AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0691100


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0691100 MtrunA17_Chr4g0040041 91.124 507 2 1 1 507 1 464 0.0 926
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0691100 AT4G27600.1 64.889 450 97 3 61 506 79 471 0.0 581

Find 141 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATCATATGAAAGAATTT+TGG 0.146678 4_4:-59046446 None:intergenic
AGAGACATTATGATCATTTC+TGG 0.149192 4_4:+59045100 Msa0691100:CDS
TGAGGAGTTCCTGAAGAATT+TGG 0.171687 4_4:+59043478 Msa0691100:CDS
ATATAAGGAAGAAGCTAATT+TGG 0.177255 4_4:+59043790 Msa0691100:CDS
TATAAGAACATAAGAGAAAA+TGG 0.199422 4_4:-59042612 None:intergenic
CCTAAAACATCCCATCTTTC+AGG 0.215574 4_4:-59042853 None:intergenic
ATTGCAGAAGATAAGGAAAA+AGG 0.231214 4_4:-59042370 None:intergenic
TCTGTAAAACTTGAATTTAA+AGG 0.277975 4_4:+59042309 Msa0691100:five_prime_UTR
CACACGATATTATTGTTATT+AGG 0.286384 4_4:+59046578 Msa0691100:three_prime_UTR
TTTCTAATCCCAAATTCTTC+AGG 0.293243 4_4:-59043487 None:intergenic
AAATGGGCAGTGCGGGAATT+TGG 0.294279 4_4:-59042595 None:intergenic
GGCTCTTACATAGGCGTAAA+AGG 0.296593 4_4:+59046133 Msa0691100:CDS
TTTACAATGAAAGTATTTAC+AGG 0.309375 4_4:-59046504 None:intergenic
GTTATTGCTTTAATAGTATC+AGG 0.310002 4_4:-59045006 None:intergenic
AATTTCAGATGCAGTCAAAT+TGG 0.322488 4_4:+59046336 Msa0691100:CDS
GAGGAGTTCCTGAAGAATTT+GGG 0.335077 4_4:+59043479 Msa0691100:CDS
CATCATCTTCTTCTTCATCA+TGG 0.338563 4_4:-59042744 None:intergenic
CTGTAAAACTTGAATTTAAA+GGG 0.347701 4_4:+59042310 Msa0691100:five_prime_UTR
TTCTAATACTTTAGTTGCCT+TGG 0.350723 4_4:+59043604 Msa0691100:CDS
GTTCTCTGATCAAATTGTTA+TGG 0.364257 4_4:+59043739 Msa0691100:CDS
ATGAAGAGACACAAAGAAAT+TGG 0.370725 4_4:-59042430 None:intergenic
GAAGAATTTGGGATTAGAAA+AGG 0.371489 4_4:+59043490 Msa0691100:CDS
CAGTGTGGCGAGCGATCTAT+TGG 0.383914 4_4:+59043682 Msa0691100:CDS
CCCTCCTTCTCCATGTGTTC+CGG 0.393076 4_4:+59046171 Msa0691100:CDS
CCTATCAAGGATGCGACAAC+TGG 0.393747 4_4:+59044000 Msa0691100:CDS
CCAGTTGTCGCATCCTTGAT+AGG 0.394333 4_4:-59044000 None:intergenic
ATCTATTGGGTGGCTTCTAC+AGG 0.397421 4_4:+59043696 Msa0691100:CDS
AGCAATAACAAAAGCTTGTA+AGG 0.402404 4_4:+59045020 Msa0691100:CDS
TTAGTTGCCTTGGCAAGGCT+TGG 0.404584 4_4:+59043614 Msa0691100:CDS
TTGTTATGGCTACTTACGTT+GGG 0.405714 4_4:+59043753 Msa0691100:CDS
AGCTAGGAGTAACGGTGCTT+TGG 0.411129 4_4:+59045044 Msa0691100:CDS
AACTTGATACATCCGTTGTT+AGG 0.411138 4_4:+59046377 Msa0691100:CDS
ATTTCTTTCTGCACCTATCA+AGG 0.411704 4_4:+59043987 Msa0691100:CDS
AGCCACTGTTGTTGCACAGC+AGG 0.416821 4_4:+59046300 Msa0691100:CDS
TAATTAAACAGTACCGATAT+CGG 0.419189 4_4:-59046401 None:intergenic
AGCATTGTGCGTTGAGCATC+TGG 0.419386 4_4:-59044045 None:intergenic
CCATTCAACAGGGAAATTGT+AGG 0.424167 4_4:+59045971 Msa0691100:intron
AAAGAAATTGGTTGTGGCTA+TGG 0.426379 4_4:-59042418 None:intergenic
TGTCAACTTCGACACTTCCT+TGG 0.432059 4_4:+59044927 Msa0691100:CDS
AAGAATTTGGGATTAGAAAA+GGG 0.447972 4_4:+59043491 Msa0691100:CDS
GTGTCGGATTTAAGAAATAT+AGG 0.450420 4_4:+59046256 Msa0691100:CDS
CAAAAGCTTGTAAGGAAGCT+AGG 0.453074 4_4:+59045028 Msa0691100:CDS
CGGGAATTTGGTAATTGAGA+TGG 0.455946 4_4:-59042583 None:intergenic
ACCAACATACTTGTTGTTGA+AGG 0.456941 4_4:+59044967 Msa0691100:CDS
ACCTCCACCAAAGGTTGAAA+AGG 0.462556 4_4:-59042692 None:intergenic
TGCAGCTATAAAGCCGCGGC+TGG 0.464008 4_4:+59043572 Msa0691100:CDS
AAGTTGAAATTCAAAAGATT+CGG 0.464216 4_4:-59046359 None:intergenic
AAAATTCTTTCATATGATGA+AGG 0.468865 4_4:+59046448 Msa0691100:three_prime_UTR
TTTGAAGACACCACGCTGAA+TGG 0.471784 4_4:-59042662 None:intergenic
GGGAATTTGGTAATTGAGAT+GGG 0.475820 4_4:-59042582 None:intergenic
TAATATCGTGTGATGAAGAA+TGG 0.477145 4_4:-59046567 None:intergenic
GCTGGTGATGCATATGCATC+TGG 0.479499 4_4:+59046208 Msa0691100:CDS
GGATGGAATTGCAGAAGATA+AGG 0.480590 4_4:-59042377 None:intergenic
CCGGTAGACACTTGTGGTGC+TGG 0.480771 4_4:+59046190 Msa0691100:CDS
TCCGTTGTTAGGTCCGATAT+CGG 0.481454 4_4:+59046388 Msa0691100:CDS
AAGATGATGAGCAACAGATT+AGG 0.484895 4_4:+59042758 Msa0691100:CDS
ACGCACAATGCTTGCATACC+AGG 0.486607 4_4:+59044056 Msa0691100:CDS
GTTGCCTTGGCAAGGCTTGG+AGG 0.487942 4_4:+59043617 Msa0691100:CDS
TTGTAAAAGAATAGCTATGC+TGG 0.488952 4_4:+59046520 Msa0691100:three_prime_UTR
