Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0339740 | XP_003597378.1 | 97.326 | 187 | 5 | 0 | 1 | 187 | 1 | 187 | 5.44e-127 | 365 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005270 | Msa0339740 | 0.819226 | 1.298180e-52 | -8.615850e-47 |
| Msa0017320 | Msa0339740 | 0.805294 | 1.431143e-49 | -8.615850e-47 |
| Msa0026910 | Msa0339740 | 0.818097 | 2.341817e-52 | -8.615850e-47 |
| Msa0027390 | Msa0339740 | 0.803814 | 2.912937e-49 | -8.615850e-47 |
| Msa0031180 | Msa0339740 | 0.816249 | 6.094388e-52 | -8.615850e-47 |
| Msa0032470 | Msa0339740 | 0.800582 | 1.346800e-48 | -8.615850e-47 |
| Msa0042550 | Msa0339740 | 0.833593 | 4.878617e-56 | -8.615850e-47 |
| Msa0052860 | Msa0339740 | 0.824276 | 8.810555e-54 | -8.615850e-47 |
| Msa0054820 | Msa0339740 | 0.806972 | 6.343511e-50 | -8.615850e-47 |
| Msa0055070 | Msa0339740 | 0.805095 | 1.575227e-49 | -8.615850e-47 |
| Msa0058310 | Msa0339740 | 0.811377 | 7.215960e-51 | -8.615850e-47 |
| Msa0059890 | Msa0339740 | 0.826800 | 2.223887e-54 | -8.615850e-47 |
| Msa0064110 | Msa0339740 | 0.818889 | 1.548539e-52 | -8.615850e-47 |
| Msa0071250 | Msa0339740 | 0.810011 | 1.424983e-50 | -8.615850e-47 |
| Msa0074750 | Msa0339740 | 0.820015 | 8.575540e-53 | -8.615850e-47 |
| Msa0078480 | Msa0339740 | 0.819035 | 1.434319e-52 | -8.615850e-47 |
| Msa0081650 | Msa0339740 | 0.839337 | 1.682995e-57 | -8.615850e-47 |
| Msa0084430 | Msa0339740 | 0.810381 | 1.186048e-50 | -8.615850e-47 |
| Msa0090390 | Msa0339740 | 0.803364 | 3.611803e-49 | -8.615850e-47 |
| Msa0091500 | Msa0339740 | 0.806367 | 8.515507e-50 | -8.615850e-47 |
| Msa0092410 | Msa0339740 | 0.802302 | 5.983135e-49 | -8.615850e-47 |
| Msa0100160 | Msa0339740 | 0.808666 | 2.769082e-50 | -8.615850e-47 |
| Msa0101020 | Msa0339740 | 0.802582 | 5.238494e-49 | -8.615850e-47 |
| Msa0103250 | Msa0339740 | 0.802653 | 5.066138e-49 | -8.615850e-47 |
| Msa0124550 | Msa0339740 | 0.813844 | 2.083314e-51 | -8.615850e-47 |
| Msa0130520 | Msa0339740 | 0.815070 | 1.116283e-51 | -8.615850e-47 |
| Msa0137570 | Msa0339740 | 0.803796 | 2.937649e-49 | -8.615850e-47 |
| Msa0138020 | Msa0339740 | 0.828826 | 7.243946e-55 | -8.615850e-47 |
| Msa0138640 | Msa0339740 | 0.807826 | 4.181420e-50 | -8.615850e-47 |
| Msa0143850 | Msa0339740 | 0.823803 | 1.137949e-53 | -8.615850e-47 |
| Msa0174260 | Msa0339740 | 0.802533 | 5.363402e-49 | -8.615850e-47 |
| Msa0174390 | Msa0339740 | 0.800195 | 1.615087e-48 | -8.615850e-47 |
| Msa0175540 | Msa0339740 | 0.811119 | 8.210689e-51 | -8.615850e-47 |
| Msa0178510 | Msa0339740 | 0.835219 | 1.906405e-56 | -8.615850e-47 |
| Msa0187490 | Msa0339740 | 0.820948 | 5.235660e-53 | -8.615850e-47 |
| Msa0197610 | Msa0339740 | 0.852354 | 4.876899e-61 | -8.615850e-47 |
| Msa0202930 | Msa0339740 | 0.827284 | 1.703140e-54 | -8.615850e-47 |
| Msa0205010 | Msa0339740 | 0.813901 | 2.024140e-51 | -8.615850e-47 |
| Msa0218350 | Msa0339740 | 0.822464 | 2.336225e-53 | -8.615850e-47 |
| Msa0223120 | Msa0339740 | 0.968136 | 2.993354e-128 | -8.615850e-47 |
| Msa0227230 | Msa0339740 | 0.804639 | 1.961228e-49 | -8.615850e-47 |
| Msa0233370 | Msa0339740 | 0.812532 | 4.043699e-51 | -8.615850e-47 |
| Msa0236070 | Msa0339740 | 0.828424 | 9.058111e-55 | -8.615850e-47 |
| Msa0238030 | Msa0339740 | 0.804966 | 1.676298e-49 | -8.615850e-47 |
