AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1279340


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1279340 MtrunA17_Chr8g0369581 96.721 427 14 0 3 429 116 542 0.0 854
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1279340 AT1G31410.1 60.514 428 164 3 2 425 80 506 0.0 541

Find 154 sgRNAs with CRISPR-Local

Find 484 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTCAACCTTTGAAGTTTC+TGG 0.100102 8_3:-16301773 None:intergenic
TCAATCCATTGCTAGGTTTC+TGG 0.136153 8_3:-16301618 None:intergenic
ATTGATGTCATTTGCATTAT+AGG 0.141911 8_3:-16300644 None:intergenic
GTCGGATTGGTGGGCGCGTC+AGG 0.170941 8_3:+16301323 Msa1279340:CDS
CAAAGTCTGGAGCGAGTTTA+TGG 0.184370 8_3:+16301005 Msa1279340:CDS
TGGGATCACCTCCTGCTTAA+AGG 0.201166 8_3:-16301407 None:intergenic
TCTATCCACTGATGAATTAA+TGG 0.202978 8_3:-16301355 None:intergenic
GAAAACTATCTAAAGGCTTT+TGG 0.225647 8_3:+16300896 Msa1279340:CDS
AGGGAATAGAATGAAATTTA+AGG 0.239027 8_3:+16299392 Msa1279340:CDS
CGGTGCAGTCTTAAAGTATA+TGG 0.253803 8_3:+16300615 Msa1279340:CDS
GACATCAATTTGGAAGTTAA+TGG 0.260599 8_3:+16300658 Msa1279340:CDS
CGAGTTTATGGGCAGATCTT+TGG 0.265032 8_3:+16301017 Msa1279340:CDS
ACCATGCATCCCCATCGATA+TGG 0.267179 8_3:-16300383 None:intergenic
ATATTACCAGTTTAGTTATC+TGG 0.272665 8_3:+16298858 Msa1279340:intron
TAATGCAAATGACATCAATT+TGG 0.293235 8_3:+16300648 Msa1279340:CDS
CTGTGGCGGCCTGATCTTGC+AGG 0.299748 8_3:+16300556 Msa1279340:CDS
TCATCATTGGTTACATAGTC+TGG 0.304040 8_3:+16301664 Msa1279340:exon
AGGTAGAATTTCAAGATTAT+TGG 0.305070 8_3:+16301814 Msa1279340:three_prime_UTR
TTTAGCATTGCTTGCAAAAC+AGG 0.312900 8_3:+16300705 Msa1279340:CDS
TGGACCCTGAAGGTGATATA+TGG 0.315698 8_3:+16300354 Msa1279340:CDS
GAGTTTATGGGCAGATCTTT+GGG 0.328465 8_3:+16301018 Msa1279340:CDS
CTATCCACTGATGAATTAAT+GGG 0.330093 8_3:-16301354 None:intergenic
GCAGTTATTGTTCCAAAGTC+TGG 0.335296 8_3:+16300992 Msa1279340:CDS
AGAAAACAGCATACCTCTAT+TGG 0.343155 8_3:-16300449 None:intergenic
TGACTTGCGTAATGAGCTAT+TGG 0.344590 8_3:+16301704 Msa1279340:three_prime_UTR
GGTAGAATTTCAAGATTATT+GGG 0.347489 8_3:+16301815 Msa1279340:three_prime_UTR
GTGGCTCTATTCCTCCTTCA+TGG 0.359002 8_3:+16299110 Msa1279340:CDS
GCAGCCCATATATCACCTTC+AGG 0.363541 8_3:-16300359 None:intergenic
AATTTGATTTATGTATTAGT+AGG 0.363769 8_3:+16301946 Msa1279340:three_prime_UTR
CTTGTTCTTGATCCTCGCCT+TGG 0.364173 8_3:+16302131 Msa1279340:three_prime_UTR
TATTCAAAAGCCATGTTGAT+TGG 0.374771 8_3:-16302090 None:intergenic
GATACTGCGGAATTAGATAA+TGG 0.394592 8_3:-16301568 None:intergenic
CCATGCATCCCCATCGATAT+GGG 0.394866 8_3:-16300382 None:intergenic
TCATTCCACCAATGTGCCTT+TGG 0.399900 8_3:+16301456 Msa1279340:CDS
CATAAACTCGCTCCAGACTT+TGG 0.404668 8_3:-16301004 None:intergenic
TTGTTCTTGATCCTCGCCTT+GGG 0.406913 8_3:+16302132 Msa1279340:three_prime_UTR
CTAGACACCAATCTCATTGA+TGG 0.408522 8_3:+16301502 Msa1279340:CDS
TTAGACATCCGTTTAGCAAC+AGG 0.408652 8_3:-16300965 None:intergenic
GGGATCACCTCCTGCTTAAA+GGG 0.409072 8_3:-16301406 None:intergenic
TCGGATTGGTGGGCGCGTCA+GGG 0.412067 8_3:+16301324 Msa1279340:CDS
CTGCTTAAAGGGCAGTGCTC+TGG 0.423382 8_3:-16301395 None:intergenic
TGTTGGGACATGATCACCTT+TGG 0.426487 8_3:-16299469 None:intergenic
AAAGTCTGGAGCGAGTTTAT+GGG 0.428771 8_3:+16301006 Msa1279340:CDS
ATTAGACAAGCTCTTAAAGC+TGG 0.433748 8_3:+16302045 Msa1279340:three_prime_UTR
ATCTACATCTATATTTCCAT+TGG 0.440095 8_3:-16299008 None:intergenic
ACATGATCACCTTTGGTAAA+GGG 0.443034 8_3:-16299462 None:intergenic
ATATTATTCCTGTTGCTAAA+CGG 0.443764 8_3:+16300957 Msa1279340:CDS
GAAATCCTCCCTGCAAGATC+AGG 0.444281 8_3:-16300565 None:intergenic
GCAGCTGATATTGTCGGTAT+TGG 0.446952 8_3:+16299501 Msa1279340:CDS
CATATATTCATGTCTCCTCT+AGG 0.458023 8_3:+16301986 Msa1279340:three_prime_UTR
GCATAAGTTGGCTCCAATAG+AGG 0.460660 8_3:+16300436 Msa1279340:CDS
TGTGCCTTTGGAGTTAACTA+AGG 0.461795 8_3:+16301468 Msa1279340:CDS
GACATGATCACCTTTGGTAA+AGG 0.465618 8_3:-16299463 None:intergenic
GGTGCAGTCTTAAAGTATAT+GGG 0.469482 8_3:+16300616 Msa1279340:CDS
TGATAGTGAAAACTATCTAA+AGG 0.472463 8_3:+16300889 Msa1279340:CDS
TCATGTCCCAACAACTGCTT+TGG 0.472626 8_3:+16299479 Msa1279340:CDS
GTTTGAATCCTTGAGGCAGC+AGG 0.474153 8_3:-16301298 None:intergenic
TCAGCTGCCAAAGCAGTTGT+TGG 0.479681 8_3:-16299486 None:intergenic
ATATATTCATGTCTCCTCTA+GGG 0.480876 8_3:+16301987 Msa1279340:three_prime_UTR
TGGAAATATAGATGTAGATA+AGG 0.481125 8_3:+16299012 Msa1279340:CDS
TTGTGTATCAATCCATTGCT+AGG 0.482205 8_3:-16301625 None:intergenic
TTTAAGCAGGAGGTGATCCC+AGG 0.484405 8_3:+16301409 Msa1279340:CDS
CAGAGCACTGCCCTTTAAGC+AGG 0.486109 8_3:+16301396 Msa1279340:CDS
ATGTGTGGGTAGCTGTTGGA+TGG 0.494936 8_3:+16300927 Msa1279340:CDS
ATTGCTAGGTTTCTGGATTG+AGG 0.495764 8_3:-16301611 None:intergenic
CACTGATGAATTAATGGGGA+TGG 0.509737 8_3:-16301349 None:intergenic
ATCACCTTTGGTAAAGGGAA+TGG 0.510991 8_3:-16299457 None:intergenic
TAGGATTTCATAAATTCTCA+AGG 0.513835 8_3:+16299372 Msa1279340:intron
TATTCCTCCTTCATGGATCA+AGG 0.514596 8_3:+16299117 Msa1279340:CDS
GACTTGCGTAATGAGCTATT+GGG 0.515901 8_3:+16301705 Msa1279340:three_prime_UTR
CGGATTGGTGGGCGCGTCAG+GGG 0.520025 8_3:+16301325 Msa1279340:CDS
TTGAAAGTTGTTGCTTTGCG+TGG 0.525167 8_3:+16299091 Msa1279340:CDS
GCGTCAGTATATCTCATCAT+TGG 0.526148 8_3:+16301651 Msa1279340:CDS
CAGCTGCCAAAGCAGTTGTT+GGG 0.528619 8_3:-16299485 None:intergenic
ATCAATTTGGAAGTTAATGG+TGG 0.530397 8_3:+16300661 Msa1279340:CDS
CGCAAAGCAACAACTTTCAA+AGG 0.531403 8_3:-16299088 None:intergenic
CACCTTTCTAAAATGTCAGA+TGG 0.537720 8_3:-16301532 None:intergenic
ATGAGATTGGTGTCTAGCCT+TGG 0.538923 8_3:-16301496 None:intergenic
CCGCAGTATCAGATTACCAC+TGG 0.544000 8_3:+16301581 Msa1279340:CDS
GCTTTGGCAGCTGATATTGT+CGG 0.545232 8_3:+16299495 Msa1279340:CDS
TTCAAACAAGTCGGATTGGT+GGG 0.547559 8_3:+16301314 Msa1279340:CDS
GGAGATGTGTGGGTAGCTGT+TGG 0.549440 8_3:+16300923 Msa1279340:CDS
ATGGGCTGCCCCATATCGAT+GGG 0.550794 8_3:+16300373 Msa1279340:CDS
TATGGGCTGCCCCATATCGA+TGG 0.551250 8_3:+16300372 Msa1279340:CDS
TCTTGCAGGGAGGATTTCCA+TGG 0.551513 8_3:+16300570 Msa1279340:CDS
AGGATTCAAACAAGTCGGAT+TGG 0.559710 8_3:+16301310 Msa1279340:CDS
AGGCAATTCCTGCTGCCTCA+AGG 0.563051 8_3:+16301290 Msa1279340:intron
TGAAGGTTCAACAATATGGA+AGG 0.563076 8_3:-16301898 None:intergenic
AAGATGTGGAAGGTCAAGAA+TGG 0.565634 8_3:+16299574 Msa1279340:CDS
CTATCCATTCCCTTTACCAA+AGG 0.566354 8_3:+16299453 Msa1279340:CDS
TTAGACAAGCTCTTAAAGCT+GGG 0.568402 8_3:+16302046 Msa1279340:three_prime_UTR
CAGCCCATATATCACCTTCA+GGG 0.568592 8_3:-16300358 None:intergenic