CATGTCATTGAAGTGGGTTG+TGG 0.490229 4_4:+59046675 Msa0691100:three_prime_UTR
GGCTATGGCTATGGCAATGA+TGG 0.490561 4_4:-59042403 None:intergenic
GCTATAAATGTGGCAATGGC+TGG 0.495219 4_4:+59043659 Msa0691100:CDS
TAAGAGAAAATGGGCAGTGC+GGG 0.495550 4_4:-59042602 None:intergenic
TTTAGGGCTTGGACAAGCTA+TGG 0.496529 4_4:+59042870 Msa0691100:CDS
ATAAGAACATAAGAGAAAAT+GGG 0.500877 4_4:-59042611 None:intergenic
TGCTGGCAATTAAATTACTT+AGG 0.506403 4_4:+59046537 Msa0691100:three_prime_UTR
TTTATAGCTGCAACCATCCA+TGG 0.506445 4_4:-59043561 None:intergenic
ATCATAATGTCTCTCAATGC+AGG 0.507542 4_4:-59045091 None:intergenic
GCCATTGCCACATTTATAGC+AGG 0.508000 4_4:-59043656 None:intergenic
ACCCACTTCATATTACATAT+AGG 0.510201 4_4:-59046626 None:intergenic
TTGTTCCATGTCATTGAAGT+GGG 0.516473 4_4:+59046669 Msa0691100:three_prime_UTR
TACCTATATGTAATATGAAG+TGG 0.517428 4_4:+59046624 Msa0691100:three_prime_UTR
TTTGTTCCATGTCATTGAAG+TGG 0.518391 4_4:+59046668 Msa0691100:three_prime_UTR
CTTTAGCTCAGATTATTGAC+CGG 0.518472 4_4:-59042273 None:intergenic
GCCTCGGAGACCATCGGTAA+CGG 0.521634 4_4:-59046113 None:intergenic
AAAGAAATTGCACATTTGCT+CGG 0.523683 4_4:-59043972 None:intergenic
GGTCTCCGAGGCTCTTACAT+AGG 0.529019 4_4:+59046124 Msa0691100:CDS
CACAACCCACTTCAATGACA+TGG 0.529458 4_4:-59046674 None:intergenic
TATGCATCTGGCATATTGTA+TGG 0.530322 4_4:+59046220 Msa0691100:CDS
AAAGCACTGTTTCTGTTACA+AGG 0.531055 4_4:+59046062 Msa0691100:CDS
TATAGGTACAATAGCAGCTA+AGG 0.531215 4_4:+59046273 Msa0691100:CDS
ATGAGCAACAGATTAGGACT+AGG 0.531791 4_4:+59042764 Msa0691100:CDS
ATACTTTAGTTGCCTTGGCA+AGG 0.531967 4_4:+59043609 Msa0691100:CDS
TATAAACGCAGACGCGTGTA+CGG 0.540717 4_4:+59042631 Msa0691100:CDS
TCCTGCTATAAATGTGGCAA+TGG 0.541036 4_4:+59043655 Msa0691100:CDS
AGTGTGGCGAGCGATCTATT+GGG 0.541135 4_4:+59043683 Msa0691100:CDS
CTTGTAAATCATGAGGAAAG+AGG 0.549271 4_4:+59043524 Msa0691100:CDS
AGACACAAAGAAATTGGTTG+TGG 0.549435 4_4:-59042424 None:intergenic
GAGGATGATGATGAAGAAGA+AGG 0.550206 4_4:+59042808 Msa0691100:CDS
AGCTATAAAGCCGCGGCTGG+TGG 0.554611 4_4:+59043575 Msa0691100:CDS
CTTAGAAACTGCACTTGCCA+AGG 0.558762 4_4:-59044944 None:intergenic
ACCTATATGTAATATGAAGT+GGG 0.562440 4_4:+59046625 Msa0691100:three_prime_UTR
CAAGTGTCTACCGGAACACA+TGG 0.562852 4_4:-59046181 None:intergenic
CAACAGATTAGGACTAGGGC+TGG 0.563630 4_4:+59042769 Msa0691100:CDS
CTTCTCTGGCACAGTTGATG+AGG 0.569230 4_4:+59043460 Msa0691100:CDS
TGGGATTAGAAAAGGGAACA+AGG 0.569284 4_4:+59043498 Msa0691100:CDS
AAATTCAGCACCTCCACCAA+AGG 0.573922 4_4:-59042701 None:intergenic
GCGACCTCCAAGCCTTGCCA+AGG 0.575335 4_4:-59043621 None:intergenic
AATCTTCGCGAACGCTGATG+AGG 0.575683 4_4:+59046009 Msa0691100:CDS
TGGCTATGGCAATGATGGAA+TGG 0.578180 4_4:-59042398 None:intergenic
TTGTTGCACAGCAGGGAACA+AGG 0.580537 4_4:+59046308 Msa0691100:CDS
TTACGCCTATGTAAGAGCCT+CGG 0.581757 4_4:-59046129 None:intergenic
ATTGGTTGTGGCTATGGCTA+TGG 0.583345 4_4:-59042412 None:intergenic
ATTGTTATGGCTACTTACGT+TGG 0.584559 4_4:+59043752 Msa0691100:CDS
GGCTGGTGATGAAGATGAAG+TGG 0.589059 4_4:+59042786 Msa0691100:CDS
ATATGTAATATGAAGTGGGT+TGG 0.590115 4_4:+59046629 Msa0691100:three_prime_UTR
GCCACTGTTGTTGCACAGCA+GGG 0.593186 4_4:+59046301 Msa0691100:CDS
ACCTTCAACAACAAGTATGT+TGG 0.598982 4_4:-59044968 None:intergenic
ACCGGAACACATGGAGAAGG+AGG 0.600561 4_4:-59046172 None:intergenic
TGAGCAACAGATTAGGACTA+GGG 0.602719 4_4:+59042765 Msa0691100:CDS
CCAGCACCACAAGTGTCTAC+CGG 0.605293 4_4:-59046190 None:intergenic
GTAAGAGCCTCGGAGACCAT+CGG 0.605674 4_4:-59046119 None:intergenic
TGTTATGGCTACTTACGTTG+GGG 0.606037 4_4:+59043754 Msa0691100:CDS
CAGAGAACAGTGCAGTTACG+AGG 0.610889 4_4:-59043724 None:intergenic
AATTGAGATGGGAAAGAGTG+TGG 0.615565 4_4:-59042571 None:intergenic
AGAAAGAGATCCACCAGCCG+CGG 0.617726 4_4:-59043585 None:intergenic
GGACTTATGAAACATATCAA+AGG 0.620946 4_4:-59046483 None:intergenic
TATGGCAATGATGGAATGGA+TGG 0.621443 4_4:-59042394 None:intergenic
AGAGTGTGGAAATGAATGAG+AGG 0.624919 4_4:-59042557 None:intergenic
AGGATGATGATGAAGAAGAA+GGG 0.626206 4_4:+59042809 Msa0691100:CDS
AAGGAAACTTGTAAATCATG+AGG 0.626570 4_4:+59043517 Msa0691100:CDS
TCGAGATCCTGCTATAAATG+TGG 0.626575 4_4:+59043649 Msa0691100:CDS
TGTAAGGAAGCTAGGAGTAA+CGG 0.626889 4_4:+59045036 Msa0691100:CDS
GGAACAAATACGAAATGACA+TGG 0.628371 4_4:-59046653 None:intergenic
