250950:intron | 25.0% |
| ! | CATAAGACGATATGTAAATT+GGG | + | chr2_2:40057940-40057959 | Msa0250950:intron | 25.0% |
| ! | TTTGAAAATACTGCTTAGAT+AGG | - | chr2_2:40058014-40058033 | None:intergenic | 25.0% |
| ! | TATTGAACAAATCCTTGTAA+AGG | - | chr2_2:40058229-40058248 | None:intergenic | 25.0% |
| !!! | CTTCTTCTTCTTTAAAATGA+TGG | - | chr2_2:40058589-40058608 | None:intergenic | 25.0% |
| ! | GGAATTTGATCTGTAAAATA+TGG | + | chr2_2:40058692-40058711 | Msa0250950:intron | 25.0% |
| ! | TGAAATTTGATGGAAAAAGT+TGG | + | chr2_2:40058759-40058778 | Msa0250950:intron | 25.0% |
| ! | GAAATTTGATGGAAAAAGTT+GGG | + | chr2_2:40058760-40058779 | Msa0250950:intron | 25.0% |
| ! | AATGGTTAATTAGTTGAGTT+TGG | - | chr2_2:40058917-40058936 | None:intergenic | 25.0% |
| !!! | AATTAACCATTTTTTACCAC+AGG | + | chr2_2:40058926-40058945 | Msa0250950:intron | 25.0% |
| ! | ATAACAATTATTCTGTAACC+AGG | + | chr2_2:40058999-40059018 | Msa0250950:intron | 25.0% |
| ! | ACGATCTTATCAAAATATCA+TGG | + | chr2_2:40059151-40059170 | Msa0250950:intron | 25.0% |
| ! | TATCAAAATATCATGGTGTT+TGG | + | chr2_2:40059158-40059177 | Msa0250950:intron | 25.0% |
| !!! | TTAGTTGTTGCTATTCTTTT+TGG | + | chr2_2:40059472-40059491 | Msa0250950:intron | 25.0% |
| ! | AAAAAGAGAAGAATGATGAA+AGG | - | chr2_2:40060116-40060135 | None:intergenic | 25.0% |
| ! | TATGAAAAATGCTCAAAACT+AGG | + | chr2_2:40060357-40060376 | Msa0250950:intron | 25.0% |
| ! | ATGAAAAATGCTCAAAACTA+GGG | + | chr2_2:40060358-40060377 | Msa0250950:intron | 25.0% |
| !! | ATTCGTTCAGTTTTTGTATT+TGG | - | chr2_2:40060410-40060429 | None:intergenic | 25.0% |
| ! | CTATGAAAAACATAATATCC+TGG | - | chr2_2:40060485-40060504 | None:intergenic | 25.0% |
| ! | CAATGATAAATTGATGAAGT+TGG | - | chr2_2:40060512-40060531 | None:intergenic | 25.0% |
| !! | AAAGGAAAAAACTTTTGACA+CGG | + | chr2_2:40060634-40060653 | Msa0250950:intron | 25.0% |
| ! | AATAAGATGACTTTCATTGT+TGG | + | chr2_2:40060671-40060690 | Msa0250950:intron | 25.0% |
| ! | GTGTCTAACACATAAATATT+GGG | - | chr2_2:40060899-40060918 | None:intergenic | 25.0% |
| ! | AGTGTCTAACACATAAATAT+TGG | - | chr2_2:40060900-40060919 | None:intergenic | 25.0% |
| ! | TTTACATTCTTAGTTAGTAG+TGG | + | chr2_2:40061017-40061036 | Msa0250950:intron | 25.0% |
| ! | ACTGTCATTAAATTCATGTT+TGG | + | chr2_2:40061369-40061388 | Msa0250950:intron | 25.0% |
| ! | CTGTCATTAAATTCATGTTT+GGG | + | chr2_2:40061370-40061389 | Msa0250950:intron | 25.0% |
| !! | TAGACTTTATGTTGATTGAA+AGG | - | chr2_2:40061564-40061583 | None:intergenic | 25.0% |
| ! | ATAGTTGTCATTCAAATCTA+TGG | - | chr2_2:40061660-40061679 | None:intergenic | 25.0% |
| ! | GAGTATATACTTGAAATAGT+TGG | - | chr2_2:40062018-40062037 | None:intergenic | 25.0% |
| ! | TAGTGATCAGTACAAAAAAT+GGG | + | chr2_2:40062358-40062377 | Msa0250950:CDS | 25.0% |
| ! | TGAAACATTACATAAGATTG+AGG | - | chr2_2:40062525-40062544 | None:intergenic | 25.0% |
| ! | CAAATTATCTGTTGAACTAT+TGG | - | chr2_2:40062689-40062708 | None:intergenic | 25.0% |
| ! | TGGAAGAAAAAAATCATTGA+TGG | - | chr2_2:40062820-40062839 | None:intergenic | 25.0% |
| !!! | TTTTTTTCTTCCATTTCCAA+TGG | + | chr2_2:40062827-40062846 | Msa0250950:intron | 25.0% |
| ! | AAGAACAGTTGTAATGAATT+GGG | + | chr2_2:40062865-40062884 | Msa0250950:intron | 25.0% |
| ! | AGTAGTCTATCAATGATATA+TGG | + | chr2_2:40062926-40062945 | Msa0250950:intron | 25.0% |
| ! | AAAAAGATTAAGCAATTTCC+CGG | - | chr2_2:40063236-40063255 | None:intergenic | 25.0% |
| !!! | ATTGCTTAATCTTTTTCGTA+CGG | + | chr2_2:40063240-40063259 | Msa0250950:CDS | 25.0% |
| !!! | GTTTAACTCTTTTTTGGTTA+TGG | + | chr2_2:40063366-40063385 | Msa0250950:three_prime_UTR | 25.0% |
| AATATGGAGCTATATAGTTC+AGG | - | chr2_2:40056633-40056652 | None:intergenic | 30.0% | |
| AGGCTTATAGAAAAAGGAAA+AGG | - | chr2_2:40056809-40056828 | None:intergenic | 30.0% | |
| ! | AAAGACAGCGTTAATTTGAA+TGG | + | chr2_2:40056869-40056888 | Msa0250950:exon | 30.0% |
| CTTATATTCATCAGCTATTC+AGG | + | chr2_2:40057313-40057332 | Msa0250950:intron | 30.0% | |
| TTGGTATAATTGTGTGACTA+CGG | - | chr2_2:40057413-40057432 | None:intergenic | 30.0% | |
| !! | TTCGGTGTACAAAATTTTGA+GGG | - | chr2_2:40057491-40057510 | None:intergenic | 30.0% |
| !! | TTTCGGTGTACAAAATTTTG+AGG | - | chr2_2:40057492-40057511 | None:intergenic | 30.0% |
| TACACACAACAATTTCGTTT+CGG | - | chr2_2:40057509-40057528 | None:intergenic | 30.0% | |
| CTTGCATATACCAAATCTTA+AGG | - | chr2_2:40057543-40057562 | None:intergenic | 30.0% | |
| TGAGTTGTACAAAAAATGCA+GGG | - | chr2_2:40057659-40057678 | None:intergenic | 30.0% | |
| ! | TTGAGTTGTACAAAAAATGC+AGG | - | chr2_2:40057660-40057679 | None:intergenic | 30.0% |
| ! | CTCAAAAGTATATACAGTGT+GGG | - | chr2_2:40057743-40057762 | None:intergenic | 30.0% |
| GAAACTATTTAAGTCAGCAA+AGG | - | chr2_2:40057864-40057883 | None:intergenic | 30.0% | |
| ACAACAAAACCTTCACAAAT+TGG | - | chr2_2:40058086-40058105 | None:intergenic | 30.0% | |