CCCATATCGATGGGGATGCA+TGG 0.568675 8_3:+16300382 Msa1279340:CDS
CATCATTGGTTACATAGTCT+GGG 0.568873 8_3:+16301665 Msa1279340:exon
ACAAGGGCAAAGGTCAAAGA+TGG 0.568979 8_3:-16302113 None:intergenic
GACTCTCCTAGAGAAGTTGT+CGG 0.569787 8_3:+16300595 Msa1279340:CDS
TGGAATGACCTTGAAGAAGA+GGG 0.570317 8_3:-16301441 None:intergenic
TGAATGACCAGAAACTTCAA+AGG 0.570829 8_3:+16301766 Msa1279340:three_prime_UTR
CAAGGCGAGGATCAAGAACA+AGG 0.572304 8_3:-16302130 None:intergenic
GGACCCTGAAGGTGATATAT+GGG 0.573737 8_3:+16300355 Msa1279340:CDS
GTGGAATGACCTTGAAGAAG+AGG 0.574254 8_3:-16301442 None:intergenic
ATTCAAACAAGTCGGATTGG+TGG 0.574340 8_3:+16301313 Msa1279340:CDS
ACTGCACCGACAACTTCTCT+AGG 0.578146 8_3:-16300601 None:intergenic
TAACTCCAAAGGCACATTGG+TGG 0.578428 8_3:-16301461 None:intergenic
CAGGAACTGTGAGGGAGAAG+TGG 0.579592 8_3:+16300334 Msa1279340:CDS
ACCTAGCAATGGAGTTCCCA+AGG 0.582317 8_3:-16302148 None:intergenic
GTGCCTTTGGAGTTAACTAA+GGG 0.583489 8_3:+16301469 Msa1279340:CDS
AGGATTTCATAAATTCTCAA+GGG 0.584271 8_3:+16299373 Msa1279340:intron
CCAGTGGTAATCTGATACTG+CGG 0.585201 8_3:-16301581 None:intergenic
AATTGAGCCAATAAAAGATG+TGG 0.585559 8_3:+16299560 Msa1279340:CDS
TGTGGCGGCCTGATCTTGCA+GGG 0.587317 8_3:+16300557 Msa1279340:CDS
GTGCAGTCTTAAAGTATATG+GGG 0.588658 8_3:+16300617 Msa1279340:CDS
AGTTAACTCCAAAGGCACAT+TGG 0.592816 8_3:-16301464 None:intergenic
TCACAGACCTTGATCCATGA+AGG 0.599320 8_3:-16299124 None:intergenic
TGGTGCTCCATCAATGAGAT+TGG 0.600252 8_3:-16301509 None:intergenic
TGCAGGACTGGGCAGATCTG+TGG 0.605392 8_3:+16300539 Msa1279340:intron
CCGACTTGTTTGAATCCTTG+AGG 0.606798 8_3:-16301305 None:intergenic
TCAATTTGGAAGTTAATGGT+GGG 0.608280 8_3:+16300662 Msa1279340:CDS
GCAAGGAAACATGATGCCAA+TGG 0.610993 8_3:+16298992 Msa1279340:CDS
CAACAATAAGTCGTTAACGC+TGG 0.611114 8_3:+16301848 Msa1279340:three_prime_UTR
TGCAGGGAGGATTTCCATGG+TGG 0.612678 8_3:+16300573 Msa1279340:CDS
AAACTTATCTGAGAAATGGA+AGG 0.613426 8_3:+16299602 Msa1279340:CDS
CTTTGGAGTTAACTAAGGGT+AGG 0.618456 8_3:+16301473 Msa1279340:CDS
CCTCAAGGATTCAAACAAGT+CGG 0.623607 8_3:+16301305 Msa1279340:CDS
TATATTCATGTCTCCTCTAG+GGG 0.626597 8_3:+16301988 Msa1279340:three_prime_UTR
TCAATCCAGAAACCTAGCAA+TGG 0.628283 8_3:+16301613 Msa1279340:CDS
GAATGACCTTGAAGAAGAGG+GGG 0.632733 8_3:-16301439 None:intergenic
AGGATCAAGAACAAGGGCAA+AGG 0.635562 8_3:-16302123 None:intergenic
AGCACTGCCCTTTAAGCAGG+AGG 0.635862 8_3:+16301399 Msa1279340:CDS
CTACCCTTAGTTAACTCCAA+AGG 0.636983 8_3:-16301472 None:intergenic
CATCCCCATTAATTCATCAG+TGG 0.638336 8_3:+16301350 Msa1279340:CDS
CATGCATCCCCATCGATATG+GGG 0.638964 8_3:-16300381 None:intergenic
GAGCCAATAAAAGATGTGGA+AGG 0.640097 8_3:+16299564 Msa1279340:CDS
GGAATGACCTTGAAGAAGAG+GGG 0.641426 8_3:-16301440 None:intergenic
AGGACTGGGCAGATCTGTGG+CGG 0.649107 8_3:+16300542 Msa1279340:intron
GGGCTGTCGAATACATACAA+AGG 0.650705 8_3:+16301725 Msa1279340:three_prime_UTR
GCAATGGAGTTCCCAAGGCG+AGG 0.651050 8_3:-16302143 None:intergenic
TTGTCGGTATTGGTGACTCG+TGG 0.657424 8_3:+16299511 Msa1279340:CDS
TGCAGTCTTAAAGTATATGG+GGG 0.667598 8_3:+16300618 Msa1279340:CDS
CAGACCTTGATCCATGAAGG+AGG 0.671390 8_3:-16299121 None:intergenic
CTTTCTAAAATGTCAGATGG+TGG 0.673284 8_3:-16301529 None:intergenic
TTCTCTAGGAGAGTCCACCA+TGG 0.675176 8_3:-16300587 None:intergenic
AAGGCGAGGATCAAGAACAA+GGG 0.676463 8_3:-16302129 None:intergenic
ATATCTACGCAGGAACTGTG+AGG 0.679822 8_3:+16300325 Msa1279340:CDS
TATCTACGCAGGAACTGTGA+GGG 0.680170 8_3:+16300326 Msa1279340:CDS
AGTTAACTAAGGGTAGGCCA+AGG 0.683491 8_3:+16301479 Msa1279340:CDS
GAGGGAGAAGTGGACCCTGA+AGG 0.685656 8_3:+16300344 Msa1279340:CDS
TATCCACTGATGAATTAATG+GGG 0.690352 8_3:-16301353 None:intergenic
GGCGGCCTGATCTTGCAGGG+AGG 0.691431 8_3:+16300560 Msa1279340:CDS
GGATTGAGGCAAGCAACCAG+TGG 0.697293 8_3:-16301597 None:intergenic
TTGCAGATGATAATGATGCA+AGG 0.698646 8_3:+16298975 Msa1279340:intron
ACAAACAATAAATCCCCTAG+AGG 0.710664 8_3:-16302001 None:intergenic
CATTGGTTACATAGTCTGGG+CGG 0.724869 8_3:+16301668 Msa1279340:exon
TGGGCTGCCCCATATCGATG+GGG 0.726315 8_3:+16300374 Msa1279340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAAAATGATTTTTAACA+AGG + chr8_3:16295925-16295944 Msa1279340:intron 10.0%
!!! TTTAAAATGATTTTTAACAA+GGG + chr8_3:16295926-16295945 Msa1279340:intron 10.0%
!!! AATTTATTATTTTTTGCTAT+TGG - chr8_3:16300103-16300122 None:intergenic 10.0%
!!! TATTTAAAATTTGGAAAAAT+AGG - chr8_3:16300830-16300849 None:intergenic 10.0%
!!! GTAACTTAATATTTAAAATT+TGG - chr8_3:16300839-16300858 None:intergenic 10.0%
!!! TAATACATAAATCAAATTTT+CGG - chr8_3:16301944-16301963 None:intergenic 10.0%
!!! AATGATTTTTGGAATTTTTT+TGG + chr8_3:16295545-16295564 Msa1279340:intron 15.0%
!!! ACAATTTTTAGAATTTAAAC+AGG + chr8_3:16295991-16296010 Msa1279340:intron 15.0%
!!! CAATTTTTAGAATTTAAACA+GGG + chr8_3:16295992-16296011 Msa1279340:intron 15.0%
!!! AAATTTGTGTTCATTTTTAA+TGG + chr8_3:16298823-16298842 Msa1279340:intron 15.0%
!!! TTTTTTTACGAAAAACAAAT+AGG + chr8_3:16299775-16299794 Msa1279340:intron 15.0%
!! ATTAATTATAACATATCCAT+TGG + chr8_3:16300232-16300251 Msa1279340:intron 15.0%
!!! AATTTGATTTATGTATTAGT+AGG + chr8_3:16301946-16301965 Msa1279340:three_prime_UTR 15.0%
!!! ATTGTTTGAGTCTTTTAAAT+TGG - chr8_3:16296134-16296153 None:intergenic 20.0%
!!! AGAATTGAACAAGTATTTTT+AGG + chr8_3:16296297-16296316 Msa1279340:intron 20.0%
!!! TATTTTTAGGTCCAAAATTA+GGG + chr8_3:16296310-16296329 Msa1279340:intron 20.0%
!!! ATCAATGTCAATTTACTTTT+GGG - chr8_3:16297241-16297260 None:intergenic 20.0%
!!! AATCAATGTCAATTTACTTT+TGG - chr8_3:16297242-16297261 None:intergenic 20.0%
!! ATTAACATTGATATTGACAT+TGG + chr8_3:16297944-16297963 Msa1279340:intron 20.0%
!! TTAACATTGATATTGACATT+GGG + chr8_3:16297945-16297964 Msa1279340:intron 20.0%
!!! CTCAATTATAGCTTTTTTAA+CGG - chr8_3:16299547-16299566 None:intergenic 20.0%
!! TTAAAAACTTATCTGAGAAA+TGG + chr8_3:16299598-16299617 Msa1279340:CDS 20.0%
!! GGATATGTTATAATTAATCT+TGG - chr8_3:16300230-16300249 None:intergenic 20.0%
!!! TACTACTTTTATGTATTTCT+AGG + chr8_3:16300856-16300875 Msa1279340:intron 20.0%
!!! ATTGTTGATAATTACTCAAA+TGG + chr8_3:16301151-16301170 Msa1279340:intron 20.0%
!!! TTGTTGATAATTACTCAAAT+GGG + chr8_3:16301152-16301171 Msa1279340:intron 20.0%
!! AAAAAAAAAGAGGTTGAAAA+AGG - chr8_3:16301247-16301266 None:intergenic 20.0%
!! CAAAAAAGCAAAAAAAAAAG+AGG - chr8_3:16301257-16301276 None:intergenic 20.0%
!!! TTTTTTGTTTTGTTTTCTCT+AGG + chr8_3:16301270-16301289 Msa1279340:intron 20.0%