CCTCTAGTATCCGTTACCGA+TGG 0.630285 4_4:+59046103 Msa0691100:CDS
TGGTGATGAAGATGAAGTGG+AGG 0.631357 4_4:+59042789 Msa0691100:CDS
ACCGATATCGGACCTAACAA+CGG 0.634403 4_4:-59046389 None:intergenic
TCCGTTACCGATGGTCTCCG+AGG 0.636605 4_4:+59046112 Msa0691100:CDS
TCCCTGCTGTGCAACAACAG+TGG 0.645669 4_4:-59046302 None:intergenic
AATTGTATAGAAATGAGAGA+AGG 0.652255 4_4:-59043820 None:intergenic
CATCGGTAACGGATACTAGA+GGG 0.659674 4_4:-59046102 None:intergenic
CCATCGGTAACGGATACTAG+AGG 0.659811 4_4:-59046103 None:intergenic
TCTACCGGAACACATGGAGA+AGG 0.666277 4_4:-59046175 None:intergenic
GTGGCGAGCGATCTATTGGG+TGG 0.668623 4_4:+59043686 Msa0691100:CDS
CCGGAACACATGGAGAAGGA+GGG 0.669249 4_4:-59046171 None:intergenic
AGAGAACAGTGCAGTTACGA+GGG 0.672934 4_4:-59043723 None:intergenic
ATAAGAGAAAATGGGCAGTG+CGG 0.690018 4_4:-59042603 None:intergenic
TGGTTGCAGCTATAAAGCCG+CGG 0.697252 4_4:+59043568 Msa0691100:CDS
TGTGGCAATGGCTGGCAGTG+TGG 0.708642 4_4:+59043667 Msa0691100:CDS
GGTTCATCTTCCATTCAGCG+TGG 0.721716 4_4:+59042652 Msa0691100:CDS
TGTGTTCCGGTAGACACTTG+TGG 0.728781 4_4:+59046184 Msa0691100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCATAATAAAAGTTATAAA+TGG - chr4_4:59043176-59043195 None:intergenic 10.0%
!!! AATTTTTATTTCATTATGAA+TGG + chr4_4:59044342-59044361 Msa0691100:intron 10.0%
!! TAAGCTATTTATATAACAAA+AGG - chr4_4:59043061-59043080 None:intergenic 15.0%
!! ATAATCAATAACAATATTGT+GGG - chr4_4:59044596-59044615 None:intergenic 15.0%
!! AATAATCAATAACAATATTG+TGG - chr4_4:59044597-59044616 None:intergenic 15.0%
!! AATTGTATTTACCTTTATTA+TGG + chr4_4:59044795-59044814 Msa0691100:intron 15.0%
!! TCTGTAAAACTTGAATTTAA+AGG + chr4_4:59042309-59042328 Msa0691100:five_prime_UTR 20.0%
!! CTGTAAAACTTGAATTTAAA+GGG + chr4_4:59042310-59042329 Msa0691100:five_prime_UTR 20.0%
!! ATAAGAACATAAGAGAAAAT+GGG - chr4_4:59042614-59042633 None:intergenic 20.0%
!! TATAAGAACATAAGAGAAAA+TGG - chr4_4:59042615-59042634 None:intergenic 20.0%
!! GCAAATAAACAATAATTGAA+GGG - chr4_4:59043322-59043341 None:intergenic 20.0%
!! AGCAAATAAACAATAATTGA+AGG - chr4_4:59043323-59043342 None:intergenic 20.0%
!! TTCAATTATTGTTTATTTGC+TGG + chr4_4:59043322-59043341 Msa0691100:intron 20.0%
!! TCAATTATTGTTTATTTGCT+GGG + chr4_4:59043323-59043342 Msa0691100:intron 20.0%
!! ATATAGATACATCATACAAT+TGG + chr4_4:59043385-59043404 Msa0691100:intron 20.0%
!!! CTTTTGTTTTTTCAATTTTG+CGG + chr4_4:59044835-59044854 Msa0691100:intron 20.0%
!! TCATTATATGAACTAATGAA+GGG + chr4_4:59044858-59044877 Msa0691100:intron 20.0%
!! TTCATTATTATTAGAGAACA+AGG - chr4_4:59045245-59045264 None:intergenic 20.0%
!!! TAATGAATAGTGAATTTGTT+AGG + chr4_4:59045258-59045277 Msa0691100:intron 20.0%
!!! AATGAATAGTGAATTTGTTA+GGG + chr4_4:59045259-59045278 Msa0691100:intron 20.0%
!!! ATCTGTGTTTTATAAAATGT+GGG + chr4_4:59045411-59045430 Msa0691100:intron 20.0%
!! TTGTTGCAAGTTAAATTATT+TGG - chr4_4:59045688-59045707 None:intergenic 20.0%
!!! AATGCTTTATCTTTAATTTC+TGG - chr4_4:59045731-59045750 None:intergenic 20.0%
!! AAGTTGAAATTCAAAAGATT+CGG - chr4_4:59046362-59046381 None:intergenic 20.0%
!!! TTCATCATATGAAAGAATTT+TGG - chr4_4:59046449-59046468 None:intergenic 20.0%
!! AAAATTCTTTCATATGATGA+AGG + chr4_4:59046448-59046467 Msa0691100:three_prime_UTR 20.0%
!!! TTTACAATGAAAGTATTTAC+AGG - chr4_4:59046507-59046526 None:intergenic 20.0%
!!! TTTTGTTTTTCCTGAAAGAT+GGG + chr4_4:59042843-59042862 Msa0691100:CDS 25.0%
! ACTAATGCACTTATATGATA+AGG + chr4_4:59043082-59043101 Msa0691100:intron 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG + chr4_4:59043110-59043129 Msa0691100:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG + chr4_4:59043111-59043130 Msa0691100:intron 25.0%
! TCTTACAAGTTACAAGTAAA+GGG - chr4_4:59043240-59043259 None:intergenic 25.0%
! TTCTTACAAGTTACAAGTAA+AGG - chr4_4:59043241-59043260 None:intergenic 25.0%
!! TAATAATGTTGACTGTTTGA+AGG - chr4_4:59043295-59043314 None:intergenic 25.0%
!! AAGAATTTGGGATTAGAAAA+GGG + chr4_4:59043491-59043510 Msa0691100:CDS 25.0%
! ATATAAGGAAGAAGCTAATT+TGG + chr4_4:59043790-59043809 Msa0691100:CDS 25.0%
! AATTGTATAGAAATGAGAGA+AGG - chr4_4:59043823-59043842 None:intergenic 25.0%
! AATGTAAAGTATATTGAACC+TGG - chr4_4:59044077-59044096 None:intergenic 25.0%
!! TTCTTGAGAAGATATTTCTA+AGG + chr4_4:59044129-59044148 Msa0691100:intron 25.0%