| Msa0244980 | Msa0339740 | 0.800421 | 1.452840e-48 | -8.615850e-47 |
| Msa0262370 | Msa0339740 | 0.813644 | 2.306410e-51 | -8.615850e-47 |
| Msa0265150 | Msa0339740 | 0.809212 | 2.115512e-50 | -8.615850e-47 |
| Msa0269560 | Msa0339740 | 0.808243 | 3.408285e-50 | -8.615850e-47 |
| Msa0270170 | Msa0339740 | -0.802274 | 6.062392e-49 | -8.615850e-47 |
| Msa0271580 | Msa0339740 | 0.811651 | 6.293628e-51 | -8.615850e-47 |
| Msa0281480 | Msa0339740 | 0.805629 | 1.217409e-49 | -8.615850e-47 |
| Msa0284450 | Msa0339740 | 0.827357 | 1.635731e-54 | -8.615850e-47 |
| Msa0290760 | Msa0339740 | 0.812878 | 3.397159e-51 | -8.615850e-47 |
| Msa0300150 | Msa0339740 | 0.819112 | 1.377638e-52 | -8.615850e-47 |
| Msa0306210 | Msa0339740 | -0.801148 | 1.032438e-48 | -8.615850e-47 |
| Msa0307310 | Msa0339740 | 0.831336 | 1.768707e-55 | -8.615850e-47 |
| Msa0307560 | Msa0339740 | 0.807596 | 4.677983e-50 | -8.615850e-47 |
| Msa0317960 | Msa0339740 | 0.801141 | 1.035511e-48 | -8.615850e-47 |
| Msa0322680 | Msa0339740 | 0.803843 | 2.872784e-49 | -8.615850e-47 |
| Msa0324240 | Msa0339740 | 0.821798 | 3.334241e-53 | -8.615850e-47 |
| Msa0326110 | Msa0339740 | 0.801001 | 1.106089e-48 | -8.615850e-47 |
| Msa0339740 | Msa0339910 | 0.821317 | 4.305961e-53 | -8.615850e-47 |
| Msa0339740 | Msa0347550 | 0.800082 | 1.702525e-48 | -8.615850e-47 |
| Msa0339740 | Msa0347950 | 0.808922 | 2.441001e-50 | -8.615850e-47 |
| Msa0339740 | Msa0347990 | 0.807810 | 4.213644e-50 | -8.615850e-47 |
| Msa0339740 | Msa0376020 | 0.800254 | 1.570830e-48 | -8.615850e-47 |
| Msa0339740 | Msa0378970 | 0.806774 | 6.985737e-50 | -8.615850e-47 |
| Msa0339740 | Msa0381000 | 0.801842 | 7.441004e-49 | -8.615850e-47 |
| Msa0339740 | Msa0387050 | 0.843923 | 1.039474e-58 | -8.615850e-47 |
| Msa0339740 | Msa0397460 | 0.812502 | 4.104612e-51 | -8.615850e-47 |
| Msa0339740 | Msa0417330 | 0.808126 | 3.610245e-50 | -8.615850e-47 |
| Msa0339740 | Msa0421300 | -0.800533 | 1.378272e-48 | -8.615850e-47 |
| Msa0339740 | Msa0422180 | 0.809673 | 1.684858e-50 | -8.615850e-47 |
| Msa0339740 | Msa0430870 | 0.827157 | 1.827140e-54 | -8.615850e-47 |
| Msa0339740 | Msa0430950 | 0.809888 | 1.514398e-50 | -8.615850e-47 |
| Msa0339740 | Msa0435150 | 0.801605 | 8.323292e-49 | -8.615850e-47 |
| Msa0339740 | Msa0435220 | 0.830227 | 3.307472e-55 | -8.615850e-47 |
| Msa0339740 | Msa0442610 | 0.809348 | 1.977854e-50 | -8.615850e-47 |
| Msa0339740 | Msa0468320 | 0.802690 | 4.978299e-49 | -8.615850e-47 |
| Msa0339740 | Msa0471900 | 0.807173 | 5.753228e-50 | -8.615850e-47 |
| Msa0339740 | Msa0474940 | 0.801432 | 9.031213e-49 | -8.615850e-47 |
| Msa0339740 | Msa0482940 | 0.815925 | 7.200543e-52 | -8.615850e-47 |
| Msa0339740 | Msa0484780 | 0.808926 | 2.436454e-50 | -8.615850e-47 |
| Msa0339740 | Msa0485490 | 0.845524 | 3.849131e-59 | -8.615850e-47 |
| Msa0339740 | Msa0506830 | 0.809336 | 1.989988e-50 | -8.615850e-47 |
| Msa0339740 | Msa0514610 | 0.821062 | 4.929740e-53 | -8.615850e-47 |
| Msa0339740 | Msa0516020 | 0.801784 | 7.648019e-49 | -8.615850e-47 |
| Msa0339740 | Msa0517640 | 0.805565 | 1.255397e-49 | -8.615850e-47 |
| Msa0339740 | Msa0518440 | 0.827269 | 1.717426e-54 | -8.615850e-47 |
| Msa0339740 | Msa0523910 | 0.810334 | 1.213885e-50 | -8.615850e-47 |