| !!! | ATTTGTGAAGGTTTTGTTGT+TGG | + | chr2_2:40058086-40058105 | Msa0250950:intron | 30.0% |
| TAGATATGCAATCTTCAACT+GGG | - | chr2_2:40058288-40058307 | None:intergenic | 30.0% | |
| AGAACCACTATATCATTTGT+GGG | - | chr2_2:40058368-40058387 | None:intergenic | 30.0% | |
| AGGATGAAACTGAAATTTGA+TGG | + | chr2_2:40058749-40058768 | Msa0250950:intron | 30.0% | |
| ATTTCACCTGTGGTAAAAAA+TGG | - | chr2_2:40058935-40058954 | None:intergenic | 30.0% | |
| TTAGTTCATGACCAGATAAA+AGG | - | chr2_2:40059517-40059536 | None:intergenic | 30.0% | |
| ! | TAGGAACTGTCTAAAACAAA+AGG | - | chr2_2:40059554-40059573 | None:intergenic | 30.0% |
| ACTGCAACAGTAATGTTAAT+TGG | + | chr2_2:40059631-40059650 | Msa0250950:CDS | 30.0% | |
| CTGCAACAGTAATGTTAATT+GGG | + | chr2_2:40059632-40059651 | Msa0250950:CDS | 30.0% | |
| AAGATATTATTCCAGTTCCA+GGG | + | chr2_2:40059728-40059747 | Msa0250950:intron | 30.0% | |
| ! | GTACTCTTTATCATTTTGCT+AGG | + | chr2_2:40059949-40059968 | Msa0250950:intron | 30.0% |
| !!! | TGCTAGGAATTTTGTTTTTG+AGG | + | chr2_2:40059965-40059984 | Msa0250950:intron | 30.0% |
| ATGAAAACATACAACTTTGG+AGG | - | chr2_2:40059992-40060011 | None:intergenic | 30.0% | |
| GTGATGAAAACATACAACTT+TGG | - | chr2_2:40059995-40060014 | None:intergenic | 30.0% | |
| ! | TAATTTTTCTGTCATGCTGA+TGG | + | chr2_2:40060032-40060051 | Msa0250950:intron | 30.0% |
| TACAAGCATACTAGATATCT+GGG | - | chr2_2:40060271-40060290 | None:intergenic | 30.0% | |
| ATACAAGCATACTAGATATC+TGG | - | chr2_2:40060272-40060291 | None:intergenic | 30.0% | |
| TGAAAAATGCTCAAAACTAG+GGG | + | chr2_2:40060359-40060378 | Msa0250950:intron | 30.0% | |
| GTGAATATCTTAGTACACAT+TGG | - | chr2_2:40060774-40060793 | None:intergenic | 30.0% | |
| AAGAAGCAAAATAGAGAAAG+TGG | - | chr2_2:40060796-40060815 | None:intergenic | 30.0% | |
| CTAACACATAAATATTGGGA+TGG | - | chr2_2:40060895-40060914 | None:intergenic | 30.0% | |
| !!! | TTAATTGGTTTTCTTCTTCC+TGG | + | chr2_2:40060987-40061006 | Msa0250950:intron | 30.0% |
| !!! | TAATTGGTTTTCTTCTTCCT+GGG | + | chr2_2:40060988-40061007 | Msa0250950:intron | 30.0% |
| AAGAATGTAAAAAAACACCC+AGG | - | chr2_2:40061008-40061027 | None:intergenic | 30.0% | |
| ATTCTCATAAGTGAACTACA+TGG | - | chr2_2:40061339-40061358 | None:intergenic | 30.0% | |
| !! | TGTTGATTTAAGAGAGACTA+GGG | - | chr2_2:40061430-40061449 | None:intergenic | 30.0% |
| !! | ATGTTGATTTAAGAGAGACT+AGG | - | chr2_2:40061431-40061450 | None:intergenic | 30.0% |
| AGTCTAAAAATCAACCAGAA+TGG | + | chr2_2:40061578-40061597 | Msa0250950:intron | 30.0% | |
| TACTTAATGCTTCGTTGAAT+TGG | - | chr2_2:40061604-40061623 | None:intergenic | 30.0% | |
| ! | AACGAAGCATTAAGTACAAA+AGG | + | chr2_2:40061608-40061627 | Msa0250950:intron | 30.0% |
| !! | TAAGCTCTGTTTTTCATACA+TGG | + | chr2_2:40061631-40061650 | Msa0250950:intron | 30.0% |
| TGTGATAAAAGGAGAAAACA+AGG | + | chr2_2:40061735-40061754 | Msa0250950:intron | 30.0% | |
| !! | TATTTCCAGAGAAGCATTAA+TGG | - | chr2_2:40061792-40061811 | None:intergenic | 30.0% |
| ! | TTTTTCTTTGTCTCTTCTCT+TGG | - | chr2_2:40061817-40061836 | None:intergenic | 30.0% |
| ! | TGTGCTGATACATATTTAGA+CGG | + | chr2_2:40061949-40061968 | Msa0250950:intron | 30.0% |
| ! | TTTTTGTTCATTTGGAGGTA+AGG | - | chr2_2:40062141-40062160 | None:intergenic | 30.0% |
| !! | AATGCTTTTTGTTCATTTGG+AGG | - | chr2_2:40062146-40062165 | None:intergenic | 30.0% |
| !! | TGGAATGCTTTTTGTTCATT+TGG | - | chr2_2:40062149-40062168 | None:intergenic | 30.0% |
| !! | GAACAAAAAGCATTCCATAA+CGG | + | chr2_2:40062152-40062171 | Msa0250950:intron | 30.0% |
| !! | AACAAAAAGCATTCCATAAC+GGG | + | chr2_2:40062153-40062172 | Msa0250950:intron | 30.0% |
| TGTGTGTTTCTTATCTGATT+TGG | + | chr2_2:40062245-40062264 | Msa0250950:intron | 30.0% | |
| !! | CTTCATTTTTATCGTTATGC+AGG | + | chr2_2:40062269-40062288 | Msa0250950:intron | 30.0% |
| CTAGTGATCAGTACAAAAAA+TGG | + | chr2_2:40062357-40062376 | Msa0250950:CDS | 30.0% | |
| !! | AAAACAAATGGTTCTGACAT+TGG | + | chr2_2:40062627-40062646 | Msa0250950:intron | 30.0% |
| ATACTATGAACCATTGGAAA+TGG | - | chr2_2:40062840-40062859 | None:intergenic | 30.0% | |
| TCATCAATACTATGAACCAT+TGG | - | chr2_2:40062846-40062865 | None:intergenic | 30.0% | |
| GAAGAACAGTTGTAATGAAT+TGG | + | chr2_2:40062864-40062883 | Msa0250950:intron | 30.0% | |
| AGTCTATCAATGATATATGG+TGG | + | chr2_2:40062929-40062948 | Msa0250950:intron | 30.0% | |
| !! | TTGCTTAATCTTTTTCGTAC+GGG | + | chr2_2:40063241-40063260 | Msa0250950:CDS | 30.0% |
| AAAAGTTACACACAATGCAT+TGG | - | chr2_2:40063322-40063341 | None:intergenic | 30.0% | |
| ! | ACTCCATTTAGTTTCGTGAA+AGG | + | chr2_2:40056548-40056567 | Msa0250950:five_prime_UTR | 35.0% |
| !! | GAAATGGAAAGAGTATTGAG+AGG | - | chr2_2:40056780-40056799 | None:intergenic | 35.0% |
| AAGGAAAAGGAAGGAAGAAA+TGG | - | chr2_2:40056796-40056815 | None:intergenic | 35.0% | |