! ATATTGAATCAATCAACAGT+AGG + chr4_4:59044270-59044289 Msa0691100:intron 25.0%
! TGGAACTTAAATGTTAAAGA+AGG - chr4_4:59044385-59044404 None:intergenic 25.0%
!! TAACATTTAAGTTCCATCAA+TGG + chr4_4:59044389-59044408 Msa0691100:intron 25.0%
! AAAGTAAGTTTAATGTTTCC+AGG - chr4_4:59044559-59044578 None:intergenic 25.0%
!!! ATGCTATTTCAGGAAATTTT+AGG + chr4_4:59044761-59044780 Msa0691100:intron 25.0%
! CATAGATTTAGCCATAATAA+AGG - chr4_4:59044809-59044828 None:intergenic 25.0%
! CTTTATTATGGCTAAATCTA+TGG + chr4_4:59044807-59044826 Msa0691100:intron 25.0%
! GTCATTATATGAACTAATGA+AGG + chr4_4:59044857-59044876 Msa0691100:intron 25.0%
! GTTATTGCTTTAATAGTATC+AGG - chr4_4:59045009-59045028 None:intergenic 25.0%
! ACAGATGAATACCAAAATTA+GGG - chr4_4:59045397-59045416 None:intergenic 25.0%
!! CATCTGTGTTTTATAAAATG+TGG + chr4_4:59045410-59045429 Msa0691100:intron 25.0%
!!! TAATTTAACTTGCAACAACT+CGG + chr4_4:59045690-59045709 Msa0691100:intron 25.0%
!! TAGGTTCTGATCTTAATTAA+TGG - chr4_4:59045840-59045859 None:intergenic 25.0%
!!! TCTATGTAATTTTGATGCAA+AGG + chr4_4:59046039-59046058 Msa0691100:CDS 25.0%
!!! ATATTGTATGGTGTTTTAAG+AGG + chr4_4:59046232-59046251 Msa0691100:CDS 25.0%
!!! TAATTAAACAGTACCGATAT+CGG - chr4_4:59046404-59046423 None:intergenic 25.0%
!!! GAATTTTGGAACTAAATACA+AGG - chr4_4:59046435-59046454 None:intergenic 25.0%
!! CACACGATATTATTGTTATT+AGG + chr4_4:59046578-59046597 Msa0691100:three_prime_UTR 25.0%
! TACCTATATGTAATATGAAG+TGG + chr4_4:59046624-59046643 Msa0691100:three_prime_UTR 25.0%
! ACCTATATGTAATATGAAGT+GGG + chr4_4:59046625-59046644 Msa0691100:three_prime_UTR 25.0%
TTGCAGAAGATAAGGAAAAA+GGG - chr4_4:59042372-59042391 None:intergenic 30.0%
ATTGCAGAAGATAAGGAAAA+AGG - chr4_4:59042373-59042392 None:intergenic 30.0%
ATGAAGAGACACAAAGAAAT+TGG - chr4_4:59042433-59042452 None:intergenic 30.0%
!!! CTTTTGTTTTTCCTGAAAGA+TGG + chr4_4:59042842-59042861 Msa0691100:CDS 30.0%
CATTTCTCATTCAATGTACT+TGG + chr4_4:59042906-59042925 Msa0691100:intron 30.0%
!! GTTGTTTTGCGAATTCTTTT+AGG + chr4_4:59043433-59043452 Msa0691100:intron 30.0%
TTTCTAATCCCAAATTCTTC+AGG - chr4_4:59043490-59043509 None:intergenic 30.0%
! GAAGAATTTGGGATTAGAAA+AGG + chr4_4:59043490-59043509 Msa0691100:CDS 30.0%
AAGGAAACTTGTAAATCATG+AGG + chr4_4:59043517-59043536 Msa0691100:CDS 30.0%
TTCTAATACTTTAGTTGCCT+TGG + chr4_4:59043604-59043623 Msa0691100:CDS 30.0%
GTTCTCTGATCAAATTGTTA+TGG + chr4_4:59043739-59043758 Msa0691100:CDS 30.0%
!!! GGCTGTTTTAGTTTCATATA+AGG + chr4_4:59043775-59043794 Msa0691100:CDS 30.0%
AAAAGAATGCTTCTCACTTA+TGG - chr4_4:59043890-59043909 None:intergenic 30.0%
!!! ATAAGTGAGAAGCATTCTTT+TGG + chr4_4:59043889-59043908 Msa0691100:intron 30.0%
! TTTGGTTGGATTTTGCAATA+TGG + chr4_4:59043907-59043926 Msa0691100:intron 30.0%
AAAGAAATTGCACATTTGCT+CGG - chr4_4:59043975-59043994 None:intergenic 30.0%
TAAACTTACTTTCGATGCAT+TGG + chr4_4:59044567-59044586 Msa0691100:intron 30.0%
AAACTTACTTTCGATGCATT+GGG + chr4_4:59044568-59044587 Msa0691100:intron 30.0%
!! ATTCACTTGTATGCTATTTC+AGG + chr4_4:59044751-59044770 Msa0691100:intron 30.0%
AGCAATAACAAAAGCTTGTA+AGG + chr4_4:59045020-59045039 Msa0691100:CDS 30.0%
AGAGACATTATGATCATTTC+TGG + chr4_4:59045100-59045119 Msa0691100:CDS 30.0%
TCCACTTTATGTCAAAATGA+TGG + chr4_4:59045171-59045190 Msa0691100:intron 30.0%
TTTGTTAGGGTAAAGTGTAA+TGG + chr4_4:59045272-59045291 Msa0691100:intron 30.0%
AATACCAAAATTAGGGGATA+TGG - chr4_4:59045390-59045409 None:intergenic 30.0%
CAGATGAATACCAAAATTAG+GGG - chr4_4:59045396-59045415 None:intergenic 30.0%
CACAGATGAATACCAAAATT+AGG - chr4_4:59045398-59045417 None:intergenic 30.0%
ATAGTATCACACCACATTTA+CGG - chr4_4:59045457-59045476 None:intergenic 30.0%
TTGAAAGCGAATAACAGTAA+AGG - chr4_4:59045563-59045582 None:intergenic 30.0%
GTACGATTTACAAGAATACA+CGG + chr4_4:59045775-59045794 Msa0691100:intron 30.0%
TACGATTTACAAGAATACAC+GGG + chr4_4:59045776-59045795 Msa0691100:intron 30.0%
AAGATCAGAACCTAATCTTA+CGG + chr4_4:59045846-59045865 Msa0691100:intron 30.0%
! GTTTAAGATAAACGATATGC+AGG + chr4_4:59045903-59045922 Msa0691100:intron 30.0%
TTGTATTTGTCCATTCAACA+GGG + chr4_4:59045961-59045980 Msa0691100:intron 30.0%
GTGTCGGATTTAAGAAATAT+AGG + chr4_4:59046256-59046275 Msa0691100:CDS 30.0%