! GACTCTAACAAACTAAAAAA+AGG + chr8_3:16295715-16295734 Msa1279340:intron 25.0%
!! TTTTGACATGAGATTAAAAC+AGG + chr8_3:16296096-16296115 Msa1279340:intron 25.0%
! TTTGACATGAGATTAAAACA+GGG + chr8_3:16296097-16296116 Msa1279340:intron 25.0%
!! AAAGACTCAAACAATTTTCA+AGG + chr8_3:16296139-16296158 Msa1279340:intron 25.0%
! TTTGCAAAATTCACATAGAA+GGG - chr8_3:16296201-16296220 None:intergenic 25.0%
! ATTTGCAAAATTCACATAGA+AGG - chr8_3:16296202-16296221 None:intergenic 25.0%
!!! GTATTTTTAGGTCCAAAATT+AGG + chr8_3:16296309-16296328 Msa1279340:intron 25.0%
! TTCATAAATGAAATGTTGCA+TGG - chr8_3:16296485-16296504 None:intergenic 25.0%
! TTCATAAATGAAATGTTGCA+TGG - chr8_3:16296485-16296504 None:intergenic 25.0%
!!! CTATCTTTTGTTTGTATTTC+CGG - chr8_3:16297020-16297039 None:intergenic 25.0%
!! TGCATATATGTCTATGTTTT+CGG - chr8_3:16297079-16297098 None:intergenic 25.0%
! TTCAATTTGTATCTTGTTAC+TGG - chr8_3:16297139-16297158 None:intergenic 25.0%
! TTTAACAAGATACCAATTGA+GGG + chr8_3:16297166-16297185 Msa1279340:intron 25.0%
! ATTAACATTGACATTGACAT+TGG + chr8_3:16297423-16297442 Msa1279340:intron 25.0%
! ATTAACATTGACATTGACAT+TGG + chr8_3:16297423-16297442 Msa1279340:intron 25.0%
! ATTAACATTGACATTGACAT+TGG + chr8_3:16297423-16297442 Msa1279340:intron 25.0%
! GTATGATATAGCAAGATTAT+TGG + chr8_3:16298016-16298035 Msa1279340:intron 25.0%
!! TAATACCAGTTTTTACTTGT+CGG + chr8_3:16298745-16298764 Msa1279340:intron 25.0%
! ATATTACCAGTTTAGTTATC+TGG + chr8_3:16298858-16298877 Msa1279340:intron 25.0%
! TAAAACCACAAATCACAAAT+TGG - chr8_3:16298941-16298960 None:intergenic 25.0%
! ATCTACATCTATATTTCCAT+TGG - chr8_3:16299011-16299030 None:intergenic 25.0%
! TGGAAATATAGATGTAGATA+AGG + chr8_3:16299012-16299031 Msa1279340:CDS 25.0%
!! GTGAAATTTTCTTCAATTGT+AGG + chr8_3:16299353-16299372 Msa1279340:intron 25.0%
! TAGGATTTCATAAATTCTCA+AGG + chr8_3:16299372-16299391 Msa1279340:intron 25.0%
! AGGATTTCATAAATTCTCAA+GGG + chr8_3:16299373-16299392 Msa1279340:intron 25.0%
! AGGGAATAGAATGAAATTTA+AGG + chr8_3:16299392-16299411 Msa1279340:CDS 25.0%
!! TGTTTTATATTTCTTCTCCT+TGG + chr8_3:16299639-16299658 Msa1279340:intron 25.0%
! CAAAATTACAGTATCTAACA+TGG - chr8_3:16299848-16299867 None:intergenic 25.0%
!!! TAGTTTTCAAAAGCATAAGT+TGG + chr8_3:16300424-16300443 Msa1279340:CDS 25.0%
! TTAGAGTAGATTATTTACAC+TGG + chr8_3:16300513-16300532 Msa1279340:intron 25.0%
!! ATTGATGTCATTTGCATTAT+AGG - chr8_3:16300647-16300666 None:intergenic 25.0%
! TAATGCAAATGACATCAATT+TGG + chr8_3:16300648-16300667 Msa1279340:CDS 25.0%
!! TGATAGTGAAAACTATCTAA+AGG + chr8_3:16300889-16300908 Msa1279340:CDS 25.0%
! ATATTATTCCTGTTGCTAAA+CGG + chr8_3:16300957-16300976 Msa1279340:CDS 25.0%
!!! TAGAGGATTTGTTATTTCTT+TGG + chr8_3:16301066-16301085 Msa1279340:intron 25.0%
! AGGTAGAATTTCAAGATTAT+TGG + chr8_3:16301814-16301833 Msa1279340:three_prime_UTR 25.0%
! GGTAGAATTTCAAGATTATT+GGG + chr8_3:16301815-16301834 Msa1279340:three_prime_UTR 25.0%
!!! ATTTTGAAGGTTCAACAATA+TGG - chr8_3:16301905-16301924 None:intergenic 25.0%
!! AATTTTGCAGAACATTTTGA+AGG - chr8_3:16301918-16301937 None:intergenic 25.0%
! AGTGGTGGAAAAAATTGTTA+TGG + chr8_3:16295395-16295414 Msa1279340:intron 30.0%
AAGTTAGTTAGAGGTTGTTA+GGG + chr8_3:16295488-16295507 Msa1279340:intron 30.0%
TGTTAGGGATGAAAGAAAAA+TGG + chr8_3:16295503-16295522 Msa1279340:intron 30.0%
GTTAGGGATGAAAGAAAAAT+GGG + chr8_3:16295504-16295523 Msa1279340:intron 30.0%
! GACCATAGTTTGACTTATAT+AGG + chr8_3:16295595-16295614 Msa1279340:intron 30.0%
CACCTATATAAGTCAAACTA+TGG - chr8_3:16295600-16295619 None:intergenic 30.0%
TCTTAATGACCAATAGCATT+TGG + chr8_3:16295678-16295697 Msa1279340:intron 30.0%
! ATGCAAATAATAAAAGTGCG+AGG + chr8_3:16295744-16295763 Msa1279340:intron 30.0%
! GATTAAAATGAGTTGAATGC+AGG + chr8_3:16296161-16296180 Msa1279340:intron 30.0%
GGACAAAGAAACTTAAATAG+GGG - chr8_3:16296347-16296366 None:intergenic 30.0%
CGGACAAAGAAACTTAAATA+GGG - chr8_3:16296348-16296367 None:intergenic 30.0%
! CCTATTTAAGTTTCTTTGTC+CGG + chr8_3:16296346-16296365 Msa1279340:intron 30.0%
! CTATTTAAGTTTCTTTGTCC+GGG + chr8_3:16296347-16296366 Msa1279340:intron 30.0%
! TATTTAAGTTTCTTTGTCCG+GGG + chr8_3:16296348-16296367 Msa1279340:intron 30.0%
! ATTAACATTTGCACTGCTTT+TGG + chr8_3:16296418-16296437 Msa1279340:intron 30.0%
! CTGTTTCTTGTTTGTATTTC+CGG - chr8_3:16296900-16296919 None:intergenic 30.0%
! GTTTCTTGTTTGTATTTCCT+CGG - chr8_3:16296959-16296978 None:intergenic 30.0%
GAGGAAATACAAACAAGAAA+CGG + chr8_3:16296958-16296977 Msa1279340:intron 30.0%
AGGAAATACAAACAAGAAAC+GGG + chr8_3:16296959-16296978 Msa1279340:intron 30.0%
CGGAAATACAAACAAAAGAT+AGG + chr8_3:16297018-16297037 Msa1279340:intron 30.0%
GAAAACATAGACATATATGC+AGG + chr8_3:16297078-16297097 Msa1279340:intron 30.0%
CAAGATACAAATTGAAAGTC+TGG + chr8_3:16297143-16297162 Msa1279340:intron 30.0%
GTTTAACAAGATACCAATTG+AGG + chr8_3:16297165-16297184 Msa1279340:intron 30.0%
AATGACAATTTACCCTCAAT+TGG - chr8_3:16297181-16297200 None:intergenic 30.0%
!! ATAGACATGACCATTTTTGT+TGG + chr8_3:16297215-16297234 Msa1279340:intron 30.0%
ATTGACATTGACATTGACAT+TGG + chr8_3:16297295-16297314 Msa1279340:intron 30.0%
ATTGACATTGACATTGACAT+TGG + chr8_3:16297295-16297314 Msa1279340:intron 30.0%
ATTGACATTGACATTGACAT+TGG + chr8_3:16297295-16297314 Msa1279340:intron 30.0%
ATTGACATTGACATTGACAT+TGG + chr8_3:16297295-16297314 Msa1279340:intron 30.0%
ATTGACATTGACATTGACAT+TGG + chr8_3:16297295-16297314 Msa1279340:intron 30.0%
ATTGACATTGACATTGACAT+TGG + chr8_3:16297295-16297314 Msa1279340:intron 30.0%
ATGAAAAGAATCTTATTCCC+CGG - chr8_3:16298435-16298454 None:intergenic 30.0%
!! TTTCAAATTGCATTGACTAG+AGG - chr8_3:16298806-16298825 None:intergenic 30.0%
TCATTACCAGATAACTAAAC+TGG - chr8_3:16298867-16298886 None:intergenic 30.0%
AATCACCAATTTGTGATTTG+TGG + chr8_3:16298933-16298952 Msa1279340:intron 30.0%
!!! TAGAAGCATCTTTTAATGCT+TGG + chr8_3:16299038-16299057 Msa1279340:CDS 30.0%
!! GTTGTTTAAATTGTTTTGCG+TGG + chr8_3:16299152-16299171 Msa1279340:intron 30.0%
AATTGAGCCAATAAAAGATG+TGG + chr8_3:16299560-16299579 Msa1279340:CDS 30.0%
AAACTTATCTGAGAAATGGA+AGG + chr8_3:16299602-16299621 Msa1279340:CDS 30.0%
AACAAAGTGCACAAAACAAA+TGG - chr8_3:16299702-16299721 None:intergenic 30.0%
!!! ATCCATTTATTTTGCTGACA+AGG - chr8_3:16300130-16300149 None:intergenic 30.0%
!! ATTGGTTAGTTATTTTCCCT+CGG + chr8_3:16300250-16300269 Msa1279340:intron 30.0%
TATTAGACCTTGTAAAACTC+CGG + chr8_3:16300471-16300490 Msa1279340:intron 30.0%
ATATCTGATTTATGCTTCAC+CGG - chr8_3:16300493-16300512 None:intergenic 30.0%
