Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125880 | XP_039685298.1 | 79.698 | 729 | 50 | 10 | 26 | 663 | 1 | 722 | 0.0 | 1001 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125880 | sp|Q9Y222|DMTF1_HUMAN | 29.902 | 204 | 129 | 6 | 436 | 634 | 205 | 399 | 1.70e-14 | 80.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125880 | A0A396GV57 | 75.720 | 729 | 86 | 7 | 26 | 663 | 1 | 729 | 0.0 | 959 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0125880 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa0125880 | 0.828896 | 6.965190e-55 | -8.615850e-47 |
| Msa0020410 | Msa0125880 | 0.807547 | 4.791482e-50 | -8.615850e-47 |
| Msa0020930 | Msa0125880 | 0.801822 | 7.510840e-49 | -8.615850e-47 |
| Msa0022550 | Msa0125880 | 0.829799 | 4.204960e-55 | -8.615850e-47 |
| Msa0026910 | Msa0125880 | 0.816579 | 5.142231e-52 | -8.615850e-47 |
| Msa0030300 | Msa0125880 | 0.801652 | 8.139214e-49 | -8.615850e-47 |
| Msa0031180 | Msa0125880 | 0.806153 | 9.444667e-50 | -8.615850e-47 |
| Msa0031340 | Msa0125880 | 0.806710 | 7.207768e-50 | -8.615850e-47 |
| Msa0032110 | Msa0125880 | 0.808883 | 2.487768e-50 | -8.615850e-47 |
| Msa0032470 | Msa0125880 | 0.839132 | 1.902279e-57 | -8.615850e-47 |
| Msa0036140 | Msa0125880 | 0.806199 | 9.239321e-50 | -8.615850e-47 |
| Msa0038000 | Msa0125880 | 0.834578 | 2.764260e-56 | -8.615850e-47 |
| Msa0038440 | Msa0125880 | 0.809217 | 2.109897e-50 | -8.615850e-47 |
| Msa0040620 | Msa0125880 | 0.811456 | 6.936782e-51 | -8.615850e-47 |
| Msa0043980 | Msa0125880 | 0.808840 | 2.541899e-50 | -8.615850e-47 |
| Msa0045490 | Msa0125880 | 0.835282 | 1.837479e-56 | -8.615850e-47 |
| Msa0068680 | Msa0125880 | 0.812570 | 3.966741e-51 | -8.615850e-47 |
| Msa0078650 | Msa0125880 | 0.800812 | 1.209172e-48 | -8.615850e-47 |
| Msa0083280 | Msa0125880 | 0.831742 | 1.405144e-55 | -8.615850e-47 |
| Msa0084080 | Msa0125880 | 0.818811 | 1.613331e-52 | -8.615850e-47 |
| Msa0085960 | Msa0125880 | 0.819058 | 1.417795e-52 | -8.615850e-47 |
| Msa0086420 | Msa0125880 | 0.808830 | 2.554542e-50 | -8.615850e-47 |
| Msa0090360 | Msa0125880 | 0.835516 | 1.603332e-56 | -8.615850e-47 |
| Msa0095560 | Msa0125880 | 0.806763 | 7.024682e-50 | -8.615850e-47 |
| Msa0097950 | Msa0125880 | 0.805613 | 1.226751e-49 | -8.615850e-47 |
| Msa0100160 | Msa0125880 | 0.816535 | 5.260487e-52 | -8.615850e-47 |
| Msa0109690 | Msa0125880 | 0.803958 | 2.718941e-49 | -8.615850e-47 |
| Msa0114060 | Msa0125880 | 0.804445 | 2.152525e-49 | -8.615850e-47 |
| Msa0116080 | Msa0125880 | 0.814263 | 1.684256e-51 | -8.615850e-47 |
| Msa0120040 | Msa0125880 | -0.825529 | 4.461298e-54 | -8.615850e-47 |
| Msa0125540 | Msa0125880 | 0.801107 | 1.052624e-48 | -8.615850e-47 |
| Msa0125880 | Msa0132830 | 0.801151 | 1.030999e-48 | -8.615850e-47 |
| Msa0125880 | Msa0137840 | 0.831667 | 1.465694e-55 | -8.615850e-47 |
| Msa0125880 | Msa0138500 | 0.806159 | 9.417595e-50 | -8.615850e-47 |
| Msa0125880 | Msa0138750 | 0.824026 | 1.008610e-53 | -8.615850e-47 |
| Msa0125880 | Msa0142950 | 0.839979 | 1.145991e-57 | -8.615850e-47 |
| Msa0125880 | Msa0151180 | 0.800146 | 1.652326e-48 | -8.615850e-47 |
| Msa0125880 | Msa0159930 | 0.811082 | 8.364776e-51 | -8.615850e-47 |
| Msa0125880 | Msa0168870 | 0.830900 | 2.262811e-55 | -8.615850e-47 |
| Msa0125880 | Msa0170570 | 0.906655 | 1.176129e-80 | -8.615850e-47 |
| Msa0125880 | Msa0171120 | 0.817141 | 3.846721e-52 | -8.615850e-47 |
| Msa0125880 | Msa0171290 | 0.808328 | 3.268530e-50 | -8.615850e-47 |
| Msa0125880 | Msa0175540 | 0.838042 | 3.637848e-57 | -8.615850e-47 |
| Msa0125880 | Msa0178570 | 0.811897 | 5.564415e-51 | -8.615850e-47 |
| Msa0125880 | Msa0183050 | 0.854375 | 1.283347e-61 | -8.615850e-47 |
| Msa0125880 | Msa0184040 | 0.837557 | 4.846748e-57 | -8.615850e-47 |
| Msa0125880 | Msa0195630 | 0.806652 | 7.412789e-50 | -8.615850e-47 |
| Msa0125880 | Msa0195980 | 0.808118 | 3.623415e-50 | -8.615850e-47 |
| Msa0125880 | Msa0197610 | 0.806078 | 9.796975e-50 | -8.615850e-47 |
| Msa0125880 | Msa0207030 | 0.809783 | 1.595318e-50 | -8.615850e-47 |
| Msa0125880 | Msa0216240 | 0.860536 | 1.929084e-63 | -8.615850e-47 |
| Msa0125880 | Msa0218350 | 0.831575 | 1.544192e-55 | -8.615850e-47 |
| Msa0125880 | Msa0220580 | 0.815585 | 8.572443e-52 | -8.615850e-47 |
| Msa0125880 | Msa0230680 | 0.817859 | 2.650627e-52 | -8.615850e-47 |
| Msa0125880 | Msa0237200 | 0.832268 | 1.041483e-55 | -8.615850e-47 |
| Msa0125880 | Msa0237410 | 0.810966 | 8.863664e-51 | -8.615850e-47 |
| Msa0125880 | Msa0248520 | 0.804418 | 2.181340e-49 | -8.615850e-47 |
| Msa0125880 | Msa0249200 | 0.807003 | 6.248819e-50 | -8.615850e-47 |
| Msa0125880 | Msa0250950 | 0.806544 | 7.814349e-50 | -8.615850e-47 |
| Msa0125880 | Msa0254790 | 0.819278 | 1.262987e-52 | -8.615850e-47 |
| Msa0125880 | Msa0259430 | 0.813699 | 2.242039e-51 | -8.615850e-47 |
| Msa0125880 | Msa0267920 | 0.803924 | 2.763816e-49 | -8.615850e-47 |
| Msa0125880 | Msa0271810 | 0.823002 | 1.750730e-53 | -8.615850e-47 |
| Msa0125880 | Msa0274970 | 0.824943 | 6.136854e-54 | -8.615850e-47 |
| Msa0125880 | Msa0285330 | 0.838405 | 2.931957e-57 | -8.615850e-47 |
| Msa0125880 | Msa0286670 | 0.812042 | 5.171823e-51 | -8.615850e-47 |
| Msa0125880 | Msa0287410 | 0.822705 | 2.053703e-53 | -8.615850e-47 |
| Msa0125880 | Msa0287650 | 0.818253 | 2.159012e-52 | -8.615850e-47 |
| Msa0125880 | Msa0291500 | 0.838647 | 2.539279e-57 | -8.615850e-47 |
| Msa0125880 | Msa0295590 | 0.802601 | 5.193448e-49 | -8.615850e-47 |
| Msa0125880 | Msa0305610 | 0.811825 | 5.769077e-51 | -8.615850e-47 |
| Msa0125880 | Msa0315680 | 0.824468 | 7.940439e-54 | -8.615850e-47 |
| Msa0125880 | Msa0317730 | 0.834565 | 2.784480e-56 | -8.615850e-47 |
| Msa0125880 | Msa0324240 | 0.845810 | 3.219887e-59 | -8.615850e-47 |
| Msa0125880 | Msa0329350 | 0.819072 | 1.407389e-52 | -8.615850e-47 |
| Msa0125880 | Msa0334360 | 0.847467 | 1.135614e-59 | -8.615850e-47 |
| Msa0125880 | Msa0341540 | 0.801852 | 7.404011e-49 | -8.615850e-47 |
| Msa0125880 | Msa0378970 | 0.834468 | 2.945146e-56 | -8.615850e-47 |
| Msa0125880 | Msa0427040 | 0.808910 | 2.455112e-50 | -8.615850e-47 |
| Msa0125880 | Msa0428580 | 0.811651 | 6.293938e-51 | -8.615850e-47 |
| Msa0125880 | Msa0432500 | 0.803113 | 4.070437e-49 | -8.615850e-47 |
| Msa0125880 | Msa0435220 | 0.800782 | 1.226474e-48 | -8.615850e-47 |
| Msa0125880 | Msa0436760 | 0.818721 | 1.690549e-52 | -8.615850e-47 |
| Msa0125880 | Msa0440750 | 0.800201 | 1.610539e-48 | -8.615850e-47 |
| Msa0125880 | Msa0462390 | 0.842740 | 2.149411e-58 | -8.615850e-47 |
| Msa0125880 | Msa0462430 | 0.834653 | 2.645955e-56 | -8.615850e-47 |
| Msa0125880 | Msa0462480 | 0.839617 | 1.423604e-57 | -8.615850e-47 |
| Msa0125880 | Msa0470690 | 0.800468 | 1.421057e-48 | -8.615850e-47 |
| Msa0125880 | Msa0474940 | 0.813808 | 2.121815e-51 | -8.615850e-47 |
| Msa0125880 | Msa0479170 | 0.817685 | 2.901167e-52 | -8.615850e-47 |
| Msa0125880 | Msa0480780 | 0.807704 | 4.439226e-50 | -8.615850e-47 |
| Msa0125880 | Msa0484720 | 0.807047 | 6.115608e-50 | -8.615850e-47 |
| Msa0125880 | Msa0484780 | 0.810608 | 1.059051e-50 | -8.615850e-47 |
| Msa0125880 | Msa0484840 | 0.835970 | 1.230779e-56 | -8.615850e-47 |
| Msa0125880 | Msa0486130 | 0.817500 | 3.193807e-52 | -8.615850e-47 |
| Msa0125880 | Msa0504780 | 0.817404 | 3.356356e-52 | -8.615850e-47 |
| Msa0125880 | Msa0506830 | 0.821468 | 3.974088e-53 | -8.615850e-47 |
| Msa0125880 | Msa0526020 | 0.808127 | 3.608232e-50 | -8.615850e-47 |
| Msa0125880 | Msa0538910 | 0.836472 | 9.173530e-57 | -8.615850e-47 |
| Msa0125880 | Msa0539410 | 0.807501 | 4.900461e-50 | -8.615850e-47 |