AATTTCAGATGCAGTCAAAT+TGG + chr4_4:59046336-59046355 Msa0691100:CDS 30.0%
GGACTTATGAAACATATCAA+AGG - chr4_4:59046486-59046505 None:intergenic 30.0%
TTGTAAAAGAATAGCTATGC+TGG + chr4_4:59046520-59046539 Msa0691100:three_prime_UTR 30.0%
TGCTGGCAATTAAATTACTT+AGG + chr4_4:59046537-59046556 Msa0691100:three_prime_UTR 30.0%
TAATATCGTGTGATGAAGAA+TGG - chr4_4:59046570-59046589 None:intergenic 30.0%
ACCCACTTCATATTACATAT+AGG - chr4_4:59046629-59046648 None:intergenic 30.0%
ATATGTAATATGAAGTGGGT+TGG + chr4_4:59046629-59046648 Msa0691100:three_prime_UTR 30.0%
! CTTTAGCTCAGATTATTGAC+CGG - chr4_4:59042276-59042295 None:intergenic 35.0%
GAAAAAGGGAAGAAGAAGAA+TGG - chr4_4:59042358-59042377 None:intergenic 35.0%
AAAGAAATTGGTTGTGGCTA+TGG - chr4_4:59042421-59042440 None:intergenic 35.0%
AGACACAAAGAAATTGGTTG+TGG - chr4_4:59042427-59042446 None:intergenic 35.0%
! GGGAATTTGGTAATTGAGAT+GGG - chr4_4:59042585-59042604 None:intergenic 35.0%
! GTATGTTCCTTTTCAACCTT+TGG + chr4_4:59042685-59042704 Msa0691100:CDS 35.0%
CATCATCTTCTTCTTCATCA+TGG - chr4_4:59042747-59042766 None:intergenic 35.0%
AAGATGATGAGCAACAGATT+AGG + chr4_4:59042758-59042777 Msa0691100:CDS 35.0%
! AGGATGATGATGAAGAAGAA+GGG + chr4_4:59042809-59042828 Msa0691100:CDS 35.0%
! CTGAAAGATGGGATGTTTTA+GGG + chr4_4:59042854-59042873 Msa0691100:CDS 35.0%
CATTCAATGTACTTGGAAGT+TGG + chr4_4:59042913-59042932 Msa0691100:intron 35.0%
! TGTTTATCCAAACAGGGTTT+TGG + chr4_4:59043117-59043136 Msa0691100:intron 35.0%
AGTATTTCCAAAACCCTGTT+TGG - chr4_4:59043127-59043146 None:intergenic 35.0%
!! TTCTTTTAGGTAGACTTCTC+TGG + chr4_4:59043446-59043465 Msa0691100:intron 35.0%
CTTGTAAATCATGAGGAAAG+AGG + chr4_4:59043524-59043543 Msa0691100:CDS 35.0%
ATTGTTATGGCTACTTACGT+TGG + chr4_4:59043752-59043771 Msa0691100:CDS 35.0%
TTGTTATGGCTACTTACGTT+GGG + chr4_4:59043753-59043772 Msa0691100:CDS 35.0%
ATTTCTTTCTGCACCTATCA+AGG + chr4_4:59043987-59044006 Msa0691100:CDS 35.0%
AGAATTCTCAAAGTGCAACA+TGG - chr4_4:59044113-59044132 None:intergenic 35.0%
! TTGAAATGCTTTGTTCAACC+TGG + chr4_4:59044538-59044557 Msa0691100:intron 35.0%
TGTATTGTGTATAGTCAGCA+AGG - chr4_4:59044654-59044673 None:intergenic 35.0%
! ACGCTAATATTTCTGTACTC+TGG + chr4_4:59044884-59044903 Msa0691100:intron 35.0%
!! ACCAACATACTTGTTGTTGA+AGG + chr4_4:59044967-59044986 Msa0691100:CDS 35.0%
ACCTTCAACAACAAGTATGT+TGG - chr4_4:59044971-59044990 None:intergenic 35.0%
ATCATAATGTCTCTCAATGC+AGG - chr4_4:59045094-59045113 None:intergenic 35.0%
!! GCCATCATTTTGACATAAAG+TGG - chr4_4:59045175-59045194 None:intergenic 35.0%
TATTATTAGAGAACAAGGCC+AGG - chr4_4:59045240-59045259 None:intergenic 35.0%
GTCATTGTTCAGAACTAACA+CGG - chr4_4:59045344-59045363 None:intergenic 35.0%
TAGTATCACACCACATTTAC+GGG - chr4_4:59045456-59045475 None:intergenic 35.0%
TATGCGTGTGATGATAAGTA+TGG + chr4_4:59045483-59045502 Msa0691100:intron 35.0%
CCTAGTTATCTCTTATTACC+AGG - chr4_4:59045601-59045620 None:intergenic 35.0%
CCTGGTAATAAGAGATAACT+AGG + chr4_4:59045598-59045617 Msa0691100:intron 35.0%
!! GAGATAACTAGGTTTTGTGA+AGG + chr4_4:59045609-59045628 Msa0691100:intron 35.0%
!! TAACTAGGTTTTGTGAAGGA+TGG + chr4_4:59045613-59045632 Msa0691100:intron 35.0%
GATAGCCTAATCAAACTTGT+CGG + chr4_4:59045660-59045679 Msa0691100:intron 35.0%
CTTGTATTTGTCCATTCAAC+AGG + chr4_4:59045960-59045979 Msa0691100:intron 35.0%
!! AAAGCACTGTTTCTGTTACA+AGG + chr4_4:59046062-59046081 Msa0691100:CDS 35.0%
TATGCATCTGGCATATTGTA+TGG + chr4_4:59046220-59046239 Msa0691100:CDS 35.0%
TATAGGTACAATAGCAGCTA+AGG + chr4_4:59046273-59046292 Msa0691100:CDS 35.0%
AACTTGATACATCCGTTGTT+AGG + chr4_4:59046377-59046396 Msa0691100:CDS 35.0%
GGAACAAATACGAAATGACA+TGG - chr4_4:59046656-59046675 None:intergenic 35.0%
TTTGTTCCATGTCATTGAAG+TGG + chr4_4:59046668-59046687 Msa0691100:three_prime_UTR 35.0%
TTGTTCCATGTCATTGAAGT+GGG + chr4_4:59046669-59046688 Msa0691100:three_prime_UTR 35.0%
GGATGGAATTGCAGAAGATA+AGG - chr4_4:59042380-59042399 None:intergenic 40.0%
! TATGGCAATGATGGAATGGA+TGG - chr4_4:59042397-59042416 None:intergenic 40.0%
AGAGTGTGGAAATGAATGAG+AGG - chr4_4:59042560-59042579 None:intergenic 40.0%
AATTGAGATGGGAAAGAGTG+TGG - chr4_4:59042574-59042593 None:intergenic 40.0%
! CGGGAATTTGGTAATTGAGA+TGG - chr4_4:59042586-59042605 None:intergenic 40.0%