ATTATTTACACTGGAATTGC+AGG + chr8_3:16300522-16300541 Msa1279340:intron 30.0%
GACATCAATTTGGAAGTTAA+TGG + chr8_3:16300658-16300677 Msa1279340:CDS 30.0%
ATCAATTTGGAAGTTAATGG+TGG + chr8_3:16300661-16300680 Msa1279340:CDS 30.0%
TCAATTTGGAAGTTAATGGT+GGG + chr8_3:16300662-16300681 Msa1279340:CDS 30.0%
!! TGTTGCTTTGATTGAAATAG+AGG + chr8_3:16300759-16300778 Msa1279340:intron 30.0%
! GAAAACTATCTAAAGGCTTT+TGG + chr8_3:16300896-16300915 Msa1279340:CDS 30.0%
TAAAACAAGATAGCAATGAG+AGG - chr8_3:16301048-16301067 None:intergenic 30.0%
!!! TCATTGCTATCTTGTTTTAG+AGG + chr8_3:16301049-16301068 Msa1279340:intron 30.0%
TTCTTTGGTTAATGATTTCG+AGG + chr8_3:16301081-16301100 Msa1279340:intron 30.0%
TCAACAATTTCCTGTTACAA+GGG - chr8_3:16301139-16301158 None:intergenic 30.0%
ATCAACAATTTCCTGTTACA+AGG - chr8_3:16301140-16301159 None:intergenic 30.0%
TATCCACTGATGAATTAATG+GGG - chr8_3:16301356-16301375 None:intergenic 30.0%
CTATCCACTGATGAATTAAT+GGG - chr8_3:16301357-16301376 None:intergenic 30.0%
TCTATCCACTGATGAATTAA+TGG - chr8_3:16301358-16301377 None:intergenic 30.0%
!!! GACTGATGTTTTAACATTTG+TGG + chr8_3:16301791-16301810 Msa1279340:three_prime_UTR 30.0%
!!! TGATGTTTTAACATTTGTGG+AGG + chr8_3:16301794-16301813 Msa1279340:three_prime_UTR 30.0%
ATATATTCATGTCTCCTCTA+GGG + chr8_3:16301987-16302006 Msa1279340:three_prime_UTR 30.0%
! ATTCTTTTTGCCAATCAACA+TGG + chr8_3:16302080-16302099 Msa1279340:three_prime_UTR 30.0%
TATTCAAAAGCCATGTTGAT+TGG - chr8_3:16302093-16302112 None:intergenic 30.0%
TGGATGAAGATGAGTTAGTT+AGG + chr8_3:16295415-16295434 Msa1279340:intron 35.0%
GGATGAAGATGAGTTAGTTA+GGG + chr8_3:16295416-16295435 Msa1279340:intron 35.0%
GAAGTTAGTTAGAGGTTGTT+AGG + chr8_3:16295487-16295506 Msa1279340:intron 35.0%
CTGAAAATTAACGTAAAGCG+AGG + chr8_3:16295810-16295829 Msa1279340:intron 35.0%
AAAAGACTAAAATGCCCCTA+GGG + chr8_3:16296027-16296046 Msa1279340:intron 35.0%
! CAGCTGTTATACCCTAATTT+TGG - chr8_3:16296324-16296343 None:intergenic 35.0%
CCGGACAAAGAAACTTAAAT+AGG - chr8_3:16296349-16296368 None:intergenic 35.0%
AGACGAAGTCTTAGAATTGA+CGG + chr8_3:16296378-16296397 Msa1279340:intron 35.0%
CTTGATGTCTATAAATCCCT+TGG - chr8_3:16296550-16296569 None:intergenic 35.0%
CAAGGGATTTATAGACATCA+AGG + chr8_3:16296548-16296567 Msa1279340:intron 35.0%
AGACATCAAGGTAGAAAGAA+CGG + chr8_3:16296560-16296579 Msa1279340:intron 35.0%
CTTGATGTCTATAAATCCCT+TGG - chr8_3:16296550-16296569 None:intergenic 35.0%
CAAGGGATTTATAGACATCA+AGG + chr8_3:16296548-16296567 Msa1279340:intron 35.0%
AGACATCAAGGTAGAAAGAA+CGG + chr8_3:16296560-16296579 Msa1279340:intron 35.0%
! TGTCTCTTGTTTGTATCTCT+CGG - chr8_3:16296779-16296798 None:intergenic 35.0%
! GTTTCTTGTTTGTATCTCCT+CGG - chr8_3:16296839-16296858 None:intergenic 35.0%
AGGAGATACAAACAAGAAAC+AGG + chr8_3:16296839-16296858 Msa1279340:intron 35.0%
CGGAAATACAAACAAGAAAC+AGG + chr8_3:16296898-16296917 Msa1279340:intron 35.0%
! TACTTTTGGGCCAACAAAAA+TGG - chr8_3:16297228-16297247 None:intergenic 35.0%
!! ATTGACATTGGCATTGACAT+TGG + chr8_3:16297307-16297326 Msa1279340:intron 35.0%
ATCGACATTGACATTGACAT+TGG + chr8_3:16297386-16297405 Msa1279340:intron 35.0%
ATTGACATTGACATTGGCAT+TGG + chr8_3:16297301-16297320 Msa1279340:intron 35.0%
ATTGACATTGACATTGGCAT+TGG + chr8_3:16297301-16297320 Msa1279340:intron 35.0%
TTGGCATTTGACATTGACAT+TGG + chr8_3:16297809-16297828 Msa1279340:intron 35.0%
GAATGCTTGAAATGCATGAT+TGG + chr8_3:16298076-16298095 Msa1279340:intron 35.0%
TTGGCAGAGAAATTTCACAA+AGG + chr8_3:16298107-16298126 Msa1279340:intron 35.0%
AGACAAGACATTGGAAGATT+GGG + chr8_3:16298131-16298150 Msa1279340:intron 35.0%
GAGGGCAATAAAACTTGTAA+AGG + chr8_3:16298240-16298259 Msa1279340:intron 35.0%
GGCAATAAAACTTGTAAAGG+AGG + chr8_3:16298243-16298262 Msa1279340:intron 35.0%
AAGGCAAATCAGGCAAAAAT+GGG - chr8_3:16298461-16298480 None:intergenic 35.0%
ACATACATGAACACTGAACA+TGG - chr8_3:16298773-16298792 None:intergenic 35.0%
!! GATTTGCTGCTGTCATAAAA+TGG + chr8_3:16298894-16298913 Msa1279340:intron 35.0%
! TTGCAGATGATAATGATGCA+AGG + chr8_3:16298975-16298994 Msa1279340:intron 35.0%
AAATGACATCACAGAATCAG+AGG - chr8_3:16299278-16299297 None:intergenic 35.0%
ACATGATCACCTTTGGTAAA+GGG - chr8_3:16299465-16299484 None:intergenic 35.0%
! TGACCTTCCACATCTTTTAT+TGG - chr8_3:16299570-16299589 None:intergenic 35.0%
ATCATGAGACACAATTTCCA+AGG - chr8_3:16299659-16299678 None:intergenic 35.0%
! CACTTTGTTCAGCTTGATTT+TGG + chr8_3:16299713-16299732 Msa1279340:intron 35.0%
GCTAACACTTTACAACATGA+GGG - chr8_3:16299998-16300017 None:intergenic 35.0%
TGCTAACACTTTACAACATG+AGG - chr8_3:16299999-16300018 None:intergenic 35.0%
! GTTGTAAAGTGTTAGCACTA+CGG + chr8_3:16300002-16300021 Msa1279340:intron 35.0%
! TTGTAAAGTGTTAGCACTAC+GGG + chr8_3:16300003-16300022 Msa1279340:intron 35.0%
CACCTTGTCAGCAAAATAAA+TGG + chr8_3:16300125-16300144 Msa1279340:intron 35.0%
ATAACATCACAGTGAGAATC+TGG + chr8_3:16300171-16300190 Msa1279340:intron 35.0%
GAGGGAAAATAACTAACCAA+TGG - chr8_3:16300251-16300270 None:intergenic 35.0%
TCAACAACAAACATTTCCGA+GGG - chr8_3:16300269-16300288 None:intergenic 35.0%
ATCAACAACAAACATTTCCG+AGG - chr8_3:16300270-16300289 None:intergenic 35.0%
TGATATTACATTCCCTGACA+AGG + chr8_3:16300294-16300313 Msa1279340:intron 35.0%
AGAAAACAGCATACCTCTAT+TGG - chr8_3:16300452-16300471 None:intergenic 35.0%
GGTGCAGTCTTAAAGTATAT+GGG + chr8_3:16300616-16300635 Msa1279340:CDS 35.0%
GTGCAGTCTTAAAGTATATG+GGG + chr8_3:16300617-16300636 Msa1279340:CDS 35.0%
TGCAGTCTTAAAGTATATGG+GGG + chr8_3:16300618-16300637 Msa1279340:CDS 35.0%
TTTAGCATTGCTTGCAAAAC+AGG + chr8_3:16300705-16300724 Msa1279340:CDS 35.0%
TCAAAAGTTCAGAGATCATC+TGG - chr8_3:16300739-16300758 None:intergenic 35.0%
!!! TATCTAAAGGCTTTTGGAGT+TGG + chr8_3:16300902-16300921 Msa1279340:CDS 35.0%
TGATTTCGAGGAATCATATG+TGG + chr8_3:16301093-16301112 Msa1279340:intron 35.0%
!! CTTTCTAAAATGTCAGATGG+TGG - chr8_3:16301532-16301551 None:intergenic 35.0%
!! CACCATCTGACATTTTAGAA+AGG + chr8_3:16301530-16301549 Msa1279340:CDS 35.0%
!! CACCTTTCTAAAATGTCAGA+TGG - chr8_3:16301535-16301554 None:intergenic 35.0%
GATACTGCGGAATTAGATAA+TGG - chr8_3:16301571-16301590 None:intergenic 35.0%
TTGTGTATCAATCCATTGCT+AGG - chr8_3:16301628-16301647 None:intergenic 35.0%
! TCATCATTGGTTACATAGTC+TGG + chr8_3:16301664-16301683 Msa1279340:exon 35.0%
! CATCATTGGTTACATAGTCT+GGG + chr8_3:16301665-16301684 Msa1279340:exon 35.0%
TGAATGACCAGAAACTTCAA+AGG + chr8_3:16301766-16301785 Msa1279340:three_prime_UTR 35.0%
