Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0385620 | XP_003603819.2 | 92.473 | 465 | 16 | 3 | 17 | 471 | 1 | 456 | 0.0 | 848 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0385620 | sp|Q3ECD0|PUS2_ARATH | 65.385 | 390 | 110 | 4 | 69 | 455 | 62 | 429 | 1.24e-174 | 499 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0385620 | G7J5V2 | 92.473 | 465 | 16 | 3 | 17 | 471 | 1 | 456 | 0.0 | 848 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001460 | Msa0385620 | 0.800748 | 1.246231e-48 | -8.615850e-47 |
| Msa0052550 | Msa0385620 | 0.819233 | 1.293509e-52 | -8.615850e-47 |
| Msa0054760 | Msa0385620 | 0.829092 | 6.246582e-55 | -8.615850e-47 |
| Msa0057740 | Msa0385620 | 0.807852 | 4.127824e-50 | -8.615850e-47 |
| Msa0061320 | Msa0385620 | 0.813632 | 2.319708e-51 | -8.615850e-47 |
| Msa0062750 | Msa0385620 | 0.807214 | 5.638225e-50 | -8.615850e-47 |
| Msa0089510 | Msa0385620 | 0.807834 | 4.165660e-50 | -8.615850e-47 |
| Msa0089520 | Msa0385620 | 0.807378 | 5.203843e-50 | -8.615850e-47 |
| Msa0091550 | Msa0385620 | 0.805636 | 1.213384e-49 | -8.615850e-47 |
| Msa0103060 | Msa0385620 | 0.810395 | 1.177741e-50 | -8.615850e-47 |
| Msa0104190 | Msa0385620 | 0.800075 | 1.708380e-48 | -8.615850e-47 |
| Msa0115010 | Msa0385620 | 0.812408 | 4.304930e-51 | -8.615850e-47 |
| Msa0116260 | Msa0385620 | 0.802786 | 4.755334e-49 | -8.615850e-47 |
| Msa0131390 | Msa0385620 | 0.800004 | 1.766024e-48 | -8.615850e-47 |
| Msa0152380 | Msa0385620 | 0.803496 | 3.390835e-49 | -8.615850e-47 |
| Msa0153640 | Msa0385620 | 0.811978 | 5.341601e-51 | -8.615850e-47 |
| Msa0178940 | Msa0385620 | 0.819303 | 1.246773e-52 | -8.615850e-47 |
| Msa0222070 | Msa0385620 | 0.803984 | 2.685280e-49 | -8.615850e-47 |
| Msa0222120 | Msa0385620 | 0.805693 | 1.180377e-49 | -8.615850e-47 |
| Msa0226800 | Msa0385620 | 0.818869 | 1.565173e-52 | -8.615850e-47 |
| Msa0378000 | Msa0385620 | 0.823952 | 1.049919e-53 | -8.615850e-47 |
| Msa0385620 | Msa0387790 | 0.838034 | 3.654221e-57 | -8.615850e-47 |
| Msa0385620 | Msa0393140 | 0.803250 | 3.813869e-49 | -8.615850e-47 |
| Msa0385620 | Msa0396970 | 0.819206 | 1.311829e-52 | -8.615850e-47 |
| Msa0385620 | Msa0397000 | 0.813067 | 3.087229e-51 | -8.615850e-47 |
| Msa0385620 | Msa0400900 | 0.808734 | 2.677794e-50 | -8.615850e-47 |
| Msa0385620 | Msa0427590 | 0.811722 | 6.072799e-51 | -8.615850e-47 |
| Msa0385620 | Msa0458110 | 0.800741 | 1.249941e-48 | -8.615850e-47 |
| Msa0385620 | Msa0469270 | 0.801308 | 9.572874e-49 | -8.615850e-47 |
| Msa0385620 | Msa0470030 | 0.808117 | 3.625050e-50 | -8.615850e-47 |
| Msa0385620 | Msa0489620 | 0.808015 | 3.811405e-50 | -8.615850e-47 |
| Msa0385620 | Msa0492000 | 0.816868 | 4.430248e-52 | -8.615850e-47 |
| Msa0385620 | Msa0512310 | 0.838356 | 3.018506e-57 | -8.615850e-47 |
| Msa0385620 | Msa0514260 | 0.803428 | 3.503092e-49 | -8.615850e-47 |
| Msa0385620 | Msa0518160 | 0.814882 | 1.228428e-51 | -8.615850e-47 |
| Msa0385620 | Msa0528170 | 0.802371 | 5.791550e-49 | -8.615850e-47 |
| Msa0385620 | Msa0607280 | 0.812889 | 3.377512e-51 | -8.615850e-47 |
| Msa0385620 | Msa0607300 | 0.806312 | 8.743686e-50 | -8.615850e-47 |
| Msa0385620 | Msa0672350 | 0.803203 | 3.900049e-49 | -8.615850e-47 |
| Msa0385620 | Msa0677110 | 0.804420 | 2.178440e-49 | -8.615850e-47 |
| Msa0385620 | Msa0688760 | 0.802261 | 6.100407e-49 | -8.615850e-47 |
| Msa0385620 | Msa0691100 | 0.834350 | 3.153748e-56 | -8.615850e-47 |
| Msa0385620 | Msa0702070 | 0.826264 | 2.984653e-54 | -8.615850e-47 |
| Msa0385620 | Msa0702120 | 0.834617 | 2.701622e-56 | -8.615850e-47 |
| Msa0385620 | Msa0713550 | 0.833605 | 4.844395e-56 | -8.615850e-47 |
| Msa0385620 | Msa0726650 | 0.830211 | 3.336150e-55 | -8.615850e-47 |
| Msa0385620 | Msa0853920 | 0.800770 | 1.233025e-48 | -8.615850e-47 |
| Msa0385620 | Msa0900320 | 0.838429 | 2.890584e-57 | -8.615850e-47 |
| Msa0385620 | Msa0901140 | 0.813837 | 2.090862e-51 | -8.615850e-47 |
| Msa0385620 | Msa0926090 | 0.830039 | 3.675811e-55 | -8.615850e-47 |
| Msa0385620 | Msa0965960 | 0.842306 | 2.802912e-58 | -8.615850e-47 |
| Msa0385620 | Msa0970120 | 0.807432 | 5.068357e-50 | -8.615850e-47 |
| Msa0385620 | Msa1001780 | 0.806192 | 9.268673e-50 | -8.615850e-47 |
| Msa0385620 | Msa1067430 | 0.808201 | 3.479089e-50 | -8.615850e-47 |
| Msa0385620 | Msa1111670 | 0.801672 | 8.063290e-49 | -8.615850e-47 |
| Msa0385620 | Msa1130070 | 0.812460 | 4.192736e-51 | -8.615850e-47 |
| Msa0385620 | Msa1130660 | 0.849228 | 3.700009e-60 | -8.615850e-47 |
| Msa0385620 | Msa1130730 | 0.845779 | 3.281314e-59 | -8.615850e-47 |
| Msa0385620 | Msa1149760 | 0.816375 | 5.713514e-52 | -8.615850e-47 |
| Msa0385620 | Msa1161160 | 0.801210 | 1.002605e-48 | -8.615850e-47 |
| Msa0385620 | Msa1165810 | 0.800413 | 1.458480e-48 | -8.615850e-47 |
| Msa0385620 | Msa1166180 | 0.808721 | 2.694443e-50 | -8.615850e-47 |
| Msa0385620 | Msa1166280 | 0.810542 | 1.094332e-50 | -8.615850e-47 |
| Msa0385620 | Msa1208750 | 0.808866 | 2.509004e-50 | -8.615850e-47 |
| Msa0385620 | Msa1219780 | -0.807141 | 5.844005e-50 | -8.615850e-47 |
| Msa0385620 | Msa1226600 | 0.806356 | 8.559382e-50 | -8.615850e-47 |
| Msa0385620 | Msa1233770 | 0.802934 | 4.431782e-49 | -8.615850e-47 |
| Msa0385620 | Msa1263590 | 0.831268 | 1.838039e-55 | -8.615850e-47 |
| Msa0385620 | Msa1263670 | 0.828856 | 7.123892e-55 | -8.615850e-47 |
| Msa0385620 | Msa1276080 | 0.807749 | 4.340795e-50 | -8.615850e-47 |
| Msa0385620 | Msa1279340 | 0.806037 | 9.990150e-50 | -8.615850e-47 |
| Msa0385620 | Msa1300880 | 0.801610 | 8.301816e-49 | -8.615850e-47 |
| Msa0385620 | Msa1319520 | 0.800809 | 1.210992e-48 | -8.615850e-47 |
| Msa0385620 | Msa1325650 | 0.810725 | 9.992525e-51 | -8.615850e-47 |
| Msa0385620 | Msa1342080 | 0.803340 | 3.652464e-49 | -8.615850e-47 |
| Msa0385620 | Msa1352290 | 0.808228 | 3.434190e-50 | -8.615850e-47 |
| Msa0385620 | Msa1364650 | 0.810340 | 1.210437e-50 | -8.615850e-47 |
| Msa0385620 | Msa1380720 | 0.829626 | 4.634182e-55 | -8.615850e-47 |
| Msa0385620 | Msa1407210 | -0.812963 | 3.253929e-51 | -8.615850e-47 |
| Msa0385620 | Msa1410170 | 0.807050 | 6.108106e-50 | -8.615850e-47 |
| Msa0385620 | Msa1415250 | 0.804251 | 2.362411e-49 | -8.615850e-47 |