ATAAGAGAAAATGGGCAGTG+CGG - chr4_4:59042606-59042625 None:intergenic 40.0%
! TGTTCCTTTTCAACCTTTGG+TGG + chr4_4:59042688-59042707 Msa0691100:CDS 40.0%
ATGAGCAACAGATTAGGACT+AGG + chr4_4:59042764-59042783 Msa0691100:CDS 40.0%
TGAGCAACAGATTAGGACTA+GGG + chr4_4:59042765-59042784 Msa0691100:CDS 40.0%
! GAGGATGATGATGAAGAAGA+AGG + chr4_4:59042808-59042827 Msa0691100:CDS 40.0%
CCTAAAACATCCCATCTTTC+AGG - chr4_4:59042856-59042875 None:intergenic 40.0%
! CCTGAAAGATGGGATGTTTT+AGG + chr4_4:59042853-59042872 Msa0691100:CDS 40.0%
TGAGGAGTTCCTGAAGAATT+TGG + chr4_4:59043478-59043497 Msa0691100:CDS 40.0%
GAGGAGTTCCTGAAGAATTT+GGG + chr4_4:59043479-59043498 Msa0691100:CDS 40.0%
TGGGATTAGAAAAGGGAACA+AGG + chr4_4:59043498-59043517 Msa0691100:CDS 40.0%
TTTATAGCTGCAACCATCCA+TGG - chr4_4:59043564-59043583 None:intergenic 40.0%
ATACTTTAGTTGCCTTGGCA+AGG + chr4_4:59043609-59043628 Msa0691100:CDS 40.0%
TCGAGATCCTGCTATAAATG+TGG + chr4_4:59043649-59043668 Msa0691100:CDS 40.0%
TCCTGCTATAAATGTGGCAA+TGG + chr4_4:59043655-59043674 Msa0691100:CDS 40.0%
TGTTATGGCTACTTACGTTG+GGG + chr4_4:59043754-59043773 Msa0691100:CDS 40.0%
!!! GTGAGAAGCATTCTTTTGGT+TGG + chr4_4:59043893-59043912 Msa0691100:intron 40.0%
GCTTAAACTAGAGAGGCAAT+GGG - chr4_4:59044196-59044215 None:intergenic 40.0%
TGCTTAAACTAGAGAGGCAA+TGG - chr4_4:59044197-59044216 None:intergenic 40.0%
GTGCATTGCTTAAACTAGAG+AGG - chr4_4:59044203-59044222 None:intergenic 40.0%
ATCGAGTTTATCCTCTACCT+CGG + chr4_4:59044488-59044507 Msa0691100:intron 40.0%
GTATTCCACAAGAATAACCG+AGG - chr4_4:59044508-59044527 None:intergenic 40.0%
AGTGAATCAACCAGAAGAGA+GGG - chr4_4:59044738-59044757 None:intergenic 40.0%
AAGTGAATCAACCAGAAGAG+AGG - chr4_4:59044739-59044758 None:intergenic 40.0%
CAAAAGCTTGTAAGGAAGCT+AGG + chr4_4:59045028-59045047 Msa0691100:CDS 40.0%
TGTAAGGAAGCTAGGAGTAA+CGG + chr4_4:59045036-59045055 Msa0691100:CDS 40.0%
AGCTTTCATCCTATTAAGCC+TGG + chr4_4:59045219-59045238 Msa0691100:intron 40.0%
! ACTGCCATATCCCCTAATTT+TGG + chr4_4:59045383-59045402 Msa0691100:intron 40.0%
AGTATCACACCACATTTACG+GGG - chr4_4:59045455-59045474 None:intergenic 40.0%
CGTGTGATGATAAGTATGGT+AGG + chr4_4:59045487-59045506 Msa0691100:intron 40.0%
! CAATTGCTTCATTTGAGACC+TGG + chr4_4:59045580-59045599 Msa0691100:intron 40.0%
!! TAGGTTTTGTGAAGGATGGA+AGG + chr4_4:59045617-59045636 Msa0691100:intron 40.0%
!! AGGTTTTGTGAAGGATGGAA+GGG + chr4_4:59045618-59045637 Msa0691100:intron 40.0%
TGGTTCCGACAAGTTTGATT+AGG - chr4_4:59045668-59045687 None:intergenic 40.0%
CCTACAATTTCCCTGTTGAA+TGG - chr4_4:59045974-59045993 None:intergenic 40.0%
CCATTCAACAGGGAAATTGT+AGG + chr4_4:59045971-59045990 Msa0691100:intron 40.0%
! TGGCTATGGCAATGATGGAA+TGG - chr4_4:59042401-59042420 None:intergenic 45.0%
ATTGGTTGTGGCTATGGCTA+TGG - chr4_4:59042415-59042434 None:intergenic 45.0%
TAAGAGAAAATGGGCAGTGC+GGG - chr4_4:59042605-59042624 None:intergenic 45.0%
TATAAACGCAGACGCGTGTA+CGG + chr4_4:59042631-59042650 Msa0691100:CDS 45.0%
TTTGAAGACACCACGCTGAA+TGG - chr4_4:59042665-59042684 None:intergenic 45.0%
! TCCTTTTCAACCTTTGGTGG+AGG + chr4_4:59042691-59042710 Msa0691100:CDS 45.0%
ACCTCCACCAAAGGTTGAAA+AGG - chr4_4:59042695-59042714 None:intergenic 45.0%
AAATTCAGCACCTCCACCAA+AGG - chr4_4:59042704-59042723 None:intergenic 45.0%
! TGGTGATGAAGATGAAGTGG+AGG + chr4_4:59042789-59042808 Msa0691100:CDS 45.0%
!!! AGATGGGATGTTTTAGGGCT+TGG + chr4_4:59042859-59042878 Msa0691100:CDS 45.0%
! TTTAGGGCTTGGACAAGCTA+TGG + chr4_4:59042870-59042889 Msa0691100:CDS 45.0%
! AGGTAGAGTTTTGCAAGCCA+TGG + chr4_4:59043544-59043563 Msa0691100:CDS 45.0%
! AGAGTTTTGCAAGCCATGGA+TGG + chr4_4:59043548-59043567 Msa0691100:CDS 45.0%
GCCATTGCCACATTTATAGC+AGG - chr4_4:59043659-59043678 None:intergenic 45.0%
GCTATAAATGTGGCAATGGC+TGG + chr4_4:59043659-59043678 Msa0691100:CDS 45.0%
ATCTATTGGGTGGCTTCTAC+AGG + chr4_4:59043696-59043715 Msa0691100:CDS 45.0%
AGAGAACAGTGCAGTTACGA+GGG - chr4_4:59043726-59043745 None:intergenic 45.0%
CTCAAAGTGCAACATGGAAG+TGG - chr4_4:59044107-59044126 None:intergenic 45.0%
TGCGTGTAGCATACCATTGA+TGG - chr4_4:59044405-59044424 None:intergenic 45.0%
GGATAAACTCGATGCTCATC+AGG - chr4_4:59044481-59044500 None:intergenic 45.0%
CACAAGAATAACCGAGGTAG+AGG - chr4_4:59044502-59044521 None:intergenic 45.0%