TGAAGGTTCAACAATATGGA+AGG - chr8_3:16301901-16301920 None:intergenic 35.0%
CATATATTCATGTCTCCTCT+AGG + chr8_3:16301986-16302005 Msa1279340:three_prime_UTR 35.0%
TATATTCATGTCTCCTCTAG+GGG + chr8_3:16301988-16302007 Msa1279340:three_prime_UTR 35.0%
ACAAACAATAAATCCCCTAG+AGG - chr8_3:16302004-16302023 None:intergenic 35.0%
ATTAGACAAGCTCTTAAAGC+TGG + chr8_3:16302045-16302064 Msa1279340:three_prime_UTR 35.0%
TTAGACAAGCTCTTAAAGCT+GGG + chr8_3:16302046-16302065 Msa1279340:three_prime_UTR 35.0%
GGTTGAAGTGATGAAGAAAG+TGG + chr8_3:16295377-16295396 Msa1279340:intron 40.0%
TGAAGTGATGAAGAAAGTGG+TGG + chr8_3:16295380-16295399 Msa1279340:intron 40.0%
TGAAGATGAGTTAGTTAGGG+TGG + chr8_3:16295419-16295438 Msa1279340:intron 40.0%
! AGTGGTGGAGGAAATTAGTT+AGG + chr8_3:16295446-16295465 Msa1279340:intron 40.0%
! GTGGTGGAGGAAATTAGTTA+GGG + chr8_3:16295447-16295466 Msa1279340:intron 40.0%
GAAATTAGTTAGGGTGGTGA+AGG + chr8_3:16295456-16295475 Msa1279340:intron 40.0%
GTGTGATGCTTATGACCAAT+TGG + chr8_3:16295622-16295641 Msa1279340:intron 40.0%
ACCAATTGGAATGAGACATG+TGG + chr8_3:16295636-16295655 Msa1279340:intron 40.0%
ACCAATAGCATTTGGACACA+TGG + chr8_3:16295686-16295705 Msa1279340:intron 40.0%
AAATGACCAAAATGCCCCTA+GGG + chr8_3:16295871-16295890 Msa1279340:intron 40.0%
!! TCGAGTCATTTTAGTCCCTA+GGG - chr8_3:16295889-16295908 None:intergenic 40.0%
!! TTCGAGTCATTTTAGTCCCT+AGG - chr8_3:16295890-16295909 None:intergenic 40.0%
GAAAAGACTAAAATGCCCCT+AGG + chr8_3:16296026-16296045 Msa1279340:intron 40.0%
AAAGACTAAAATGCCCCTAG+GGG + chr8_3:16296028-16296047 Msa1279340:intron 40.0%
GACGAAGTCTTAGAATTGAC+GGG + chr8_3:16296379-16296398 Msa1279340:intron 40.0%
TGAATGCAAGACAATCGAAC+CGG + chr8_3:16296501-16296520 Msa1279340:intron 40.0%
GATGTCTATAAATCCCTTGG+TGG - chr8_3:16296547-16296566 None:intergenic 40.0%
GACATCAAGGTAGAAAGAAC+GGG + chr8_3:16296561-16296580 Msa1279340:intron 40.0%
TGAATGCAAGACAATCGAAC+CGG + chr8_3:16296501-16296520 Msa1279340:intron 40.0%
GATGTCTATAAATCCCTTGG+TGG - chr8_3:16296547-16296566 None:intergenic 40.0%
GACATCAAGGTAGAAAGAAC+GGG + chr8_3:16296561-16296580 Msa1279340:intron 40.0%
GAGAGATACAAACAAGAGAC+AGG + chr8_3:16296778-16296797 Msa1279340:intron 40.0%
AACAGGTACAAGCTGTTCTT+TGG + chr8_3:16296856-16296875 Msa1279340:intron 40.0%
TGTTTGTATTTCCGGTCAAG+TGG - chr8_3:16296892-16296911 None:intergenic 40.0%
AACAGGTACAAGCTGTTCTT+TGG + chr8_3:16296856-16296875 Msa1279340:intron 40.0%
TTTGTATTTCCTCGGTCAAG+TGG - chr8_3:16296951-16296970 None:intergenic 40.0%
TGTTTGTATTTCCGGTCAAG+TGG - chr8_3:16296892-16296911 None:intergenic 40.0%
GATAGGTACAAGCTGTTCTT+TGG + chr8_3:16297035-16297054 Msa1279340:intron 40.0%
! TGTCTATGTTTTCGGTCAAG+TGG - chr8_3:16297071-16297090 None:intergenic 40.0%
GTATCTTGTTACTGGTCAAG+TGG - chr8_3:16297131-16297150 None:intergenic 40.0%
!! ATTGGCATTGACATTGGCAT+TGG + chr8_3:16297355-16297374 Msa1279340:intron 40.0%
GCTTGAAATGCATGATTGGT+TGG + chr8_3:16298080-16298099 Msa1279340:intron 40.0%
! TGCATGATTGGTTGGCAATT+TGG + chr8_3:16298088-16298107 Msa1279340:intron 40.0%
CAGACAAGACATTGGAAGAT+TGG + chr8_3:16298130-16298149 Msa1279340:intron 40.0%
TTTAATACGTCTCGCAACGA+CGG - chr8_3:16298211-16298230 None:intergenic 40.0%
TGCGAGACGTATTAAAACCA+TGG + chr8_3:16298215-16298234 Msa1279340:intron 40.0%
ACGTATTAAAACCATGGCTG+AGG + chr8_3:16298221-16298240 Msa1279340:intron 40.0%
CGTATTAAAACCATGGCTGA+GGG + chr8_3:16298222-16298241 Msa1279340:intron 40.0%
TGTATCCAAGAACCTTCCAA+GGG - chr8_3:16298270-16298289 None:intergenic 40.0%
AGGCAAATCAGGCAAAAATG+GGG - chr8_3:16298460-16298479 None:intergenic 40.0%
GAAGGCAAATCAGGCAAAAA+TGG - chr8_3:16298462-16298481 None:intergenic 40.0%
! GCTAAGTTGAAAACCCGAAA+GGG - chr8_3:16298527-16298546 None:intergenic 40.0%
! GTTATCTGGTAATGAAGAGC+AGG + chr8_3:16298872-16298891 Msa1279340:intron 40.0%
CTGTCATAAAATGGTGTGTG+TGG + chr8_3:16298903-16298922 Msa1279340:intron 40.0%
CGCAAAGCAACAACTTTCAA+AGG - chr8_3:16299091-16299110 None:intergenic 40.0%
!! TTGAAAGTTGTTGCTTTGCG+TGG + chr8_3:16299091-16299110 Msa1279340:CDS 40.0%
TATTCCTCCTTCATGGATCA+AGG + chr8_3:16299117-16299136 Msa1279340:CDS 40.0%
! GTTCTGTTTTCTGCTCATAC+TGG + chr8_3:16299247-16299266 Msa1279340:intron 40.0%
CTATCCATTCCCTTTACCAA+AGG + chr8_3:16299453-16299472 Msa1279340:CDS 40.0%
ATCACCTTTGGTAAAGGGAA+TGG - chr8_3:16299460-16299479 None:intergenic 40.0%
GACATGATCACCTTTGGTAA+AGG - chr8_3:16299466-16299485 None:intergenic 40.0%
GAGCCAATAAAAGATGTGGA+AGG + chr8_3:16299564-16299583 Msa1279340:CDS 40.0%
AAGATGTGGAAGGTCAAGAA+TGG + chr8_3:16299574-16299593 Msa1279340:CDS 40.0%
AACGCATACACAGATATACG+GGG - chr8_3:16300070-16300089 None:intergenic 40.0%
CAACGCATACACAGATATAC+GGG - chr8_3:16300071-16300090 None:intergenic 40.0%
CCAACGCATACACAGATATA+CGG - chr8_3:16300072-16300091 None:intergenic 40.0%
ATCTGGTGTATGTATCCCAT+TGG + chr8_3:16300188-16300207 Msa1279340:intron 40.0%
CATGCTCAACATGAACCAAT+GGG - chr8_3:16300206-16300225 None:intergenic 40.0%
TCATGCTCAACATGAACCAA+TGG - chr8_3:16300207-16300226 None:intergenic 40.0%
ATATACCTGGAACCTTGTCA+GGG - chr8_3:16300309-16300328 None:intergenic 40.0%
CGGTGCAGTCTTAAAGTATA+TGG + chr8_3:16300615-16300634 Msa1279340:CDS 40.0%
!!! TTTTGGAGTTGGAGATGTGT+GGG + chr8_3:16300913-16300932 Msa1279340:CDS 40.0%
TTAGACATCCGTTTAGCAAC+AGG - chr8_3:16300968-16300987 None:intergenic 40.0%
GCAGTTATTGTTCCAAAGTC+TGG + chr8_3:16300992-16301011 Msa1279340:CDS 40.0%
! AAAGTCTGGAGCGAGTTTAT+GGG + chr8_3:16301006-16301025 Msa1279340:CDS 40.0%
GAGTTTATGGGCAGATCTTT+GGG + chr8_3:16301018-16301037 Msa1279340:CDS 40.0%
TATAAAGCCACCCTTGTAAC+AGG + chr8_3:16301126-16301145 Msa1279340:intron 40.0%
ACAATTTCCTGTTACAAGGG+TGG - chr8_3:16301136-16301155 None:intergenic 40.0%
GTCATTGTCTAGTGTGTAAG+AGG - chr8_3:16301225-16301244 None:intergenic 40.0%
CCTCAAGGATTCAAACAAGT+CGG + chr8_3:16301305-16301324 Msa1279340:CDS 40.0%
AGGATTCAAACAAGTCGGAT+TGG + chr8_3:16301310-16301329 Msa1279340:CDS 40.0%
! ATTCAAACAAGTCGGATTGG+TGG + chr8_3:16301313-16301332 Msa1279340:CDS 40.0%
!! TTCAAACAAGTCGGATTGGT+GGG + chr8_3:16301314-16301333 Msa1279340:CDS 40.0%
CACTGATGAATTAATGGGGA+TGG - chr8_3:16301352-16301371 None:intergenic 40.0%
CATCCCCATTAATTCATCAG+TGG + chr8_3:16301350-16301369 Msa1279340:CDS 40.0%
TGGAATGACCTTGAAGAAGA+GGG - chr8_3:16301444-16301463 None:intergenic 40.0%
! AGTTAACTCCAAAGGCACAT+TGG - chr8_3:16301467-16301486 None:intergenic 40.0%
!! TGTGCCTTTGGAGTTAACTA+AGG + chr8_3:16301468-16301487 Msa1279340:CDS 40.0%