| Msa0385620 | Msa1416460 | 0.804615 | 1.983759e-49 | -8.615850e-47 |
| Msa0385620 | Msa1422500 | 0.810171 | 1.316010e-50 | -8.615850e-47 |
| Msa0385620 | Msa1423190 | 0.815631 | 8.374034e-52 | -8.615850e-47 |
| Msa0385620 | Msa1423230 | 0.806530 | 7.867202e-50 | -8.615850e-47 |
| Msa0385620 | Msa1423550 | 0.824712 | 6.956520e-54 | -8.615850e-47 |
| Msa0385620 | Msa1432350 | 0.806389 | 8.424179e-50 | -8.615850e-47 |
| Msa0385620 | Msa1449600 | 0.802566 | 5.278736e-49 | -8.615850e-47 |
| Msa0385620 | Msa1449680 | 0.801588 | 8.389881e-49 | -8.615850e-47 |
| Msa0243160 | Msa0385620 | 0.802322 | 5.927538e-49 | -8.615850e-47 |
| Msa0247310 | Msa0385620 | 0.801045 | 1.083634e-48 | -8.615850e-47 |
| Msa0253240 | Msa0385620 | 0.804256 | 2.357796e-49 | -8.615850e-47 |
| Msa0258380 | Msa0385620 | 0.808764 | 2.638251e-50 | -8.615850e-47 |
| Msa0258410 | Msa0385620 | 0.817202 | 3.725757e-52 | -8.615850e-47 |
| Msa0263620 | Msa0385620 | 0.805330 | 1.406291e-49 | -8.615850e-47 |
| Msa0280120 | Msa0385620 | 0.818485 | 1.913099e-52 | -8.615850e-47 |
| Msa0304870 | Msa0385620 | 0.842743 | 2.146101e-58 | -8.615850e-47 |
| Msa0311570 | Msa0385620 | 0.800900 | 1.160074e-48 | -8.615850e-47 |
| Msa0321230 | Msa0385620 | 0.816884 | 4.392417e-52 | -8.615850e-47 |
| Msa0327900 | Msa0385620 | 0.810382 | 1.185136e-50 | -8.615850e-47 |
| Msa0334780 | Msa0385620 | 0.802488 | 5.478076e-49 | -8.615850e-47 |
| Msa0335860 | Msa0385620 | 0.808293 | 3.325565e-50 | -8.615850e-47 |
| Msa0341260 | Msa0385620 | 0.841233 | 5.380669e-58 | -8.615850e-47 |
| Msa0352200 | Msa0385620 | 0.801324 | 9.502025e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0385620 | MtrunA17_Chr3g0143321 | 92.473 | 465 | 16 | 3 | 17 | 471 | 1 | 456 | 0.0 | 848 |
| Msa0385620 | MtrunA17_Chr1g0200011 | 25.510 | 294 | 146 | 8 | 167 | 432 | 95 | 343 | 3.31e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0385620 | AT1G76050.2 | 65.385 | 390 | 110 | 4 | 69 | 455 | 62 | 429 | 1.26e-175 | 499 |
| Msa0385620 | AT1G76050.1 | 64.234 | 274 | 73 | 4 | 69 | 339 | 62 | 313 | 4.47e-112 | 333 |
| Msa0385620 | AT3G52260.4 | 27.778 | 234 | 117 | 5 | 167 | 383 | 97 | 295 | 2.96e-15 | 77.4 |
| Msa0385620 | AT3G52260.2 | 27.778 | 234 | 117 | 5 | 167 | 383 | 97 | 295 | 6.09e-15 | 76.6 |
| Msa0385620 | AT3G52260.3 | 26.250 | 240 | 125 | 5 | 167 | 389 | 127 | 331 | 3.06e-13 | 71.6 |
Find 121 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGTGCGCATGCCAAGTATT+TGG | 0.214985 | 3_1:+89196958 | Msa0385620:CDS |
| TTGAAGTTCTAAAGTGAAAT+TGG | 0.222929 | 3_1:-89192754 | None:intergenic |
| GAATCTGATGATGAACTTAA+TGG | 0.254410 | 3_1:+89194818 | Msa0385620:CDS |
| GGGGTACCTACTCCAGTTTC+TGG | 0.276248 | 3_1:+89195163 | Msa0385620:CDS |
| ATCATACGAAGCCGGTTATT+AGG | 0.304094 | 3_1:-89195214 | None:intergenic |
| ACGTCTGGGACACTTGTAAA+TGG | 0.307453 | 3_1:+89194728 | Msa0385620:CDS |
| TGCCTTCATGCTTTGACTCT+CGG | 0.309092 | 3_1:+89197109 | Msa0385620:CDS |
| CGTGCGCATGCCAAGTATTT+GGG | 0.328224 | 3_1:+89196959 | Msa0385620:CDS |
| GTTAGATTCTAGATTGTCTA+TGG | 0.343480 | 3_1:+89194871 | Msa0385620:CDS |
| ACCTCAACACGTCCAGAAAC+TGG | 0.356510 | 3_1:-89195175 | None:intergenic |
| GCCTTCATGCTTTGACTCTC+GGG | 0.373527 | 3_1:+89197110 | Msa0385620:CDS |
| CTGCTAGGTGATGAGGTATA+TGG | 0.375337 | 3_1:+89196989 | Msa0385620:CDS |
| AAAGTAATTGAGATACTTGC+TGG | 0.384759 | 3_1:+89195802 | Msa0385620:CDS |
| AAACAGTTTCTGAGCTAGAT+AGG | 0.391798 | 3_1:+89197083 | Msa0385620:CDS |
| TTGAGCCAGCTTCGTAGAAT+TGG | 0.391980 | 3_1:+89197311 | Msa0385620:CDS |
| GCAATGGGAGAGAAGTAAAA+TGG | 0.392902 | 3_1:-89192782 | None:intergenic |
| AAAATGTCATTAAAATCTAC+AGG | 0.393988 | 3_1:-89197290 | None:intergenic |
| TCTTTAGAAAATTCAACATT+TGG | 0.398853 | 3_1:-89194773 | None:intergenic |
| TTGTAATTTGTAAGCCGGTT+TGG | 0.406008 | 3_1:+89197380 | Msa0385620:exon |
| TCTAATCTGTGTACAATCCC+TGG | 0.409587 | 3_1:-89194905 | None:intergenic |
| GACGATGGTGGAATCAAATC+TGG | 0.417745 | 3_1:+89192893 | Msa0385620:CDS |
| CCAGCACCTGGCAATACGTC+TGG | 0.433660 | 3_1:+89194713 | Msa0385620:CDS |
| TAGAAAATTCAACATTTGGC+AGG | 0.440551 | 3_1:-89194769 | None:intergenic |
| GTTGAGTGGAAGTTGGAAAC+TGG | 0.442106 | 3_1:+89195841 | Msa0385620:CDS |
| AGGTTTCAGCATCCTCATAC+AGG | 0.447372 | 3_1:+89197239 | Msa0385620:intron |
| GTTTCTTTCAATGTCAGAGC+TGG | 0.450108 | 3_1:+89194249 | Msa0385620:CDS |
| CAGAGGTACACCCAAATACT+TGG | 0.452967 | 3_1:-89196969 | None:intergenic |
| CACTACCAATTCTACGAAGC+TGG | 0.462868 | 3_1:-89197316 | None:intergenic |
| GGAAACTGGACGCACTCATC+AGG | 0.468105 | 3_1:+89195855 | Msa0385620:CDS |
| GAATTACGCCGGCGTGCGGT+TGG | 0.475378 | 3_1:+89192859 | Msa0385620:CDS |
| GTCTACGTTAGTCTCACTGC+CGG | 0.477724 | 3_1:+89195142 | Msa0385620:CDS |
| GAAAATTGAGACTCGATAGT+TGG | 0.478506 | 3_1:+89192915 | Msa0385620:CDS |
| TTATTAGGATCACGGCCAAC+AGG | 0.479835 | 3_1:-89195199 | None:intergenic |
| GTAGAAACGGATTTCGCAAT+GGG | 0.481273 | 3_1:-89192797 | None:intergenic |
| TTCGGAATTACCATGTGAGC+AGG | 0.484681 | 3_1:-89194381 | None:intergenic |
| GTTAAAGAAGTATGATAAGA+AGG | 0.486491 | 3_1:-89197403 | None:intergenic |
| CAACATTTGGCAGGTTGCAA+TGG | 0.489674 | 3_1:-89194760 | None:intergenic |
| ACCCTTCAGAAGAACTTGAC+TGG | 0.494113 | 3_1:-89194850 | None:intergenic |
| TGGATCTCTTCTCGCATCAA+TGG | 0.494517 | 3_1:+89192935 | Msa0385620:CDS |
| GGGTATTGTAATTTGTAAGC+CGG | 0.495438 | 3_1:+89197375 | Msa0385620:exon |
| TTTCTTTCAATGTCAGAGCT+GGG | 0.495851 | 3_1:+89194250 | Msa0385620:CDS |
| TTGGCCGTGATCCTAATAAC+CGG | 0.497077 | 3_1:+89195203 | Msa0385620:CDS |
| TGCATTGGTTGAGTGGAAGT+TGG | 0.497604 | 3_1:+89195834 | Msa0385620:CDS |
| TCCAGTTTCTGGACGTGTTG+AGG | 0.498584 | 3_1:+89195174 | Msa0385620:CDS |
| GCTGGACTCGTTCATGTCAA+TGG | 0.501112 | 3_1:+89192992 | Msa0385620:CDS |
| TCACCTACTAGCCGCATGAC+GGG | 0.501679 | 3_1:-89195269 | None:intergenic |
| AACATTTCGCTATGCAAACT+CGG | 0.501751 | 3_1:-89197058 | None:intergenic |
| GTAGCTGTGCATTGGTTGAG+TGG | 0.505625 | 3_1:+89195827 | Msa0385620:CDS |
| CAATGGCCGTGTTGTTGATA+AGG | 0.509560 | 3_1:+89193009 | Msa0385620:CDS |
| GCAGCAGTTGAGAGCTGTGC+CGG | 0.509649 | 3_1:+89194302 | Msa0385620:CDS |
| GTATGATAAGAAGGCCAAAC+CGG | 0.510348 | 3_1:-89197394 | None:intergenic |