| Msa0339740 | Msa0530650 | 0.820529 | 6.536464e-53 | -8.615850e-47 |
| Msa0339740 | Msa0532980 | 0.804146 | 2.485081e-49 | -8.615850e-47 |
| Msa0339740 | Msa0537770 | 0.810590 | 1.068881e-50 | -8.615850e-47 |
| Msa0339740 | Msa0541260 | 0.820263 | 7.521569e-53 | -8.615850e-47 |
| Msa0339740 | Msa0546570 | 0.819968 | 8.789078e-53 | -8.615850e-47 |
| Msa0339740 | Msa0555640 | 0.800217 | 1.598277e-48 | -8.615850e-47 |
| Msa0339740 | Msa0556860 | 0.801992 | 6.930799e-49 | -8.615850e-47 |
| Msa0339740 | Msa0566350 | 0.819255 | 1.278424e-52 | -8.615850e-47 |
| Msa0339740 | Msa0566750 | 0.818582 | 1.817746e-52 | -8.615850e-47 |
| Msa0339740 | Msa0576680 | 0.803610 | 3.211895e-49 | -8.615850e-47 |
| Msa0339740 | Msa0584550 | 0.800980 | 1.117201e-48 | -8.615850e-47 |
| Msa0339740 | Msa0587190 | 0.830381 | 3.033222e-55 | -8.615850e-47 |
| Msa0339740 | Msa0588090 | 0.803324 | 3.680195e-49 | -8.615850e-47 |
| Msa0339740 | Msa0600080 | 0.802903 | 4.497638e-49 | -8.615850e-47 |
| Msa0339740 | Msa0618950 | 0.820330 | 7.261150e-53 | -8.615850e-47 |
| Msa0339740 | Msa0618970 | 0.807053 | 6.098775e-50 | -8.615850e-47 |
| Msa0339740 | Msa0620330 | 0.838589 | 2.629047e-57 | -8.615850e-47 |
| Msa0339740 | Msa0620620 | 0.800383 | 1.478862e-48 | -8.615850e-47 |
| Msa0339740 | Msa0626990 | 0.827553 | 1.467895e-54 | -8.615850e-47 |
| Msa0339740 | Msa0627350 | 0.825568 | 4.367234e-54 | -8.615850e-47 |
| Msa0339740 | Msa0641340 | 0.808741 | 2.667896e-50 | -8.615850e-47 |
| Msa0339740 | Msa0641730 | 0.809539 | 1.800094e-50 | -8.615850e-47 |
| Msa0339740 | Msa0651270 | 0.805852 | 1.093037e-49 | -8.615850e-47 |
| Msa0339740 | Msa0679550 | 0.837177 | 6.063914e-57 | -8.615850e-47 |
| Msa0339740 | Msa0680480 | 0.823230 | 1.549236e-53 | -8.615850e-47 |
| Msa0339740 | Msa0682090 | 0.806388 | 8.427601e-50 | -8.615850e-47 |
| Msa0339740 | Msa0682140 | 0.803591 | 3.241064e-49 | -8.615850e-47 |
| Msa0339740 | Msa0693380 | 0.804343 | 2.260479e-49 | -8.615850e-47 |
| Msa0339740 | Msa0705190 | 0.811103 | 8.278131e-51 | -8.615850e-47 |
| Msa0339740 | Msa0705990 | 0.808862 | 2.514583e-50 | -8.615850e-47 |
| Msa0339740 | Msa0709160 | 0.831063 | 2.063970e-55 | -8.615850e-47 |
| Msa0339740 | Msa0715410 | 0.830434 | 2.942918e-55 | -8.615850e-47 |
| Msa0339740 | Msa0716960 | 0.816526 | 5.283725e-52 | -8.615850e-47 |
| Msa0339740 | Msa0717010 | 0.810694 | 1.014563e-50 | -8.615850e-47 |
| Msa0339740 | Msa0721280 | 0.808754 | 2.651590e-50 | -8.615850e-47 |
| Msa0339740 | Msa0721340 | 0.824345 | 8.487175e-54 | -8.615850e-47 |
| Msa0339740 | Msa0726080 | 0.812065 | 5.113319e-51 | -8.615850e-47 |
| Msa0339740 | Msa0732600 | 0.822674 | 2.087312e-53 | -8.615850e-47 |
| Msa0339740 | Msa0736570 | 0.809496 | 1.838701e-50 | -8.615850e-47 |
| Msa0339740 | Msa0741070 | 0.833554 | 4.988670e-56 | -8.615850e-47 |
| Msa0339740 | Msa0742390 | 0.827499 | 1.512937e-54 | -8.615850e-47 |
| Msa0339740 | Msa0743530 | 0.803955 | 2.722496e-49 | -8.615850e-47 |
| Msa0339740 | Msa0749440 | 0.819317 | 1.237628e-52 | -8.615850e-47 |
| Msa0339740 | Msa0750950 | 0.802613 | 5.163696e-49 | -8.615850e-47 |
| Msa0339740 | Msa0751850 | 0.805136 | 1.543936e-49 | -8.615850e-47 |
| Msa0339740 | Msa0760350 | 0.805880 | 1.077942e-49 | -8.615850e-47 |