| Msa0125880 | Msa0556860 | 0.806740 | 7.102578e-50 | -8.615850e-47 |
| Msa0125880 | Msa0557320 | 0.832009 | 1.207284e-55 | -8.615850e-47 |
| Msa0125880 | Msa0558230 | 0.834708 | 2.564262e-56 | -8.615850e-47 |
| Msa0125880 | Msa0564130 | 0.870723 | 1.176244e-66 | -8.615850e-47 |
| Msa0125880 | Msa0564140 | 0.817439 | 3.295540e-52 | -8.615850e-47 |
| Msa0125880 | Msa0566310 | 0.809530 | 1.808214e-50 | -8.615850e-47 |
| Msa0125880 | Msa0571780 | 0.801065 | 1.073421e-48 | -8.615850e-47 |
| Msa0125880 | Msa0574390 | 0.821636 | 3.634507e-53 | -8.615850e-47 |
| Msa0125880 | Msa0576680 | 0.803426 | 3.505198e-49 | -8.615850e-47 |
| Msa0125880 | Msa0577500 | 0.809112 | 2.222761e-50 | -8.615850e-47 |
| Msa0125880 | Msa0588090 | 0.801653 | 8.134374e-49 | -8.615850e-47 |
| Msa0125880 | Msa0598160 | 0.802866 | 4.577907e-49 | -8.615850e-47 |
| Msa0125880 | Msa0607580 | 0.804107 | 2.531141e-49 | -8.615850e-47 |
| Msa0125880 | Msa0612960 | 0.852436 | 4.623209e-61 | -8.615850e-47 |
| Msa0125880 | Msa0613090 | 0.807628 | 4.606356e-50 | -8.615850e-47 |
| Msa0125880 | Msa0617660 | 0.806550 | 7.791977e-50 | -8.615850e-47 |
| Msa0125880 | Msa0618950 | 0.802181 | 6.337411e-49 | -8.615850e-47 |
| Msa0125880 | Msa0620230 | 0.835904 | 1.278763e-56 | -8.615850e-47 |
| Msa0125880 | Msa0622120 | 0.801836 | 7.461803e-49 | -8.615850e-47 |
| Msa0125880 | Msa0623990 | 0.803384 | 3.577546e-49 | -8.615850e-47 |
| Msa0125880 | Msa0624060 | 0.834753 | 2.497789e-56 | -8.615850e-47 |
| Msa0125880 | Msa0624470 | 0.813750 | 2.185085e-51 | -8.615850e-47 |
| Msa0125880 | Msa0647930 | 0.800010 | 1.761554e-48 | -8.615850e-47 |
| Msa0125880 | Msa0652690 | 0.814862 | 1.240895e-51 | -8.615850e-47 |
| Msa0125880 | Msa0656960 | 0.861236 | 1.182589e-63 | -8.615850e-47 |
| Msa0125880 | Msa0662340 | 0.812663 | 3.785299e-51 | -8.615850e-47 |
| Msa0125880 | Msa0667050 | 0.810075 | 1.380234e-50 | -8.615850e-47 |
| Msa0125880 | Msa0667790 | 0.809864 | 1.532879e-50 | -8.615850e-47 |
| Msa0125880 | Msa0676130 | 0.833931 | 4.017199e-56 | -8.615850e-47 |
| Msa0125880 | Msa0676180 | 0.834119 | 3.602624e-56 | -8.615850e-47 |
| Msa0125880 | Msa0688480 | 0.800663 | 1.296626e-48 | -8.615850e-47 |
| Msa0125880 | Msa0689250 | 0.824797 | 6.643733e-54 | -8.615850e-47 |
| Msa0125880 | Msa0695130 | 0.802146 | 6.444167e-49 | -8.615850e-47 |
| Msa0125880 | Msa0700650 | 0.805281 | 1.439895e-49 | -8.615850e-47 |
| Msa0125880 | Msa0710270 | 0.825467 | 4.613809e-54 | -8.615850e-47 |
| Msa0125880 | Msa0711100 | 0.804330 | 2.275570e-49 | -8.615850e-47 |
| Msa0125880 | Msa0726080 | 0.828362 | 9.375405e-55 | -8.615850e-47 |
| Msa0125880 | Msa0732600 | 0.809255 | 2.071410e-50 | -8.615850e-47 |
| Msa0125880 | Msa0740510 | 0.849780 | 2.596163e-60 | -8.615850e-47 |
| Msa0125880 | Msa0741440 | 0.804215 | 2.404139e-49 | -8.615850e-47 |
| Msa0125880 | Msa0742750 | 0.819133 | 1.362762e-52 | -8.615850e-47 |
| Msa0125880 | Msa0748430 | 0.979019 | 4.667237e-147 | -8.615850e-47 |
| Msa0125880 | Msa0752700 | 0.818104 | 2.332663e-52 | -8.615850e-47 |
| Msa0125880 | Msa0753990 | -0.806629 | 7.495860e-50 | -8.615850e-47 |
| Msa0125880 | Msa0756540 | 0.825356 | 4.901350e-54 | -8.615850e-47 |
| Msa0125880 | Msa0773590 | 0.833524 | 5.076191e-56 | -8.615850e-47 |
| Msa0125880 | Msa0779690 | 0.803672 | 3.117332e-49 | -8.615850e-47 |
| Msa0125880 | Msa0794970 | 0.823904 | 1.077406e-53 | -8.615850e-47 |
| Msa0125880 | Msa0796440 | 0.859491 | 3.986598e-63 | -8.615850e-47 |
| Msa0125880 | Msa0802010 | 0.812746 | 3.629590e-51 | -8.615850e-47 |
| Msa0125880 | Msa0811040 | 0.820251 | 7.570467e-53 | -8.615850e-47 |
| Msa0125880 | Msa0816590 | 0.830248 | 3.267982e-55 | -8.615850e-47 |
| Msa0125880 | Msa0820770 | 0.851242 | 1.008271e-60 | -8.615850e-47 |
| Msa0125880 | Msa0828680 | 0.811787 | 5.879367e-51 | -8.615850e-47 |
| Msa0125880 | Msa0829220 | 0.809064 | 2.276047e-50 | -8.615850e-47 |
| Msa0125880 | Msa0831100 | 0.820381 | 7.067596e-53 | -8.615850e-47 |
| Msa0125880 | Msa0832150 | 0.808749 | 2.657824e-50 | -8.615850e-47 |
| Msa0125880 | Msa0832340 | 0.812824 | 3.490435e-51 | -8.615850e-47 |
| Msa0125880 | Msa0834260 | 0.809055 | 2.285962e-50 | -8.615850e-47 |
| Msa0125880 | Msa0842790 | 0.808166 | 3.540096e-50 | -8.615850e-47 |
| Msa0125880 | Msa0846230 | 0.828823 | 7.254599e-55 | -8.615850e-47 |
| Msa0125880 | Msa0861090 | 0.851465 | 8.721041e-61 | -8.615850e-47 |
| Msa0125880 | Msa0862320 | 0.804439 | 2.158699e-49 | -8.615850e-47 |
| Msa0125880 | Msa0866400 | 0.824334 | 8.537172e-54 | -8.615850e-47 |
| Msa0125880 | Msa0866410 | 0.827264 | 1.722522e-54 | -8.615850e-47 |
| Msa0125880 | Msa0869100 | 0.830205 | 3.347982e-55 | -8.615850e-47 |
| Msa0125880 | Msa0880450 | 0.836830 | 7.435839e-57 | -8.615850e-47 |
| Msa0125880 | Msa0897080 | 0.811287 | 7.550750e-51 | -8.615850e-47 |
| Msa0125880 | Msa0898750 | 0.817959 | 2.515635e-52 | -8.615850e-47 |
| Msa0125880 | Msa0906690 | 0.843230 | 1.591861e-58 | -8.615850e-47 |
| Msa0125880 | Msa0928130 | 0.822933 | 1.816918e-53 | -8.615850e-47 |
| Msa0125880 | Msa0933230 | 0.851049 | 1.142891e-60 | -8.615850e-47 |
| Msa0125880 | Msa0933310 | 0.848811 | 4.831068e-60 | -8.615850e-47 |
| Msa0125880 | Msa0939000 | 0.842321 | 2.777188e-58 | -8.615850e-47 |
| Msa0125880 | Msa0945240 | 0.808009 | 3.822179e-50 | -8.615850e-47 |
| Msa0125880 | Msa0962840 | 0.807437 | 5.057498e-50 | -8.615850e-47 |
| Msa0125880 | Msa0964310 | 0.813731 | 2.206159e-51 | -8.615850e-47 |
| Msa0125880 | Msa0971090 | 0.849839 | 2.499381e-60 | -8.615850e-47 |
| Msa0125880 | Msa0975940 | 0.809118 | 2.216061e-50 | -8.615850e-47 |
| Msa0125880 | Msa0980880 | 0.831531 | 1.583255e-55 | -8.615850e-47 |
| Msa0125880 | Msa1014420 | 0.801798 | 7.597344e-49 | -8.615850e-47 |
| Msa0125880 | Msa1016910 | 0.804926 | 1.708132e-49 | -8.615850e-47 |
| Msa0125880 | Msa1031770 | 0.813415 | 2.589236e-51 | -8.615850e-47 |
| Msa0125880 | Msa1035960 | 0.816998 | 4.141470e-52 | -8.615850e-47 |
| Msa0125880 | Msa1036300 | 0.837185 | 6.033906e-57 | -8.615850e-47 |
| Msa0125880 | Msa1043390 | 0.815509 | 8.913043e-52 | -8.615850e-47 |
| Msa0125880 | Msa1043450 | 0.818935 | 1.511785e-52 | -8.615850e-47 |
| Msa0125880 | Msa1078170 | 0.808303 | 3.309158e-50 | -8.615850e-47 |
| Msa0125880 | Msa1080160 | 0.816147 | 6.424005e-52 | -8.615850e-47 |
| Msa0125880 | Msa1080270 | 0.814589 | 1.426521e-51 | -8.615850e-47 |
| Msa0125880 | Msa1085200 | 0.801630 | 8.221937e-49 | -8.615850e-47 |
| Msa0125880 | Msa1102770 | 0.813199 | 2.888927e-51 | -8.615850e-47 |
| Msa0125880 | Msa1102790 | 0.811323 | 7.414190e-51 | -8.615850e-47 |
| Msa0125880 | Msa1112390 | 0.823158 | 1.609870e-53 | -8.615850e-47 |
| Msa0125880 | Msa1123380 | 0.801955 | 7.054267e-49 | -8.615850e-47 |
| Msa0125880 | Msa1128330 | 0.820779 | 5.726387e-53 | -8.615850e-47 |
| Msa0125880 | Msa1130530 | 0.817796 | 2.738830e-52 | -8.615850e-47 |
| Msa0125880 | Msa1130980 | 0.828096 | 1.086768e-54 | -8.615850e-47 |
| Msa0125880 | Msa1139890 | 0.815724 | 7.984378e-52 | -8.615850e-47 |
| Msa0125880 | Msa1147970 | 0.806181 | 9.316538e-50 | -8.615850e-47 |
| Msa0125880 | Msa1165920 | 0.802889 | 4.528809e-49 | -8.615850e-47 |
| Msa0125880 | Msa1174850 | 0.819085 | 1.397366e-52 | -8.615850e-47 |
| Msa0125880 | Msa1182670 | 0.809979 | 1.447332e-50 | -8.615850e-47 |
| Msa0125880 | Msa1199570 | 0.823014 | 1.740109e-53 | -8.615850e-47 |
| Msa0125880 | Msa1203050 | 0.819974 | 8.758984e-53 | -8.615850e-47 |
| Msa0125880 | Msa1203100 | 0.841009 | 6.162291e-58 | -8.615850e-47 |
| Msa0125880 | Msa1205370 | 0.820290 | 7.418103e-53 | -8.615850e-47 |