| CATTGTGGTGATACTTGAGC+AGG | 0.510838 | 3_1:+89194227 | Msa0385620:CDS |
| CATAAATAAACCTGCTCACA+TGG | 0.510867 | 3_1:+89194371 | Msa0385620:CDS |
| TTTCACAGAATTGACTAGTC+CGG | 0.511251 | 3_1:-89195245 | None:intergenic |
| TCTACGTTAGTCTCACTGCC+GGG | 0.511350 | 3_1:+89195143 | Msa0385620:CDS |
| GTTTATTTATGACTAGCAAA+TGG | 0.513827 | 3_1:-89194359 | None:intergenic |
| AGTGTCCCAGACGTATTGCC+AGG | 0.521402 | 3_1:-89194719 | None:intergenic |
| GTCCAGTCAAGTATTAAAGC+TGG | 0.521976 | 3_1:+89192974 | Msa0385620:CDS |
| GCATCCTCATACAGGGGAGC+AGG | 0.525403 | 3_1:+89197247 | Msa0385620:CDS |
| TGCAAACTCGGAGTTGTTCG+TGG | 0.526136 | 3_1:-89197046 | None:intergenic |
| TCCCAGTCAAGTTCTTCTGA+AGG | 0.527724 | 3_1:+89194848 | Msa0385620:CDS |
| GTCCAGCTTTAATACTTGAC+TGG | 0.528396 | 3_1:-89192976 | None:intergenic |
| CCCTTCAGAAGAACTTGACT+GGG | 0.529961 | 3_1:-89194849 | None:intergenic |
| AAGCCCGTCATGCGGCTAGT+AGG | 0.531246 | 3_1:+89195266 | Msa0385620:CDS |
| ATCATCGAAGAAAGTAGAAA+CGG | 0.535644 | 3_1:-89192810 | None:intergenic |
| TGCACCTGCTCCCCTGTATG+AGG | 0.537559 | 3_1:-89197251 | None:intergenic |
| CTTCGTATGATCGCTGTAGC+CGG | 0.547253 | 3_1:+89195226 | Msa0385620:CDS |
| TTATCGCTTAACACCTCATG+TGG | 0.549398 | 3_1:+89192698 | Msa0385620:CDS |
| TAGGTTGTGCATCCAGCACC+TGG | 0.549682 | 3_1:+89194701 | Msa0385620:intron |
| CCAGACGTATTGCCAGGTGC+TGG | 0.551763 | 3_1:-89194713 | None:intergenic |
| CTAATCTGTGTACAATCCCT+GGG | 0.557086 | 3_1:-89194904 | None:intergenic |
| CCCAGTCAAGTTCTTCTGAA+GGG | 0.559475 | 3_1:+89194849 | Msa0385620:CDS |
| TTCGATGATTCAAACTCCAA+CGG | 0.562551 | 3_1:+89192824 | Msa0385620:CDS |
| GGACGTGTTGAGGTTCCTGT+TGG | 0.563398 | 3_1:+89195184 | Msa0385620:CDS |
| TGGGTTACTAGTTGTCGCTA+AGG | 0.563661 | 3_1:+89194940 | Msa0385620:CDS |
| GAAGAAATTGTCGACGATGG+TGG | 0.564642 | 3_1:+89192881 | Msa0385620:CDS |
| TGTACCTCTGCTAGGTGATG+AGG | 0.565230 | 3_1:+89196982 | Msa0385620:CDS |
| TGAAAGTATTTCTCACTCAA+AGG | 0.574310 | 3_1:+89197337 | Msa0385620:CDS |
| GGTTTCAGCATCCTCATACA+GGG | 0.574635 | 3_1:+89197240 | Msa0385620:intron |
| AAGTAATTGAGATACTTGCT+GGG | 0.576544 | 3_1:+89195803 | Msa0385620:CDS |
| CAGCACCTGGCAATACGTCT+GGG | 0.578291 | 3_1:+89194714 | Msa0385620:CDS |
| AGTAGAAACGGATTTCGCAA+TGG | 0.578492 | 3_1:-89192798 | None:intergenic |
| TGTGCCGGAAAACATACCTC+TGG | 0.579322 | 3_1:+89194317 | Msa0385620:CDS |
| GCATGGTCTTGTCATTGCTA+CGG | 0.579433 | 3_1:+89197023 | Msa0385620:CDS |
| TCTATGGCATCAATTCGCCC+AGG | 0.580707 | 3_1:+89194887 | Msa0385620:CDS |
| AGATTAGACAAAGGCACGAG+TGG | 0.588012 | 3_1:+89194920 | Msa0385620:CDS |
| ATCACCTACTAGCCGCATGA+CGG | 0.592873 | 3_1:-89195270 | None:intergenic |
| TTCTTTCAATGTCAGAGCTG+GGG | 0.593498 | 3_1:+89194251 | Msa0385620:CDS |
| CTAGGTGATGAGGTATATGG+AGG | 0.595073 | 3_1:+89196992 | Msa0385620:CDS |
| TATTTGGGTGTACCTCTGCT+AGG | 0.595506 | 3_1:+89196974 | Msa0385620:CDS |
| GTTTCAGCATCCTCATACAG+GGG | 0.596383 | 3_1:+89197241 | Msa0385620:CDS |
| AAATGTCATTAAAATCTACA+GGG | 0.601078 | 3_1:-89197289 | None:intergenic |
| ACCCGAGAGTCAAAGCATGA+AGG | 0.607294 | 3_1:-89197111 | None:intergenic |
| TTCTGTGAAAGCCCGTCATG+CGG | 0.607595 | 3_1:+89195258 | Msa0385620:CDS |
| AGAGTCAAAGCATGAAGGCA+AGG | 0.615312 | 3_1:-89197106 | None:intergenic |
| TCAAGCTACGCACTATCAAG+AGG | 0.626322 | 3_1:+89195119 | Msa0385620:CDS |
| AAACGAATTACGCCGGCGTG+CGG | 0.629163 | 3_1:+89192855 | Msa0385620:CDS |
| CTATGGCATCAATTCGCCCA+GGG | 0.635497 | 3_1:+89194888 | Msa0385620:CDS |
| TCACGATAATAGAGCTTCCG+CGG | 0.638044 | 3_1:-89192671 | None:intergenic |
| CAAGCTACGCACTATCAAGA+GGG | 0.647303 | 3_1:+89195120 | Msa0385620:CDS |
| GATTAGACAAAGGCACGAGT+GGG | 0.651038 | 3_1:+89194921 | Msa0385620:CDS |
| AGTAATTGAGATACTTGCTG+GGG | 0.652006 | 3_1:+89195804 | Msa0385620:CDS |
| CTACAGCGATCATACGAAGC+CGG | 0.657140 | 3_1:-89195222 | None:intergenic |
| ATATGGAGGGACGAAAAGCA+TGG | 0.659140 | 3_1:+89197006 | Msa0385620:CDS |
| TAATTTGTAGTTGAGCATTG+TGG | 0.661536 | 3_1:+89194212 | Msa0385620:intron |
| TGAGATCAAATGTACGATTG+CGG | 0.665499 | 3_1:+89194275 | Msa0385620:CDS |
| TTGGAAGAAATTGTCGACGA+TGG | 0.672159 | 3_1:+89192878 | Msa0385620:CDS |
| AATTTCTTCCAACCGCACGC+CGG | 0.673764 | 3_1:-89192867 | None:intergenic |
| GAAGCCGGTTATTAGGATCA+CGG | 0.679316 | 3_1:-89195207 | None:intergenic |
| ACACGTCCAGAAACTGGAGT+AGG | 0.683054 | 3_1:-89195169 | None:intergenic |
| TCTTCATAAACTATATCCAG+AGG | 0.684572 | 3_1:-89194333 | None:intergenic |
| CTACGTTAGTCTCACTGCCG+GGG | 0.686770 | 3_1:+89195144 | Msa0385620:CDS |
| AGAAACTGGAGTAGGTACCC+CGG | 0.688257 | 3_1:-89195161 | None:intergenic |
| TAGGTGATGAGGTATATGGA+GGG | 0.689938 | 3_1:+89196993 | Msa0385620:CDS |
| ATGTCATTAAAATCTACAGG+GGG | 0.696305 | 3_1:-89197287 | None:intergenic |
| AATGTCATTAAAATCTACAG+GGG | 0.696801 | 3_1:-89197288 | None:intergenic |
| AACACCGCAAAATCCACATG+AGG | 0.697166 | 3_1:-89192711 | None:intergenic |
| TATACCTCATCACCTAGCAG+AGG | 0.705895 | 3_1:-89196986 | None:intergenic |
| AGACTACCTTATCAACAACA+CGG | 0.706446 | 3_1:-89193015 | None:intergenic |
| ATTGTACACAGATTAGACAA+AGG | 0.708980 | 3_1:+89194911 | Msa0385620:CDS |
| GTAATTGAGATACTTGCTGG+GGG | 0.718933 | 3_1:+89195805 | Msa0385620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTATATTTTTAAAAAAT+TGG | + | chr3_1:89197454-89197473 | Msa0385620:three_prime_UTR | 0.0% |
| !!! | TATTATATTTTTAAAAAATT+GGG | + | chr3_1:89197455-89197474 | Msa0385620:three_prime_UTR | 0.0% |
| !!! | ATTTTCATTCTAAATTAATT+AGG | + | chr3_1:89194158-89194177 | Msa0385620:intron | 10.0% |
| !! | TACTAATATTGAATTATATT+AGG | + | chr3_1:89195330-89195349 | Msa0385620:intron | 10.0% |
| !! | TAATATTACATATTACATTT+GGG | + | chr3_1:89195687-89195706 | Msa0385620:intron | 10.0% |
| !! | AAATATTAAAATAGATTTAG+AGG | + | chr3_1:89196708-89196727 | Msa0385620:intron | 10.0% |
| !! | TAAATTAATTAGGTTCTTTA+AGG | + | chr3_1:89194168-89194187 | Msa0385620:intron | 15.0% |
| !!! | ATATTACATATATTTTGCAA+TGG | - | chr3_1:89195673-89195692 | None:intergenic | 15.0% |
| !! | GTAATATTACATATTACATT+TGG | + | chr3_1:89195686-89195705 | Msa0385620:intron | 15.0% |
| !! | TTTACATATAATGTATTCTT+AGG | + | chr3_1:89196052-89196071 | Msa0385620:intron | 15.0% |