| Msa0339740 | Msa0773590 | 0.805833 | 1.103065e-49 | -8.615850e-47 |
| Msa0339740 | Msa0780280 | 0.805524 | 1.280751e-49 | -8.615850e-47 |
| Msa0339740 | Msa0787150 | 0.812943 | 3.286419e-51 | -8.615850e-47 |
| Msa0339740 | Msa0788110 | 0.810610 | 1.058043e-50 | -8.615850e-47 |
| Msa0339740 | Msa0797250 | 0.807782 | 4.271285e-50 | -8.615850e-47 |
| Msa0339740 | Msa0801730 | 0.822598 | 2.173906e-53 | -8.615850e-47 |
| Msa0339740 | Msa0809140 | 0.800917 | 1.150833e-48 | -8.615850e-47 |
| Msa0339740 | Msa0811040 | 0.809141 | 2.190499e-50 | -8.615850e-47 |
| Msa0339740 | Msa0821800 | 0.821799 | 3.332000e-53 | -8.615850e-47 |
| Msa0339740 | Msa0823500 | 0.813120 | 3.006096e-51 | -8.615850e-47 |
| Msa0339740 | Msa0831150 | 0.828323 | 9.585367e-55 | -8.615850e-47 |
| Msa0339740 | Msa0831850 | 0.801898 | 7.243848e-49 | -8.615850e-47 |
| Msa0339740 | Msa0832090 | 0.804060 | 2.589280e-49 | -8.615850e-47 |
| Msa0339740 | Msa0832150 | 0.801345 | 9.409775e-49 | -8.615850e-47 |
| Msa0339740 | Msa0837780 | 0.805861 | 1.088111e-49 | -8.615850e-47 |
| Msa0339740 | Msa0844110 | 0.823388 | 1.423223e-53 | -8.615850e-47 |
| Msa0339740 | Msa0844230 | 0.814562 | 1.446520e-51 | -8.615850e-47 |
| Msa0339740 | Msa0845070 | 0.812237 | 4.691071e-51 | -8.615850e-47 |
| Msa0339740 | Msa0846230 | 0.812656 | 3.799574e-51 | -8.615850e-47 |
| Msa0339740 | Msa0847470 | 0.838017 | 3.690748e-57 | -8.615850e-47 |
| Msa0339740 | Msa0861830 | 0.808807 | 2.583029e-50 | -8.615850e-47 |
| Msa0339740 | Msa0862500 | 0.814475 | 1.511711e-51 | -8.615850e-47 |
| Msa0339740 | Msa0866400 | 0.815001 | 1.156276e-51 | -8.615850e-47 |
| Msa0339740 | Msa0873860 | 0.816294 | 5.957367e-52 | -8.615850e-47 |
| Msa0339740 | Msa0877710 | 0.822774 | 1.978422e-53 | -8.615850e-47 |
| Msa0339740 | Msa0899350 | 0.806002 | 1.016193e-49 | -8.615850e-47 |
| Msa0339740 | Msa0901320 | 0.803437 | 3.488228e-49 | -8.615850e-47 |
| Msa0339740 | Msa0902830 | 0.816593 | 5.106355e-52 | -8.615850e-47 |
| Msa0339740 | Msa0936390 | 0.822953 | 1.797135e-53 | -8.615850e-47 |
| Msa0339740 | Msa0939000 | 0.814494 | 1.497207e-51 | -8.615850e-47 |
| Msa0339740 | Msa0945120 | 0.804157 | 2.471529e-49 | -8.615850e-47 |
| Msa0339740 | Msa0962840 | 0.806672 | 7.342564e-50 | -8.615850e-47 |
| Msa0339740 | Msa0965020 | 0.822146 | 2.769296e-53 | -8.615850e-47 |
| Msa0339740 | Msa0965370 | 0.800298 | 1.538959e-48 | -8.615850e-47 |
| Msa0339740 | Msa0975940 | 0.809300 | 2.025249e-50 | -8.615850e-47 |
| Msa0339740 | Msa0980020 | 0.804808 | 1.808113e-49 | -8.615850e-47 |
| Msa0339740 | Msa0990580 | 0.811466 | 6.904166e-51 | -8.615850e-47 |
| Msa0339740 | Msa0992600 | 0.815188 | 1.050593e-51 | -8.615850e-47 |
| Msa0339740 | Msa0994370 | 0.807488 | 4.932033e-50 | -8.615850e-47 |
| Msa0339740 | Msa1031820 | 0.819056 | 1.418800e-52 | -8.615850e-47 |
| Msa0339740 | Msa1032170 | 0.815187 | 1.051378e-51 | -8.615850e-47 |
| Msa0339740 | Msa1039760 | 0.815649 | 8.298075e-52 | -8.615850e-47 |
| Msa0339740 | Msa1063420 | 0.834827 | 2.392462e-56 | -8.615850e-47 |
| Msa0339740 | Msa1063690 | 0.809158 | 2.172244e-50 | -8.615850e-47 |
| Msa0339740 | Msa1077070 | 0.841094 | 5.853654e-58 | -8.615850e-47 |
| Msa0339740 | Msa1077340 | 0.874979 | 4.421036e-68 | -8.615850e-47 |