| !!! | ATAGTTTGAGTTTTGAGGAG+CGG | - | chr2_2:40056833-40056852 | None:intergenic | 35.0% |
| ATTATGGAACGATCCTTTCA+TGG | + | chr2_2:40056974-40056993 | Msa0250950:CDS | 35.0% | |
| AAATGACATTGAGAGGAGAA+TGG | - | chr2_2:40057074-40057093 | None:intergenic | 35.0% | |
| TGTGAGTAAATGACATTGAG+AGG | - | chr2_2:40057081-40057100 | None:intergenic | 35.0% | |
| !! | ATTTGCCTGAGCTTTTGAAA+CGG | + | chr2_2:40057253-40057272 | Msa0250950:intron | 35.0% |
| TATTCATCAGCTATTCAGGA+AGG | + | chr2_2:40057317-40057336 | Msa0250950:intron | 35.0% | |
| ! | GTATGGCGTCTCAAATATTT+TGG | + | chr2_2:40057449-40057468 | Msa0250950:intron | 35.0% |
| GAAACGAAATTGTTGTGTGT+AGG | + | chr2_2:40057508-40057527 | Msa0250950:intron | 35.0% | |
| GAATTTGAGCCCTTAAGATT+TGG | + | chr2_2:40057530-40057549 | Msa0250950:intron | 35.0% | |
| AGTTGTACAAAAAATGCAGG+GGG | - | chr2_2:40057657-40057676 | None:intergenic | 35.0% | |
| GAGTTGTACAAAAAATGCAG+GGG | - | chr2_2:40057658-40057677 | None:intergenic | 35.0% | |
| AAAGTATATACAGTGTGGGA+GGG | - | chr2_2:40057739-40057758 | None:intergenic | 35.0% | |
| ! | AAAAGTATATACAGTGTGGG+AGG | - | chr2_2:40057740-40057759 | None:intergenic | 35.0% |
| ! | CCTCAAAAGTATATACAGTG+TGG | - | chr2_2:40057744-40057763 | None:intergenic | 35.0% |
| ! | CCACACTGTATATACTTTTG+AGG | + | chr2_2:40057741-40057760 | Msa0250950:intron | 35.0% |
| ! | GTATTTTCAAATATCCGCCA+TGG | + | chr2_2:40058023-40058042 | Msa0250950:intron | 35.0% |
| !! | AGATATCACCAGTGGATTTT+TGG | + | chr2_2:40058047-40058066 | Msa0250950:intron | 35.0% |
| !! | GGATTTTTGGATAACCGATA+TGG | + | chr2_2:40058060-40058079 | Msa0250950:intron | 35.0% |
| GAACAAATCCTTGTAAAGGA+TGG | - | chr2_2:40058225-40058244 | None:intergenic | 35.0% | |
| ACAATCTTCTTCCCTTCAAT+TGG | + | chr2_2:40058255-40058274 | Msa0250950:intron | 35.0% | |
| GTAGATATGCAATCTTCAAC+TGG | - | chr2_2:40058289-40058308 | None:intergenic | 35.0% | |
| ! | TTAATAACGGGGAGTTAACT+GGG | - | chr2_2:40058315-40058334 | None:intergenic | 35.0% |
| ! | TTTAATAACGGGGAGTTAAC+TGG | - | chr2_2:40058316-40058335 | None:intergenic | 35.0% |
| TTGCCTCATGGGTTTAATAA+CGG | - | chr2_2:40058328-40058347 | None:intergenic | 35.0% | |
| TCAAGAATATGTTGCCTCAT+GGG | - | chr2_2:40058339-40058358 | None:intergenic | 35.0% | |
| ATCAAGAATATGTTGCCTCA+TGG | - | chr2_2:40058340-40058359 | None:intergenic | 35.0% | |
| CAGAACCACTATATCATTTG+TGG | - | chr2_2:40058369-40058388 | None:intergenic | 35.0% | |
| AAAAATTGCAACTTCTGGTG+TGG | - | chr2_2:40058482-40058501 | None:intergenic | 35.0% | |
| !! | ACAGAGAGAAGTATTCTCAA+TGG | + | chr2_2:40058633-40058652 | Msa0250950:intron | 35.0% |
| TCGGAATGTTTATCGTTTGA+GGG | - | chr2_2:40058666-40058685 | None:intergenic | 35.0% | |
| TTCGGAATGTTTATCGTTTG+AGG | - | chr2_2:40058667-40058686 | None:intergenic | 35.0% | |
| CAGATCAAATTCCAGAGTTT+CGG | - | chr2_2:40058685-40058704 | None:intergenic | 35.0% | |
| AATGTGAGACAGATTGATGA+AGG | + | chr2_2:40058729-40058748 | Msa0250950:intron | 35.0% | |
| !! | CTCTAATTTGCTTAGTACAC+TGG | - | chr2_2:40058823-40058842 | None:intergenic | 35.0% |
| ! | GTTAGTGTATGTGTCACTAT+TGG | - | chr2_2:40058849-40058868 | None:intergenic | 35.0% |
| ! | TGATTTGTCGATTACTGGTT+TGG | - | chr2_2:40058879-40058898 | None:intergenic | 35.0% |
| !! | TCAGTTGATTTGTCGATTAC+TGG | - | chr2_2:40058884-40058903 | None:intergenic | 35.0% |
| GTAATCGACAAATCAACTGA+AGG | + | chr2_2:40058884-40058903 | Msa0250950:intron | 35.0% | |
| AACAAACACAATTTCACCTG+TGG | - | chr2_2:40058945-40058964 | None:intergenic | 35.0% | |
| AATTATTCTGTAACCAGGCA+TGG | + | chr2_2:40059004-40059023 | Msa0250950:intron | 35.0% | |
| TAAAATAATCCATCCATGCC+TGG | - | chr2_2:40059020-40059039 | None:intergenic | 35.0% | |
| !!! | AGGCATGGATGGATTATTTT+AGG | + | chr2_2:40059019-40059038 | Msa0250950:intron | 35.0% |
| !!! | GGCATGGATGGATTATTTTA+GGG | + | chr2_2:40059020-40059039 | Msa0250950:intron | 35.0% |
| GATAGAAGATCTCACGAAAA+AGG | - | chr2_2:40059116-40059135 | None:intergenic | 35.0% | |
| ATACATTGGAAAAGGACATG+AGG | + | chr2_2:40059197-40059216 | Msa0250950:intron | 35.0% | |
| AATCTGTATGTGTATGTGTG+TGG | + | chr2_2:40059315-40059334 | Msa0250950:intron | 35.0% | |
| GTGTATAACAGACAAATCCA+TGG | - | chr2_2:40059351-40059370 | None:intergenic | 35.0% | |
| TGACCAGATAAAAGGAAAGA+GGG | - | chr2_2:40059509-40059528 | None:intergenic | 35.0% | |
| ATGACCAGATAAAAGGAAAG+AGG | - | chr2_2:40059510-40059529 | None:intergenic | 35.0% | |
| ! | AGTTCCTAAGCCTTATACAA+CGG | + | chr2_2:40059566-40059585 | Msa0250950:intron | 35.0% |
| TTAATTGGGCTTCCAAATGT+TGG | + | chr2_2:40059646-40059665 | Msa0250950:CDS | 35.0% | |
| GCTTCCAAATGTTGGAAAAT+CGG | + | chr2_2:40059654-40059673 | Msa0250950:CDS | 35.0% | |
| CAAGATATTATTCCAGTTCC+AGG | + | chr2_2:40059727-40059746 | Msa0250950:intron | 35.0% | |