| !!! | GTTTTCATATATTATATCTT+AGG | - | chr3_1:89196155-89196174 | None:intergenic | 15.0% |
| !! | TTAGAAGATATTATAAGTTT+AGG | - | chr3_1:89196914-89196933 | None:intergenic | 15.0% |
| !!! | ATTACTACGAATTTTCTATT+TGG | + | chr3_1:89193091-89193110 | Msa0385620:intron | 20.0% |
| !! | ATCATTTAAACATTCAAGAA+TGG | - | chr3_1:89193734-89193753 | None:intergenic | 20.0% |
| !! | AAATATTCTGAGTATAATAG+TGG | + | chr3_1:89193898-89193917 | Msa0385620:intron | 20.0% |
| !! | ATAAATATATTCTAGGTCTA+GGG | - | chr3_1:89194039-89194058 | None:intergenic | 20.0% |
| !! | AAATAACCAAACAAAAAACT+GGG | - | chr3_1:89194066-89194085 | None:intergenic | 20.0% |
| !!! | AATACTTGATGATTAAATTC+AGG | + | chr3_1:89194530-89194549 | Msa0385620:intron | 20.0% |
| !!! | TCTTTAGAAAATTCAACATT+TGG | - | chr3_1:89194776-89194795 | None:intergenic | 20.0% |
| !!! | AAATGTTGAATTTTCTAAAG+AGG | + | chr3_1:89194775-89194794 | Msa0385620:CDS | 20.0% |
| !! | TTTGAGAAGTTTATTCAAAA+AGG | + | chr3_1:89195716-89195735 | Msa0385620:intron | 20.0% |
| !!! | TAAGATAACTTTTGTTTGAA+TGG | + | chr3_1:89196128-89196147 | Msa0385620:intron | 20.0% |
| !! | TTACATAGTTTAAACATCTT+AGG | + | chr3_1:89196239-89196258 | Msa0385620:intron | 20.0% |
| !! | AAATGTAAACATTTGATTCA+AGG | + | chr3_1:89196294-89196313 | Msa0385620:intron | 20.0% |
| !! | AAGTGTTTCATGTAATAAAA+AGG | + | chr3_1:89196344-89196363 | Msa0385620:intron | 20.0% |
| !! | AAATGTCATTAAAATCTACA+GGG | - | chr3_1:89197292-89197311 | None:intergenic | 20.0% |
| !! | AAAATGTCATTAAAATCTAC+AGG | - | chr3_1:89197293-89197312 | None:intergenic | 20.0% |
| !!! | TTGAAGTTCTAAAGTGAAAT+TGG | - | chr3_1:89192757-89192776 | None:intergenic | 25.0% |
| !!! | TAAAATTGTGAAGTCACTTT+TGG | - | chr3_1:89193370-89193389 | None:intergenic | 25.0% |
| !! | ATATATCCCTTGTTTATTTG+TGG | + | chr3_1:89193492-89193511 | Msa0385620:intron | 25.0% |
| ! | TTCGAATATTTAGATGAGAA+AGG | + | chr3_1:89193538-89193557 | Msa0385620:intron | 25.0% |
| ! | TCGAATATTTAGATGAGAAA+GGG | + | chr3_1:89193539-89193558 | Msa0385620:intron | 25.0% |
| ! | CATAAATATATTCTAGGTCT+AGG | - | chr3_1:89194040-89194059 | None:intergenic | 25.0% |
| ! | GGGATACATAAATATATTCT+AGG | - | chr3_1:89194046-89194065 | None:intergenic | 25.0% |
| ! | GAAATAACCAAACAAAAAAC+TGG | - | chr3_1:89194067-89194086 | None:intergenic | 25.0% |
| !! | TGTTTGGTTATTTCATCAAT+TGG | + | chr3_1:89194073-89194092 | Msa0385620:intron | 25.0% |
| !! | ATTTATGATTTGCAAACAAG+AGG | - | chr3_1:89194138-89194157 | None:intergenic | 25.0% |
| ! | GTTTATTTATGACTAGCAAA+TGG | - | chr3_1:89194362-89194381 | None:intergenic | 25.0% |
| !! | AGAAATTTTCAGAAGGAAAA+GGG | + | chr3_1:89194628-89194647 | Msa0385620:intron | 25.0% |
| !! | TGAATTATATTAGGTGCTTT+TGG | + | chr3_1:89195339-89195358 | Msa0385620:intron | 25.0% |
| ! | ATAAATGTGTACACAAATGT+TGG | - | chr3_1:89195430-89195449 | None:intergenic | 25.0% |
| !! | GTTTTATATCAACTGCTTAA+TGG | + | chr3_1:89195738-89195757 | Msa0385620:intron | 25.0% |
| ! | ACATATAATGTATTCTTAGG+TGG | + | chr3_1:89196055-89196074 | Msa0385620:intron | 25.0% |
| ! | TGTTTAAACTATGTAACTTG+TGG | - | chr3_1:89196235-89196254 | None:intergenic | 25.0% |
| ! | AGGTCAAATGTTAAAAAAGA+TGG | + | chr3_1:89196259-89196278 | Msa0385620:intron | 25.0% |
| ! | TTTATTACATGAAACACTTG+AGG | - | chr3_1:89196343-89196362 | None:intergenic | 25.0% |
| !! | TTTCTTACTAAGGAACTTTT+AGG | - | chr3_1:89196614-89196633 | None:intergenic | 25.0% |
| ! | TAAAAGTTCCTTAGTAAGAA+AGG | + | chr3_1:89196613-89196632 | Msa0385620:intron | 25.0% |
| ! | AATGTCATTAAAATCTACAG+GGG | - | chr3_1:89197291-89197310 | None:intergenic | 25.0% |
| !! | TCAAAGGCCAAATTTTTAAA+AGG | + | chr3_1:89197353-89197372 | Msa0385620:CDS | 25.0% |
| !!! | CAAAGGCCAAATTTTTAAAA+GGG | + | chr3_1:89197354-89197373 | Msa0385620:CDS | 25.0% |
| !!! | AAAGGCCAAATTTTTAAAAG+GGG | + | chr3_1:89197355-89197374 | Msa0385620:CDS | 25.0% |
| !!! | CAATACCCCTTTTAAAAATT+TGG | - | chr3_1:89197363-89197382 | None:intergenic | 25.0% |
| !! | GTTAAAGAAGTATGATAAGA+AGG | - | chr3_1:89197406-89197425 | None:intergenic | 25.0% |
| ATCATCGAAGAAAGTAGAAA+CGG | - | chr3_1:89192813-89192832 | None:intergenic | 30.0% | |
| AGAACTTGTAGACACAAATT+CGG | - | chr3_1:89193068-89193087 | None:intergenic | 30.0% | |
| AACCAAAATCCATGTTTATG+AGG | - | chr3_1:89193207-89193226 | None:intergenic | 30.0% | |
| !! | TCATAAACATGGATTTTGGT+TGG | + | chr3_1:89193206-89193225 | Msa0385620:intron | 30.0% |
| GTGATGAGTTAACTAATAGA+AGG | - | chr3_1:89193320-89193339 | None:intergenic | 30.0% | |
| CAGAGATCCATTAATATCAA+TGG | + | chr3_1:89193344-89193363 | Msa0385620:intron | 30.0% | |
| ! | CTTTTGGCCATTGATATTAA+TGG | - | chr3_1:89193354-89193373 | None:intergenic | 30.0% |
| AAATCCAGATCATTCAATCT+TGG | + | chr3_1:89193468-89193487 | Msa0385620:intron | 30.0% | |
| TATTCCAAGATTGAATGATC+TGG | - | chr3_1:89193475-89193494 | None:intergenic | 30.0% | |
| AACTGACCACAAATAAACAA+GGG | - | chr3_1:89193501-89193520 | None:intergenic | 30.0% | |
| TCATATATTGCATTTGCAAG+AGG | + | chr3_1:89193632-89193651 | Msa0385620:intron | 30.0% | |
| TTTAAATGATGCACCCAAAT+TGG | + | chr3_1:89193744-89193763 | Msa0385620:intron | 30.0% | |
| TTTGAGAACTACCATTACTT+AGG | + | chr3_1:89193843-89193862 | Msa0385620:intron | 30.0% | |
| ACCATTACTTAGGACATTTA+AGG | + | chr3_1:89193853-89193872 | Msa0385620:intron | 30.0% | |
| !! | TACTTTTCGAACAAGTATTG+TGG | - | chr3_1:89193978-89193997 | None:intergenic | 30.0% |
| !!! | ATGTATCCCAGTTTTTTGTT+TGG | + | chr3_1:89194057-89194076 | Msa0385620:intron | 30.0% |
| GCTCAACTACAAATTAAGAA+AGG | - | chr3_1:89194208-89194227 | None:intergenic | 30.0% | |
| ! | TAATTTGTAGTTGAGCATTG+TGG | + | chr3_1:89194212-89194231 | Msa0385620:intron | 30.0% |
| TCTTCATAAACTATATCCAG+AGG | - | chr3_1:89194336-89194355 | None:intergenic | 30.0% | |
| AAATAACATCTTAGAGCAAG+TGG | - | chr3_1:89194407-89194426 | None:intergenic | 30.0% | |
| TATCTACTGTACAATTATGC+AGG | - | chr3_1:89194449-89194468 | None:intergenic | 30.0% | |
| ! | CAGAAATTTTCAGAAGGAAA+AGG | + | chr3_1:89194627-89194646 | Msa0385620:intron | 30.0% |
| TAGAAAATTCAACATTTGGC+AGG | - | chr3_1:89194772-89194791 | None:intergenic | 30.0% | |
| ! | GAATCTGATGATGAACTTAA+TGG | + | chr3_1:89194818-89194837 | Msa0385620:CDS | 30.0% |