| Msa0125880 | Msa1212950 | 0.833686 | 4.623975e-56 | -8.615850e-47 |
| Msa0125880 | Msa1214890 | 0.823478 | 1.355375e-53 | -8.615850e-47 |
| Msa0125880 | Msa1221060 | 0.807125 | 5.889609e-50 | -8.615850e-47 |
| Msa0125880 | Msa1230040 | 0.883114 | 5.901753e-71 | -8.615850e-47 |
| Msa0125880 | Msa1250290 | 0.818172 | 2.251484e-52 | -8.615850e-47 |
| Msa0125880 | Msa1255330 | 0.822355 | 2.476504e-53 | -8.615850e-47 |
| Msa0125880 | Msa1255370 | 0.842364 | 2.705563e-58 | -8.615850e-47 |
| Msa0125880 | Msa1272600 | 0.854996 | 8.481071e-62 | -8.615850e-47 |
| Msa0125880 | Msa1276660 | 0.818095 | 2.343396e-52 | -8.615850e-47 |
| Msa0125880 | Msa1279400 | 0.803580 | 3.257835e-49 | -8.615850e-47 |
| Msa0125880 | Msa1284550 | 0.801714 | 7.903810e-49 | -8.615850e-47 |
| Msa0125880 | Msa1295910 | 0.895961 | 5.822143e-76 | -8.615850e-47 |
| Msa0125880 | Msa1295950 | 0.807233 | 5.587759e-50 | -8.615850e-47 |
| Msa0125880 | Msa1299950 | 0.823725 | 1.186559e-53 | -8.615850e-47 |
| Msa0125880 | Msa1303240 | 0.803491 | 3.398509e-49 | -8.615850e-47 |
| Msa0125880 | Msa1304940 | 0.815309 | 9.873557e-52 | -8.615850e-47 |
| Msa0125880 | Msa1305660 | 0.831472 | 1.637331e-55 | -8.615850e-47 |
| Msa0125880 | Msa1306840 | 0.810877 | 9.262638e-51 | -8.615850e-47 |
| Msa0125880 | Msa1310450 | 0.840170 | 1.021727e-57 | -8.615850e-47 |
| Msa0125880 | Msa1315750 | 0.808851 | 2.527750e-50 | -8.615850e-47 |
| Msa0125880 | Msa1328640 | 0.804995 | 1.653112e-49 | -8.615850e-47 |
| Msa0125880 | Msa1328710 | 0.831206 | 1.903295e-55 | -8.615850e-47 |
| Msa0125880 | Msa1331320 | 0.821925 | 3.114773e-53 | -8.615850e-47 |
| Msa0125880 | Msa1331350 | 0.807493 | 4.919973e-50 | -8.615850e-47 |
| Msa0125880 | Msa1331910 | 0.822320 | 2.523634e-53 | -8.615850e-47 |
| Msa0125880 | Msa1346730 | 0.829119 | 6.151978e-55 | -8.615850e-47 |
| Msa0125880 | Msa1353980 | 0.846201 | 2.519591e-59 | -8.615850e-47 |
| Msa0125880 | Msa1359560 | 0.804948 | 1.690618e-49 | -8.615850e-47 |
| Msa0125880 | Msa1361400 | 0.803210 | 3.885842e-49 | -8.615850e-47 |
| Msa0125880 | Msa1361410 | 0.815225 | 1.030735e-51 | -8.615850e-47 |
| Msa0125880 | Msa1368430 | 0.814628 | 1.398314e-51 | -8.615850e-47 |
| Msa0125880 | Msa1369000 | 0.804745 | 1.863852e-49 | -8.615850e-47 |
| Msa0125880 | Msa1371640 | 0.846177 | 2.557677e-59 | -8.615850e-47 |
| Msa0125880 | Msa1372240 | 0.801078 | 1.067078e-48 | -8.615850e-47 |
| Msa0125880 | Msa1372290 | 0.801007 | 1.103097e-48 | -8.615850e-47 |
| Msa0125880 | Msa1373460 | 0.803612 | 3.208022e-49 | -8.615850e-47 |
| Msa0125880 | Msa1374470 | 0.802895 | 4.515263e-49 | -8.615850e-47 |
| Msa0125880 | Msa1375840 | 0.806102 | 9.684028e-50 | -8.615850e-47 |
| Msa0125880 | Msa1376200 | 0.837466 | 5.112432e-57 | -8.615850e-47 |
| Msa0125880 | Msa1378410 | 0.833198 | 6.122129e-56 | -8.615850e-47 |
| Msa0125880 | Msa1396870 | 0.810641 | 1.042126e-50 | -8.615850e-47 |
| Msa0125880 | Msa1401990 | 0.841535 | 4.479892e-58 | -8.615850e-47 |
| Msa0125880 | Msa1404300 | 0.832789 | 7.733606e-56 | -8.615850e-47 |
| Msa0125880 | Msa1407190 | 0.807339 | 5.305954e-50 | -8.615850e-47 |
| Msa0125880 | Msa1407580 | 0.805501 | 1.295009e-49 | -8.615850e-47 |
| Msa0125880 | Msa1418340 | 0.829952 | 3.859603e-55 | -8.615850e-47 |
| Msa0125880 | Msa1422580 | 0.801428 | 9.047718e-49 | -8.615850e-47 |
| Msa0125880 | Msa1426570 | 0.813615 | 2.339558e-51 | -8.615850e-47 |
| Msa0125880 | Msa1432130 | 0.811933 | 5.464116e-51 | -8.615850e-47 |
| Msa0125880 | Msa1433390 | 0.837614 | 4.683733e-57 | -8.615850e-47 |
| Msa0125880 | Msa1435770 | 0.821647 | 3.612645e-53 | -8.615850e-47 |
| Msa0125880 | Msa1448490 | 0.804566 | 2.031124e-49 | -8.615850e-47 |
| Msa0125880 | Msa1451160 | 0.823659 | 1.229451e-53 | -8.615850e-47 |
| Msa0125880 | Msa1460020 | 0.807188 | 5.709201e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125880 | MtrunA17_Chr7g0225681 | 75.720 | 729 | 86 | 7 | 26 | 663 | 1 | 729 | 0.0 | 959 |
| Msa0125880 | MtrunA17_Chr8g0373581 | 73.423 | 444 | 29 | 6 | 290 | 663 | 2 | 426 | 0.0 | 610 |
| Msa0125880 | MtrunA17_Chr8g0373591 | 81.413 | 269 | 29 | 5 | 26 | 273 | 1 | 269 | 9.80e-99 | 303 |
| Msa0125880 | MtrunA17_Chr8g0373591 | 62.963 | 135 | 40 | 5 | 181 | 309 | 45 | 175 | 5.71e-20 | 90.5 |
| Msa0125880 | MtrunA17_Chr1g0188151 | 96.739 | 92 | 3 | 0 | 572 | 663 | 1 | 92 | 4.17e-58 | 190 |
| Msa0125880 | MtrunA17_Chr1g0188141 | 84.444 | 90 | 13 | 1 | 26 | 114 | 1 | 90 | 3.15e-30 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125880 | AT5G41020.1 | 55.124 | 283 | 126 | 1 | 378 | 660 | 302 | 583 | 2.25e-112 | 350 |
Find 134 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATAAATTCCAGCTCTTC+AGG | 0.282279 | 1_3:-54679948 | None:intergenic |
| AACAAATGATCCACCATATT+GGG | 0.286872 | 1_3:+54680432 | Msa0125880:CDS |
| GAAGATCAAAGCAGCTGTTT+TGG | 0.293853 | 1_3:+54679743 | Msa0125880:CDS |
| ACATTGCTTTCGGACATATA+TGG | 0.300898 | 1_3:-54678547 | None:intergenic |
| CATTGAGCAGGTGGAAGTTC+TGG | 0.301208 | 1_3:+54680475 | Msa0125880:CDS |
| CCTATGGAAAACCACGTTAA+AGG | 0.302141 | 1_3:-54680575 | None:intergenic |
| GTCACTATACTCCTTAAGTT+TGG | 0.317240 | 1_3:-54679331 | None:intergenic |
| TTGATCTTCTCATCTTCTTC+GGG | 0.322099 | 1_3:-54679729 | None:intergenic |
| TTTGATCTTCTCATCTTCTT+CGG | 0.324153 | 1_3:-54679730 | None:intergenic |
| GAACAAATGATCCACCATAT+TGG | 0.329038 | 1_3:+54680431 | Msa0125880:CDS |
| GATAAACGCTTTATATGCTT+TGG | 0.342448 | 1_3:+54680331 | Msa0125880:CDS |
| TATATAGATTCTCATGGTTT+GGG | 0.357329 | 1_3:+54679768 | Msa0125880:CDS |
| GTATATAGATTCTCATGGTT+TGG | 0.365976 | 1_3:+54679767 | Msa0125880:CDS |
| TTATGTGTGCCTTCTTCACT+TGG | 0.367399 | 1_3:-54679027 | None:intergenic |
| TCATCATCTTCACATTCATT+TGG | 0.373205 | 1_3:-54679261 | None:intergenic |
| GGGAGATGAAGGTCTTGATA+TGG | 0.374391 | 1_3:+54679788 | Msa0125880:CDS |
| GGAGGCAATTGGTCACAAAT+TGG | 0.375244 | 1_3:+54680208 | Msa0125880:CDS |
| TCTCTATCTTTCAACAGGTT+AGG | 0.380269 | 1_3:-54680512 | None:intergenic |
| ACTCCTAACTCTGCACATAA+TGG | 0.384709 | 1_3:+54679618 | Msa0125880:CDS |
| GTTCCATTATGTGCAGAGTT+AGG | 0.391649 | 1_3:-54679621 | None:intergenic |
| GAGGGCAGTAGCCGACGCTT+TGG | 0.393084 | 1_3:+54680001 | Msa0125880:CDS |
| TGGCTGCATGCTCCCCAATA+TGG | 0.395764 | 1_3:-54680445 | None:intergenic |
| AAAATAAACCCATTCAATAT+AGG | 0.398922 | 1_3:-54678428 | None:intergenic |
| CAGATCAGCTACATTGCTTT+CGG | 0.400572 | 1_3:-54678557 | None:intergenic |
| CTCTATCTTTCAACAGGTTA+GGG | 0.404823 | 1_3:-54680511 | None:intergenic |
| CATTGGTTGCTAGTGGTGAT+TGG | 0.407410 | 1_3:+54680285 | Msa0125880:CDS |
| AGGCCTCTCTATCTTTCAAC+AGG | 0.417278 | 1_3:-54680517 | None:intergenic |
| AGAAGCAATGAAGGTGATAA+TGG | 0.417384 | 1_3:+54678784 | Msa0125880:CDS |
| TTCCAACAGCCTCTAACCTC+GGG | 0.421209 | 1_3:-54679831 | None:intergenic |
| GTTTCATTATGTGCACAGTT+AGG | 0.421260 | 1_3:-54679597 | None:intergenic |
| TAGCCCTCTCGAGCAGATCT+AGG | 0.424550 | 1_3:-54680133 | None:intergenic |
| AAAGGGAGGGGAGGTGTAAG+TGG | 0.424706 | 1_3:+54679922 | Msa0125880:CDS |
| GTTGCGAGATAATATTTGTT+GGG | 0.434220 | 1_3:+54680187 | Msa0125880:CDS |
| AAATTACACCCCGAGGTTAG+AGG | 0.442409 | 1_3:+54679822 | Msa0125880:CDS |
| AGGGCAGTAGCCGACGCTTT+GGG | 0.446431 | 1_3:+54680002 | Msa0125880:CDS |
| GCTGCATGGAGGAGGTAGAC+TGG | 0.446516 | 1_3:+54680360 | Msa0125880:CDS |
| CTAAACGCAAACAAGTAACT+TGG | 0.447239 | 1_3:+54679646 | Msa0125880:CDS |
| TGCTCATGCTTTGTTAGAAA+GGG | 0.448940 | 1_3:+54679905 | Msa0125880:CDS |
| GTGCTCATGCTTTGTTAGAA+AGG | 0.460254 | 1_3:+54679904 | Msa0125880:CDS |