CTCTACCTCGGTTATTCTTG+TGG + chr4_4:59044500-59044519 Msa0691100:intron 45.0%
! TATTTCTGTACTCTGGTCCC+AGG + chr4_4:59044891-59044910 Msa0691100:intron 45.0%
ATTTCTGTACTCTGGTCCCA+GGG + chr4_4:59044892-59044911 Msa0691100:intron 45.0%
TGTCAACTTCGACACTTCCT+TGG + chr4_4:59044927-59044946 Msa0691100:CDS 45.0%
CTTAGAAACTGCACTTGCCA+AGG - chr4_4:59044947-59044966 None:intergenic 45.0%
AGAACAAGGCCAGGCTTAAT+AGG - chr4_4:59045231-59045250 None:intergenic 45.0%
TCTAAGAGACCCCGTAAATG+TGG + chr4_4:59045443-59045462 Msa0691100:intron 45.0%
!! GGTTTTGTGAAGGATGGAAG+GGG + chr4_4:59045619-59045638 Msa0691100:intron 45.0%
CACGAGACAACCGTAAGATT+AGG - chr4_4:59045859-59045878 None:intergenic 45.0%
!! CATCGGTAACGGATACTAGA+GGG - chr4_4:59046105-59046124 None:intergenic 45.0%
TTACGCCTATGTAAGAGCCT+CGG - chr4_4:59046132-59046151 None:intergenic 45.0%
GGCTCTTACATAGGCGTAAA+AGG + chr4_4:59046133-59046152 Msa0691100:CDS 45.0%
!!! TGGTGTTTTAAGAGGCGTGT+CGG + chr4_4:59046240-59046259 Msa0691100:CDS 45.0%
TCCGTTGTTAGGTCCGATAT+CGG + chr4_4:59046388-59046407 Msa0691100:CDS 45.0%
ACCGATATCGGACCTAACAA+CGG - chr4_4:59046392-59046411 None:intergenic 45.0%
CACAACCCACTTCAATGACA+TGG - chr4_4:59046677-59046696 None:intergenic 45.0%
!!! TTACATTTATTTTAAATTTT+AGG + chr4_4:59043938-59043957 Msa0691100:intron 5.0%
!!! TACATTTATTTTAAATTTTA+GGG + chr4_4:59043939-59043958 Msa0691100:intron 5.0%
GGCTATGGCTATGGCAATGA+TGG - chr4_4:59042406-59042425 None:intergenic 50.0%
AAATGGGCAGTGCGGGAATT+TGG - chr4_4:59042598-59042617 None:intergenic 50.0%
GGTTCATCTTCCATTCAGCG+TGG + chr4_4:59042652-59042671 Msa0691100:CDS 50.0%
CAACAGATTAGGACTAGGGC+TGG + chr4_4:59042769-59042788 Msa0691100:CDS 50.0%
! GGCTGGTGATGAAGATGAAG+TGG + chr4_4:59042786-59042805 Msa0691100:CDS 50.0%
! CTTCTCTGGCACAGTTGATG+AGG + chr4_4:59043460-59043479 Msa0691100:CDS 50.0%
TGGTTGCAGCTATAAAGCCG+CGG + chr4_4:59043568-59043587 Msa0691100:CDS 50.0%
TTAGTTGCCTTGGCAAGGCT+TGG + chr4_4:59043614-59043633 Msa0691100:CDS 50.0%
AGTGTGGCGAGCGATCTATT+GGG + chr4_4:59043683-59043702 Msa0691100:CDS 50.0%
CAGAGAACAGTGCAGTTACG+AGG - chr4_4:59043727-59043746 None:intergenic 50.0%
CCAGTTGTCGCATCCTTGAT+AGG - chr4_4:59044003-59044022 None:intergenic 50.0%
CCTATCAAGGATGCGACAAC+TGG + chr4_4:59044000-59044019 Msa0691100:CDS 50.0%
AGCATTGTGCGTTGAGCATC+TGG - chr4_4:59044048-59044067 None:intergenic 50.0%
ACGCACAATGCTTGCATACC+AGG + chr4_4:59044056-59044075 Msa0691100:CDS 50.0%
AGCTAGGAGTAACGGTGCTT+TGG + chr4_4:59045044-59045063 Msa0691100:CDS 50.0%
TTGTGAAGGATGGAAGGGGA+AGG + chr4_4:59045623-59045642 Msa0691100:intron 50.0%
AAGGATGGAAGGGGAAGGAA+AGG + chr4_4:59045628-59045647 Msa0691100:intron 50.0%
AATCTTCGCGAACGCTGATG+AGG + chr4_4:59046009-59046028 Msa0691100:CDS 50.0%
!! CCATCGGTAACGGATACTAG+AGG - chr4_4:59046106-59046125 None:intergenic 50.0%
CCTCTAGTATCCGTTACCGA+TGG + chr4_4:59046103-59046122 Msa0691100:CDS 50.0%
TCTACCGGAACACATGGAGA+AGG - chr4_4:59046178-59046197 None:intergenic 50.0%
CAAGTGTCTACCGGAACACA+TGG - chr4_4:59046184-59046203 None:intergenic 50.0%
TGTGTTCCGGTAGACACTTG+TGG + chr4_4:59046184-59046203 Msa0691100:CDS 50.0%
! GCTGGTGATGCATATGCATC+TGG + chr4_4:59046208-59046227 Msa0691100:CDS 50.0%
TTGTTGCACAGCAGGGAACA+AGG + chr4_4:59046308-59046327 Msa0691100:CDS 50.0%
AGAAAGAGATCCACCAGCCG+CGG - chr4_4:59043588-59043607 None:intergenic 55.0%
CAGTGTGGCGAGCGATCTAT+TGG + chr4_4:59043682-59043701 Msa0691100:CDS 55.0%
TTCTCACTCGCCCTCTCTTC+TGG + chr4_4:59044725-59044744 Msa0691100:intron 55.0%
GACAGTTGACGATGTGCCCT+GGG - chr4_4:59044911-59044930 None:intergenic 55.0%
TGACAGTTGACGATGTGCCC+TGG - chr4_4:59044912-59044931 None:intergenic 55.0%
GTAAGAGCCTCGGAGACCAT+CGG - chr4_4:59046122-59046141 None:intergenic 55.0%
GGTCTCCGAGGCTCTTACAT+AGG + chr4_4:59046124-59046143 Msa0691100:CDS 55.0%
CCGGAACACATGGAGAAGGA+GGG - chr4_4:59046174-59046193 None:intergenic 55.0%
CCCTCCTTCTCCATGTGTTC+CGG + chr4_4:59046171-59046190 Msa0691100:CDS 55.0%
ACCGGAACACATGGAGAAGG+AGG - chr4_4:59046175-59046194 None:intergenic 55.0%
CCAGCACCACAAGTGTCTAC+CGG - chr4_4:59046193-59046212 None:intergenic 55.0%
AGCCACTGTTGTTGCACAGC+AGG + chr4_4:59046300-59046319 Msa0691100:CDS 55.0%
GCCACTGTTGTTGCACAGCA+GGG + chr4_4:59046301-59046320 Msa0691100:CDS 55.0%
TCCCTGCTGTGCAACAACAG+TGG - chr4_4:59046305-59046324 None:intergenic 55.0%