| TTGTATAAGATGCTCATGCT+TGG | + | chr2_2:40060286-40060305 | Msa0250950:intron | 35.0% | |
| ! | CGTTCAGTTTTTGTATTTGG+TGG | - | chr2_2:40060407-40060426 | None:intergenic | 35.0% |
| AGTTATAATGCACTGAACAC+AGG | + | chr2_2:40060559-40060578 | Msa0250950:intron | 35.0% | |
| TCTTAGTTAGTAGTGGTTAG+TGG | + | chr2_2:40061024-40061043 | Msa0250950:intron | 35.0% | |
| !!! | AAGTGTTGAGAACTTTTGAG+AGG | + | chr2_2:40061108-40061127 | Msa0250950:intron | 35.0% |
| TAATCAATAGGCAACCATTC+TGG | + | chr2_2:40061289-40061308 | Msa0250950:intron | 35.0% | |
| AATCAATAGGCAACCATTCT+GGG | + | chr2_2:40061290-40061309 | Msa0250950:intron | 35.0% | |
| ! | GTTGATTTAAGAGAGACTAG+GGG | - | chr2_2:40061429-40061448 | None:intergenic | 35.0% |
| GAAATAGCTTAACTGTCTTG+TGG | - | chr2_2:40061503-40061522 | None:intergenic | 35.0% | |
| TTCAGTCCATTTCATGAAAC+TGG | - | chr2_2:40061887-40061906 | None:intergenic | 35.0% | |
| TGTATCAGCACAATGTTGTT+GGG | - | chr2_2:40061941-40061960 | None:intergenic | 35.0% | |
| ATGTATCAGCACAATGTTGT+TGG | - | chr2_2:40061942-40061961 | None:intergenic | 35.0% | |
| ATGTACTAGCTAGAGCAAAA+TGG | - | chr2_2:40061995-40062014 | None:intergenic | 35.0% | |
| TAAGGTGTACTTGTTTGAGA+AGG | - | chr2_2:40062123-40062142 | None:intergenic | 35.0% | |
| AATAAACACTTGTCCCGTTA+TGG | - | chr2_2:40062169-40062188 | None:intergenic | 35.0% | |
| ACTACACATCAAGCTAGAAA+AGG | + | chr2_2:40062580-40062599 | Msa0250950:intron | 35.0% | |
| ACATCAAGCTAGAAAAGGAA+AGG | + | chr2_2:40062585-40062604 | Msa0250950:intron | 35.0% | |
| !! | GTTGGTTTGTATGCTATTGA+TGG | + | chr2_2:40062722-40062741 | Msa0250950:intron | 35.0% |
| TTCATTGTGATACTATGCCT+TGG | + | chr2_2:40062774-40062793 | Msa0250950:intron | 35.0% | |
| TGATACTATGCCTTGGAATT+TGG | + | chr2_2:40062781-40062800 | Msa0250950:intron | 35.0% | |
| AGTCACATATCCAAATTCCA+AGG | - | chr2_2:40062794-40062813 | None:intergenic | 35.0% | |
| ! | TTCAGTTAACTCTGTTTTGC+AGG | + | chr2_2:40063039-40063058 | Msa0250950:intron | 35.0% |
| ! | GAAACAGCTTCATCTTTTGA+TGG | + | chr2_2:40063097-40063116 | Msa0250950:CDS | 35.0% |
| GCTCCTTTCACGAAACTAAA+TGG | - | chr2_2:40056554-40056573 | None:intergenic | 40.0% | |
| !! | GAAAGAGTATTGAGAGGAGT+GGG | - | chr2_2:40056774-40056793 | None:intergenic | 40.0% |
| !!! | TAGTTTGAGTTTTGAGGAGC+GGG | - | chr2_2:40056832-40056851 | None:intergenic | 40.0% |
| AAAAGCAGCGTTATACGTGA+AGG | + | chr2_2:40056951-40056970 | Msa0250950:CDS | 40.0% | |
| GCGTTATACGTGAAGGATTA+TGG | + | chr2_2:40056958-40056977 | Msa0250950:CDS | 40.0% | |
| CAAAGGGATTCTTTGTGCAA+TGG | - | chr2_2:40057015-40057034 | None:intergenic | 40.0% | |
| CATTGCACAAAGAATCCCTT+TGG | + | chr2_2:40057013-40057032 | Msa0250950:CDS | 40.0% | |
| TTCTCGTTGTTCCGCTTTAA+AGG | + | chr2_2:40057148-40057167 | Msa0250950:CDS | 40.0% | |
| !! | GTTGTTCCGCTTTAAAGGTA+AGG | + | chr2_2:40057153-40057172 | Msa0250950:intron | 40.0% |
| !! | TCCGCTTTAAAGGTAAGGTT+CGG | + | chr2_2:40057158-40057177 | Msa0250950:intron | 40.0% |
| ! | ACCGAACCTTACCTTTAAAG+CGG | - | chr2_2:40057162-40057181 | None:intergenic | 40.0% |
| !!! | TTTGCCTGAGCTTTTGAAAC+GGG | + | chr2_2:40057254-40057273 | Msa0250950:intron | 40.0% |
| TTATCCCGTTTCAAAAGCTC+AGG | - | chr2_2:40057261-40057280 | None:intergenic | 40.0% | |
| !! | TGGCGTCTCAAATATTTTGG+AGG | + | chr2_2:40057452-40057471 | Msa0250950:intron | 40.0% |
| !!! | ATTTTGAGGGCACTAGAAGA+GGG | - | chr2_2:40057478-40057497 | None:intergenic | 40.0% |
| !!! | AATTTTGAGGGCACTAGAAG+AGG | - | chr2_2:40057479-40057498 | None:intergenic | 40.0% |
| ! | ACAGGGTGTCAAAACTTTGA+GGG | - | chr2_2:40057603-40057622 | None:intergenic | 40.0% |
| TTGTACAAAAAATGCAGGGG+GGG | - | chr2_2:40057655-40057674 | None:intergenic | 40.0% | |
| GTTGTACAAAAAATGCAGGG+GGG | - | chr2_2:40057656-40057675 | None:intergenic | 40.0% | |
| AATGCGAGTTATGTGAAGTG+TGG | + | chr2_2:40057764-40057783 | Msa0250950:intron | 40.0% | |
| AGTTATGTGAAGTGTGGAGT+TGG | + | chr2_2:40057770-40057789 | Msa0250950:intron | 40.0% | |
| ACACTAGTTATACATCAGCC+AGG | - | chr2_2:40057796-40057815 | None:intergenic | 40.0% | |
| TCGGTTATCCAAAAATCCAC+TGG | - | chr2_2:40058058-40058077 | None:intergenic | 40.0% | |
| CCTTCACAAATTGGCCATAT+CGG | - | chr2_2:40058077-40058096 | None:intergenic | 40.0% | |
| !!! | GTGAAGGTTTTGTTGTTGGT+CGG | + | chr2_2:40058090-40058109 | Msa0250950:intron | 40.0% |
| GTTAGCTACAATGTTGCCAA+TGG | - | chr2_2:40058156-40058175 | None:intergenic | 40.0% | |
| CAAATCCTTGTAAAGGATGG+CGG | - | chr2_2:40058222-40058241 | None:intergenic | 40.0% | |
| TCTTCTTCCCTTCAATTGGT+TGG | + | chr2_2:40058259-40058278 | Msa0250950:intron | 40.0% | |
| TGCCTCATGGGTTTAATAAC+GGG | - | chr2_2:40058327-40058346 | None:intergenic | 40.0% | |
| CAGACCCACAAATGATATAG+TGG | + | chr2_2:40058361-40058380 | Msa0250950:intron | 40.0% | |
| ! | TATAGTGGTTCTGCTTCTGT+CGG | + | chr2_2:40058376-40058395 | Msa0250950:intron | 40.0% |