| AATATTTGTTGGGAGGCAAT+TGG | 0.463198 | 1_3:+54680197 | Msa0125880:CDS |
| TTTCCAACAGCCTCTAACCT+CGG | 0.465967 | 1_3:-54679832 | None:intergenic |
| ACACTGTAATGAGGCCTCTC+AGG | 0.470045 | 1_3:-54679873 | None:intergenic |
| TGCTTTGGATGCTTGCTGCA+TGG | 0.479442 | 1_3:+54680346 | Msa0125880:CDS |
| TCTCATGGTTTGGGAGATGA+AGG | 0.479659 | 1_3:+54679777 | Msa0125880:CDS |
| TAGAAGCAATGGAGGTGAAG+AGG | 0.481860 | 1_3:+54679158 | Msa0125880:intron |
| ACGGCTTATTGCGTGGGAAA+AGG | 0.484774 | 1_3:+54679700 | Msa0125880:CDS |
| AAGAAGCAGAAATTAATTGA+AGG | 0.487991 | 1_3:+54679108 | Msa0125880:CDS |
| TGTTGCGAGATAATATTTGT+TGG | 0.489321 | 1_3:+54680186 | Msa0125880:CDS |
| GTCAGTGAAGTTAATGATCA+AGG | 0.490585 | 1_3:+54679525 | Msa0125880:CDS |
| GGATGCTTGCTGCATGGAGG+AGG | 0.492182 | 1_3:+54680352 | Msa0125880:CDS |
| AAGAAGAAACCAAGTGAAGA+AGG | 0.493411 | 1_3:+54679018 | Msa0125880:CDS |
| GAGTGAGGAAAGCAAACATA+AGG | 0.496559 | 1_3:+54678843 | Msa0125880:CDS |
| AAGTGAAGAAAGTAAACATA+AGG | 0.498172 | 1_3:+54679221 | Msa0125880:CDS |
| TGAAGGTGATAATGGCGAGC+AGG | 0.499793 | 1_3:+54678792 | Msa0125880:CDS |
| ATAGGTCTGGTGATGTATGC+AGG | 0.510035 | 1_3:+54680399 | Msa0125880:CDS |
| TGTAATGACTTTAGAAGCAA+TGG | 0.511180 | 1_3:+54679147 | Msa0125880:intron |
| AACAACTTTAGAAGCAATGA+AGG | 0.512264 | 1_3:+54678775 | Msa0125880:CDS |
| TAAGTGGACACCTGAAGAGC+TGG | 0.512398 | 1_3:+54679938 | Msa0125880:CDS |
| AATTGAGGAAGCCAAACTTA+AGG | 0.514474 | 1_3:+54679320 | Msa0125880:CDS |
| AGTGACATTATAAGCAATGA+AGG | 0.517478 | 1_3:+54679348 | Msa0125880:CDS |
| ATGTGATGTCCTATATTGAA+TGG | 0.517575 | 1_3:+54678419 | Msa0125880:CDS |
| TTTGGGTAAAAGTCGAGATC+AGG | 0.519802 | 1_3:+54680019 | Msa0125880:CDS |
| GAAGAAGAAGAAACTAATTG+AGG | 0.520193 | 1_3:+54679305 | Msa0125880:CDS |
| AGCCAAGTCATTCATTGAGC+AGG | 0.521908 | 1_3:+54680463 | Msa0125880:CDS |
| AATCTACTTGAGCATAGGTC+TGG | 0.523977 | 1_3:+54680386 | Msa0125880:CDS |
| CTGCATGGAGGAGGTAGACT+GGG | 0.526890 | 1_3:+54680361 | Msa0125880:CDS |
| AAAAGCAATAAAAGTGAAGA+TGG | 0.528970 | 1_3:+54678589 | Msa0125880:CDS |
| CGAGCAATTAACATCAGCAT+TGG | 0.533412 | 1_3:+54680268 | Msa0125880:CDS |
| AAGAAGCGGAAGCTAGTTGA+AGG | 0.534153 | 1_3:+54678733 | Msa0125880:CDS |
| TTGGAGTATATAGATTCTCA+TGG | 0.535104 | 1_3:+54679762 | Msa0125880:CDS |
| AAGTGAAGAAGGCACACATA+AGG | 0.535379 | 1_3:+54679029 | Msa0125880:CDS |
| ACCCCGAGGTTAGAGGCTGT+TGG | 0.535419 | 1_3:+54679829 | Msa0125880:CDS |
| AAAAGTGAAGATGGCGAGCA+AGG | 0.538269 | 1_3:+54678598 | Msa0125880:CDS |
| TGTGATGTCCTATATTGAAT+GGG | 0.542771 | 1_3:+54678420 | Msa0125880:CDS |
| CATATATGGATCACCTCCAT+TGG | 0.545409 | 1_3:-54678533 | None:intergenic |
| CATATAAAGCGTTTATCAAG+CGG | 0.546556 | 1_3:-54680325 | None:intergenic |
| AATCACAGGTTTGTTGTCAA+AGG | 0.550299 | 1_3:-54680537 | None:intergenic |
| ACGAGCAACATGGATCTAGT+TGG | 0.551620 | 1_3:+54679979 | Msa0125880:CDS |
| AACTTGGGCTGATGAGGTGG+AGG | 0.553676 | 1_3:+54679662 | Msa0125880:CDS |
| GTTTATCAAGCGGAAGTCAT+CGG | 0.557461 | 1_3:-54680315 | None:intergenic |
| ACAAGTAACTTGGGCTGATG+AGG | 0.559174 | 1_3:+54679656 | Msa0125880:CDS |
| TGTTGTGACGGCTTATTGCG+TGG | 0.561335 | 1_3:+54679693 | Msa0125880:CDS |
| CGGTTATACACACTGTAATG+AGG | 0.572231 | 1_3:-54679882 | None:intergenic |
| AGAAGCAATGGAGGTGAAGA+GGG | 0.572295 | 1_3:+54679159 | Msa0125880:intron |
| CATGCTTTGTTAGAAAGGGA+GGG | 0.573971 | 1_3:+54679909 | Msa0125880:CDS |
| AGTAACTTGGGCTGATGAGG+TGG | 0.573985 | 1_3:+54679659 | Msa0125880:CDS |
| TCATGCTTTGTTAGAAAGGG+AGG | 0.576855 | 1_3:+54679908 | Msa0125880:CDS |
| TAGAAACCTCAACAAATCAC+AGG | 0.579568 | 1_3:-54680551 | None:intergenic |
| GAAGGTGATAATGGCGAGCA+GGG | 0.580967 | 1_3:+54678793 | Msa0125880:CDS |
| ATGCTTTGTTAGAAAGGGAG+GGG | 0.581640 | 1_3:+54679910 | Msa0125880:CDS |
| CACCTGCTCAATGAATGACT+TGG | 0.584077 | 1_3:-54680465 | None:intergenic |
| AACAAACCTGTGATTTGTTG+AGG | 0.586181 | 1_3:+54680545 | Msa0125880:CDS |
| AGCAACATGGATCTAGTTGG+AGG | 0.586815 | 1_3:+54679982 | Msa0125880:CDS |
| GCGAGATAATATTTGTTGGG+AGG | 0.587211 | 1_3:+54680190 | Msa0125880:CDS |
| GAGGAGAAGTTATGTTGTGA+CGG | 0.589001 | 1_3:+54679681 | Msa0125880:CDS |
| ACATCAGCATTGGTTGCTAG+TGG | 0.590714 | 1_3:+54680278 | Msa0125880:CDS |
| AGAAGCAATGATGATGAAGA+TGG | 0.598793 | 1_3:+54678970 | Msa0125880:CDS |
| GACGACGAGGGTGAAACCAA+TGG | 0.599409 | 1_3:+54678517 | Msa0125880:CDS |
| CTGCATGCTCCCCAATATGG+TGG | 0.600862 | 1_3:-54680442 | None:intergenic |
| TAAACGCAAACAAGTAACTT+GGG | 0.603412 | 1_3:+54679647 | Msa0125880:CDS |
| TGAAGGAAACACACTTGAGG+AGG | 0.607482 | 1_3:+54678750 | Msa0125880:CDS |
| AAACCTAGATCTGCTCGAGA+GGG | 0.608007 | 1_3:+54680130 | Msa0125880:CDS |
| TAAACCTAGATCTGCTCGAG+AGG | 0.609475 | 1_3:+54680129 | Msa0125880:CDS |
| TTGATCATTAACTTCACTGA+CGG | 0.613157 | 1_3:-54679523 | None:intergenic |
| AATTGAAGGAAGCACACTGA+AGG | 0.616212 | 1_3:+54678933 | Msa0125880:CDS |
| GGGACAATCTACTTGAGCAT+AGG | 0.618965 | 1_3:+54680381 | Msa0125880:CDS |
| TAACCTGTTGAAAGATAGAG+AGG | 0.620502 | 1_3:+54680514 | Msa0125880:CDS |
| ACAAATGATCCACCATATTG+GGG | 0.622830 | 1_3:+54680433 | Msa0125880:CDS |
| CAAGTCATTCATTGAGCAGG+TGG | 0.627450 | 1_3:+54680466 | Msa0125880:CDS |
| GAAAAGACCTACGAGCAACA+TGG | 0.630731 | 1_3:+54679969 | Msa0125880:CDS |
| TTTCTAACAAAGCATGAGCA+CGG | 0.633278 | 1_3:-54679902 | None:intergenic |
| GTGATGTATGCAGGAAACGA+TGG | 0.636494 | 1_3:+54680408 | Msa0125880:CDS |
| GTTGTGACGGCTTATTGCGT+GGG | 0.642851 | 1_3:+54679694 | Msa0125880:CDS |
| GCAACATGGATCTAGTTGGA+GGG | 0.643237 | 1_3:+54679983 | Msa0125880:CDS |
| TTTGGATGCTTGCTGCATGG+AGG | 0.643384 | 1_3:+54680349 | Msa0125880:CDS |
| AATGAATGTGAAGATGATGA+TGG | 0.645642 | 1_3:+54679264 | Msa0125880:CDS |
| ACTAGATCCATGTTGCTCGT+AGG | 0.645688 | 1_3:-54679976 | None:intergenic |
| TGATGTATGCAGGAAACGAT+GGG | 0.648956 | 1_3:+54680409 | Msa0125880:CDS |
| GAGATCAGGTAAAAGATGCG+TGG | 0.653330 | 1_3:+54680033 | Msa0125880:CDS |
| GAGGTTTCTAACCTTTAACG+TGG | 0.658433 | 1_3:+54680564 | Msa0125880:exon |
| AATGACTTTAGAAGCAATGG+AGG | 0.658645 | 1_3:+54679150 | Msa0125880:intron |
| CTTTGTTAGAAAGGGAGGGG+AGG | 0.659450 | 1_3:+54679913 | Msa0125880:CDS |
| GAAGGAAACACACTTGAGGA+GGG | 0.660891 | 1_3:+54678751 | Msa0125880:CDS |
| AAAAGGACATTGGTCCCAAG+AGG | 0.666914 | 1_3:+54680082 | Msa0125880:CDS |
| AAATGTCAAATTACACCCCG+AGG | 0.668903 | 1_3:+54679815 | Msa0125880:CDS |
| CAAAAGAACTGAAGACGACG+AGG | 0.676138 | 1_3:+54678504 | Msa0125880:CDS |
| AAATGTGAAGCTGACAACCA+AGG | 0.682713 | 1_3:+54678889 | Msa0125880:intron |
| TGTGAAGATGATGATGGCCA+AGG | 0.683186 | 1_3:+54679270 | Msa0125880:CDS |
| TCCAACAGCCTCTAACCTCG+GGG | 0.692890 | 1_3:-54679830 | None:intergenic |
| AATGATTGTGAAGATGACCA+AGG | 0.698674 | 1_3:+54679072 | Msa0125880:CDS |
| AGTTGAAGGAAACACACTTG+AGG | 0.699110 | 1_3:+54678747 | Msa0125880:CDS |
| AAAAGAACTGAAGACGACGA+GGG | 0.720222 | 1_3:+54678505 | Msa0125880:CDS |
| GAATGTGAAGATGATGACCA+CGG | 0.736913 | 1_3:+54678697 | Msa0125880:CDS |
| GACGAGGGTGAAACCAATGG+AGG | 0.742823 | 1_3:+54678520 | Msa0125880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTTTTGGTATATTTTAAT+CGG | - | chr1_3:54680061-54680080 | None:intergenic | 15.0% |
| !! | AAATATACCAAAACAAAAAA+AGG | + | chr1_3:54680065-54680084 | Msa0125880:CDS | 15.0% |
| !!! | TTGTTTTGGTATATTTTAAT+CGG | - | chr1_3:54680061-54680080 | None:intergenic | 15.0% |
| !! | AAATATACCAAAACAAAAAA+AGG | + | chr1_3:54680065-54680084 | Msa0125880:CDS | 15.0% |
| !! | AAAATAAACCCATTCAATAT+AGG | - | chr1_3:54678431-54678450 | None:intergenic | 20.0% |
| !! | TCACATGTTTATAATACATT+TGG | - | chr1_3:54678405-54678424 | None:intergenic | 20.0% |