| Msa0339740 | Msa1081790 | -0.809700 | 1.661868e-50 | -8.615850e-47 |
| Msa0339740 | Msa1096060 | 0.827536 | 1.481623e-54 | -8.615850e-47 |
| Msa0339740 | Msa1098890 | 0.804122 | 2.513200e-49 | -8.615850e-47 |
| Msa0339740 | Msa1105190 | 0.800947 | 1.134618e-48 | -8.615850e-47 |
| Msa0339740 | Msa1115280 | 0.838171 | 3.368436e-57 | -8.615850e-47 |
| Msa0339740 | Msa1122780 | 0.837443 | 5.182090e-57 | -8.615850e-47 |
| Msa0339740 | Msa1128330 | 0.805452 | 1.326014e-49 | -8.615850e-47 |
| Msa0339740 | Msa1130530 | 0.838993 | 2.067222e-57 | -8.615850e-47 |
| Msa0339740 | Msa1132390 | 0.803859 | 2.850331e-49 | -8.615850e-47 |
| Msa0339740 | Msa1143020 | 0.811905 | 5.541432e-51 | -8.615850e-47 |
| Msa0339740 | Msa1164020 | 0.801358 | 9.348385e-49 | -8.615850e-47 |
| Msa0339740 | Msa1176270 | 0.829237 | 5.758848e-55 | -8.615850e-47 |
| Msa0339740 | Msa1178050 | 0.807314 | 5.370333e-50 | -8.615850e-47 |
| Msa0339740 | Msa1207310 | 0.835828 | 1.336845e-56 | -8.615850e-47 |
| Msa0339740 | Msa1207350 | 0.817123 | 3.881467e-52 | -8.615850e-47 |
| Msa0339740 | Msa1225600 | 0.811280 | 7.575399e-51 | -8.615850e-47 |
| Msa0339740 | Msa1230040 | 0.803548 | 3.308151e-49 | -8.615850e-47 |
| Msa0339740 | Msa1250290 | 0.820071 | 8.322730e-53 | -8.615850e-47 |
| Msa0339740 | Msa1263290 | -0.805572 | 1.251427e-49 | -8.615850e-47 |
| Msa0339740 | Msa1270660 | 0.831367 | 1.737482e-55 | -8.615850e-47 |
| Msa0339740 | Msa1270730 | 0.821090 | 4.856936e-53 | -8.615850e-47 |
| Msa0339740 | Msa1276340 | 0.827725 | 1.334962e-54 | -8.615850e-47 |
| Msa0339740 | Msa1276440 | 0.817093 | 3.942751e-52 | -8.615850e-47 |
| Msa0339740 | Msa1293590 | 0.823650 | 1.235613e-53 | -8.615850e-47 |
| Msa0339740 | Msa1307550 | 0.821795 | 3.339130e-53 | -8.615850e-47 |
| Msa0339740 | Msa1314770 | 0.802331 | 5.901371e-49 | -8.615850e-47 |
| Msa0339740 | Msa1331240 | 0.800808 | 1.211563e-48 | -8.615850e-47 |
| Msa0339740 | Msa1331320 | 0.811351 | 7.312562e-51 | -8.615850e-47 |
| Msa0339740 | Msa1331350 | 0.818103 | 2.334136e-52 | -8.615850e-47 |
| Msa0339740 | Msa1332050 | 0.806718 | 7.180492e-50 | -8.615850e-47 |
| Msa0339740 | Msa1335710 | 0.815795 | 7.697604e-52 | -8.615850e-47 |
| Msa0339740 | Msa1336040 | 0.814860 | 1.242347e-51 | -8.615850e-47 |
| Msa0339740 | Msa1339190 | 0.819711 | 1.006397e-52 | -8.615850e-47 |
| Msa0339740 | Msa1340810 | 0.813163 | 2.941639e-51 | -8.615850e-47 |
| Msa0339740 | Msa1340830 | 0.823136 | 1.628967e-53 | -8.615850e-47 |
| Msa0339740 | Msa1341490 | 0.851212 | 1.027873e-60 | -8.615850e-47 |
| Msa0339740 | Msa1357890 | 0.809628 | 1.722307e-50 | -8.615850e-47 |
| Msa0339740 | Msa1359560 | 0.802028 | 6.811796e-49 | -8.615850e-47 |
| Msa0339740 | Msa1362400 | 0.815154 | 1.069000e-51 | -8.615850e-47 |
| Msa0339740 | Msa1370590 | 0.812883 | 3.388520e-51 | -8.615850e-47 |
| Msa0339740 | Msa1371240 | 0.848072 | 7.738374e-60 | -8.615850e-47 |
| Msa0339740 | Msa1371940 | 0.818658 | 1.747260e-52 | -8.615850e-47 |
| Msa0339740 | Msa1372150 | 0.825278 | 5.113700e-54 | -8.615850e-47 |
| Msa0339740 | Msa1376130 | 0.817511 | 3.174768e-52 | -8.615850e-47 |
| Msa0339740 | Msa1377570 | 0.815839 | 7.525010e-52 | -8.615850e-47 |
| Msa0339740 | Msa1382790 | 0.807264 | 5.503235e-50 | -8.615850e-47 |
| Msa0339740 | Msa1384100 | 0.815630 | 8.379027e-52 | -8.615850e-47 |