| GTTAGATTCTAGATTGTCTA+TGG | + | chr3_1:89194871-89194890 | Msa0385620:CDS | 30.0% | |
| ATTGTACACAGATTAGACAA+AGG | + | chr3_1:89194911-89194930 | Msa0385620:CDS | 30.0% | |
| TATCAAGGCATACAAATACT+GGG | - | chr3_1:89195061-89195080 | None:intergenic | 30.0% | |
| ATATCAAGGCATACAAATAC+TGG | - | chr3_1:89195062-89195081 | None:intergenic | 30.0% | |
| TATTTGTATGCCTTGATATC+AGG | + | chr3_1:89195063-89195082 | Msa0385620:intron | 30.0% | |
| CCTACAGGTTAAAAGTTAAA+TGG | - | chr3_1:89195480-89195499 | None:intergenic | 30.0% | |
| !! | CCATTTAACTTTTAACCTGT+AGG | + | chr3_1:89195477-89195496 | Msa0385620:intron | 30.0% |
| TTTATAAGCTAATGACCTAC+AGG | - | chr3_1:89195495-89195514 | None:intergenic | 30.0% | |
| !! | TTTTAAGTGAGTGCAAACTA+TGG | - | chr3_1:89195546-89195565 | None:intergenic | 30.0% |
| ! | AAAGTTGATTACTATCTGTC+AGG | + | chr3_1:89195776-89195795 | Msa0385620:intron | 30.0% |
| AAAGTAATTGAGATACTTGC+TGG | + | chr3_1:89195802-89195821 | Msa0385620:CDS | 30.0% | |
| AAGTAATTGAGATACTTGCT+GGG | + | chr3_1:89195803-89195822 | Msa0385620:CDS | 30.0% | |
| ! | AACTTTAGAGAAATCCTAAG+TGG | + | chr3_1:89195892-89195911 | Msa0385620:intron | 30.0% |
| TTGTAAGTGAGAGAACTAAA+GGG | + | chr3_1:89195925-89195944 | Msa0385620:intron | 30.0% | |
| ACATTGCATAGATGTACTAA+CGG | + | chr3_1:89195994-89196013 | Msa0385620:intron | 30.0% | |
| AAGAAAAAACCCTAGCTTAA+AGG | + | chr3_1:89196186-89196205 | Msa0385620:intron | 30.0% | |
| ! | CAACTTTTACCTTTAAGCTA+GGG | - | chr3_1:89196198-89196217 | None:intergenic | 30.0% |
| ! | ATGTAACTTGTGGTATTGTA+TGG | - | chr3_1:89196225-89196244 | None:intergenic | 30.0% |
| TAAAAAAGATGGAGAAACAG+AGG | + | chr3_1:89196270-89196289 | Msa0385620:intron | 30.0% | |
| AAAAAAGATGGAGAAACAGA+GGG | + | chr3_1:89196271-89196290 | Msa0385620:intron | 30.0% | |
| GTAAACATTTGATTCAAGGA+AGG | + | chr3_1:89196298-89196317 | Msa0385620:intron | 30.0% | |
| GAATGAGTGAAAATACTACA+CGG | + | chr3_1:89196489-89196508 | Msa0385620:intron | 30.0% | |
| AATGAGTGAAAATACTACAC+GGG | + | chr3_1:89196490-89196509 | Msa0385620:intron | 30.0% | |
| TGGGTCTATTGTGTAAAAAT+TGG | + | chr3_1:89196547-89196566 | Msa0385620:intron | 30.0% | |
| CTAATCTACCTTTCTTACTA+AGG | - | chr3_1:89196624-89196643 | None:intergenic | 30.0% | |
| AAGAAAGGTAGATTAGATCA+AGG | + | chr3_1:89196628-89196647 | Msa0385620:intron | 30.0% | |
| ! | TTTTGCCTTTAGTGATTGAA+TGG | - | chr3_1:89196655-89196674 | None:intergenic | 30.0% |
| TAGGCTTTACTATATTACAG+TGG | - | chr3_1:89196895-89196914 | None:intergenic | 30.0% | |
| ATAACTTCGTAGCTAAACTT+TGG | + | chr3_1:89197152-89197171 | Msa0385620:intron | 30.0% | |
| ! | ATGACAATTGATAGCACTAT+TGG | + | chr3_1:89197198-89197217 | Msa0385620:intron | 30.0% |
| ! | AATTGATAGCACTATTGGTT+TGG | + | chr3_1:89197203-89197222 | Msa0385620:intron | 30.0% |
| ATGTCATTAAAATCTACAGG+GGG | - | chr3_1:89197290-89197309 | None:intergenic | 30.0% | |
| !! | TGAAAGTATTTCTCACTCAA+AGG | + | chr3_1:89197337-89197356 | Msa0385620:CDS | 30.0% |
| ! | AAGTTTTCATTTCAAAGCCG+CGG | + | chr3_1:89192654-89192673 | Msa0385620:CDS | 35.0% |
| TTCGATGATTCAAACTCCAA+CGG | + | chr3_1:89192824-89192843 | Msa0385620:CDS | 35.0% | |
| GAAAATTGAGACTCGATAGT+TGG | + | chr3_1:89192915-89192934 | Msa0385620:CDS | 35.0% | |
| AGACTACCTTATCAACAACA+CGG | - | chr3_1:89193018-89193037 | None:intergenic | 35.0% | |
| CAAATTCGGAACAGTTGAAA+TGG | - | chr3_1:89193054-89193073 | None:intergenic | 35.0% | |
| AAATCCATGTTTATGAGGCT+GGG | - | chr3_1:89193202-89193221 | None:intergenic | 35.0% | |
| AAAATCCATGTTTATGAGGC+TGG | - | chr3_1:89193203-89193222 | None:intergenic | 35.0% | |
| ! | AGCCTCATAAACATGGATTT+TGG | + | chr3_1:89193202-89193221 | Msa0385620:intron | 35.0% |
| !!! | AACATGGATTTTGGTTGGTT+AGG | + | chr3_1:89193211-89193230 | Msa0385620:intron | 35.0% |
| CCTCTGTTTATAATGAGTCA+GGG | - | chr3_1:89193411-89193430 | None:intergenic | 35.0% | |
| CCTGACTCATTATAAACAGA+GGG | + | chr3_1:89193409-89193428 | Msa0385620:intron | 35.0% | |
| CTCATTATAAACAGAGGGAT+TGG | + | chr3_1:89193414-89193433 | Msa0385620:intron | 35.0% | |
| GAACTGACCACAAATAAACA+AGG | - | chr3_1:89193502-89193521 | None:intergenic | 35.0% | |
| GAAGTCATAGATTCAAGTCA+TGG | - | chr3_1:89193664-89193683 | None:intergenic | 35.0% | |
| CAAGGAAAGACTTCCAATTT+GGG | - | chr3_1:89193760-89193779 | None:intergenic | 35.0% | |
| !! | ACTAGGAGATTATTTCTGCA+AGG | - | chr3_1:89193778-89193797 | None:intergenic | 35.0% |
| TTACAGATGTAGTCTCAACT+AGG | - | chr3_1:89193795-89193814 | None:intergenic | 35.0% | |
| GCCTTAAATGTCCTAAGTAA+TGG | - | chr3_1:89193857-89193876 | None:intergenic | 35.0% | |
| TTTCTTTCAATGTCAGAGCT+GGG | + | chr3_1:89194250-89194269 | Msa0385620:CDS | 35.0% | |
| TGAGATCAAATGTACGATTG+CGG | + | chr3_1:89194275-89194294 | Msa0385620:CDS | 35.0% | |
| !! | ATATCCAGAGGTATGTTTTC+CGG | - | chr3_1:89194324-89194343 | None:intergenic | 35.0% |
| CATAAATAAACCTGCTCACA+TGG | + | chr3_1:89194371-89194390 | Msa0385620:CDS | 35.0% | |
| !!! | AGATAGTGCGACACTTTTTT+TGG | + | chr3_1:89194464-89194483 | Msa0385620:intron | 35.0% |
| ! | CCTTCTGAAAATTTCTGACA+TGG | - | chr3_1:89194624-89194643 | None:intergenic | 35.0% |
| ! | CCATGTCAGAAATTTTCAGA+AGG | + | chr3_1:89194621-89194640 | Msa0385620:intron | 35.0% |
| CATTATATGCTCTTCAACCT+AGG | + | chr3_1:89194682-89194701 | Msa0385620:intron | 35.0% | |
| GAATGTTCATCCTGATATCA+AGG | - | chr3_1:89195076-89195095 | None:intergenic | 35.0% | |
| ! | TTTCACAGAATTGACTAGTC+CGG | - | chr3_1:89195248-89195267 | None:intergenic | 35.0% |
| ! | AGTAATTGAGATACTTGCTG+GGG | + | chr3_1:89195804-89195823 | Msa0385620:CDS | 35.0% |
| ! | ACAACAAGATTATGCCACTT+AGG | - | chr3_1:89195909-89195928 | None:intergenic | 35.0% |
| GTTGTAAGTGAGAGAACTAA+AGG | + | chr3_1:89195924-89195943 | Msa0385620:intron | 35.0% | |
| TTTACCATCGGAGTAAAACA+TGG | + | chr3_1:89195953-89195972 | Msa0385620:intron | 35.0% | |
| AAAACATGGTCGAATTTCCA+TGG | + | chr3_1:89195967-89195986 | Msa0385620:intron | 35.0% | |
| TAGTACATCTATGCAATGTC+CGG | - | chr3_1:89195993-89196012 | None:intergenic | 35.0% | |
| !!! | AGCTAGGGTTTTTTCTTCTT+TGG | - | chr3_1:89196183-89196202 | None:intergenic | 35.0% |
| ! | CCAACTTTTACCTTTAAGCT+AGG | - | chr3_1:89196199-89196218 | None:intergenic | 35.0% |