!! GTGCCTTTGGAGTTAACTAA+GGG + chr8_3:16301469-16301488 Msa1279340:CDS 40.0%
CTACCCTTAGTTAACTCCAA+AGG - chr8_3:16301475-16301494 None:intergenic 40.0%
!! CTTTGGAGTTAACTAAGGGT+AGG + chr8_3:16301473-16301492 Msa1279340:CDS 40.0%
CTAGACACCAATCTCATTGA+TGG + chr8_3:16301502-16301521 Msa1279340:CDS 40.0%
! ATTGCTAGGTTTCTGGATTG+AGG - chr8_3:16301614-16301633 None:intergenic 40.0%
TCAATCCAGAAACCTAGCAA+TGG + chr8_3:16301613-16301632 Msa1279340:CDS 40.0%
TCAATCCATTGCTAGGTTTC+TGG - chr8_3:16301621-16301640 None:intergenic 40.0%
GCGTCAGTATATCTCATCAT+TGG + chr8_3:16301651-16301670 Msa1279340:CDS 40.0%
! TGACTTGCGTAATGAGCTAT+TGG + chr8_3:16301704-16301723 Msa1279340:three_prime_UTR 40.0%
GACTTGCGTAATGAGCTATT+GGG + chr8_3:16301705-16301724 Msa1279340:three_prime_UTR 40.0%
!! CAGTCAACCTTTGAAGTTTC+TGG - chr8_3:16301776-16301795 None:intergenic 40.0%
CAACAATAAGTCGTTAACGC+TGG + chr8_3:16301848-16301867 Msa1279340:three_prime_UTR 40.0%
GTTAGTTAGGGTGGAGAAAG+TGG + chr8_3:16295428-16295447 Msa1279340:intron 45.0%
GTGGAGGAAATTAGTTAGGG+TGG + chr8_3:16295450-16295469 Msa1279340:intron 45.0%
ATTAGTTAGGGTGGTGAAGG+AGG + chr8_3:16295459-16295478 Msa1279340:intron 45.0%
AGGTGGAGGAAGTTAGTTAG+AGG + chr8_3:16295479-16295498 Msa1279340:intron 45.0%
GCCACATGTCTCATTCCAAT+TGG - chr8_3:16295640-16295659 None:intergenic 45.0%
GCCATGTGTCCAAATGCTAT+TGG - chr8_3:16295690-16295709 None:intergenic 45.0%
GAAATGACCAAAATGCCCCT+AGG + chr8_3:16295870-16295889 Msa1279340:intron 45.0%
!!! TTTAGTCCCTAGGGGCATTT+TGG - chr8_3:16295880-16295899 None:intergenic 45.0%
!! CGAGTCATTTTAGTCCCTAG+GGG - chr8_3:16295888-16295907 None:intergenic 45.0%
TCTAGTCAGTTTAGCCCCTA+GGG - chr8_3:16296045-16296064 None:intergenic 45.0%
TTCTAGTCAGTTTAGCCCCT+AGG - chr8_3:16296046-16296065 None:intergenic 45.0%
GACAATCGAACCGGAATCTA+CGG + chr8_3:16296510-16296529 Msa1279340:intron 45.0%
ACAATCGAACCGGAATCTAC+GGG + chr8_3:16296511-16296530 Msa1279340:intron 45.0%
GACAATCGAACCGGAATCTA+CGG + chr8_3:16296510-16296529 Msa1279340:intron 45.0%
ACAATCGAACCGGAATCTAC+GGG + chr8_3:16296511-16296530 Msa1279340:intron 45.0%
GACAGGTACAAGCTGTTCTT+TGG + chr8_3:16296735-16296754 Msa1279340:intron 45.0%
GTTTGTATCTCTCGGTCAAG+TGG - chr8_3:16296771-16296790 None:intergenic 45.0%
GACAGGTACAAGCTGTTCTT+TGG + chr8_3:16296735-16296754 Msa1279340:intron 45.0%
TTTGTATCTCCTCGGTCAAG+TGG - chr8_3:16296831-16296850 None:intergenic 45.0%
AACGGGTACAAGCTGTTCTT+CGG + chr8_3:16296976-16296995 Msa1279340:intron 45.0%
TGCAGGTACAAGCTGTTCTT+TGG + chr8_3:16297095-16297114 Msa1279340:intron 45.0%
GAATTTCGACAGCTGACAGT+TGG + chr8_3:16297978-16297997 Msa1279340:intron 45.0%
CACAAAGGCAGACAAGACAT+TGG + chr8_3:16298122-16298141 Msa1279340:intron 45.0%
TTCACAGGGGAAAACCTCTT+CGG + chr8_3:16298180-16298199 Msa1279340:intron 45.0%
!!! AGTTTTATTGCCCTCAGCCA+TGG - chr8_3:16298235-16298254 None:intergenic 45.0%
AACTTGTAAAGGAGGACCCT+TGG + chr8_3:16298251-16298270 Msa1279340:intron 45.0%
CTGTATCCAAGAACCTTCCA+AGG - chr8_3:16298271-16298290 None:intergenic 45.0%
CTTGGAAGGTTCTTGGATAC+AGG + chr8_3:16298269-16298288 Msa1279340:intron 45.0%
! TGTCAGTGCTGGGTAAACAT+TGG + chr8_3:16298308-16298327 Msa1279340:intron 45.0%
ACATTGGATGTTCGCATCTG+TGG + chr8_3:16298324-16298343 Msa1279340:intron 45.0%
GGTGAATCGAAAACCCGAAA+GGG - chr8_3:16298414-16298433 None:intergenic 45.0%
!!! CTTTCGGGTTTTCGATTCAC+CGG + chr8_3:16298413-16298432 Msa1279340:intron 45.0%
!!! TTTCGGGTTTTCGATTCACC+GGG + chr8_3:16298414-16298433 Msa1279340:intron 45.0%
! TTTGCCTGATTTGCCTTCAC+AGG + chr8_3:16298464-16298483 Msa1279340:intron 45.0%
ACAACCTGTGAAGGCAAATC+AGG - chr8_3:16298471-16298490 None:intergenic 45.0%
CTTCACAGGTTGTCAATCAG+CGG + chr8_3:16298478-16298497 Msa1279340:intron 45.0%
TTCACAGGTTGTCAATCAGC+GGG + chr8_3:16298479-16298498 Msa1279340:intron 45.0%
AAGTTGAAAACCCGAAAGGG+CGG - chr8_3:16298524-16298543 None:intergenic 45.0%
! CGCTAAGTTGAAAACCCGAA+AGG - chr8_3:16298528-16298547 None:intergenic 45.0%
GTAACACGTGTGTCAGACAT+TGG - chr8_3:16298701-16298720 None:intergenic 45.0%
!! TGGCACCGACAAGTAAAAAC+TGG - chr8_3:16298753-16298772 None:intergenic 45.0%
AAAATGGTGTGTGTGGTCAC+AGG + chr8_3:16298910-16298929 Msa1279340:intron 45.0%
GCAAGGAAACATGATGCCAA+TGG + chr8_3:16298992-16299011 Msa1279340:CDS 45.0%
TCACAGACCTTGATCCATGA+AGG - chr8_3:16299127-16299146 None:intergenic 45.0%
!! CTGTCTCTCACTAGCTTGTT+GGG + chr8_3:16299217-16299236 Msa1279340:intron 45.0%
TGTTGGGACATGATCACCTT+TGG - chr8_3:16299472-16299491 None:intergenic 45.0%
TCATGTCCCAACAACTGCTT+TGG + chr8_3:16299479-16299498 Msa1279340:CDS 45.0%
GCTTTGGCAGCTGATATTGT+CGG + chr8_3:16299495-16299514 Msa1279340:CDS 45.0%
GCAGCTGATATTGTCGGTAT+TGG + chr8_3:16299501-16299520 Msa1279340:CDS 45.0%
ATACACAGATATACGGGGAG+GGG - chr8_3:16300065-16300084 None:intergenic 45.0%
CATACACAGATATACGGGGA+GGG - chr8_3:16300066-16300085 None:intergenic 45.0%
CCGTATATCTGTGTATGCGT+TGG + chr8_3:16300069-16300088 Msa1279340:intron 45.0%
GATATACCTGGAACCTTGTC+AGG - chr8_3:16300310-16300329 None:intergenic 45.0%
AGTTCCTGCGTAGATATACC+TGG - chr8_3:16300322-16300341 None:intergenic 45.0%
ATATCTACGCAGGAACTGTG+AGG + chr8_3:16300325-16300344 Msa1279340:CDS 45.0%
TATCTACGCAGGAACTGTGA+GGG + chr8_3:16300326-16300345 Msa1279340:CDS 45.0%
TGGACCCTGAAGGTGATATA+TGG + chr8_3:16300354-16300373 Msa1279340:CDS 45.0%
GGACCCTGAAGGTGATATAT+GGG + chr8_3:16300355-16300374 Msa1279340:CDS 45.0%
CAGCCCATATATCACCTTCA+GGG - chr8_3:16300361-16300380 None:intergenic 45.0%
! GCATAAGTTGGCTCCAATAG+AGG + chr8_3:16300436-16300455 Msa1279340:CDS 45.0%
! TGCTTCACCGGAGTTTTACA+AGG - chr8_3:16300481-16300500 None:intergenic 45.0%
TTACACTGGAATTGCAGGAC+TGG + chr8_3:16300527-16300546 Msa1279340:intron 45.0%
TACACTGGAATTGCAGGACT+GGG + chr8_3:16300528-16300547 Msa1279340:intron 45.0%
GACTCTCCTAGAGAAGTTGT+CGG + chr8_3:16300595-16300614 Msa1279340:CDS 45.0%
!!! CTTTTGGAGTTGGAGATGTG+TGG + chr8_3:16300912-16300931 Msa1279340:CDS 45.0%
CATAAACTCGCTCCAGACTT+TGG - chr8_3:16301007-16301026 None:intergenic 45.0%
! CAAAGTCTGGAGCGAGTTTA+TGG + chr8_3:16301005-16301024 Msa1279340:CDS 45.0%
CGAGTTTATGGGCAGATCTT+TGG + chr8_3:16301017-16301036 Msa1279340:CDS 45.0%
! CCGACTTGTTTGAATCCTTG+AGG - chr8_3:16301308-16301327 None:intergenic 45.0%
GAATGACCTTGAAGAAGAGG+GGG - chr8_3:16301442-16301461 None:intergenic 45.0%
GGAATGACCTTGAAGAAGAG+GGG - chr8_3:16301443-16301462 None:intergenic 45.0%
GTGGAATGACCTTGAAGAAG+AGG - chr8_3:16301445-16301464 None:intergenic 45.0%
TCATTCCACCAATGTGCCTT+TGG + chr8_3:16301456-16301475 Msa1279340:CDS 45.0%