| Msa0339740 | Msa1388860 | 0.811767 | 5.936976e-51 | -8.615850e-47 |
| Msa0339740 | Msa1398090 | 0.800820 | 1.204792e-48 | -8.615850e-47 |
| Msa0339740 | Msa1403890 | 0.801905 | 7.222634e-49 | -8.615850e-47 |
| Msa0339740 | Msa1406110 | -0.802100 | 6.583746e-49 | -8.615850e-47 |
| Msa0339740 | Msa1407190 | 0.836545 | 8.788832e-57 | -8.615850e-47 |
| Msa0339740 | Msa1416260 | 0.810348 | 1.205542e-50 | -8.615850e-47 |
| Msa0339740 | Msa1422840 | 0.811964 | 5.379665e-51 | -8.615850e-47 |
| Msa0339740 | Msa1426570 | 0.830842 | 2.337872e-55 | -8.615850e-47 |
| Msa0339740 | Msa1428780 | 0.801346 | 9.403052e-49 | -8.615850e-47 |
| Msa0339740 | Msa1432130 | 0.829536 | 4.871578e-55 | -8.615850e-47 |
| Msa0339740 | Msa1436600 | 0.800740 | 1.250488e-48 | -8.615850e-47 |
| Msa0339740 | Msa1442790 | 0.831061 | 2.066612e-55 | -8.615850e-47 |
| Msa0339740 | Msa1443610 | 0.807608 | 4.651014e-50 | -8.615850e-47 |
| Msa0339740 | Msa1444120 | 0.818392 | 2.007812e-52 | -8.615850e-47 |
| Msa0339740 | Msa1444260 | 0.813765 | 2.169038e-51 | -8.615850e-47 |
| Msa0339740 | Msa1446080 | 0.812088 | 5.055347e-51 | -8.615850e-47 |
| Msa0339740 | Msa1448490 | 0.808541 | 2.944526e-50 | -8.615850e-47 |
| Msa0339740 | Msa1462930 | 0.813815 | 2.114260e-51 | -8.615850e-47 |
| Msa0339740 | Msa1463600 | 0.811530 | 6.684357e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0339740 | MtrunA17_Chr2g0328441 | 97.326 | 187 | 5 | 0 | 1 | 187 | 1 | 187 | 5.01e-131 | 365 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0339740 | AT5G59460.1 | 46.154 | 182 | 78 | 6 | 1 | 179 | 1 | 165 | 9.24e-36 | 123 |
| Msa0339740 | AT5G59460.2 | 57.831 | 83 | 33 | 1 | 1 | 83 | 1 | 81 | 3.67e-26 | 97.4 |
Find 43 sgRNAs with CRISPR-Local
Find 135 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCCAACAATTTCTAGAAAA+TGG | 0.228195 | 2_4:-61003635 | Msa0339740:intron |
| TCTGTATTTGTGGTTCTATT+AGG | 0.278167 | 2_4:-61001125 | Msa0339740:three_prime_UTR |
| CCCCGTCCTGGAGCATTTAA+AGG | 0.280597 | 2_4:-61001902 | Msa0339740:CDS |
| AGTGAGGAGTGTAATTTAAA+AGG | 0.304020 | 2_4:-61001073 | Msa0339740:three_prime_UTR |
| ATTACTAGAAATGCTAGTTT+TGG | 0.306488 | 2_4:+61001699 | None:intergenic |
| GTCAAGCATGATGTTAGTTT+TGG | 0.309266 | 2_4:-61003663 | Msa0339740:CDS |
| CCGCGTTCACAAATCAGATT+TGG | 0.349528 | 2_4:-61004007 | None:intergenic |
| ATCATCGCCGAACAATGGTT+TGG | 0.369184 | 2_4:-61001297 | Msa0339740:CDS |
| AGGTTAATGGAAATGGTAAA+AGG | 0.371437 | 2_4:-61001388 | Msa0339740:CDS |
| TAAACAAATTAAGCTAGGTT+TGG | 0.384147 | 2_4:-61001175 | Msa0339740:three_prime_UTR |
| ACCTTTAAATGCTCCAGGAC+GGG | 0.395840 | 2_4:+61001901 | None:intergenic |
| TTGTTCCCTTGATCATTGTT+TGG | 0.402209 | 2_4:+61001323 | None:intergenic |
| AGGAACTAGGTTAAGGTTGT+TGG | 0.409007 | 2_4:-61003984 | Msa0339740:five_prime_UTR |
| TCATTGTTTGGTGATTTGTT+AGG | 0.413961 | 2_4:+61001335 | None:intergenic |
| AGTTATGAGGTTAATGGAAA+TGG | 0.420080 | 2_4:-61001395 | Msa0339740:CDS |
| TCATCGCCGAACAATGGTTT+GGG | 0.420942 | 2_4:-61001296 | Msa0339740:CDS |
| CGTCTGGAGACAAGCTAGAC+TGG | 0.429068 | 2_4:-61001259 | Msa0339740:CDS |
| GATTTGGAGGAACTAGGTTA+AGG | 0.440005 | 2_4:-61003991 | Msa0339740:five_prime_UTR |
| AATTTAAAAGGTAAAGTGTA+AGG | 0.445030 | 2_4:-61001061 | Msa0339740:three_prime_UTR |