| CCTAGCTTAAAGGTAAAAGT+TGG | + | chr3_1:89196196-89196215 | Msa0385620:intron | 35.0% | |
| AACATTTGATTCAAGGAAGG+TGG | + | chr3_1:89196301-89196320 | Msa0385620:intron | 35.0% | |
| ! | AAAAAGGTACAACTCAAGCT+AGG | + | chr3_1:89196360-89196379 | Msa0385620:intron | 35.0% |
| ! | AAAAGGTACAACTCAAGCTA+GGG | + | chr3_1:89196361-89196380 | Msa0385620:intron | 35.0% |
| GTATGAGAATGAGTGTTTGA+TGG | + | chr3_1:89196413-89196432 | Msa0385620:intron | 35.0% | |
| ATACTACACGGGATATGATT+AGG | + | chr3_1:89196501-89196520 | Msa0385620:intron | 35.0% | |
| TTAGCGTTCAAGCAATAGAT+GGG | + | chr3_1:89196528-89196547 | Msa0385620:intron | 35.0% | |
| AAGGACCATTCAATCACTAA+AGG | + | chr3_1:89196647-89196666 | Msa0385620:intron | 35.0% | |
| CAATCACTAAAGGCAAAAGA+AGG | + | chr3_1:89196657-89196676 | Msa0385620:intron | 35.0% | |
| AGATTTAGAGGACAATGCTT+TGG | + | chr3_1:89196720-89196739 | Msa0385620:intron | 35.0% | |
| AACATTTCGCTATGCAAACT+CGG | - | chr3_1:89197061-89197080 | None:intergenic | 35.0% | |
| AAACAGTTTCTGAGCTAGAT+AGG | + | chr3_1:89197083-89197102 | Msa0385620:CDS | 35.0% | |
| ! | GGGTATTGTAATTTGTAAGC+CGG | + | chr3_1:89197375-89197394 | Msa0385620:exon | 35.0% |
| ! | TTGTAATTTGTAAGCCGGTT+TGG | + | chr3_1:89197380-89197399 | Msa0385620:exon | 35.0% |
| TTATCGCTTAACACCTCATG+TGG | + | chr3_1:89192698-89192717 | Msa0385620:CDS | 40.0% | |
| ! | AACACCTCATGTGGATTTTG+CGG | + | chr3_1:89192707-89192726 | Msa0385620:CDS | 40.0% |
| ! | TTGGAATGCTTTTGTTGCTG+TGG | - | chr3_1:89192738-89192757 | None:intergenic | 40.0% |
| GCAATGGGAGAGAAGTAAAA+TGG | - | chr3_1:89192785-89192804 | None:intergenic | 40.0% | |
| ! | GTAGAAACGGATTTCGCAAT+GGG | - | chr3_1:89192800-89192819 | None:intergenic | 40.0% |
| ! | AGTAGAAACGGATTTCGCAA+TGG | - | chr3_1:89192801-89192820 | None:intergenic | 40.0% |
| !!! | ATTCGTTTTTGGTTCTCCGT+TGG | - | chr3_1:89192843-89192862 | None:intergenic | 40.0% |
| GAACCAAAAACGAATTACGC+CGG | + | chr3_1:89192848-89192867 | Msa0385620:CDS | 40.0% | |
| TTGGAAGAAATTGTCGACGA+TGG | + | chr3_1:89192878-89192897 | Msa0385620:CDS | 40.0% | |
| GTCCAGTCAAGTATTAAAGC+TGG | + | chr3_1:89192974-89192993 | Msa0385620:CDS | 40.0% | |
| ! | GTCCAGCTTTAATACTTGAC+TGG | - | chr3_1:89192979-89192998 | None:intergenic | 40.0% |
| CCTCCTTTCTCTTCTAAATG+CGG | + | chr3_1:89193172-89193191 | Msa0385620:intron | 40.0% | |
| CTCCTTTCTCTTCTAAATGC+GGG | + | chr3_1:89193173-89193192 | Msa0385620:intron | 40.0% | |
| TACCCGCATTTAGAAGAGAA+AGG | - | chr3_1:89193178-89193197 | None:intergenic | 40.0% | |
| GTTGGTTAGGAAGATCTAGA+GGG | + | chr3_1:89193224-89193243 | Msa0385620:intron | 40.0% | |
| GCATATCATCTGGAGAAGAA+GGG | + | chr3_1:89193246-89193265 | Msa0385620:intron | 40.0% | |
| !!! | GGCTGGTTTTAATGTGTATG+TGG | + | chr3_1:89193294-89193313 | Msa0385620:intron | 40.0% |
| ! | GTCAGGGACTAATTTGTACT+CGG | - | chr3_1:89193395-89193414 | None:intergenic | 40.0% |
| CCCTGACTCATTATAAACAG+AGG | + | chr3_1:89193408-89193427 | Msa0385620:intron | 40.0% | |
| CCCTCTGTTTATAATGAGTC+AGG | - | chr3_1:89193412-89193431 | None:intergenic | 40.0% | |
| TTTAGATGAGAAAGGGCAAC+AGG | + | chr3_1:89193546-89193565 | Msa0385620:intron | 40.0% | |
| TATAGCTCTTGTCTGAGTCT+AGG | + | chr3_1:89193582-89193601 | Msa0385620:intron | 40.0% | |
| ATAGCTCTTGTCTGAGTCTA+GGG | + | chr3_1:89193583-89193602 | Msa0385620:intron | 40.0% | |
| ACTGTACAATAGACCCACAA+TGG | - | chr3_1:89193613-89193632 | None:intergenic | 40.0% | |
| AAGAATGGAAGTCTTGCAGT+TGG | - | chr3_1:89193719-89193738 | None:intergenic | 40.0% | |
| GCAAGGAAAGACTTCCAATT+TGG | - | chr3_1:89193761-89193780 | None:intergenic | 40.0% | |
| TGAGACTACATCTGTAATGC+TGG | + | chr3_1:89193798-89193817 | Msa0385620:intron | 40.0% | |
| AGTCACTAACTGCAACAAGA+TGG | - | chr3_1:89193824-89193843 | None:intergenic | 40.0% | |
| ! | TAGATCAAGTGTTGTGCTGA+AGG | + | chr3_1:89193934-89193953 | Msa0385620:intron | 40.0% |
| !! | GGCATGCTTTAGAATCATCT+TGG | - | chr3_1:89194018-89194037 | None:intergenic | 40.0% |
| GTTTCTTTCAATGTCAGAGC+TGG | + | chr3_1:89194249-89194268 | Msa0385620:CDS | 40.0% | |
| TTCTTTCAATGTCAGAGCTG+GGG | + | chr3_1:89194251-89194270 | Msa0385620:CDS | 40.0% | |
| ACATCTTAGAGCAAGTGGTT+CGG | - | chr3_1:89194402-89194421 | None:intergenic | 40.0% | |
| CTACTGTACAATTATGCAGG+TGG | - | chr3_1:89194446-89194465 | None:intergenic | 40.0% | |
| GCACTACAGAATAAAGTGGT+TGG | - | chr3_1:89194569-89194588 | None:intergenic | 40.0% | |
| CCTAGCACTACAGAATAAAG+TGG | - | chr3_1:89194573-89194592 | None:intergenic | 40.0% | |
| CCACTTTATTCTGTAGTGCT+AGG | + | chr3_1:89194570-89194589 | Msa0385620:intron | 40.0% | |
| CTAATCTGTGTACAATCCCT+GGG | - | chr3_1:89194907-89194926 | None:intergenic | 40.0% | |
| TCTAATCTGTGTACAATCCC+TGG | - | chr3_1:89194908-89194927 | None:intergenic | 40.0% | |
| ATCATACGAAGCCGGTTATT+AGG | - | chr3_1:89195217-89195236 | None:intergenic | 40.0% | |
| AGTTGAAAATCCCTTCTGTG+TGG | + | chr3_1:89195453-89195472 | Msa0385620:intron | 40.0% | |
| GTTAAATGGACCACACAGAA+GGG | - | chr3_1:89195466-89195485 | None:intergenic | 40.0% | |
| AGTTAAATGGACCACACAGA+AGG | - | chr3_1:89195467-89195486 | None:intergenic | 40.0% | |
| ! | GTAATTGAGATACTTGCTGG+GGG | + | chr3_1:89195805-89195824 | Msa0385620:CDS | 40.0% |
| !! | TAAAGGGTGCTGTTTACCAT+CGG | + | chr3_1:89195941-89195960 | Msa0385620:intron | 40.0% |
| ! | AAAAGCATGCTGCAAAGTGT+TGG | - | chr3_1:89196034-89196053 | None:intergenic | 40.0% |
| GAGAGTCGAGAGGAAATAAA+TGG | + | chr3_1:89196077-89196096 | Msa0385620:intron | 40.0% | |
| GTCGAGAGGAAATAAATGGA+AGG | + | chr3_1:89196081-89196100 | Msa0385620:intron | 40.0% | |
| TAAATGGAAGGTTAGAGACG+TGG | + | chr3_1:89196093-89196112 | Msa0385620:intron | 40.0% | |
| TTCAAGGAAGGTGGTTGAAA+TGG | + | chr3_1:89196310-89196329 | Msa0385620:intron | 40.0% | |
| GTTAGCGTTCAAGCAATAGA+TGG | + | chr3_1:89196527-89196546 | Msa0385620:intron | 40.0% | |
| GAATCTCAACCTAGATCGTT+TGG | + | chr3_1:89196572-89196591 | Msa0385620:intron | 40.0% | |
| !! | CAAGTCTTATTCCACTAGGT+GGG | - | chr3_1:89196801-89196820 | None:intergenic | 40.0% |
| !! | AGACCAAGTCTTATTCCACT+AGG | - | chr3_1:89196805-89196824 | None:intergenic | 40.0% |