| !! | TGGGATTAGAGCCATTTTCA+TGG | + | chr2_2:40058454-40058473 | Msa0250950:intron | 40.0% |
| CAGGGAAAAATTGCAACTTC+TGG | - | chr2_2:40058487-40058506 | None:intergenic | 40.0% | |
| ! | AGTTGCAATTTTTCCCTGCA+AGG | + | chr2_2:40058489-40058508 | Msa0250950:intron | 40.0% |
| ! | GTTGCAATTTTTCCCTGCAA+GGG | + | chr2_2:40058490-40058509 | Msa0250950:intron | 40.0% |
| ! | TTGCAATTTTTCCCTGCAAG+GGG | + | chr2_2:40058491-40058510 | Msa0250950:intron | 40.0% |
| CGATAAACATTCCGAAACTC+TGG | + | chr2_2:40058671-40058690 | Msa0250950:intron | 40.0% | |
| TCTGTAAAATATGGGACGAG+AGG | + | chr2_2:40058701-40058720 | Msa0250950:intron | 40.0% | |
| !! | TGTCGATTACTGGTTTGGTA+AGG | - | chr2_2:40058874-40058893 | None:intergenic | 40.0% |
| ! | TTGCCCTCTTTCCTTTTATC+TGG | + | chr2_2:40059503-40059522 | Msa0250950:intron | 40.0% |
| !!! | AGTGCCGATTTTCCAACATT+TGG | - | chr2_2:40059661-40059680 | None:intergenic | 40.0% |
| ACTAATGCCTTGCATCATGT+TGG | + | chr2_2:40059682-40059701 | Msa0250950:CDS | 40.0% | |
| CTAATGCCTTGCATCATGTT+GGG | + | chr2_2:40059683-40059702 | Msa0250950:CDS | 40.0% | |
| AATTCTCCCAACATGATGCA+AGG | - | chr2_2:40059692-40059711 | None:intergenic | 40.0% | |
| CTCAACGTTTGAGAAACAAG+TGG | + | chr2_2:40059770-40059789 | Msa0250950:intron | 40.0% | |
| TCGTTGTCTGTTCAACATGA+TGG | - | chr2_2:40060175-40060194 | None:intergenic | 40.0% | |
| GCATACTAGATATCTGGGAA+CGG | - | chr2_2:40060266-40060285 | None:intergenic | 40.0% | |
| !! | TGTATTTGGTGGTGTCGTTA+AGG | - | chr2_2:40060396-40060415 | None:intergenic | 40.0% |
| ! | ATCCTGGTTCTTATCTATGC+TGG | - | chr2_2:40060469-40060488 | None:intergenic | 40.0% |
| ACATCAACATTAGGAACCTC+TGG | - | chr2_2:40060938-40060957 | None:intergenic | 40.0% | |
| AGTAGTGGTTAGTGGTAGTA+TGG | + | chr2_2:40061032-40061051 | Msa0250950:intron | 40.0% | |
| TTGTATGTGTGTCGAGCTAT+AGG | + | chr2_2:40061064-40061083 | Msa0250950:intron | 40.0% | |
| ATTGACAGCTCAATCCTCAA+GGG | - | chr2_2:40061178-40061197 | None:intergenic | 40.0% | |
| AATTGACAGCTCAATCCTCA+AGG | - | chr2_2:40061179-40061198 | None:intergenic | 40.0% | |
| GTGAAATCAACAACCCAGAA+TGG | - | chr2_2:40061306-40061325 | None:intergenic | 40.0% | |
| !! | TCTGGGTTGTTGATTTCACT+TGG | + | chr2_2:40061307-40061326 | Msa0250950:intron | 40.0% |
| TAAGAGAGACTAGGGGTTTA+AGG | - | chr2_2:40061422-40061441 | None:intergenic | 40.0% | |
| GCAATCTACTTAAAGTCACG+AGG | + | chr2_2:40061451-40061470 | Msa0250950:intron | 40.0% | |
| TACGCCAACATTCAACTACA+AGG | + | chr2_2:40061702-40061721 | Msa0250950:intron | 40.0% | |
| ACGCCAACATTCAACTACAA+GGG | + | chr2_2:40061703-40061722 | Msa0250950:intron | 40.0% | |
| TAGCCCTTGTAGTTGAATGT+TGG | - | chr2_2:40061709-40061728 | None:intergenic | 40.0% | |
| ! | GGCTAGCTACTTGTGATAAA+AGG | + | chr2_2:40061724-40061743 | Msa0250950:intron | 40.0% |
| TAAGAGACGAGAGAAAGAGA+TGG | + | chr2_2:40061763-40061782 | Msa0250950:intron | 40.0% | |
| !! | TTCCAGAGAAGCATTAATGG+AGG | - | chr2_2:40061789-40061808 | None:intergenic | 40.0% |
| TCGCTTCTCACTATGCATTA+TGG | + | chr2_2:40061857-40061876 | Msa0250950:intron | 40.0% | |
| CAGCTCATTAGATTGCACTA+TGG | - | chr2_2:40061912-40061931 | None:intergenic | 40.0% | |
| GTGTACTTGTTTGAGAAGGT+GGG | - | chr2_2:40062119-40062138 | None:intergenic | 40.0% | |
| ACGGGACAAGTGTTTATTTC+TGG | + | chr2_2:40062171-40062190 | Msa0250950:intron | 40.0% | |
| TATCGTTATGCAGGAGCAAT+TGG | + | chr2_2:40062278-40062297 | Msa0250950:intron | 40.0% | |
| ATCGTTATGCAGGAGCAATT+GGG | + | chr2_2:40062279-40062298 | Msa0250950:intron | 40.0% | |
| ATGGGAAAAGTTATCGAGCA+AGG | + | chr2_2:40062376-40062395 | Msa0250950:CDS | 40.0% | |
| ATACCTGTGTGTGATCGTTA+GGG | - | chr2_2:40062481-40062500 | None:intergenic | 40.0% | |
| ACAATGAAAAATCCCCATGC+AGG | - | chr2_2:40062762-40062781 | None:intergenic | 40.0% | |
| GCATAAACTCGAGGAAGATA+TGG | - | chr2_2:40062977-40062996 | None:intergenic | 40.0% | |
| TGCAAGATTGCATAAACTCG+AGG | - | chr2_2:40062986-40063005 | None:intergenic | 40.0% | |
| CTTCACGTTCAGTTGAAACA+TGG | - | chr2_2:40063192-40063211 | None:intergenic | 40.0% | |
| !! | GTCAGTGAATATTTCTGGGA+AGG | - | chr2_2:40063294-40063313 | None:intergenic | 40.0% |
| CTGCGTCAGTGAATATTTCT+GGG | - | chr2_2:40063298-40063317 | None:intergenic | 40.0% | |
| GGAGCTATATAGTTCAGGTG+CGG | - | chr2_2:40056628-40056647 | None:intergenic | 45.0% | |
| !! | ATTGAGAGGAGTGGGTTTTG+TGG | - | chr2_2:40056766-40056785 | None:intergenic | 45.0% |
| !! | GGAAAGAGTATTGAGAGGAG+TGG | - | chr2_2:40056775-40056794 | None:intergenic | 45.0% |
| AGCGGGAGGCTTATAGAAAA+AGG | - | chr2_2:40056815-40056834 | None:intergenic | 45.0% | |
| CGAGTAGAAGCAACCATGAA+AGG | - | chr2_2:40056990-40057009 | None:intergenic | 45.0% | |
| GGACGATGAGATCAACCAAA+GGG | - | chr2_2:40057031-40057050 | None:intergenic | 45.0% | |
| TGGACGATGAGATCAACCAA+AGG | - | chr2_2:40057032-40057051 | None:intergenic | 45.0% | |