| AAAGAACCCAAACCATTGTT+CGG | 0.446315 | 2_4:+61001290 | None:intergenic |
| TAACTCTTCAGCAGAAGGTT+CGG | 0.461542 | 2_4:-61001441 | Msa0339740:CDS |
| GTGGAAGGTGATCCCCGTCC+TGG | 0.465496 | 2_4:-61001914 | Msa0339740:CDS |
| AAATCACCAAACAATGATCA+AGG | 0.473290 | 2_4:-61001329 | Msa0339740:CDS |
| AAAATGCAAATGTGTCTGTT+AGG | 0.477260 | 2_4:-61001675 | Msa0339740:intron |
| TTTCTTAAACAAATTAAGCT+AGG | 0.484033 | 2_4:-61001180 | Msa0339740:three_prime_UTR |
| GGTTGAGAAAGTAGAAGAAG+AGG | 0.492676 | 2_4:-61003685 | Msa0339740:CDS |
| AAATACAGACATAAAAGCTC+AGG | 0.507823 | 2_4:+61001139 | None:intergenic |
| TTCAAACTCACGTCAACAGT+TGG | 0.508593 | 2_4:+61001854 | None:intergenic |
| CCTTTAAATGCTCCAGGACG+GGG | 0.512790 | 2_4:+61001902 | None:intergenic |
| GAAAATAACTCTTCAGCAGA+AGG | 0.521915 | 2_4:-61001446 | Msa0339740:CDS |
| AAATCAGATTTGGAGGAACT+AGG | 0.524379 | 2_4:-61003997 | None:intergenic |
| AGCAGCTGCAAGAGAAGAGA+AGG | 0.531266 | 2_4:-61003706 | Msa0339740:CDS |
| CGTTCACAAATCAGATTTGG+AGG | 0.543222 | 2_4:-61004004 | None:intergenic |
| ATTCGACCTTTAAATGCTCC+AGG | 0.549316 | 2_4:+61001896 | None:intergenic |
| GCCTTTGTAGAAATTAAATG+AGG | 0.551548 | 2_4:-61001749 | Msa0339740:intron |
| CAGTCTAGCTTGTCTCCAGA+CGG | 0.552079 | 2_4:+61001260 | None:intergenic |
| GACCTTTAAATGCTCCAGGA+CGG | 0.557661 | 2_4:+61001900 | None:intergenic |
| TATATGTAGTGTGGTCATAG+TGG | 0.558579 | 2_4:-61001933 | Msa0339740:intron |
| AATCTGAAAGCAACTTACAA+TGG | 0.601743 | 2_4:-61003929 | Msa0339740:exon |
| GATTTGACTTCTCTAAAGTG+AGG | 0.630336 | 2_4:-61001089 | Msa0339740:three_prime_UTR |
| AATCACCAAACAATGATCAA+GGG | 0.631099 | 2_4:-61001328 | Msa0339740:CDS |
| AATACAGACATAAAAGCTCA+GGG | 0.661578 | 2_4:+61001140 | None:intergenic |
| TGTAGTGTGGTCATAGTGGA+AGG | 0.671991 | 2_4:-61001929 | Msa0339740:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTTTTTAATGCATA+TGG | - | chr2_4:61001335-61001354 | Msa0339740:CDS | 10.0% |
| !!! | TTTTATTTTTTAATGCATAT+GGG | - | chr2_4:61001336-61001355 | Msa0339740:CDS | 10.0% |
| !! | ATGAAAATTTGAATTTATCT+TGG | - | chr2_4:61001469-61001488 | Msa0339740:intron | 15.0% |
| !! | AAAGATTTGTCAAATATATA+GGG | + | chr2_4:61002814-61002833 | None:intergenic | 15.0% |
| !!! | TGCTATTTTATAATGTAAAA+AGG | + | chr2_4:61002838-61002857 | None:intergenic | 15.0% |
| !! | AAAATCAACAATAACGATTT+GGG | + | chr2_4:61001064-61001083 | None:intergenic | 20.0% |
| !! | AAAAATCAACAATAACGATT+TGG | + | chr2_4:61001065-61001084 | None:intergenic | 20.0% |
| !!! | TTCTTTGTTTTCTTTTCTTT+TGG | - | chr2_4:61001163-61001182 | Msa0339740:three_prime_UTR | 20.0% |
| !! | CATATTAGAATTGAAATTCA+CGG | - | chr2_4:61001406-61001425 | Msa0339740:CDS | 20.0% |
| !! | AAAATCTGTAAATTGATATC+GGG | + | chr2_4:61002073-61002092 | None:intergenic | 20.0% |
| !! | CAAAATCTGTAAATTGATAT+CGG | + | chr2_4:61002074-61002093 | None:intergenic | 20.0% |
| !! | TTGTATTTGTTCAAAAATAG+CGG | - | chr2_4:61002236-61002255 | Msa0339740:intron | 20.0% |
| !! | TCTCAATATACAAATTTCTA+TGG | - | chr2_4:61002485-61002504 | Msa0339740:intron | 20.0% |
| !!! | GGTTTTTCAATTAATTAGTA+AGG | - | chr2_4:61002700-61002719 | Msa0339740:intron | 20.0% |
| !! | CAAAGATTTGTCAAATATAT+AGG | + | chr2_4:61002815-61002834 | None:intergenic | 20.0% |