| TAGGTGATGAGGTATATGGA+GGG | + | chr3_1:89196993-89197012 | Msa0385620:CDS | 40.0% | |
| GTATGATAAGAAGGCCAAAC+CGG | - | chr3_1:89197397-89197416 | None:intergenic | 40.0% | |
| TCACGATAATAGAGCTTCCG+CGG | - | chr3_1:89192674-89192693 | None:intergenic | 45.0% | |
| AACACCGCAAAATCCACATG+AGG | - | chr3_1:89192714-89192733 | None:intergenic | 45.0% | |
| GAAGAAATTGTCGACGATGG+TGG | + | chr3_1:89192881-89192900 | Msa0385620:CDS | 45.0% | |
| !! | GACGATGGTGGAATCAAATC+TGG | + | chr3_1:89192893-89192912 | Msa0385620:CDS | 45.0% |
| TGGATCTCTTCTCGCATCAA+TGG | + | chr3_1:89192935-89192954 | Msa0385620:CDS | 45.0% | |
| ! | CAATGGCCGTGTTGTTGATA+AGG | + | chr3_1:89193009-89193028 | Msa0385620:CDS | 45.0% |
| CCGCATTTAGAAGAGAAAGG+AGG | - | chr3_1:89193175-89193194 | None:intergenic | 45.0% | |
| GTAACCCAGCCTCATAAACA+TGG | + | chr3_1:89193195-89193214 | Msa0385620:intron | 45.0% | |
| ! | GGTTGGTTAGGAAGATCTAG+AGG | + | chr3_1:89193223-89193242 | Msa0385620:intron | 45.0% |
| ! | GATCTAGAGGGCATATCATC+TGG | + | chr3_1:89193236-89193255 | Msa0385620:intron | 45.0% |
| GGCATATCATCTGGAGAAGA+AGG | + | chr3_1:89193245-89193264 | Msa0385620:intron | 45.0% | |
| CTGGAGAAGAAGGGTTAAGT+TGG | + | chr3_1:89193255-89193274 | Msa0385620:intron | 45.0% | |
| !! | TTAAGTTGGCATGCCAACCT+AGG | + | chr3_1:89193269-89193288 | Msa0385620:intron | 45.0% |
| ACATTAAAACCAGCCTGCCT+AGG | - | chr3_1:89193289-89193308 | None:intergenic | 45.0% | |
| AGTTGTGCAGTGTGCACTAA+CGG | - | chr3_1:89193446-89193465 | None:intergenic | 45.0% | |
| ! | AGTCTAGGGCAAACCATTGT+GGG | + | chr3_1:89193597-89193616 | Msa0385620:intron | 45.0% |
| CTTGCAGTTGGCAAAGTGAT+AGG | - | chr3_1:89193707-89193726 | None:intergenic | 45.0% | |
| CATTGTGGTGATACTTGAGC+AGG | + | chr3_1:89194227-89194246 | Msa0385620:CDS | 45.0% | |
| TTCGGAATTACCATGTGAGC+AGG | - | chr3_1:89194384-89194403 | None:intergenic | 45.0% | |
| ! | ACGTCTGGGACACTTGTAAA+TGG | + | chr3_1:89194728-89194747 | Msa0385620:CDS | 45.0% |
| CAACATTTGGCAGGTTGCAA+TGG | - | chr3_1:89194763-89194782 | None:intergenic | 45.0% | |
| TCCCAGTCAAGTTCTTCTGA+AGG | + | chr3_1:89194848-89194867 | Msa0385620:CDS | 45.0% | |
| CCCTTCAGAAGAACTTGACT+GGG | - | chr3_1:89194852-89194871 | None:intergenic | 45.0% | |
| CCCAGTCAAGTTCTTCTGAA+GGG | + | chr3_1:89194849-89194868 | Msa0385620:CDS | 45.0% | |
| ACCCTTCAGAAGAACTTGAC+TGG | - | chr3_1:89194853-89194872 | None:intergenic | 45.0% | |
| ! | AGATTAGACAAAGGCACGAG+TGG | + | chr3_1:89194920-89194939 | Msa0385620:CDS | 45.0% |
| ! | GATTAGACAAAGGCACGAGT+GGG | + | chr3_1:89194921-89194940 | Msa0385620:CDS | 45.0% |
| TGGGTTACTAGTTGTCGCTA+AGG | + | chr3_1:89194940-89194959 | Msa0385620:CDS | 45.0% | |
| TCAAGCTACGCACTATCAAG+AGG | + | chr3_1:89195119-89195138 | Msa0385620:CDS | 45.0% | |
| CAAGCTACGCACTATCAAGA+GGG | + | chr3_1:89195120-89195139 | Msa0385620:CDS | 45.0% | |
| TTATTAGGATCACGGCCAAC+AGG | - | chr3_1:89195202-89195221 | None:intergenic | 45.0% | |
| TTGGCCGTGATCCTAATAAC+CGG | + | chr3_1:89195203-89195222 | Msa0385620:CDS | 45.0% | |
| GAAGCCGGTTATTAGGATCA+CGG | - | chr3_1:89195210-89195229 | None:intergenic | 45.0% | |
| TGCGGCTAGTAGGTGATTTA+TGG | + | chr3_1:89195276-89195295 | Msa0385620:intron | 45.0% | |
| TGAGTGCAAACTATGGAGCA+TGG | - | chr3_1:89195539-89195558 | None:intergenic | 45.0% | |
| !! | TGCATTGGTTGAGTGGAAGT+TGG | + | chr3_1:89195834-89195853 | Msa0385620:CDS | 45.0% |
| GTTGAGTGGAAGTTGGAAAC+TGG | + | chr3_1:89195841-89195860 | Msa0385620:CDS | 45.0% | |
| ! | TCGACCATGTTTTACTCCGA+TGG | - | chr3_1:89195960-89195979 | None:intergenic | 45.0% |
| AAGGAAGGTGGTTGAAATGG+AGG | + | chr3_1:89196313-89196332 | Msa0385620:intron | 45.0% | |
| AAGGTGGTTGAAATGGAGGA+GGG | + | chr3_1:89196317-89196336 | Msa0385620:intron | 45.0% | |
| CACACATGACCAAACGATCT+AGG | - | chr3_1:89196584-89196603 | None:intergenic | 45.0% | |
| CTAGATCGTTTGGTCATGTG+TGG | + | chr3_1:89196582-89196601 | Msa0385620:intron | 45.0% | |
| ATGTTGTCAATCCCACCTAG+TGG | + | chr3_1:89196787-89196806 | Msa0385620:intron | 45.0% | |
| !! | CCAAGTCTTATTCCACTAGG+TGG | - | chr3_1:89196802-89196821 | None:intergenic | 45.0% |
| CCACCTAGTGGAATAAGACT+TGG | + | chr3_1:89196799-89196818 | Msa0385620:intron | 45.0% | |
| ! | CAGAGGTACACCCAAATACT+TGG | - | chr3_1:89196972-89196991 | None:intergenic | 45.0% |
| TATTTGGGTGTACCTCTGCT+AGG | + | chr3_1:89196974-89196993 | Msa0385620:CDS | 45.0% | |
| TATACCTCATCACCTAGCAG+AGG | - | chr3_1:89196989-89197008 | None:intergenic | 45.0% | |
| CTGCTAGGTGATGAGGTATA+TGG | + | chr3_1:89196989-89197008 | Msa0385620:CDS | 45.0% | |
| CTAGGTGATGAGGTATATGG+AGG | + | chr3_1:89196992-89197011 | Msa0385620:CDS | 45.0% | |
| ATATGGAGGGACGAAAAGCA+TGG | + | chr3_1:89197006-89197025 | Msa0385620:CDS | 45.0% | |
| !! | GCATGGTCTTGTCATTGCTA+CGG | + | chr3_1:89197023-89197042 | Msa0385620:CDS | 45.0% |
| AGAGTCAAAGCATGAAGGCA+AGG | - | chr3_1:89197109-89197128 | None:intergenic | 45.0% | |
| TGCCTTCATGCTTTGACTCT+CGG | + | chr3_1:89197109-89197128 | Msa0385620:CDS | 45.0% | |
| ! | GGTTTGGTTCATTGTCGTGT+AGG | + | chr3_1:89197219-89197238 | Msa0385620:intron | 45.0% |
| AGGTTTCAGCATCCTCATAC+AGG | + | chr3_1:89197239-89197258 | Msa0385620:intron | 45.0% | |
| GGTTTCAGCATCCTCATACA+GGG | + | chr3_1:89197240-89197259 | Msa0385620:intron | 45.0% | |
| GTTTCAGCATCCTCATACAG+GGG | + | chr3_1:89197241-89197260 | Msa0385620:CDS | 45.0% | |
| TTGAGCCAGCTTCGTAGAAT+TGG | + | chr3_1:89197311-89197330 | Msa0385620:CDS | 45.0% | |
| CACTACCAATTCTACGAAGC+TGG | - | chr3_1:89197319-89197338 | None:intergenic | 45.0% | |
| !!! | ATAATATTTTAATCAATAAT+GGG | - | chr3_1:89197441-89197460 | None:intergenic | 5.0% |
| !!! | TATAATATTTTAATCAATAA+TGG | - | chr3_1:89197442-89197461 | None:intergenic | 5.0% |
| ! | ACGCCGGCGTAATTCGTTTT+TGG | - | chr3_1:89192854-89192873 | None:intergenic | 50.0% |
| AATTTCTTCCAACCGCACGC+CGG | - | chr3_1:89192870-89192889 | None:intergenic | 50.0% | |
| GCTGGACTCGTTCATGTCAA+TGG | + | chr3_1:89192992-89193011 | Msa0385620:CDS | 50.0% | |
| TAAAACCAGCCTGCCTAGGT+TGG | - | chr3_1:89193285-89193304 | None:intergenic | 50.0% | |
| GACAAGAGCTATACAGCACC+AGG | - | chr3_1:89193575-89193594 | None:intergenic | 50.0% | |
| ! | GAGTCTAGGGCAAACCATTG+TGG | + | chr3_1:89193596-89193615 | Msa0385620:intron | 50.0% |