TGCAGCTATAAAGCCGCGGC+TGG + chr4_4:59043572-59043591 Msa0691100:CDS 60.0%
AGCTATAAAGCCGCGGCTGG+TGG + chr4_4:59043575-59043594 Msa0691100:CDS 60.0%
GTTGCCTTGGCAAGGCTTGG+AGG + chr4_4:59043617-59043636 Msa0691100:CDS 60.0%
TGTGGCAATGGCTGGCAGTG+TGG + chr4_4:59043667-59043686 Msa0691100:CDS 60.0%
GTGGCGAGCGATCTATTGGG+TGG + chr4_4:59043686-59043705 Msa0691100:CDS 60.0%
TCCGTTACCGATGGTCTCCG+AGG + chr4_4:59046112-59046131 Msa0691100:CDS 60.0%
GCCTCGGAGACCATCGGTAA+CGG - chr4_4:59046116-59046135 None:intergenic 60.0%
CCGGTAGACACTTGTGGTGC+TGG + chr4_4:59046190-59046209 Msa0691100:CDS 60.0%
GCGACCTCCAAGCCTTGCCA+AGG - chr4_4:59043624-59043643 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 59042260 59046697 59042260 ID=Msa0691100;Name=Msa0691100
chr4_4 mRNA 59042260 59046697 59042260 ID=Msa0691100-mRNA-1;Parent=Msa0691100;Name=Msa0691100-mRNA-1;_AED=0.11;_eAED=0.11;_QI=266|0.75|0.8|1|1|1|5|277|507
chr4_4 exon 59042260 59042891 59042260 ID=Msa0691100-mRNA-1:exon:15963;Parent=Msa0691100-mRNA-1
chr4_4 exon 59043455 59043846 59043455 ID=Msa0691100-mRNA-1:exon:15964;Parent=Msa0691100-mRNA-1
chr4_4 exon 59043960 59044077 59043960 ID=Msa0691100-mRNA-1:exon:15965;Parent=Msa0691100-mRNA-1
chr4_4 exon 59044913 59045121 59044913 ID=Msa0691100-mRNA-1:exon:15966;Parent=Msa0691100-mRNA-1
chr4_4 exon 59045982 59046697 59045982 ID=Msa0691100-mRNA-1:exon:15967;Parent=Msa0691100-mRNA-1
chr4_4 five_prime_UTR 59042260 59042525 59042260 ID=Msa0691100-mRNA-1:five_prime_utr;Parent=Msa0691100-mRNA-1
chr4_4 CDS 59042526 59042891 59042526 ID=Msa0691100-mRNA-1:cds;Parent=Msa0691100-mRNA-1
chr4_4 CDS 59043455 59043846 59043455 ID=Msa0691100-mRNA-1:cds;Parent=Msa0691100-mRNA-1
chr4_4 CDS 59043960 59044077 59043960 ID=Msa0691100-mRNA-1:cds;Parent=Msa0691100-mRNA-1
chr4_4 CDS 59044913 59045121 59044913 ID=Msa0691100-mRNA-1:cds;Parent=Msa0691100-mRNA-1
chr4_4 CDS 59045982 59046420 59045982 ID=Msa0691100-mRNA-1:cds;Parent=Msa0691100-mRNA-1
chr4_4 three_prime_UTR 59046421 59046697 59046421 ID=Msa0691100-mRNA-1:three_prime_utr;Parent=Msa0691100-mRNA-1
Gene Sequence

>Msa0691100

ATGTCTCTATCTTTTGTTCGTATCTCTTGTTCCTCTCATTCATTTCCACACTCTTTCCCATCTCAATTACCAAATTCCCGCACTGCCCATTTTCTCTTATGTTCTTATAAACGCAGACGCGTGTACGGTTCATCTTCCATTCAGCGTGGTGTCTTCAAAGTATGTTCCTTTTCAACCTTTGGTGGAGGTGCTGAATTTGAAAGTATGAGTCAAAGAAGCCATGATGAAGAAGAAGATGATGAGCAACAGATTAGGACTAGGGCTGGTGATGAAGATGAAGTGGAGGATGATGATGAAGAAGAAGGGTGTGTTAGTTCTTTTGTTTTTCCTGAAAGATGGGATGTTTTAGGGCTTGGACAAGCTATGGTAGACTTCTCTGGCACAGTTGATGAGGAGTTCCTGAAGAATTTGGGATTAGAAAAGGGAACAAGGAAACTTGTAAATCATGAGGAAAGAGGTAGAGTTTTGCAAGCCATGGATGGTTGCAGCTATAAAGCCGCGGCTGGTGGATCTCTTTCTAATACTTTAGTTGCCTTGGCAAGGCTTGGAGGTCGCTCTCTTCGAGATCCTGCTATAAATGTGGCAATGGCTGGCAGTGTGGCGAGCGATCTATTGGGTGGCTTCTACAGGTTTGCCCTCGTAACTGCACTGTTCTCTGATCAAATTGTTATGGCTACTTACGTTGGGGCTGTTTTAGTTTCATATAAGGAAGAAGCTAATTTGGAACTTGTCCTTCTCTCATTTCTATACAATTATGAGGAAAAATTACGCCGAGCAAATGTGCAATTTCTTTCTGCACCTATCAAGGATGCGACAACTGGAACTGTTATAGTTCTCACAACACCAGATGCTCAACGCACAATGCTTGCATACCAGGGCACATCGTCAACTGTCAACTTCGACACTTCCTTGGCAAGTGCAGTTTCTAAGACCAACATACTTGTTGTTGAAGGTTATTTATTTGAACTTCCTGATACTATTAAAGCAATAACAAAAGCTTGTAAGGAAGCTAGGAGTAACGGTGCTTTGGTTGCAGTAACAGCTTCAGATGTTACCTGCATTGAGAGACATTATGATCATTTCTGGGAAATTGTAGGCAATTATGCAGATTTAATCTTCGCGAACGCTGATGAGGCGAGAGCTCTATGTAATTTTGATGCAAAGGAAAGCACTGTTTCTGTTACAAGGTATCTAAGTCAGTTTGTCCCTCTAGTATCCGTTACCGATGGTCTCCGAGGCTCTTACATAGGCGTAAAAGGTGAAGCAGTATACATCCCTCCTTCTCCATGTGTTCCGGTAGACACTTGTGGTGCTGGTGATGCATATGCATCTGGCATATTGTATGGTGTTTTAAGAGGCGTGTCGGATTTAAGAAATATAGGTACAATAGCAGCTAAGGTTGCAGCCACTGTTGTTGCACAGCAGGGAACAAGGCTTAGAATTTCAGATGCAGTCAAATTGGCCGAATCTTTTGAATTTCAACTTGATACATCCGTTGTTAGGTCCGATATCGGTACTGTTTAA

Protein sequence

>Msa0691100

MSLSFVRISCSSHSFPHSFPSQLPNSRTAHFLLCSYKRRRVYGSSSIQRGVFKVCSFSTFGGGAEFESMSQRSHDEEEDDEQQIRTRAGDEDEVEDDDEEEGCVSSFVFPERWDVLGLGQAMVDFSGTVDEEFLKNLGLEKGTRKLVNHEERGRVLQAMDGCSYKAAAGGSLSNTLVALARLGGRSLRDPAINVAMAGSVASDLLGGFYRFALVTALFSDQIVMATYVGAVLVSYKEEANLELVLLSFLYNYEEKLRRANVQFLSAPIKDATTGTVIVLTTPDAQRTMLAYQGTSSTVNFDTSLASAVSKTNILVVEGYLFELPDTIKAITKACKEARSNGALVAVTASDVTCIERHYDHFWEIVGNYADLIFANADEARALCNFDAKESTVSVTRYLSQFVPLVSVTDGLRGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGVLRGVSDLRNIGTIAAKVAATVVAQQGTRLRISDAVKLAESFEFQLDTSVVRSDIGTV*