| !! | AAAATAAACCCATTCAATAT+AGG | - | chr1_3:54678431-54678450 | None:intergenic | 20.0% |
| !!! | ATCTTCACTTTTATTGCTTT+TGG | - | chr1_3:54678590-54678609 | None:intergenic | 25.0% |
| ! | AAAAGCAATAAAAGTGAAGA+TGG | + | chr1_3:54678589-54678608 | Msa0125880:CDS | 25.0% |
| ! | ATGAAAAAGAAGCTAATTGA+AGG | + | chr1_3:54678919-54678938 | Msa0125880:CDS | 25.0% |
| ! | AAGAAGCAGAAATTAATTGA+AGG | + | chr1_3:54679108-54679127 | Msa0125880:CDS | 25.0% |
| ! | AAGTGAAGAAAGTAAACATA+AGG | + | chr1_3:54679221-54679240 | Msa0125880:CDS | 25.0% |
| ! | TATATAGATTCTCATGGTTT+GGG | + | chr1_3:54679768-54679787 | Msa0125880:CDS | 25.0% |
| !!! | TAAATTTTGATACTCCTCTT+GGG | - | chr1_3:54680099-54680118 | None:intergenic | 25.0% |
| !!! | ATAAATTTTGATACTCCTCT+TGG | - | chr1_3:54680100-54680119 | None:intergenic | 25.0% |
| !!! | CCATGTTGTGATTTTTTATA+AGG | - | chr1_3:54680164-54680183 | None:intergenic | 25.0% |
| ! | CCTTATAAAAAATCACAACA+TGG | + | chr1_3:54680161-54680180 | Msa0125880:CDS | 25.0% |
| !!! | ATCTTCACTTTTATTGCTTT+TGG | - | chr1_3:54678590-54678609 | None:intergenic | 25.0% |
| ! | AAAAGCAATAAAAGTGAAGA+TGG | + | chr1_3:54678589-54678608 | Msa0125880:CDS | 25.0% |
| ! | ATGAAAAAGAAGCTAATTGA+AGG | + | chr1_3:54678919-54678938 | Msa0125880:CDS | 25.0% |
| ! | AAGAAGCAGAAATTAATTGA+AGG | + | chr1_3:54679108-54679127 | Msa0125880:CDS | 25.0% |
| ! | AAGTGAAGAAAGTAAACATA+AGG | + | chr1_3:54679221-54679240 | Msa0125880:CDS | 25.0% |
| ! | TATATAGATTCTCATGGTTT+GGG | + | chr1_3:54679768-54679787 | Msa0125880:CDS | 25.0% |
| !!! | TAAATTTTGATACTCCTCTT+GGG | - | chr1_3:54680099-54680118 | None:intergenic | 25.0% |
| !!! | ATAAATTTTGATACTCCTCT+TGG | - | chr1_3:54680100-54680119 | None:intergenic | 25.0% |
| !!! | CCATGTTGTGATTTTTTATA+AGG | - | chr1_3:54680164-54680183 | None:intergenic | 25.0% |
| ! | CCTTATAAAAAATCACAACA+TGG | + | chr1_3:54680161-54680180 | Msa0125880:CDS | 25.0% |
| ATGTGATGTCCTATATTGAA+TGG | + | chr1_3:54678419-54678438 | Msa0125880:CDS | 30.0% | |
| TGTGATGTCCTATATTGAAT+GGG | + | chr1_3:54678420-54678439 | Msa0125880:CDS | 30.0% | |
| !! | TTATTTTGCAGTCATTGAAG+AGG | + | chr1_3:54678444-54678463 | Msa0125880:CDS | 30.0% |
| ! | TATTTTGCAGTCATTGAAGA+GGG | + | chr1_3:54678445-54678464 | Msa0125880:CDS | 30.0% |
| !!! | GTTCTTTTGTTTTTCTTGCT+CGG | - | chr1_3:54678493-54678512 | None:intergenic | 30.0% |
| !! | CTTTTATTGCTTTTGGTCAA+AGG | - | chr1_3:54678583-54678602 | None:intergenic | 30.0% |
| GAAAGAAGATGAAAAAGAAG+CGG | + | chr1_3:54678719-54678738 | Msa0125880:CDS | 30.0% | |
| ! | AACAACTTTAGAAGCAATGA+AGG | + | chr1_3:54678775-54678794 | Msa0125880:CDS | 30.0% |
| GGGAAAGAAGAAAAAGAAAA+AGG | + | chr1_3:54678813-54678832 | Msa0125880:CDS | 30.0% | |
| GAAAAAGGAAAAATTGAGTG+AGG | + | chr1_3:54678828-54678847 | Msa0125880:CDS | 30.0% | |
| !! | TCTTTTTCATCTTCTTTCCT+TGG | - | chr1_3:54678909-54678928 | None:intergenic | 30.0% |
| !! | TCTTTTTCGTCTTTTTTCCT+TGG | - | chr1_3:54679092-54679111 | None:intergenic | 30.0% |
| ! | TGTAATGACTTTAGAAGCAA+TGG | + | chr1_3:54679147-54679166 | Msa0125880:intron | 30.0% |
| TCATCATCTTCACATTCATT+TGG | - | chr1_3:54678694-54678713 | None:intergenic | 30.0% | |
| AATGAATGTGAAGATGATGA+TGG | + | chr1_3:54678694-54678713 | Msa0125880:CDS | 30.0% | |
| ! | TCTTCTTCATTTTCTTTCCT+TGG | - | chr1_3:54679290-54679309 | None:intergenic | 30.0% |
| GAAGAAGAAGAAACTAATTG+AGG | + | chr1_3:54679305-54679324 | Msa0125880:CDS | 30.0% | |
| AGTGACATTATAAGCAATGA+AGG | + | chr1_3:54679348-54679367 | Msa0125880:CDS | 30.0% | |
| TTGATCATTAACTTCACTGA+CGG | - | chr1_3:54679526-54679545 | None:intergenic | 30.0% | |
| TAAACGCAAACAAGTAACTT+GGG | + | chr1_3:54679647-54679666 | Msa0125880:CDS | 30.0% | |
| TTTGATCTTCTCATCTTCTT+CGG | - | chr1_3:54679733-54679752 | None:intergenic | 30.0% | |
| TTGGAGTATATAGATTCTCA+TGG | + | chr1_3:54679762-54679781 | Msa0125880:CDS | 30.0% | |
| GTATATAGATTCTCATGGTT+TGG | + | chr1_3:54679767-54679786 | Msa0125880:CDS | 30.0% | |
| !!! | CCAATGTCCTTTTTTTGTTT+TGG | - | chr1_3:54680075-54680094 | None:intergenic | 30.0% |
| CCAAAACAAAAAAAGGACAT+TGG | + | chr1_3:54680072-54680091 | Msa0125880:CDS | 30.0% | |
| TGTTGCGAGATAATATTTGT+TGG | + | chr1_3:54680186-54680205 | Msa0125880:CDS | 30.0% | |
| GTTGCGAGATAATATTTGTT+GGG | + | chr1_3:54680187-54680206 | Msa0125880:CDS | 30.0% | |
| ! | CATATAAAGCGTTTATCAAG+CGG | - | chr1_3:54680328-54680347 | None:intergenic | 30.0% |
| GATAAACGCTTTATATGCTT+TGG | + | chr1_3:54680331-54680350 | Msa0125880:CDS | 30.0% | |
| AACAAATGATCCACCATATT+GGG | + | chr1_3:54680432-54680451 | Msa0125880:CDS | 30.0% | |
| ATGTGATGTCCTATATTGAA+TGG | + | chr1_3:54678419-54678438 | Msa0125880:CDS | 30.0% | |
| TGTGATGTCCTATATTGAAT+GGG | + | chr1_3:54678420-54678439 | Msa0125880:CDS | 30.0% | |
| !! | TTATTTTGCAGTCATTGAAG+AGG | + | chr1_3:54678444-54678463 | Msa0125880:CDS | 30.0% |
| ! | TATTTTGCAGTCATTGAAGA+GGG | + | chr1_3:54678445-54678464 | Msa0125880:CDS | 30.0% |
| !!! | GTTCTTTTGTTTTTCTTGCT+CGG | - | chr1_3:54678493-54678512 | None:intergenic | 30.0% |
| !! | CTTTTATTGCTTTTGGTCAA+AGG | - | chr1_3:54678583-54678602 | None:intergenic | 30.0% |
| GAAAGAAGATGAAAAAGAAG+CGG | + | chr1_3:54678719-54678738 | Msa0125880:CDS | 30.0% | |
| ! | AACAACTTTAGAAGCAATGA+AGG | + | chr1_3:54678775-54678794 | Msa0125880:CDS | 30.0% |
| GGGAAAGAAGAAAAAGAAAA+AGG | + | chr1_3:54678813-54678832 | Msa0125880:CDS | 30.0% | |
| GAAAAAGGAAAAATTGAGTG+AGG | + | chr1_3:54678828-54678847 | Msa0125880:CDS | 30.0% | |
| !! | TCTTTTTCATCTTCTTTCCT+TGG | - | chr1_3:54678909-54678928 | None:intergenic | 30.0% |
| !! | TCTTTTTCGTCTTTTTTCCT+TGG | - | chr1_3:54679092-54679111 | None:intergenic | 30.0% |
| ! | TGTAATGACTTTAGAAGCAA+TGG | + | chr1_3:54679147-54679166 | Msa0125880:intron | 30.0% |
| TCATCATCTTCACATTCATT+TGG | - | chr1_3:54678694-54678713 | None:intergenic | 30.0% | |
| AATGAATGTGAAGATGATGA+TGG | + | chr1_3:54678694-54678713 | Msa0125880:CDS | 30.0% | |
| ! | TCTTCTTCATTTTCTTTCCT+TGG | - | chr1_3:54679290-54679309 | None:intergenic | 30.0% |
| GAAGAAGAAGAAACTAATTG+AGG | + | chr1_3:54679305-54679324 | Msa0125880:CDS | 30.0% | |
| AGTGACATTATAAGCAATGA+AGG | + | chr1_3:54679348-54679367 | Msa0125880:CDS | 30.0% | |
| TTGATCATTAACTTCACTGA+CGG | - | chr1_3:54679526-54679545 | None:intergenic | 30.0% | |
| TAAACGCAAACAAGTAACTT+GGG | + | chr1_3:54679647-54679666 | Msa0125880:CDS | 30.0% | |
| TTTGATCTTCTCATCTTCTT+CGG | - | chr1_3:54679733-54679752 | None:intergenic | 30.0% | |
| TTGGAGTATATAGATTCTCA+TGG | + | chr1_3:54679762-54679781 | Msa0125880:CDS | 30.0% | |
| GTATATAGATTCTCATGGTT+TGG | + | chr1_3:54679767-54679786 | Msa0125880:CDS | 30.0% | |
| !!! | CCAATGTCCTTTTTTTGTTT+TGG | - | chr1_3:54680075-54680094 | None:intergenic | 30.0% |
| CCAAAACAAAAAAAGGACAT+TGG | + | chr1_3:54680072-54680091 | Msa0125880:CDS | 30.0% | |
| TGTTGCGAGATAATATTTGT+TGG | + | chr1_3:54680186-54680205 | Msa0125880:CDS | 30.0% | |
| GTTGCGAGATAATATTTGTT+GGG | + | chr1_3:54680187-54680206 | Msa0125880:CDS | 30.0% | |
| ! | CATATAAAGCGTTTATCAAG+CGG | - | chr1_3:54680328-54680347 | None:intergenic | 30.0% |
| GATAAACGCTTTATATGCTT+TGG | + | chr1_3:54680331-54680350 | Msa0125880:CDS | 30.0% | |
| AACAAATGATCCACCATATT+GGG | + | chr1_3:54680432-54680451 | Msa0125880:CDS | 30.0% | |
| ! | ATTTTGCAGTCATTGAAGAG+GGG | + | chr1_3:54678446-54678465 | Msa0125880:CDS | 35.0% |
| ACATTGCTTTCGGACATATA+TGG | - | chr1_3:54678550-54678569 | None:intergenic | 35.0% | |
| !! | TCTTTTTCATCTTCTTTCCG+TGG | - | chr1_3:54678717-54678736 | None:intergenic | 35.0% |