! TAACTCCAAAGGCACATTGG+TGG - chr8_3:16301464-16301483 None:intergenic 45.0%
AGTTAACTAAGGGTAGGCCA+AGG + chr8_3:16301479-16301498 Msa1279340:CDS 45.0%
! ATGAGATTGGTGTCTAGCCT+TGG - chr8_3:16301499-16301518 None:intergenic 45.0%
TGGTGCTCCATCAATGAGAT+TGG - chr8_3:16301512-16301531 None:intergenic 45.0%
CCAGTGGTAATCTGATACTG+CGG - chr8_3:16301584-16301603 None:intergenic 45.0%
! CATTGGTTACATAGTCTGGG+CGG + chr8_3:16301668-16301687 Msa1279340:exon 45.0%
GGGCTGTCGAATACATACAA+AGG + chr8_3:16301725-16301744 Msa1279340:three_prime_UTR 45.0%
ACAAGGGCAAAGGTCAAAGA+TGG - chr8_3:16302116-16302135 None:intergenic 45.0%
AGGATCAAGAACAAGGGCAA+AGG - chr8_3:16302126-16302145 None:intergenic 45.0%
AAGGCGAGGATCAAGAACAA+GGG - chr8_3:16302132-16302151 None:intergenic 45.0%
TTGTTCTTGATCCTCGCCTT+GGG + chr8_3:16302132-16302151 Msa1279340:three_prime_UTR 45.0%
!!! AAATAATTAAAAATGATTTT+TGG + chr8_3:16295534-16295553 Msa1279340:intron 5.0%
!! AAATCTATAAAATAATTTAA+TGG - chr8_3:16299329-16299348 None:intergenic 5.0%
ATGGAGGTTTGTGGTGGTTG+TGG + chr8_3:16295353-16295372 Msa1279340:intron 50.0%
AGTTAGGGTGGAGAAAGTGG+TGG + chr8_3:16295431-16295450 Msa1279340:intron 50.0%
GCATTTGGACACATGGCACT+TGG + chr8_3:16295693-16295712 Msa1279340:intron 50.0%
CTAGTCAGTTTAGCCCCTAG+GGG - chr8_3:16296044-16296063 None:intergenic 50.0%
AGAACGGGCAACAACTAGAC+AGG + chr8_3:16296718-16296737 Msa1279340:intron 50.0%
! GATCGAACTTGCCACTTGAC+CGG + chr8_3:16296757-16296776 Msa1279340:intron 50.0%
! GATCGAACTTGCCACTTGAC+CGG + chr8_3:16296757-16296776 Msa1279340:intron 50.0%
TTGGAAGATTGGGCACGTAG+TGG + chr8_3:16298141-16298160 Msa1279340:intron 50.0%
TCGTGCTGCGACATATTCAC+AGG + chr8_3:16298165-16298184 Msa1279340:intron 50.0%
CGTGCTGCGACATATTCACA+GGG + chr8_3:16298166-16298185 Msa1279340:intron 50.0%
GTGCTGCGACATATTCACAG+GGG + chr8_3:16298167-16298186 Msa1279340:intron 50.0%
TGTAAAGGAGGACCCTTGGA+AGG + chr8_3:16298255-16298274 Msa1279340:intron 50.0%
AGGGCGGTTCAGGCAAAAAT+GGG - chr8_3:16298395-16298414 None:intergenic 50.0%
AAGGGCGGTTCAGGCAAAAA+TGG - chr8_3:16298396-16298415 None:intergenic 50.0%
! TTTTGCCTGAACCGCCCTTT+CGG + chr8_3:16298397-16298416 Msa1279340:intron 50.0%
GAATCGAAAACCCGAAAGGG+CGG - chr8_3:16298411-16298430 None:intergenic 50.0%
CGGTGAATCGAAAACCCGAA+AGG - chr8_3:16298415-16298434 None:intergenic 50.0%
!! TTCGGGTTTTCGATTCACCG+GGG + chr8_3:16298415-16298434 Msa1279340:intron 50.0%
! CGCTGATTGACAACCTGTGA+AGG - chr8_3:16298480-16298499 None:intergenic 50.0%
TCACAGGTTGTCAATCAGCG+GGG + chr8_3:16298480-16298499 Msa1279340:intron 50.0%
! TTTTGCCTAAGCCGCCCTTT+CGG + chr8_3:16298510-16298529 Msa1279340:intron 50.0%
! GTGGCTCTATTCCTCCTTCA+TGG + chr8_3:16299110-16299129 Msa1279340:CDS 50.0%
CAGACCTTGATCCATGAAGG+AGG - chr8_3:16299124-16299143 None:intergenic 50.0%
! GCTGTCTCTCACTAGCTTGT+TGG + chr8_3:16299216-16299235 Msa1279340:intron 50.0%
CAGCTGCCAAAGCAGTTGTT+GGG - chr8_3:16299488-16299507 None:intergenic 50.0%
TCAGCTGCCAAAGCAGTTGT+TGG - chr8_3:16299489-16299508 None:intergenic 50.0%
!! TTGTCGGTATTGGTGACTCG+TGG + chr8_3:16299511-16299530 Msa1279340:CDS 50.0%
ATCTGAGTGCTTGTCTGCCA+AGG + chr8_3:16299820-16299839 Msa1279340:intron 50.0%
TCTGAGTGCTTGTCTGCCAA+GGG + chr8_3:16299821-16299840 Msa1279340:intron 50.0%
CAGTATCTAACATGGCCCCT+TGG - chr8_3:16299840-16299859 None:intergenic 50.0%
TACACAGATATACGGGGAGG+GGG - chr8_3:16300064-16300083 None:intergenic 50.0%
GCATACACAGATATACGGGG+AGG - chr8_3:16300067-16300086 None:intergenic 50.0%
! CTGTGTATGCGTTGGTCACT+AGG + chr8_3:16300077-16300096 Msa1279340:intron 50.0%
ACATTCCCTGACAAGGTTCC+AGG + chr8_3:16300301-16300320 Msa1279340:intron 50.0%
GGTTCCAGGTATATCTACGC+AGG + chr8_3:16300315-16300334 Msa1279340:intron 50.0%
GCAGCCCATATATCACCTTC+AGG - chr8_3:16300362-16300381 None:intergenic 50.0%
CATGCATCCCCATCGATATG+GGG - chr8_3:16300384-16300403 None:intergenic 50.0%
CCATGCATCCCCATCGATAT+GGG - chr8_3:16300385-16300404 None:intergenic 50.0%
ACCATGCATCCCCATCGATA+TGG - chr8_3:16300386-16300405 None:intergenic 50.0%
GAAATCCTCCCTGCAAGATC+AGG - chr8_3:16300568-16300587 None:intergenic 50.0%
TCTTGCAGGGAGGATTTCCA+TGG + chr8_3:16300570-16300589 Msa1279340:CDS 50.0%
! TTCTCTAGGAGAGTCCACCA+TGG - chr8_3:16300590-16300609 None:intergenic 50.0%
! ACTGCACCGACAACTTCTCT+AGG - chr8_3:16300604-16300623 None:intergenic 50.0%
ATGTGTGGGTAGCTGTTGGA+TGG + chr8_3:16300927-16300946 Msa1279340:CDS 50.0%
GTTTGAATCCTTGAGGCAGC+AGG - chr8_3:16301301-16301320 None:intergenic 50.0%
GGGATCACCTCCTGCTTAAA+GGG - chr8_3:16301409-16301428 None:intergenic 50.0%
TGGGATCACCTCCTGCTTAA+AGG - chr8_3:16301410-16301429 None:intergenic 50.0%
TTTAAGCAGGAGGTGATCCC+AGG + chr8_3:16301409-16301428 Msa1279340:CDS 50.0%
CCGCAGTATCAGATTACCAC+TGG + chr8_3:16301581-16301600 Msa1279340:CDS 50.0%
CAAGGCGAGGATCAAGAACA+AGG - chr8_3:16302133-16302152 None:intergenic 50.0%
CTTGTTCTTGATCCTCGCCT+TGG + chr8_3:16302131-16302150 Msa1279340:three_prime_UTR 50.0%
GAGGTTTGTGGTGGTTGTGG+AGG + chr8_3:16295356-16295375 Msa1279340:intron 55.0%
TAGGGTGGAGAAAGTGGTGG+AGG + chr8_3:16295434-16295453 Msa1279340:intron 55.0%
AGTTAGGGTGGTGAAGGAGG+TGG + chr8_3:16295462-16295481 Msa1279340:intron 55.0%
GACTTCGTCTCTTGACTCCC+CGG - chr8_3:16296368-16296387 None:intergenic 55.0%
GTGACACAGCCCGTAGATTC+CGG - chr8_3:16296523-16296542 None:intergenic 55.0%
GTGACACAGCCCGTAGATTC+CGG - chr8_3:16296523-16296542 None:intergenic 55.0%
! TCGAACTTGCCACTTGACCG+AGG + chr8_3:16296759-16296778 Msa1279340:intron 55.0%
! TCGAACTTGCCACTTGACCG+AGG + chr8_3:16296759-16296778 Msa1279340:intron 55.0%
GAGGACCCTTGGAAGGTTCT+TGG + chr8_3:16298262-16298281 Msa1279340:intron 55.0%
!! AGCACTGACACGCCTAGCAA+CGG - chr8_3:16298298-16298317 None:intergenic 55.0%
TTGCTAGGCGTGTCAGTGCT+GGG + chr8_3:16298298-16298317 Msa1279340:intron 55.0%
GGGCGGTTCAGGCAAAAATG+GGG - chr8_3:16298394-16298413 None:intergenic 55.0%
TTTGCCTGAACCGCCCTTTC+GGG + chr8_3:16298398-16298417 Msa1279340:intron 55.0%
AAAACCCGAAAGGGCGGTTC+AGG - chr8_3:16298405-16298424 None:intergenic 55.0%
TTTGCCTAAGCCGCCCTTTC+GGG + chr8_3:16298511-16298530 Msa1279340:intron 55.0%
AAAACCCGAAAGGGCGGCTT+AGG - chr8_3:16298518-16298537 None:intergenic 55.0%
CTGAGTGCTTGTCTGCCAAG+GGG + chr8_3:16299822-16299841 Msa1279340:intron 55.0%
CACTACGGGTGCATGAGTGT+GGG + chr8_3:16300017-16300036 Msa1279340:intron 55.0%
CAGGAACTGTGAGGGAGAAG+TGG + chr8_3:16300334-16300353 Msa1279340:CDS 55.0%
! TATGGGCTGCCCCATATCGA+TGG + chr8_3:16300372-16300391 Msa1279340:CDS 55.0%