| GAATCCTTGCATCAGTGACA+TGG | - | chr2_2:40057052-40057071 | None:intergenic | 45.0% | |
| ! | CACAGGGTGTCAAAACTTTG+AGG | - | chr2_2:40057604-40057623 | None:intergenic | 45.0% |
| !! | ATACAGTGTGGGAGGGTATT+AGG | - | chr2_2:40057732-40057751 | None:intergenic | 45.0% |
| AGAATAGGAGCGATCAGCAT+GGG | + | chr2_2:40057977-40057996 | Msa0250950:intron | 45.0% | |
| CCGATATGGCCAATTTGTGA+AGG | + | chr2_2:40058074-40058093 | Msa0250950:intron | 45.0% | |
| TGGTCGGTATGTCAGATTGT+TGG | + | chr2_2:40058106-40058125 | Msa0250950:intron | 45.0% | |
| AGCTACAATGTTGCCAATGG+CGG | - | chr2_2:40058153-40058172 | None:intergenic | 45.0% | |
| TGGGCATCCAACCAATTGAA+GGG | - | chr2_2:40058269-40058288 | None:intergenic | 45.0% | |
| TCCCCGTTATTAAACCCATG+AGG | + | chr2_2:40058322-40058341 | Msa0250950:intron | 45.0% | |
| GCCTCATGGGTTTAATAACG+GGG | - | chr2_2:40058326-40058345 | None:intergenic | 45.0% | |
| ! | AATTTTTCCCTGCAAGGGGA+TGG | + | chr2_2:40058495-40058514 | Msa0250950:intron | 45.0% |
| ! | ATTTTTCCCTGCAAGGGGAT+GGG | + | chr2_2:40058496-40058515 | Msa0250950:intron | 45.0% |
| GTCTGATAGGCACGCTTTAA+TGG | - | chr2_2:40058528-40058547 | None:intergenic | 45.0% | |
| ATTCTGTAACCAGGCATGGA+TGG | + | chr2_2:40059008-40059027 | Msa0250950:intron | 45.0% | |
| GAAACGAACTGCGTATCTTG+TGG | + | chr2_2:40059042-40059061 | Msa0250950:CDS | 45.0% | |
| TGGAGTCGATGCTCATAACA+AGG | + | chr2_2:40059062-40059081 | Msa0250950:CDS | 45.0% | |
| !! | TAACAAGGAGAGCATCAGAC+AGG | + | chr2_2:40059077-40059096 | Msa0250950:CDS | 45.0% |
| GAGATCTTCTATCGAGTCTC+AGG | + | chr2_2:40059123-40059142 | Msa0250950:intron | 45.0% | |
| !! | TGTGTGGCATGTTGTTTCCA+TGG | + | chr2_2:40059331-40059350 | Msa0250950:intron | 45.0% |
| TATTCCAGTTCCAGGGAAAC+AGG | + | chr2_2:40059735-40059754 | Msa0250950:intron | 45.0% | |
| ! | TGTCATTTAGCCTGTTTCCC+TGG | - | chr2_2:40059748-40059767 | None:intergenic | 45.0% |
| CTAATGTCTTTAGTCTCCCC+TGG | - | chr2_2:40059896-40059915 | None:intergenic | 45.0% | |
| AGATGCTCATGCTTGGTAAG+CGG | + | chr2_2:40060293-40060312 | Msa0250950:intron | 45.0% | |
| CACCAGCATAGATAAGAACC+AGG | + | chr2_2:40060464-40060483 | Msa0250950:intron | 45.0% | |
| TGGCTAGCAATCTGAAAGGA+AGG | - | chr2_2:40060875-40060894 | None:intergenic | 45.0% | |
| TCAACATTAGGAACCTCTGG+AGG | - | chr2_2:40060935-40060954 | None:intergenic | 45.0% | |
| ATGTGTGTCGAGCTATAGGA+AGG | + | chr2_2:40061068-40061087 | Msa0250950:intron | 45.0% | |
| ! | AACTGTCTTGTGGCTGCTTT+GGG | - | chr2_2:40061493-40061512 | None:intergenic | 45.0% |
| TAACTGTCTTGTGGCTGCTT+TGG | - | chr2_2:40061494-40061513 | None:intergenic | 45.0% | |
| CTTCGTTGAATTGGCCATTC+TGG | - | chr2_2:40061595-40061614 | None:intergenic | 45.0% | |
| GAAGCGATGTAGGAATGTGA+TGG | - | chr2_2:40061844-40061863 | None:intergenic | 45.0% | |
| TGCATAGTGAGAAGCGATGT+AGG | - | chr2_2:40061854-40061873 | None:intergenic | 45.0% | |
| GGAACGCCAGTTTCATGAAA+TGG | + | chr2_2:40061878-40061897 | Msa0250950:intron | 45.0% | |
| GGTGTACTTGTTTGAGAAGG+TGG | - | chr2_2:40062120-40062139 | None:intergenic | 45.0% | |
| TCGTTATGCAGGAGCAATTG+GGG | + | chr2_2:40062280-40062299 | Msa0250950:intron | 45.0% | |
| ! | ACAGAGTGCTTGACTACATC+TGG | + | chr2_2:40062428-40062447 | Msa0250950:CDS | 45.0% |
| ! | CAGAGTGCTTGACTACATCT+GGG | + | chr2_2:40062429-40062448 | Msa0250950:CDS | 45.0% |
| AATCCCTAACGATCACACAC+AGG | + | chr2_2:40062475-40062494 | Msa0250950:CDS | 45.0% | |
| GATACCTGTGTGTGATCGTT+AGG | - | chr2_2:40062482-40062501 | None:intergenic | 45.0% | |
| ! | CTCTGTTTTGCAGGACAACA+TGG | + | chr2_2:40063048-40063067 | Msa0250950:intron | 45.0% |
| ATGGAAAACTTCCTGCAACG+CGG | - | chr2_2:40063173-40063192 | None:intergenic | 45.0% | |
| CCTGCGTCAGTGAATATTTC+TGG | - | chr2_2:40063299-40063318 | None:intergenic | 45.0% | |
| CCAGAAATATTCACTGACGC+AGG | + | chr2_2:40063296-40063315 | Msa0250950:exon | 45.0% | |
| !! | AATATAAAAATCATATTTAA+GGG | - | chr2_2:40057574-40057593 | None:intergenic | 5.0% |
| !! | AAATATAAAAATCATATTTA+AGG | - | chr2_2:40057575-40057594 | None:intergenic | 5.0% |
| !!! | TAAATATGATTTTTATATTT+TGG | + | chr2_2:40057575-40057594 | Msa0250950:intron | 5.0% |
| !!! | AAATATGATTTTTATATTTT+GGG | + | chr2_2:40057576-40057595 | Msa0250950:intron | 5.0% |
| GGTTGGCAATGATTGAGCGA+CGG | - | chr2_2:40056604-40056623 | None:intergenic | 50.0% | |
| TATAGTTCAGGTGCGGTGGT+TGG | - | chr2_2:40056621-40056640 | None:intergenic | 50.0% | |
| GCTATATAGTTCAGGTGCGG+TGG | - | chr2_2:40056625-40056644 | None:intergenic | 50.0% | |
| !!! | TTTGAGTTTTGAGGAGCGGG+AGG | - | chr2_2:40056829-40056848 | None:intergenic | 50.0% |
| TGAATGGCAGCGACGCAATT+TGG | + | chr2_2:40056885-40056904 | Msa0250950:exon | 50.0% | |
| ACGCAATTTGGAAGGCGAGT+TGG | + | chr2_2:40056897-40056916 | Msa0250950:CDS | 50.0% | |