| AGAAGCAATGAAGGTGATAA+TGG | + | chr1_3:54678784-54678803 | Msa0125880:CDS | 35.0% | |
| ! | AGAAGCAATGATGATGAAGA+TGG | + | chr1_3:54678970-54678989 | Msa0125880:CDS | 35.0% |
| AAGAAGAAACCAAGTGAAGA+AGG | + | chr1_3:54679018-54679037 | Msa0125880:CDS | 35.0% | |
| AATGATTGTGAAGATGACCA+AGG | + | chr1_3:54679072-54679091 | Msa0125880:CDS | 35.0% | |
| ! | AATGACTTTAGAAGCAATGG+AGG | + | chr1_3:54679150-54679169 | Msa0125880:intron | 35.0% |
| AATTGAGGAAGCCAAACTTA+AGG | + | chr1_3:54679320-54679339 | Msa0125880:CDS | 35.0% | |
| GTCACTATACTCCTTAAGTT+TGG | - | chr1_3:54679334-54679353 | None:intergenic | 35.0% | |
| GTCACTGAAGTTAATGATGA+AGG | + | chr1_3:54679393-54679412 | Msa0125880:intron | 35.0% | |
| GTCAGTGAAGTTAATGATCA+AGG | + | chr1_3:54679525-54679544 | Msa0125880:CDS | 35.0% | |
| GTTTCATTATGTGCACAGTT+AGG | - | chr1_3:54679600-54679619 | None:intergenic | 35.0% | |
| CTAAACGCAAACAAGTAACT+TGG | + | chr1_3:54679646-54679665 | Msa0125880:CDS | 35.0% | |
| TTGATCTTCTCATCTTCTTC+GGG | - | chr1_3:54679732-54679751 | None:intergenic | 35.0% | |
| TTTCTAACAAAGCATGAGCA+CGG | - | chr1_3:54679905-54679924 | None:intergenic | 35.0% | |
| ! | TGCTCATGCTTTGTTAGAAA+GGG | + | chr1_3:54679905-54679924 | Msa0125880:CDS | 35.0% |
| TCAATAAATTCCAGCTCTTC+AGG | - | chr1_3:54679951-54679970 | None:intergenic | 35.0% | |
| ! | AATATTTGTTGGGAGGCAAT+TGG | + | chr1_3:54680197-54680216 | Msa0125880:CDS | 35.0% |
| GAACAAATGATCCACCATAT+TGG | + | chr1_3:54680431-54680450 | Msa0125880:CDS | 35.0% | |
| ACAAATGATCCACCATATTG+GGG | + | chr1_3:54680433-54680452 | Msa0125880:CDS | 35.0% | |
| CTCTATCTTTCAACAGGTTA+GGG | - | chr1_3:54680514-54680533 | None:intergenic | 35.0% | |
| TCTCTATCTTTCAACAGGTT+AGG | - | chr1_3:54680515-54680534 | None:intergenic | 35.0% | |
| TAACCTGTTGAAAGATAGAG+AGG | + | chr1_3:54680514-54680533 | Msa0125880:CDS | 35.0% | |
| !! | AATCACAGGTTTGTTGTCAA+AGG | - | chr1_3:54680540-54680559 | None:intergenic | 35.0% |
| !! | AACAAACCTGTGATTTGTTG+AGG | + | chr1_3:54680545-54680564 | Msa0125880:CDS | 35.0% |
| TAGAAACCTCAACAAATCAC+AGG | - | chr1_3:54680554-54680573 | None:intergenic | 35.0% | |
| ! | ATTTTGCAGTCATTGAAGAG+GGG | + | chr1_3:54678446-54678465 | Msa0125880:CDS | 35.0% |
| ACATTGCTTTCGGACATATA+TGG | - | chr1_3:54678550-54678569 | None:intergenic | 35.0% | |
| !! | TCTTTTTCATCTTCTTTCCG+TGG | - | chr1_3:54678717-54678736 | None:intergenic | 35.0% |
| AGAAGCAATGAAGGTGATAA+TGG | + | chr1_3:54678784-54678803 | Msa0125880:CDS | 35.0% | |
| ! | AGAAGCAATGATGATGAAGA+TGG | + | chr1_3:54678970-54678989 | Msa0125880:CDS | 35.0% |
| AAGAAGAAACCAAGTGAAGA+AGG | + | chr1_3:54679018-54679037 | Msa0125880:CDS | 35.0% | |
| AATGATTGTGAAGATGACCA+AGG | + | chr1_3:54679072-54679091 | Msa0125880:CDS | 35.0% | |
| ! | AATGACTTTAGAAGCAATGG+AGG | + | chr1_3:54679150-54679169 | Msa0125880:intron | 35.0% |
| AATTGAGGAAGCCAAACTTA+AGG | + | chr1_3:54679320-54679339 | Msa0125880:CDS | 35.0% | |
| GTCACTATACTCCTTAAGTT+TGG | - | chr1_3:54679334-54679353 | None:intergenic | 35.0% | |
| GTCACTGAAGTTAATGATGA+AGG | + | chr1_3:54679393-54679412 | Msa0125880:intron | 35.0% | |
| GTCAGTGAAGTTAATGATCA+AGG | + | chr1_3:54679525-54679544 | Msa0125880:CDS | 35.0% | |
| GTTTCATTATGTGCACAGTT+AGG | - | chr1_3:54679600-54679619 | None:intergenic | 35.0% | |
| CTAAACGCAAACAAGTAACT+TGG | + | chr1_3:54679646-54679665 | Msa0125880:CDS | 35.0% | |
| TTGATCTTCTCATCTTCTTC+GGG | - | chr1_3:54679732-54679751 | None:intergenic | 35.0% | |
| TTTCTAACAAAGCATGAGCA+CGG | - | chr1_3:54679905-54679924 | None:intergenic | 35.0% | |
| ! | TGCTCATGCTTTGTTAGAAA+GGG | + | chr1_3:54679905-54679924 | Msa0125880:CDS | 35.0% |
| TCAATAAATTCCAGCTCTTC+AGG | - | chr1_3:54679951-54679970 | None:intergenic | 35.0% | |
| ! | AATATTTGTTGGGAGGCAAT+TGG | + | chr1_3:54680197-54680216 | Msa0125880:CDS | 35.0% |
| GAACAAATGATCCACCATAT+TGG | + | chr1_3:54680431-54680450 | Msa0125880:CDS | 35.0% | |
| ACAAATGATCCACCATATTG+GGG | + | chr1_3:54680433-54680452 | Msa0125880:CDS | 35.0% | |
| CTCTATCTTTCAACAGGTTA+GGG | - | chr1_3:54680514-54680533 | None:intergenic | 35.0% | |
| TCTCTATCTTTCAACAGGTT+AGG | - | chr1_3:54680515-54680534 | None:intergenic | 35.0% | |
| TAACCTGTTGAAAGATAGAG+AGG | + | chr1_3:54680514-54680533 | Msa0125880:CDS | 35.0% | |
| !! | AATCACAGGTTTGTTGTCAA+AGG | - | chr1_3:54680540-54680559 | None:intergenic | 35.0% |
| !! | AACAAACCTGTGATTTGTTG+AGG | + | chr1_3:54680545-54680564 | Msa0125880:CDS | 35.0% |
| TAGAAACCTCAACAAATCAC+AGG | - | chr1_3:54680554-54680573 | None:intergenic | 35.0% | |
| AAAAGAACTGAAGACGACGA+GGG | + | chr1_3:54678505-54678524 | Msa0125880:CDS | 40.0% | |
| CATATATGGATCACCTCCAT+TGG | - | chr1_3:54678536-54678555 | None:intergenic | 40.0% | |
| CAGATCAGCTACATTGCTTT+CGG | - | chr1_3:54678560-54678579 | None:intergenic | 40.0% | |
| GAATGTGAAGATGATGACCA+CGG | + | chr1_3:54678697-54678716 | Msa0125880:CDS | 40.0% | |
| AGTTGAAGGAAACACACTTG+AGG | + | chr1_3:54678747-54678766 | Msa0125880:CDS | 40.0% | |
| GAGTGAGGAAAGCAAACATA+AGG | + | chr1_3:54678843-54678862 | Msa0125880:CDS | 40.0% | |
| AAATGTGAAGCTGACAACCA+AGG | + | chr1_3:54678889-54678908 | Msa0125880:intron | 40.0% | |
| ! | AATTGAAGGAAGCACACTGA+AGG | + | chr1_3:54678933-54678952 | Msa0125880:CDS | 40.0% |
| TTATGTGTGCCTTCTTCACT+TGG | - | chr1_3:54679030-54679049 | None:intergenic | 40.0% | |
| ! | AAGTGAAGAAGGCACACATA+AGG | + | chr1_3:54679029-54679048 | Msa0125880:CDS | 40.0% |
| GTTTCATTACGTGCACAGTT+AGG | - | chr1_3:54679468-54679487 | None:intergenic | 40.0% | |
| AATGAAACTCCTGGCAATGA+AGG | + | chr1_3:54679480-54679499 | Msa0125880:intron | 40.0% | |
| ACTCCTAACTCTGCACATAA+TGG | + | chr1_3:54679618-54679637 | Msa0125880:CDS | 40.0% | |
| GTTCCATTATGTGCAGAGTT+AGG | - | chr1_3:54679624-54679643 | None:intergenic | 40.0% | |
| GAGGAGAAGTTATGTTGTGA+CGG | + | chr1_3:54679681-54679700 | Msa0125880:CDS | 40.0% | |
| ! | GAAGATCAAAGCAGCTGTTT+TGG | + | chr1_3:54679743-54679762 | Msa0125880:CDS | 40.0% |
| AAATGTCAAATTACACCCCG+AGG | + | chr1_3:54679815-54679834 | Msa0125880:CDS | 40.0% | |
| CGGTTATACACACTGTAATG+AGG | - | chr1_3:54679885-54679904 | None:intergenic | 40.0% | |
| ! | GTGCTCATGCTTTGTTAGAA+AGG | + | chr1_3:54679904-54679923 | Msa0125880:CDS | 40.0% |
| ! | TCATGCTTTGTTAGAAAGGG+AGG | + | chr1_3:54679908-54679927 | Msa0125880:CDS | 40.0% |
| ! | CATGCTTTGTTAGAAAGGGA+GGG | + | chr1_3:54679909-54679928 | Msa0125880:CDS | 40.0% |
| ! | ATGCTTTGTTAGAAAGGGAG+GGG | + | chr1_3:54679910-54679929 | Msa0125880:CDS | 40.0% |
| TTTGGGTAAAAGTCGAGATC+AGG | + | chr1_3:54680019-54680038 | Msa0125880:CDS | 40.0% | |
| ! | GCGAGATAATATTTGTTGGG+AGG | + | chr1_3:54680190-54680209 | Msa0125880:CDS | 40.0% |
| CGAGCAATTAACATCAGCAT+TGG | + | chr1_3:54680268-54680287 | Msa0125880:CDS | 40.0% | |
| GTTTATCAAGCGGAAGTCAT+CGG | - | chr1_3:54680318-54680337 | None:intergenic | 40.0% | |
| AATCTACTTGAGCATAGGTC+TGG | + | chr1_3:54680386-54680405 | Msa0125880:CDS | 40.0% | |
| TGATGTATGCAGGAAACGAT+GGG | + | chr1_3:54680409-54680428 | Msa0125880:CDS | 40.0% | |
| GAGGTTTCTAACCTTTAACG+TGG | + | chr1_3:54680564-54680583 | Msa0125880:exon | 40.0% | |
| AAAAGAACTGAAGACGACGA+GGG | + | chr1_3:54678505-54678524 | Msa0125880:CDS | 40.0% | |
| CATATATGGATCACCTCCAT+TGG | - | chr1_3:54678536-54678555 | None:intergenic | 40.0% | |
| CAGATCAGCTACATTGCTTT+CGG | - | chr1_3:54678560-54678579 | None:intergenic | 40.0% | |
| GAATGTGAAGATGATGACCA+CGG | + | chr1_3:54678697-54678716 | Msa0125880:CDS | 40.0% | |
| AGTTGAAGGAAACACACTTG+AGG | + | chr1_3:54678747-54678766 | Msa0125880:CDS | 40.0% | |