| TGTGCCGGAAAACATACCTC+TGG | + | chr3_1:89194317-89194336 | Msa0385620:CDS | 50.0% | |
| TCTATGGCATCAATTCGCCC+AGG | + | chr3_1:89194887-89194906 | Msa0385620:CDS | 50.0% | |
| CTATGGCATCAATTCGCCCA+GGG | + | chr3_1:89194888-89194907 | Msa0385620:CDS | 50.0% | |
| ! | GTCTACGTTAGTCTCACTGC+CGG | + | chr3_1:89195142-89195161 | Msa0385620:CDS | 50.0% |
| ! | TCTACGTTAGTCTCACTGCC+GGG | + | chr3_1:89195143-89195162 | Msa0385620:CDS | 50.0% |
| AGAAACTGGAGTAGGTACCC+CGG | - | chr3_1:89195164-89195183 | None:intergenic | 50.0% | |
| ACACGTCCAGAAACTGGAGT+AGG | - | chr3_1:89195172-89195191 | None:intergenic | 50.0% | |
| ! | TCCAGTTTCTGGACGTGTTG+AGG | + | chr3_1:89195174-89195193 | Msa0385620:CDS | 50.0% |
| ACCTCAACACGTCCAGAAAC+TGG | - | chr3_1:89195178-89195197 | None:intergenic | 50.0% | |
| CTACAGCGATCATACGAAGC+CGG | - | chr3_1:89195225-89195244 | None:intergenic | 50.0% | |
| CTTCGTATGATCGCTGTAGC+CGG | + | chr3_1:89195226-89195245 | Msa0385620:CDS | 50.0% | |
| TTCTGTGAAAGCCCGTCATG+CGG | + | chr3_1:89195258-89195277 | Msa0385620:CDS | 50.0% | |
| ATCACCTACTAGCCGCATGA+CGG | - | chr3_1:89195273-89195292 | None:intergenic | 50.0% | |
| !! | GTAGCTGTGCATTGGTTGAG+TGG | + | chr3_1:89195827-89195846 | Msa0385620:CDS | 50.0% |
| CATGGTCGAATTTCCATGGC+CGG | + | chr3_1:89195971-89195990 | Msa0385620:intron | 50.0% | |
| ATCTATGCAATGTCCGGCCA+TGG | - | chr3_1:89195987-89196006 | None:intergenic | 50.0% | |
| TTCTTAGGTGGAGAGTCGAG+AGG | + | chr3_1:89196067-89196086 | Msa0385620:intron | 50.0% | |
| GAAGGTGGTTGAAATGGAGG+AGG | + | chr3_1:89196316-89196335 | Msa0385620:intron | 50.0% | |
| GATCGTTTGGTCATGTGTGG+AGG | + | chr3_1:89196585-89196604 | Msa0385620:intron | 50.0% | |
| TCGTGCGCATGCCAAGTATT+TGG | + | chr3_1:89196958-89196977 | Msa0385620:CDS | 50.0% | |
| CGTGCGCATGCCAAGTATTT+GGG | + | chr3_1:89196959-89196978 | Msa0385620:CDS | 50.0% | |
| TGTACCTCTGCTAGGTGATG+AGG | + | chr3_1:89196982-89197001 | Msa0385620:CDS | 50.0% | |
| TGCAAACTCGGAGTTGTTCG+TGG | - | chr3_1:89197049-89197068 | None:intergenic | 50.0% | |
| GCCTTCATGCTTTGACTCTC+GGG | + | chr3_1:89197110-89197129 | Msa0385620:CDS | 50.0% | |
| ACCCGAGAGTCAAAGCATGA+AGG | - | chr3_1:89197114-89197133 | None:intergenic | 50.0% | |
| AAACGAATTACGCCGGCGTG+CGG | + | chr3_1:89192855-89192874 | Msa0385620:CDS | 55.0% | |
| AGAAAGGGCAACAGGCAACC+TGG | + | chr3_1:89193554-89193573 | Msa0385620:intron | 55.0% | |
| !! | AGGTGCTGGATGCACAACCT+AGG | - | chr3_1:89194702-89194721 | None:intergenic | 55.0% |
| TAGGTTGTGCATCCAGCACC+TGG | + | chr3_1:89194701-89194720 | Msa0385620:intron | 55.0% | |
| CAGCACCTGGCAATACGTCT+GGG | + | chr3_1:89194714-89194733 | Msa0385620:CDS | 55.0% | |
| AGTGTCCCAGACGTATTGCC+AGG | - | chr3_1:89194722-89194741 | None:intergenic | 55.0% | |
| ! | CTACGTTAGTCTCACTGCCG+GGG | + | chr3_1:89195144-89195163 | Msa0385620:CDS | 55.0% |
| ! | GGGGTACCTACTCCAGTTTC+TGG | + | chr3_1:89195163-89195182 | Msa0385620:CDS | 55.0% |
| GGACGTGTTGAGGTTCCTGT+TGG | + | chr3_1:89195184-89195203 | Msa0385620:CDS | 55.0% | |
| TCACCTACTAGCCGCATGAC+GGG | - | chr3_1:89195272-89195291 | None:intergenic | 55.0% | |
| GGAAACTGGACGCACTCATC+AGG | + | chr3_1:89195855-89195874 | Msa0385620:CDS | 55.0% | |
| GTTGGCATGCCAACCTAGGC+AGG | + | chr3_1:89193273-89193292 | Msa0385620:intron | 60.0% | |
| GCAGCAGTTGAGAGCTGTGC+CGG | + | chr3_1:89194302-89194321 | Msa0385620:CDS | 60.0% | |
| CCAGACGTATTGCCAGGTGC+TGG | - | chr3_1:89194716-89194735 | None:intergenic | 60.0% | |
| CCAGCACCTGGCAATACGTC+TGG | + | chr3_1:89194713-89194732 | Msa0385620:CDS | 60.0% | |
| AAGCCCGTCATGCGGCTAGT+AGG | + | chr3_1:89195266-89195285 | Msa0385620:CDS | 60.0% | |
| TGCTGGGGGTAGCTGTGCAT+TGG | + | chr3_1:89195819-89195838 | Msa0385620:CDS | 60.0% | |
| GCATCCTCATACAGGGGAGC+AGG | + | chr3_1:89197247-89197266 | Msa0385620:CDS | 60.0% | |
| TGCACCTGCTCCCCTGTATG+AGG | - | chr3_1:89197254-89197273 | None:intergenic | 60.0% | |
| GAATTACGCCGGCGTGCGGT+TGG | + | chr3_1:89192859-89192878 | Msa0385620:CDS | 65.0% | |
| GCATGCCAACCTAGGCAGGC+TGG | + | chr3_1:89193277-89193296 | Msa0385620:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 89192637 | 89197570 | 89192637 | ID=Msa0385620;Name=Msa0385620 |
| chr3_1 | mRNA | 89192637 | 89197570 | 89192637 | ID=Msa0385620-mRNA-1;Parent=Msa0385620;Name=Msa0385620-mRNA-1;_AED=0.08;_eAED=0.08;_QI=10|0.83|0.85|1|1|1|7|185|471 |
| chr3_1 | exon | 89192637 | 89193030 | 89192637 | ID=Msa0385620-mRNA-1:exon:24251;Parent=Msa0385620-mRNA-1 |
| chr3_1 | exon | 89194222 | 89194392 | 89194222 | ID=Msa0385620-mRNA-1:exon:24252;Parent=Msa0385620-mRNA-1 |
| chr3_1 | exon | 89194704 | 89194961 | 89194704 | ID=Msa0385620-mRNA-1:exon:24253;Parent=Msa0385620-mRNA-1 |
| chr3_1 | exon | 89195085 | 89195287 | 89195085 | ID=Msa0385620-mRNA-1:exon:24254;Parent=Msa0385620-mRNA-1 |
| chr3_1 | exon | 89195798 | 89195876 | 89195798 | ID=Msa0385620-mRNA-1:exon:24255;Parent=Msa0385620-mRNA-1 |
| chr3_1 | exon | 89196956 | 89197131 | 89196956 | ID=Msa0385620-mRNA-1:exon:24256;Parent=Msa0385620-mRNA-1 |
| chr3_1 | exon | 89197241 | 89197570 | 89197241 | ID=Msa0385620-mRNA-1:exon:24257;Parent=Msa0385620-mRNA-1 |
| chr3_1 | five_prime_UTR | 89192637 | 89192646 | 89192637 | ID=Msa0385620-mRNA-1:five_prime_utr;Parent=Msa0385620-mRNA-1 |
| chr3_1 | CDS | 89192647 | 89193030 | 89192647 | ID=Msa0385620-mRNA-1:cds;Parent=Msa0385620-mRNA-1 |
| chr3_1 | CDS | 89194222 | 89194392 | 89194222 | ID=Msa0385620-mRNA-1:cds;Parent=Msa0385620-mRNA-1 |
| chr3_1 | CDS | 89194704 | 89194961 | 89194704 | ID=Msa0385620-mRNA-1:cds;Parent=Msa0385620-mRNA-1 |
| chr3_1 | CDS | 89195085 | 89195287 | 89195085 | ID=Msa0385620-mRNA-1:cds;Parent=Msa0385620-mRNA-1 |
| chr3_1 | CDS | 89195798 | 89195876 | 89195798 | ID=Msa0385620-mRNA-1:cds;Parent=Msa0385620-mRNA-1 |
| chr3_1 | CDS | 89196956 | 89197131 | 89196956 | ID=Msa0385620-mRNA-1:cds;Parent=Msa0385620-mRNA-1 |
| chr3_1 | CDS | 89197241 | 89197385 | 89197241 | ID=Msa0385620-mRNA-1:cds;Parent=Msa0385620-mRNA-1 |
| chr3_1 | three_prime_UTR | 89197386 | 89197570 | 89197386 | ID=Msa0385620-mRNA-1:three_prime_utr;Parent=Msa0385620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