! ATGGGCTGCCCCATATCGAT+GGG + chr8_3:16300373-16300392 Msa1279340:CDS 55.0%
CCCATATCGATGGGGATGCA+TGG + chr8_3:16300382-16300401 Msa1279340:CDS 55.0%
TGCAGGGAGGATTTCCATGG+TGG + chr8_3:16300573-16300592 Msa1279340:CDS 55.0%
GGAGATGTGTGGGTAGCTGT+TGG + chr8_3:16300923-16300942 Msa1279340:CDS 55.0%
AGGCAATTCCTGCTGCCTCA+AGG + chr8_3:16301290-16301309 Msa1279340:intron 55.0%
CTGCTTAAAGGGCAGTGCTC+TGG - chr8_3:16301398-16301417 None:intergenic 55.0%
!! CAGAGCACTGCCCTTTAAGC+AGG + chr8_3:16301396-16301415 Msa1279340:CDS 55.0%
AGCACTGCCCTTTAAGCAGG+AGG + chr8_3:16301399-16301418 Msa1279340:CDS 55.0%
ACCTTGAAGAAGAGGGGGAG+AGG - chr8_3:16301437-16301456 None:intergenic 55.0%
GGATTGAGGCAAGCAACCAG+TGG - chr8_3:16301600-16301619 None:intergenic 55.0%
TAGGGTGGTGAAGGAGGTGG+AGG + chr8_3:16295465-16295484 Msa1279340:intron 60.0%
GGGCTGTGTCACACCACCAA+GGG + chr8_3:16296531-16296550 Msa1279340:intron 60.0%
GGGCTGTGTCACACCACCAA+GGG + chr8_3:16296531-16296550 Msa1279340:intron 60.0%
CAACGACGGTCTCTCCGAAG+AGG - chr8_3:16298197-16298216 None:intergenic 60.0%
GGATACAGGTCGCCGTTGCT+AGG + chr8_3:16298283-16298302 Msa1279340:intron 60.0%
GTTGCTAGGCGTGTCAGTGC+TGG + chr8_3:16298297-16298316 Msa1279340:intron 60.0%
GCACTACGGGTGCATGAGTG+TGG + chr8_3:16300016-16300035 Msa1279340:intron 60.0%
ACAGATATACGGGGAGGGGG+AGG - chr8_3:16300061-16300080 None:intergenic 60.0%
GAGGGAGAAGTGGACCCTGA+AGG + chr8_3:16300344-16300363 Msa1279340:CDS 60.0%
TGGGCTGCCCCATATCGATG+GGG + chr8_3:16300374-16300393 Msa1279340:CDS 60.0%
TGCAGGACTGGGCAGATCTG+TGG + chr8_3:16300539-16300558 Msa1279340:intron 60.0%
AGGACTGGGCAGATCTGTGG+CGG + chr8_3:16300542-16300561 Msa1279340:intron 60.0%
TGTGGCGGCCTGATCTTGCA+GGG + chr8_3:16300557-16300576 Msa1279340:CDS 60.0%
GCCTCTCCCCCTCTTCTTCA+AGG + chr8_3:16301433-16301452 Msa1279340:CDS 60.0%
CGGGCTGTGTCACACCACCA+AGG + chr8_3:16296530-16296549 Msa1279340:intron 65.0%
CGGGCTGTGTCACACCACCA+AGG + chr8_3:16296530-16296549 Msa1279340:intron 65.0%
GATATACGGGGAGGGGGAGG+AGG - chr8_3:16300058-16300077 None:intergenic 65.0%
CTGTGGCGGCCTGATCTTGC+AGG + chr8_3:16300556-16300575 Msa1279340:CDS 65.0%
!! TCGGATTGGTGGGCGCGTCA+GGG + chr8_3:16301324-16301343 Msa1279340:CDS 65.0%
!! GAAGAGGGGGAGAGGCACCT+GGG - chr8_3:16301429-16301448 None:intergenic 65.0%
!! AGAAGAGGGGGAGAGGCACC+TGG - chr8_3:16301430-16301449 None:intergenic 65.0%
GGAGGGGGAGGAGGTGACAC+GGG - chr8_3:16300049-16300068 None:intergenic 70.0%
GGGAGGGGGAGGAGGTGACA+CGG - chr8_3:16300050-16300069 None:intergenic 70.0%
GGCGGCCTGATCTTGCAGGG+AGG + chr8_3:16300560-16300579 Msa1279340:CDS 70.0%
!! GTCGGATTGGTGGGCGCGTC+AGG + chr8_3:16301323-16301342 Msa1279340:CDS 70.0%
!! CGGATTGGTGGGCGCGTCAG+GGG + chr8_3:16301325-16301344 Msa1279340:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 16295353 16302158 16295353 ID=Msa1279340;Name=Msa1279340
chr8_3 mRNA 16295353 16302158 16295353 ID=Msa1279340-mRNA-1;Parent=Msa1279340;Name=Msa1279340-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0.71|0.62|0.75|1|1|8|477|429
chr8_3 exon 16295353 16295358 16295353 ID=Msa1279340-mRNA-1:exon:6386;Parent=Msa1279340-mRNA-1
chr8_3 exon 16298873 16298879 16298873 ID=Msa1279340-mRNA-1:exon:6387;Parent=Msa1279340-mRNA-1
chr8_3 exon 16298981 16299138 16298981 ID=Msa1279340-mRNA-1:exon:6388;Parent=Msa1279340-mRNA-1
chr8_3 exon 16299375 16299623 16299375 ID=Msa1279340-mRNA-1:exon:6389;Parent=Msa1279340-mRNA-1
chr8_3 exon 16300323 16300457 16300323 ID=Msa1279340-mRNA-1:exon:6390;Parent=Msa1279340-mRNA-1
chr8_3 exon 16300544 16300726 16300544 ID=Msa1279340-mRNA-1:exon:6391;Parent=Msa1279340-mRNA-1
chr8_3 exon 16300878 16301039 16300878 ID=Msa1279340-mRNA-1:exon:6392;Parent=Msa1279340-mRNA-1
chr8_3 exon 16301292 16302158 16301292 ID=Msa1279340-mRNA-1:exon:6393;Parent=Msa1279340-mRNA-1
chr8_3 CDS 16295353 16295358 16295353 ID=Msa1279340-mRNA-1:cds;Parent=Msa1279340-mRNA-1
chr8_3 CDS 16298873 16298879 16298873 ID=Msa1279340-mRNA-1:cds;Parent=Msa1279340-mRNA-1
chr8_3 CDS 16298981 16299138 16298981 ID=Msa1279340-mRNA-1:cds;Parent=Msa1279340-mRNA-1
chr8_3 CDS 16299375 16299623 16299375 ID=Msa1279340-mRNA-1:cds;Parent=Msa1279340-mRNA-1
chr8_3 CDS 16300323 16300457 16300323 ID=Msa1279340-mRNA-1:cds;Parent=Msa1279340-mRNA-1
chr8_3 CDS 16300544 16300726 16300544 ID=Msa1279340-mRNA-1:cds;Parent=Msa1279340-mRNA-1
chr8_3 CDS 16300878 16301039 16300878 ID=Msa1279340-mRNA-1:cds;Parent=Msa1279340-mRNA-1
chr8_3 CDS 16301292 16301681 16301292 ID=Msa1279340-mRNA-1:cds;Parent=Msa1279340-mRNA-1
chr8_3 three_prime_UTR 16301682 16302158 16301682 ID=Msa1279340-mRNA-1:three_prime_utr;Parent=Msa1279340-mRNA-1
Gene Sequence

>Msa1279340

ATGGAGTTATCTGATGATAATGATGCAAGGAAACATGATGCCAATGGAAATATAGATGTAGATAAGGAATTAGAAGCATCTTTTAATGCTTGGAAGTCTAAAACGTATGCATTGACAGTTCCTTTGAAAGTTGTTGCTTTGCGTGGCTCTATTCCTCCTTCATGGATCAAGGATTTCATAAATTCTCAAGGGAATAGAATGAAATTTAAGGTGAATTATTATGCAACTCTCGAGAATATCTTCTCTGATCTATCCATTCCCTTTACCAAAGGTGATCATGTCCCAACAACTGCTTTGGCAGCTGATATTGTCGGTATTGGTGACTCGTGGCTCAAATTTTCCGTTAAAAAAGCTATAATTGAGCCAATAAAAGATGTGGAAGGTCAAGAATGGTTTAAAAACTTATCTGAGAAATGGAAGGTATATCTACGCAGGAACTGTGAGGGAGAAGTGGACCCTGAAGGTGATATATGGGCTGCCCCATATCGATGGGGATGCATGGTAATAGCATACAAGACAAATAGTTTTCAAAAGCATAAGTTGGCTCCAATAGAGGACTGGGCAGATCTGTGGCGGCCTGATCTTGCAGGGAGGATTTCCATGGTGGACTCTCCTAGAGAAGTTGTCGGTGCAGTCTTAAAGTATATGGGGGCTTCCTATAATGCAAATGACATCAATTTGGAAGTTAATGGTGGGAGAGATGCTGTTAAACATAATTTAGCATTGCTTGCAAAACAGGTTCGACTATTTGATAGTGAAAACTATCTAAAGGCTTTTGGAGTTGGAGATGTGTGGGTAGCTGTTGGATGGAGTAGTGATATTATTCCTGTTGCTAAACGGATGTCTAATGTTGCAGTTATTGTTCCAAAGTCTGGAGCGAGTTTATGGGCAGATCTTTGGGCAATTCCTGCTGCCTCAAGGATTCAAACAAGTCGGATTGGTGGGCGCGTCAGGGGTCCATCCCCATTAATTCATCAGTGGATAGAGTTTTGTCTGCAATCTGCCAGAGCACTGCCCTTTAAGCAGGAGGTGATCCCAGGTGCCTCTCCCCCTCTTCTTCAAGGTCATTCCACCAATGTGCCTTTGGAGTTAACTAAGGGTAGGCCAAGGCTAGACACCAATCTCATTGATGGAGCACCACCATCTGACATTTTAGAAAGGTGTGAATTTCTAGAGCCATTATCTAATTCCGCAGTATCAGATTACCACTGGTTGCTTGCCTCAATCCAGAAACCTAGCAATGGATTGATACACAAAATGCGTCAGTATATCTCATCATTGGTTACATAG

Protein sequence

>Msa1279340

MELSDDNDARKHDANGNIDVDKELEASFNAWKSKTYALTVPLKVVALRGSIPPSWIKDFINSQGNRMKFKVNYYATLENIFSDLSIPFTKGDHVPTTALAADIVGIGDSWLKFSVKKAIIEPIKDVEGQEWFKNLSEKWKVYLRRNCEGEVDPEGDIWAAPYRWGCMVIAYKTNSFQKHKLAPIEDWADLWRPDLAGRISMVDSPREVVGAVLKYMGASYNANDINLEVNGGRDAVKHNLALLAKQVRLFDSENYLKAFGVGDVWVAVGWSSDIIPVAKRMSNVAVIVPKSGASLWADLWAIPAASRIQTSRIGGRVRGPSPLIHQWIEFCLQSARALPFKQEVIPGASPPLLQGHSTNVPLELTKGRPRLDTNLIDGAPPSDILERCEFLEPLSNSAVSDYHWLLASIQKPSNGLIHKMRQYISSLVT*