| GAGTGAGGAAAGCAAACATA+AGG | + | chr1_3:54678843-54678862 | Msa0125880:CDS | 40.0% | |
| AAATGTGAAGCTGACAACCA+AGG | + | chr1_3:54678889-54678908 | Msa0125880:intron | 40.0% | |
| ! | AATTGAAGGAAGCACACTGA+AGG | + | chr1_3:54678933-54678952 | Msa0125880:CDS | 40.0% |
| TTATGTGTGCCTTCTTCACT+TGG | - | chr1_3:54679030-54679049 | None:intergenic | 40.0% | |
| ! | AAGTGAAGAAGGCACACATA+AGG | + | chr1_3:54679029-54679048 | Msa0125880:CDS | 40.0% |
| GTTTCATTACGTGCACAGTT+AGG | - | chr1_3:54679468-54679487 | None:intergenic | 40.0% | |
| AATGAAACTCCTGGCAATGA+AGG | + | chr1_3:54679480-54679499 | Msa0125880:intron | 40.0% | |
| ACTCCTAACTCTGCACATAA+TGG | + | chr1_3:54679618-54679637 | Msa0125880:CDS | 40.0% | |
| GTTCCATTATGTGCAGAGTT+AGG | - | chr1_3:54679624-54679643 | None:intergenic | 40.0% | |
| GAGGAGAAGTTATGTTGTGA+CGG | + | chr1_3:54679681-54679700 | Msa0125880:CDS | 40.0% | |
| ! | GAAGATCAAAGCAGCTGTTT+TGG | + | chr1_3:54679743-54679762 | Msa0125880:CDS | 40.0% |
| AAATGTCAAATTACACCCCG+AGG | + | chr1_3:54679815-54679834 | Msa0125880:CDS | 40.0% | |
| CGGTTATACACACTGTAATG+AGG | - | chr1_3:54679885-54679904 | None:intergenic | 40.0% | |
| ! | GTGCTCATGCTTTGTTAGAA+AGG | + | chr1_3:54679904-54679923 | Msa0125880:CDS | 40.0% |
| ! | TCATGCTTTGTTAGAAAGGG+AGG | + | chr1_3:54679908-54679927 | Msa0125880:CDS | 40.0% |
| ! | CATGCTTTGTTAGAAAGGGA+GGG | + | chr1_3:54679909-54679928 | Msa0125880:CDS | 40.0% |
| ! | ATGCTTTGTTAGAAAGGGAG+GGG | + | chr1_3:54679910-54679929 | Msa0125880:CDS | 40.0% |
| TTTGGGTAAAAGTCGAGATC+AGG | + | chr1_3:54680019-54680038 | Msa0125880:CDS | 40.0% | |
| ! | GCGAGATAATATTTGTTGGG+AGG | + | chr1_3:54680190-54680209 | Msa0125880:CDS | 40.0% |
| CGAGCAATTAACATCAGCAT+TGG | + | chr1_3:54680268-54680287 | Msa0125880:CDS | 40.0% | |
| GTTTATCAAGCGGAAGTCAT+CGG | - | chr1_3:54680318-54680337 | None:intergenic | 40.0% | |
| AATCTACTTGAGCATAGGTC+TGG | + | chr1_3:54680386-54680405 | Msa0125880:CDS | 40.0% | |
| TGATGTATGCAGGAAACGAT+GGG | + | chr1_3:54680409-54680428 | Msa0125880:CDS | 40.0% | |
| GAGGTTTCTAACCTTTAACG+TGG | + | chr1_3:54680564-54680583 | Msa0125880:exon | 40.0% | |
| CAAAAGAACTGAAGACGACG+AGG | + | chr1_3:54678504-54678523 | Msa0125880:CDS | 45.0% | |
| AAAAGTGAAGATGGCGAGCA+AGG | + | chr1_3:54678598-54678617 | Msa0125880:CDS | 45.0% | |
| AAGAAGCGGAAGCTAGTTGA+AGG | + | chr1_3:54678733-54678752 | Msa0125880:CDS | 45.0% | |
| TGAAGGAAACACACTTGAGG+AGG | + | chr1_3:54678750-54678769 | Msa0125880:CDS | 45.0% | |
| GAAGGAAACACACTTGAGGA+GGG | + | chr1_3:54678751-54678770 | Msa0125880:CDS | 45.0% | |
| TAGAAGCAATGGAGGTGAAG+AGG | + | chr1_3:54679158-54679177 | Msa0125880:intron | 45.0% | |
| AGAAGCAATGGAGGTGAAGA+GGG | + | chr1_3:54679159-54679178 | Msa0125880:intron | 45.0% | |
| !! | TGTGAAGATGATGATGGCCA+AGG | + | chr1_3:54679270-54679289 | Msa0125880:CDS | 45.0% |
| TGTGCACGTAATGAAACTCC+TGG | + | chr1_3:54679471-54679490 | Msa0125880:intron | 45.0% | |
| ACAAGTAACTTGGGCTGATG+AGG | + | chr1_3:54679656-54679675 | Msa0125880:CDS | 45.0% | |
| ! | TCTCATGGTTTGGGAGATGA+AGG | + | chr1_3:54679777-54679796 | Msa0125880:CDS | 45.0% |
| GGGAGATGAAGGTCTTGATA+TGG | + | chr1_3:54679788-54679807 | Msa0125880:CDS | 45.0% | |
| AAATTACACCCCGAGGTTAG+AGG | + | chr1_3:54679822-54679841 | Msa0125880:CDS | 45.0% | |
| TTTCCAACAGCCTCTAACCT+CGG | - | chr1_3:54679835-54679854 | None:intergenic | 45.0% | |
| ! | TCGCAAAAAGCATACCTGAG+AGG | + | chr1_3:54679859-54679878 | Msa0125880:CDS | 45.0% |
| GAAAAGACCTACGAGCAACA+TGG | + | chr1_3:54679969-54679988 | Msa0125880:CDS | 45.0% | |
| ACTAGATCCATGTTGCTCGT+AGG | - | chr1_3:54679979-54679998 | None:intergenic | 45.0% | |
| ACGAGCAACATGGATCTAGT+TGG | + | chr1_3:54679979-54679998 | Msa0125880:CDS | 45.0% | |
| AGCAACATGGATCTAGTTGG+AGG | + | chr1_3:54679982-54680001 | Msa0125880:CDS | 45.0% | |
| GCAACATGGATCTAGTTGGA+GGG | + | chr1_3:54679983-54680002 | Msa0125880:CDS | 45.0% | |
| ! | TCGACTTTTACCCAAAGCGT+CGG | - | chr1_3:54680015-54680034 | None:intergenic | 45.0% |
| GAGATCAGGTAAAAGATGCG+TGG | + | chr1_3:54680033-54680052 | Msa0125880:CDS | 45.0% | |
| AAAAGGACATTGGTCCCAAG+AGG | + | chr1_3:54680082-54680101 | Msa0125880:CDS | 45.0% | |
| TAAACCTAGATCTGCTCGAG+AGG | + | chr1_3:54680129-54680148 | Msa0125880:CDS | 45.0% | |
| AAACCTAGATCTGCTCGAGA+GGG | + | chr1_3:54680130-54680149 | Msa0125880:CDS | 45.0% | |
| GGAGGCAATTGGTCACAAAT+TGG | + | chr1_3:54680208-54680227 | Msa0125880:CDS | 45.0% | |
| ! | GTGCATTTTGCTGCAAGAAG+TGG | + | chr1_3:54680243-54680262 | Msa0125880:CDS | 45.0% |
| !! | ACATCAGCATTGGTTGCTAG+TGG | + | chr1_3:54680278-54680297 | Msa0125880:CDS | 45.0% |
| ! | CATTGGTTGCTAGTGGTGAT+TGG | + | chr1_3:54680285-54680304 | Msa0125880:CDS | 45.0% |
| GGGACAATCTACTTGAGCAT+AGG | + | chr1_3:54680381-54680400 | Msa0125880:CDS | 45.0% | |
| ! | ATAGGTCTGGTGATGTATGC+AGG | + | chr1_3:54680399-54680418 | Msa0125880:CDS | 45.0% |
| GTGATGTATGCAGGAAACGA+TGG | + | chr1_3:54680408-54680427 | Msa0125880:CDS | 45.0% | |
| AGCCAAGTCATTCATTGAGC+AGG | + | chr1_3:54680463-54680482 | Msa0125880:CDS | 45.0% | |
| CACCTGCTCAATGAATGACT+TGG | - | chr1_3:54680468-54680487 | None:intergenic | 45.0% | |
| CAAGTCATTCATTGAGCAGG+TGG | + | chr1_3:54680466-54680485 | Msa0125880:CDS | 45.0% | |
| AGGCCTCTCTATCTTTCAAC+AGG | - | chr1_3:54680520-54680539 | None:intergenic | 45.0% | |
| CAAAAGAACTGAAGACGACG+AGG | + | chr1_3:54678504-54678523 | Msa0125880:CDS | 45.0% | |
| AAAAGTGAAGATGGCGAGCA+AGG | + | chr1_3:54678598-54678617 | Msa0125880:CDS | 45.0% | |
| AAGAAGCGGAAGCTAGTTGA+AGG | + | chr1_3:54678733-54678752 | Msa0125880:CDS | 45.0% | |
| TGAAGGAAACACACTTGAGG+AGG | + | chr1_3:54678750-54678769 | Msa0125880:CDS | 45.0% | |
| GAAGGAAACACACTTGAGGA+GGG | + | chr1_3:54678751-54678770 | Msa0125880:CDS | 45.0% | |
| TAGAAGCAATGGAGGTGAAG+AGG | + | chr1_3:54679158-54679177 | Msa0125880:intron | 45.0% | |
| AGAAGCAATGGAGGTGAAGA+GGG | + | chr1_3:54679159-54679178 | Msa0125880:intron | 45.0% | |
| !! | TGTGAAGATGATGATGGCCA+AGG | + | chr1_3:54679270-54679289 | Msa0125880:CDS | 45.0% |
| TGTGCACGTAATGAAACTCC+TGG | + | chr1_3:54679471-54679490 | Msa0125880:intron | 45.0% | |
| ACAAGTAACTTGGGCTGATG+AGG | + | chr1_3:54679656-54679675 | Msa0125880:CDS | 45.0% | |
| ! | TCTCATGGTTTGGGAGATGA+AGG | + | chr1_3:54679777-54679796 | Msa0125880:CDS | 45.0% |
| GGGAGATGAAGGTCTTGATA+TGG | + | chr1_3:54679788-54679807 | Msa0125880:CDS | 45.0% | |
| AAATTACACCCCGAGGTTAG+AGG | + | chr1_3:54679822-54679841 | Msa0125880:CDS | 45.0% | |
| TTTCCAACAGCCTCTAACCT+CGG | - | chr1_3:54679835-54679854 | None:intergenic | 45.0% | |
| ! | TCGCAAAAAGCATACCTGAG+AGG | + | chr1_3:54679859-54679878 | Msa0125880:CDS | 45.0% |
| GAAAAGACCTACGAGCAACA+TGG | + | chr1_3:54679969-54679988 | Msa0125880:CDS | 45.0% | |
| ACTAGATCCATGTTGCTCGT+AGG | - | chr1_3:54679979-54679998 | None:intergenic | 45.0% | |
| ACGAGCAACATGGATCTAGT+TGG | + | chr1_3:54679979-54679998 | Msa0125880:CDS | 45.0% | |
| AGCAACATGGATCTAGTTGG+AGG | + | chr1_3:54679982-54680001 | Msa0125880:CDS | 45.0% | |
| GCAACATGGATCTAGTTGGA+GGG | + | chr1_3:54679983-54680002 | Msa0125880:CDS | 45.0% | |
| ! | TCGACTTTTACCCAAAGCGT+CGG | - | chr1_3:54680015-54680034 | None:intergenic | 45.0% |
| GAGATCAGGTAAAAGATGCG+TGG | + | chr1_3:54680033-54680052 | Msa0125880:CDS | 45.0% | |
| AAAAGGACATTGGTCCCAAG+AGG | + | chr1_3:54680082-54680101 | Msa0125880:CDS | 45.0% | |
| TAAACCTAGATCTGCTCGAG+AGG | + | chr1_3:54680129-54680148 | Msa0125880:CDS | 45.0% | |
| AAACCTAGATCTGCTCGAGA+GGG | + | chr1_3:54680130-54680149 | Msa0125880:CDS | 45.0% | |