| TCGTCCATGTCACTGATGCA+AGG | + | chr2_2:40057045-40057064 | Msa0250950:CDS | 50.0% | |
| AGAGTCTGGGCTACAACACA+GGG | - | chr2_2:40057620-40057639 | None:intergenic | 50.0% | |
| TAAATTGGGACTCGATCCCC+TGG | + | chr2_2:40057954-40057973 | Msa0250950:intron | 50.0% | |
| TGATCGCTCCTATTCTCCAG+GGG | - | chr2_2:40057973-40057992 | None:intergenic | 50.0% | |
| CTGATCGCTCCTATTCTCCA+GGG | - | chr2_2:40057974-40057993 | None:intergenic | 50.0% | |
| GAGAATAGGAGCGATCAGCA+TGG | + | chr2_2:40057976-40057995 | Msa0250950:intron | 50.0% | |
| ACTGGTGATATCTGCCATGG+CGG | - | chr2_2:40058040-40058059 | None:intergenic | 50.0% | |
| TCCACTGGTGATATCTGCCA+TGG | - | chr2_2:40058043-40058062 | None:intergenic | 50.0% | |
| ! | ACAATGTTGCCAATGGCGGA+TGG | - | chr2_2:40058149-40058168 | None:intergenic | 50.0% |
| CTGGGCATCCAACCAATTGA+AGG | - | chr2_2:40058270-40058289 | None:intergenic | 50.0% | |
| TGCTTCTGTCGGAGCAACAA+TGG | + | chr2_2:40058387-40058406 | Msa0250950:intron | 50.0% | |
| !! | CTGGTGTGGTGCCATGAAAA+TGG | - | chr2_2:40058468-40058487 | None:intergenic | 50.0% |
| TTGTTTCCCATCCCCTTGCA+GGG | - | chr2_2:40058505-40058524 | None:intergenic | 50.0% | |
| GGCAACTGCATCTGTCTGAT+AGG | - | chr2_2:40058541-40058560 | None:intergenic | 50.0% | |
| ATCAGACAGATGCAGTTGCC+AGG | + | chr2_2:40058541-40058560 | Msa0250950:intron | 50.0% | |
| AGATGCAGTTGCCAGGTAGA+AGG | + | chr2_2:40058548-40058567 | Msa0250950:intron | 50.0% | |
| GATGCAGTTGCCAGGTAGAA+GGG | + | chr2_2:40058549-40058568 | Msa0250950:intron | 50.0% | |
| ATGCAGTTGCCAGGTAGAAG+GGG | + | chr2_2:40058550-40058569 | Msa0250950:intron | 50.0% | |
| CCTGCCGTTGTATAAGGCTT+AGG | - | chr2_2:40059573-40059592 | None:intergenic | 50.0% | |
| ! | CCTAAGCCTTATACAACGGC+AGG | + | chr2_2:40059570-40059589 | Msa0250950:CDS | 50.0% |
| ! | AAGCCTTATACAACGGCAGG+TGG | + | chr2_2:40059573-40059592 | Msa0250950:CDS | 50.0% |
| ! | AGCCTTATACAACGGCAGGT+GGG | + | chr2_2:40059574-40059593 | Msa0250950:CDS | 50.0% |
| TTCCCACCTGCCGTTGTATA+AGG | - | chr2_2:40059579-40059598 | None:intergenic | 50.0% | |
| GTTGGGAGAATTAGTGCTGC+AGG | + | chr2_2:40059700-40059719 | Msa0250950:CDS | 50.0% | |
| TTAGCCTGTTTCCCTGGAAC+TGG | - | chr2_2:40059742-40059761 | None:intergenic | 50.0% | |
| ! | TGGGAAGGTGATTTGTGCAC+AGG | + | chr2_2:40060220-40060239 | Msa0250950:intron | 50.0% |
| GATGCTCATGCTTGGTAAGC+GGG | + | chr2_2:40060294-40060313 | Msa0250950:intron | 50.0% | |
| GGGATGGCTAGCAATCTGAA+AGG | - | chr2_2:40060879-40060898 | None:intergenic | 50.0% | |
| !! | TCCAGCTGTTTTACCTCCAG+AGG | + | chr2_2:40060919-40060938 | Msa0250950:CDS | 50.0% |
| ! | ACCTCTGGAGGTAAAACAGC+TGG | - | chr2_2:40060923-40060942 | None:intergenic | 50.0% |
| TGTGTCGAGCTATAGGAAGG+AGG | + | chr2_2:40061071-40061090 | Msa0250950:intron | 50.0% | |
| GTGTCGAGCTATAGGAAGGA+GGG | + | chr2_2:40061072-40061091 | Msa0250950:intron | 50.0% | |
| TGTCGAGCTATAGGAAGGAG+GGG | + | chr2_2:40061073-40061092 | Msa0250950:intron | 50.0% | |
| AGTAGAGTTGTCGTCCCTTG+AGG | + | chr2_2:40061161-40061180 | Msa0250950:intron | 50.0% | |
| ! | TCTTGTGGCTGCTTTGGGTT+TGG | - | chr2_2:40061488-40061507 | None:intergenic | 50.0% |
| GGCCTCCATTAATGCTTCTC+TGG | + | chr2_2:40061784-40061803 | Msa0250950:intron | 50.0% | |
| AGGAGCAATTGGGGACTGTT+TGG | + | chr2_2:40062289-40062308 | Msa0250950:intron | 50.0% | |
| TTTGCAGGACAACATGGTGC+AGG | + | chr2_2:40063054-40063073 | Msa0250950:intron | 50.0% | |
| TAGTCAGTTTACCGCGTTGC+AGG | + | chr2_2:40063159-40063178 | Msa0250950:CDS | 50.0% | |
| TGAAGAAGATGCTCATGCCG+TGG | + | chr2_2:40063207-40063226 | Msa0250950:CDS | 50.0% | |
| AAGCAATTTCCCGGCAACCA+CGG | - | chr2_2:40063227-40063246 | None:intergenic | 50.0% | |
| !! | CTTTTTCGTACGGGTCGTCT+TGG | + | chr2_2:40063250-40063269 | Msa0250950:CDS | 50.0% |
| CGGAGGACGAAAGTGATCGA+CGG | - | chr2_2:40056584-40056603 | None:intergenic | 55.0% | |
| TGGCAATGATTGAGCGACGG+AGG | - | chr2_2:40056601-40056620 | None:intergenic | 55.0% | |
| TGGCAGCGACGCAATTTGGA+AGG | + | chr2_2:40056889-40056908 | Msa0250950:CDS | 55.0% | |
| ! | GGTTCGGTTCGTTGCTTGCT+TGG | + | chr2_2:40057174-40057193 | Msa0250950:intron | 55.0% |
| CAGAGTCTGGGCTACAACAC+AGG | - | chr2_2:40057621-40057640 | None:intergenic | 55.0% | |
| GTGTTGTAGCCCAGACTCTG+CGG | + | chr2_2:40057621-40057640 | Msa0250950:intron | 55.0% | |
| TGTTGTAGCCCAGACTCTGC+GGG | + | chr2_2:40057622-40057641 | Msa0250950:intron | 55.0% | |
| TGTGAAGTGTGGAGTTGGCC+TGG | + | chr2_2:40057775-40057794 | Msa0250950:intron | 55.0% | |
| GACTCGATCCCCTGGAGAAT+AGG | + | chr2_2:40057962-40057981 | Msa0250950:intron | 55.0% | |
| GCTGATCGCTCCTATTCTCC+AGG | - | chr2_2:40057975-40057994 | None:intergenic | 55.0% | |
| GCCATGGCAGATATCACCAG+TGG | + | chr2_2:40058039-40058058 | Msa0250950:intron | 55.0% | |
| AGATTGTTGGCCGTTCGCCA+TGG | + | chr2_2:40058119-40058138 | Msa0250950:intron | 55.0% | |