| GGAGGCAATTGGTCACAAAT+TGG | + | chr1_3:54680208-54680227 | Msa0125880:CDS | 45.0% | |
| ! | GTGCATTTTGCTGCAAGAAG+TGG | + | chr1_3:54680243-54680262 | Msa0125880:CDS | 45.0% |
| !! | ACATCAGCATTGGTTGCTAG+TGG | + | chr1_3:54680278-54680297 | Msa0125880:CDS | 45.0% |
| ! | CATTGGTTGCTAGTGGTGAT+TGG | + | chr1_3:54680285-54680304 | Msa0125880:CDS | 45.0% |
| GGGACAATCTACTTGAGCAT+AGG | + | chr1_3:54680381-54680400 | Msa0125880:CDS | 45.0% | |
| ! | ATAGGTCTGGTGATGTATGC+AGG | + | chr1_3:54680399-54680418 | Msa0125880:CDS | 45.0% |
| GTGATGTATGCAGGAAACGA+TGG | + | chr1_3:54680408-54680427 | Msa0125880:CDS | 45.0% | |
| AGCCAAGTCATTCATTGAGC+AGG | + | chr1_3:54680463-54680482 | Msa0125880:CDS | 45.0% | |
| CACCTGCTCAATGAATGACT+TGG | - | chr1_3:54680468-54680487 | None:intergenic | 45.0% | |
| CAAGTCATTCATTGAGCAGG+TGG | + | chr1_3:54680466-54680485 | Msa0125880:CDS | 45.0% | |
| AGGCCTCTCTATCTTTCAAC+AGG | - | chr1_3:54680520-54680539 | None:intergenic | 45.0% | |
| !! | TGAAGGTGATAATGGCGAGC+AGG | + | chr1_3:54678792-54678811 | Msa0125880:CDS | 50.0% |
| !! | GAAGGTGATAATGGCGAGCA+GGG | + | chr1_3:54678793-54678812 | Msa0125880:CDS | 50.0% |
| TCAGCATCACCTTCATTGCC+AGG | - | chr1_3:54679492-54679511 | None:intergenic | 50.0% | |
| AGTAACTTGGGCTGATGAGG+TGG | + | chr1_3:54679659-54679678 | Msa0125880:CDS | 50.0% | |
| TGTTGTGACGGCTTATTGCG+TGG | + | chr1_3:54679693-54679712 | Msa0125880:CDS | 50.0% | |
| GTTGTGACGGCTTATTGCGT+GGG | + | chr1_3:54679694-54679713 | Msa0125880:CDS | 50.0% | |
| ACGGCTTATTGCGTGGGAAA+AGG | + | chr1_3:54679700-54679719 | Msa0125880:CDS | 50.0% | |
| TTCCAACAGCCTCTAACCTC+GGG | - | chr1_3:54679834-54679853 | None:intergenic | 50.0% | |
| ACACTGTAATGAGGCCTCTC+AGG | - | chr1_3:54679876-54679895 | None:intergenic | 50.0% | |
| CTTTGTTAGAAAGGGAGGGG+AGG | + | chr1_3:54679913-54679932 | Msa0125880:CDS | 50.0% | |
| TAAGTGGACACCTGAAGAGC+TGG | + | chr1_3:54679938-54679957 | Msa0125880:CDS | 50.0% | |
| ! | TGCTTTGGATGCTTGCTGCA+TGG | + | chr1_3:54680346-54680365 | Msa0125880:CDS | 50.0% |
| ! | TTTGGATGCTTGCTGCATGG+AGG | + | chr1_3:54680349-54680368 | Msa0125880:CDS | 50.0% |
| CATTGAGCAGGTGGAAGTTC+TGG | + | chr1_3:54680475-54680494 | Msa0125880:CDS | 50.0% | |
| !! | TGAAGGTGATAATGGCGAGC+AGG | + | chr1_3:54678792-54678811 | Msa0125880:CDS | 50.0% |
| !! | GAAGGTGATAATGGCGAGCA+GGG | + | chr1_3:54678793-54678812 | Msa0125880:CDS | 50.0% |
| TCAGCATCACCTTCATTGCC+AGG | - | chr1_3:54679492-54679511 | None:intergenic | 50.0% | |
| AGTAACTTGGGCTGATGAGG+TGG | + | chr1_3:54679659-54679678 | Msa0125880:CDS | 50.0% | |
| TGTTGTGACGGCTTATTGCG+TGG | + | chr1_3:54679693-54679712 | Msa0125880:CDS | 50.0% | |
| GTTGTGACGGCTTATTGCGT+GGG | + | chr1_3:54679694-54679713 | Msa0125880:CDS | 50.0% | |
| ACGGCTTATTGCGTGGGAAA+AGG | + | chr1_3:54679700-54679719 | Msa0125880:CDS | 50.0% | |
| TTCCAACAGCCTCTAACCTC+GGG | - | chr1_3:54679834-54679853 | None:intergenic | 50.0% | |
| ACACTGTAATGAGGCCTCTC+AGG | - | chr1_3:54679876-54679895 | None:intergenic | 50.0% | |
| CTTTGTTAGAAAGGGAGGGG+AGG | + | chr1_3:54679913-54679932 | Msa0125880:CDS | 50.0% | |
| TAAGTGGACACCTGAAGAGC+TGG | + | chr1_3:54679938-54679957 | Msa0125880:CDS | 50.0% | |
| ! | TGCTTTGGATGCTTGCTGCA+TGG | + | chr1_3:54680346-54680365 | Msa0125880:CDS | 50.0% |
| ! | TTTGGATGCTTGCTGCATGG+AGG | + | chr1_3:54680349-54680368 | Msa0125880:CDS | 50.0% |
| CATTGAGCAGGTGGAAGTTC+TGG | + | chr1_3:54680475-54680494 | Msa0125880:CDS | 50.0% | |
| GACGACGAGGGTGAAACCAA+TGG | + | chr1_3:54678517-54678536 | Msa0125880:CDS | 55.0% | |
| GACGAGGGTGAAACCAATGG+AGG | + | chr1_3:54678520-54678539 | Msa0125880:CDS | 55.0% | |
| AACTTGGGCTGATGAGGTGG+AGG | + | chr1_3:54679662-54679681 | Msa0125880:CDS | 55.0% | |
| TCCAACAGCCTCTAACCTCG+GGG | - | chr1_3:54679833-54679852 | None:intergenic | 55.0% | |
| ! | AAAGGGAGGGGAGGTGTAAG+TGG | + | chr1_3:54679922-54679941 | Msa0125880:CDS | 55.0% |
| TAGCCCTCTCGAGCAGATCT+AGG | - | chr1_3:54680136-54680155 | None:intergenic | 55.0% | |
| CTGCATGGAGGAGGTAGACT+GGG | + | chr1_3:54680361-54680380 | Msa0125880:CDS | 55.0% | |
| CTGCATGCTCCCCAATATGG+TGG | - | chr1_3:54680445-54680464 | None:intergenic | 55.0% | |
| TGGCTGCATGCTCCCCAATA+TGG | - | chr1_3:54680448-54680467 | None:intergenic | 55.0% | |
| GACGACGAGGGTGAAACCAA+TGG | + | chr1_3:54678517-54678536 | Msa0125880:CDS | 55.0% | |
| GACGAGGGTGAAACCAATGG+AGG | + | chr1_3:54678520-54678539 | Msa0125880:CDS | 55.0% | |
| AACTTGGGCTGATGAGGTGG+AGG | + | chr1_3:54679662-54679681 | Msa0125880:CDS | 55.0% | |
| TCCAACAGCCTCTAACCTCG+GGG | - | chr1_3:54679833-54679852 | None:intergenic | 55.0% | |
| ! | AAAGGGAGGGGAGGTGTAAG+TGG | + | chr1_3:54679922-54679941 | Msa0125880:CDS | 55.0% |
| TAGCCCTCTCGAGCAGATCT+AGG | - | chr1_3:54680136-54680155 | None:intergenic | 55.0% | |
| CTGCATGGAGGAGGTAGACT+GGG | + | chr1_3:54680361-54680380 | Msa0125880:CDS | 55.0% | |
| CTGCATGCTCCCCAATATGG+TGG | - | chr1_3:54680445-54680464 | None:intergenic | 55.0% | |
| TGGCTGCATGCTCCCCAATA+TGG | - | chr1_3:54680448-54680467 | None:intergenic | 55.0% | |
| ACCCCGAGGTTAGAGGCTGT+TGG | + | chr1_3:54679829-54679848 | Msa0125880:CDS | 60.0% | |
| AGGGCAGTAGCCGACGCTTT+GGG | + | chr1_3:54680002-54680021 | Msa0125880:CDS | 60.0% | |
| ! | GGATGCTTGCTGCATGGAGG+AGG | + | chr1_3:54680352-54680371 | Msa0125880:CDS | 60.0% |
| GCTGCATGGAGGAGGTAGAC+TGG | + | chr1_3:54680360-54680379 | Msa0125880:CDS | 60.0% | |
| ACCCCGAGGTTAGAGGCTGT+TGG | + | chr1_3:54679829-54679848 | Msa0125880:CDS | 60.0% | |
| AGGGCAGTAGCCGACGCTTT+GGG | + | chr1_3:54680002-54680021 | Msa0125880:CDS | 60.0% | |
| ! | GGATGCTTGCTGCATGGAGG+AGG | + | chr1_3:54680352-54680371 | Msa0125880:CDS | 60.0% |
| GCTGCATGGAGGAGGTAGAC+TGG | + | chr1_3:54680360-54680379 | Msa0125880:CDS | 60.0% | |
| GAGGGCAGTAGCCGACGCTT+TGG | + | chr1_3:54680001-54680020 | Msa0125880:CDS | 65.0% | |
| GAGGGCAGTAGCCGACGCTT+TGG | + | chr1_3:54680001-54680020 | Msa0125880:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 54678404 | 54680592 | 54678404 | ID=Msa0125880;Name=Msa0125880 |
| chr1_3 | mRNA | 54678404 | 54680592 | 54678404 | ID=Msa0125880-mRNA-1;Parent=Msa0125880;Name=Msa0125880-mRNA-1;_AED=0.04;_eAED=0.04;_QI=2|0.25|0.2|1|0|0|5|27|663 |
| chr1_3 | exon | 54678404 | 54678652 | 54678404 | ID=Msa0125880-mRNA-1:exon:16855;Parent=Msa0125880-mRNA-1 |
| chr1_3 | exon | 54678659 | 54678883 | 54678659 | ID=Msa0125880-mRNA-1:exon:16856;Parent=Msa0125880-mRNA-1 |
| chr1_3 | exon | 54678899 | 54679145 | 54678899 | ID=Msa0125880-mRNA-1:exon:16857;Parent=Msa0125880-mRNA-1 |
| chr1_3 | exon | 54679161 | 54679369 | 54679161 | ID=Msa0125880-mRNA-1:exon:16858;Parent=Msa0125880-mRNA-1 |
| chr1_3 | exon | 54679502 | 54680592 | 54679502 | ID=Msa0125880-mRNA-1:exon:16859;Parent=Msa0125880-mRNA-1 |
| chr1_3 | five_prime_UTR | 54678404 | 54678405 | 54678404 | ID=Msa0125880-mRNA-1:five_prime_utr;Parent=Msa0125880-mRNA-1 |
| chr1_3 | CDS | 54678406 | 54678652 | 54678406 | ID=Msa0125880-mRNA-1:cds;Parent=Msa0125880-mRNA-1 |
| chr1_3 | CDS | 54678659 | 54678883 | 54678659 | ID=Msa0125880-mRNA-1:cds;Parent=Msa0125880-mRNA-1 |
| chr1_3 | CDS | 54678899 | 54679145 | 54678899 | ID=Msa0125880-mRNA-1:cds;Parent=Msa0125880-mRNA-1 |
| chr1_3 | CDS | 54679161 | 54679369 | 54679161 | ID=Msa0125880-mRNA-1:cds;Parent=Msa0125880-mRNA-1 |
| chr1_3 | CDS | 54679502 | 54680565 | 54679502 | ID=Msa0125880-mRNA-1:cds;Parent=Msa0125880-mRNA-1 |
| chr1_3 | three_prime_UTR | 54680566 | 54680592 | 54680566 | ID=Msa0125880-mRNA-1:three_prime_utr;Parent=Msa0125880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