| !! | ATGTTGCCAATGGCGGATGG+CGG | - | chr2_2:40058146-40058165 | None:intergenic | 55.0% |
| GCGGCAGGCTTCTAGACAAT+GGG | - | chr2_2:40058203-40058222 | None:intergenic | 55.0% | |
| ! | TCCTTGTAAAGGATGGCGGC+AGG | - | chr2_2:40058218-40058237 | None:intergenic | 55.0% |
| ! | GTTGTTTCCCATCCCCTTGC+AGG | - | chr2_2:40058506-40058525 | None:intergenic | 55.0% |
| AACGGCAGGTGGGAAAGTTG+AGG | + | chr2_2:40059584-40059603 | Msa0250950:CDS | 55.0% | |
| CAACTGTGAGTCCAGAGCCA+GGG | + | chr2_2:40059876-40059895 | Msa0250950:CDS | 55.0% | |
| AACTGTGAGTCCAGAGCCAG+GGG | + | chr2_2:40059877-40059896 | Msa0250950:CDS | 55.0% | |
| TCTTTAGTCTCCCCTGGCTC+TGG | - | chr2_2:40059890-40059909 | None:intergenic | 55.0% | |
| GTGCACAGGCATGCTCATCT+AGG | + | chr2_2:40060234-40060253 | Msa0250950:intron | 55.0% | |
| ATCCAGCAGCAGATCCTGCA+TGG | + | chr2_2:40062745-40062764 | Msa0250950:intron | 55.0% | |
| TCCAGCAGCAGATCCTGCAT+GGG | + | chr2_2:40062746-40062765 | Msa0250950:intron | 55.0% | |
| GTCCATAGCCCGCAGAGTCT+GGG | - | chr2_2:40057633-40057652 | None:intergenic | 60.0% | |
| GGCGGCAGGCTTCTAGACAA+TGG | - | chr2_2:40058204-40058223 | None:intergenic | 60.0% | |
| GCCTGCCGCCATCCTTTACA+AGG | + | chr2_2:40058214-40058233 | Msa0250950:intron | 60.0% | |
| AGTTGCCAGGTAGAAGGGGC+TGG | + | chr2_2:40058554-40058573 | Msa0250950:intron | 60.0% | |
| TCACTCCAGCCCCTTCTACC+TGG | - | chr2_2:40058562-40058581 | None:intergenic | 60.0% | |
| GCAACTGTGAGTCCAGAGCC+AGG | + | chr2_2:40059875-40059894 | Msa0250950:CDS | 60.0% | |
| CCAGCAGCAGATCCTGCATG+GGG | + | chr2_2:40062747-40062766 | Msa0250950:intron | 60.0% | |
| GATGCTCATGCCGTGGTTGC+CGG | + | chr2_2:40063214-40063233 | Msa0250950:CDS | 60.0% | |
| ATGCTCATGCCGTGGTTGCC+GGG | + | chr2_2:40063215-40063234 | Msa0250950:CDS | 60.0% | |
| ! | AGCCCAGACTCTGCGGGCTA+TGG | + | chr2_2:40057628-40057647 | Msa0250950:intron | 65.0% |
| GGTCCATAGCCCGCAGAGTC+TGG | - | chr2_2:40057634-40057653 | None:intergenic | 65.0% | |
| !! | GGATGGCGGACCATGGCGAA+CGG | - | chr2_2:40058132-40058151 | None:intergenic | 65.0% |
| !! | CAATGGCGGATGGCGGACCA+TGG | - | chr2_2:40058139-40058158 | None:intergenic | 65.0% |
| CATGGTCCGCCATCCGCCAT+TGG | + | chr2_2:40058137-40058156 | Msa0250950:intron | 65.0% | |
| CCCCATGCAGGATCTGCTGC+TGG | - | chr2_2:40062750-40062769 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 40056545 | 40063540 | 40056545 | ID=Msa0250950;Name=Msa0250950 |
| chr2_2 | mRNA | 40056545 | 40063540 | 40056545 | ID=Msa0250950-mRNA-1;Parent=Msa0250950;Name=Msa0250950-mRNA-1;_AED=0.19;_eAED=0.19;_QI=297|1|1|1|0.75|0.66|9|228|379 |
| chr2_2 | exon | 40056545 | 40056701 | 40056545 | ID=Msa0250950-mRNA-1:exon:12400;Parent=Msa0250950-mRNA-1 |
| chr2_2 | exon | 40056722 | 40056809 | 40056722 | ID=Msa0250950-mRNA-1:exon:12401;Parent=Msa0250950-mRNA-1 |
| chr2_2 | exon | 40056836 | 40057169 | 40056836 | ID=Msa0250950-mRNA-1:exon:12402;Parent=Msa0250950-mRNA-1 |
| chr2_2 | exon | 40059021 | 40059098 | 40059021 | ID=Msa0250950-mRNA-1:exon:12403;Parent=Msa0250950-mRNA-1 |
| chr2_2 | exon | 40059568 | 40059721 | 40059568 | ID=Msa0250950-mRNA-1:exon:12404;Parent=Msa0250950-mRNA-1 |
| chr2_2 | exon | 40059855 | 40059925 | 40059855 | ID=Msa0250950-mRNA-1:exon:12405;Parent=Msa0250950-mRNA-1 |
| chr2_2 | exon | 40060884 | 40060980 | 40060884 | ID=Msa0250950-mRNA-1:exon:12406;Parent=Msa0250950-mRNA-1 |
| chr2_2 | exon | 40062291 | 40062496 | 40062291 | ID=Msa0250950-mRNA-1:exon:12407;Parent=Msa0250950-mRNA-1 |
| chr2_2 | exon | 40063061 | 40063540 | 40063061 | ID=Msa0250950-mRNA-1:exon:12408;Parent=Msa0250950-mRNA-1 |
| chr2_2 | five_prime_UTR | 40056545 | 40056701 | 40056545 | ID=Msa0250950-mRNA-1:five_prime_utr;Parent=Msa0250950-mRNA-1 |
| chr2_2 | five_prime_UTR | 40056722 | 40056809 | 40056722 | ID=Msa0250950-mRNA-1:five_prime_utr;Parent=Msa0250950-mRNA-1 |
| chr2_2 | five_prime_UTR | 40056836 | 40056887 | 40056836 | ID=Msa0250950-mRNA-1:five_prime_utr;Parent=Msa0250950-mRNA-1 |
| chr2_2 | CDS | 40056888 | 40057169 | 40056888 | ID=Msa0250950-mRNA-1:cds;Parent=Msa0250950-mRNA-1 |
| chr2_2 | CDS | 40059021 | 40059098 | 40059021 | ID=Msa0250950-mRNA-1:cds;Parent=Msa0250950-mRNA-1 |
| chr2_2 | CDS | 40059568 | 40059721 | 40059568 | ID=Msa0250950-mRNA-1:cds;Parent=Msa0250950-mRNA-1 |
| chr2_2 | CDS | 40059855 | 40059925 | 40059855 | ID=Msa0250950-mRNA-1:cds;Parent=Msa0250950-mRNA-1 |
| chr2_2 | CDS | 40060884 | 40060980 | 40060884 | ID=Msa0250950-mRNA-1:cds;Parent=Msa0250950-mRNA-1 |
| chr2_2 | CDS | 40062291 | 40062496 | 40062291 | ID=Msa0250950-mRNA-1:cds;Parent=Msa0250950-mRNA-1 |
| chr2_2 | CDS | 40063061 | 40063312 | 40063061 | ID=Msa0250950-mRNA-1:cds;Parent=Msa0250950-mRNA-1 |
| chr2_2 | three_prime_UTR | 40063313 | 40063540 | 40063313 | ID=Msa0250950-mRNA-1:three_prime_utr;Parent=Msa0250950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