| !! | TTACTTTCTAATATACTTCA+TGG | - | chr2_4:61003350-61003369 | Msa0339740:intron | 20.0% |
| !! | AAGTATTTGCAATATTTGTA+TGG | + | chr2_4:61003397-61003416 | None:intergenic | 20.0% |
| !! | TTTCTTAAACAAATTAAGCT+AGG | - | chr2_4:61003733-61003752 | Msa0339740:intron | 20.0% |
| !! | AATTTAAAAGGTAAAGTGTA+AGG | - | chr2_4:61003852-61003871 | Msa0339740:intron | 20.0% |
| !!! | TTTCATTTTTTCAACATCTA+AGG | - | chr2_4:61003913-61003932 | Msa0339740:CDS | 20.0% |
| !!! | TTCATTTTTTCAACATCTAA+GGG | - | chr2_4:61003914-61003933 | Msa0339740:exon | 20.0% |
| !!! | GTTGATTTTTTTTTGTTCTG+AGG | - | chr2_4:61001075-61001094 | Msa0339740:three_prime_UTR | 25.0% |
| ! | CAAACTTGAATCAATCAATA+GGG | + | chr2_4:61001109-61001128 | None:intergenic | 25.0% |
| ! | TCAAACTTGAATCAATCAAT+AGG | + | chr2_4:61001110-61001129 | None:intergenic | 25.0% |
| !!! | ACCATTTTCTAGAAATTGTT+GGG | + | chr2_4:61001282-61001301 | None:intergenic | 25.0% |
| !!! | TACCATTTTCTAGAAATTGT+TGG | + | chr2_4:61001283-61001302 | None:intergenic | 25.0% |
| ! | TTAATGTTGACAATTTCAAG+AGG | + | chr2_4:61001548-61001567 | None:intergenic | 25.0% |
| ! | ATTGTCAAATACCATCTATA+TGG | - | chr2_4:61002103-61002122 | Msa0339740:intron | 25.0% |
| ! | ATATTGCAAAAAATACTGGT+TGG | + | chr2_4:61002365-61002384 | None:intergenic | 25.0% |
| ! | TCGAATATTGCAAAAAATAC+TGG | + | chr2_4:61002369-61002388 | None:intergenic | 25.0% |
| !!! | TTGATTTGTTTTCTATCTCA+CGG | - | chr2_4:61002948-61002967 | Msa0339740:intron | 25.0% |
| !! | ATTTAATTTCTACAAAGGCA+AGG | + | chr2_4:61003163-61003182 | None:intergenic | 25.0% |
| !! | TCCTCATTTAATTTCTACAA+AGG | + | chr2_4:61003168-61003187 | None:intergenic | 25.0% |
| !!! | ATTACTAGAAATGCTAGTTT+TGG | + | chr2_4:61003217-61003236 | None:intergenic | 25.0% |
| ! | AAAAAGAGTTATGAGGTTAA+TGG | - | chr2_4:61003512-61003531 | Msa0339740:intron | 25.0% |
| ! | TAAACAAATTAAGCTAGGTT+TGG | - | chr2_4:61003738-61003757 | Msa0339740:intron | 25.0% |
| !!! | ATTTCTTTTTCGACATCTAA+AGG | - | chr2_4:61003883-61003902 | Msa0339740:intron | 25.0% |
| AATCTGAAAGCAACTTACAA+TGG | - | chr2_4:61000984-61001003 | Msa0339740:three_prime_UTR | 30.0% | |
| !! | CCATTTTCTAGAAATTGTTG+GGG | + | chr2_4:61001281-61001300 | None:intergenic | 30.0% |
| TTATCAGTGTTGTCAAATAG+TGG | - | chr2_4:61001577-61001596 | Msa0339740:intron | 30.0% | |
| TTGTCAAATAGTGGCTATAA+CGG | - | chr2_4:61001586-61001605 | Msa0339740:intron | 30.0% | |
| ! | TTGGATTTGTTCCCAAATAA+CGG | - | chr2_4:61001625-61001644 | Msa0339740:intron | 30.0% |
| ATTCAAATTCTGCTATGCTA+TGG | - | chr2_4:61001806-61001825 | Msa0339740:intron | 30.0% | |
| ACTTTACTGTTGTCAAATAG+CGG | - | chr2_4:61002195-61002214 | Msa0339740:intron | 30.0% | |
| ! | ATTGCTGTTAACTGAAAGAT+TGG | - | chr2_4:61002679-61002698 | Msa0339740:intron | 30.0% |
| AGGAATTATTGGTGGAATAT+GGG | - | chr2_4:61002760-61002779 | Msa0339740:intron | 30.0% | |
| GCACAAGATATAAAGAAAAC+AGG | + | chr2_4:61003102-61003121 | None:intergenic | 30.0% | |
| GCCTTTGTAGAAATTAAATG+AGG | - | chr2_4:61003164-61003183 | Msa0339740:intron | 30.0% | |
| AAAATGCAAATGTGTCTGTT+AGG | - | chr2_4:61003238-61003257 | Msa0339740:intron | 30.0% | |
| ! | CAGATATCTAATTTGCAGTT+TGG | + | chr2_4:61003277-61003296 | None:intergenic | 30.0% |
| !!! | TTTGTTCTTTTTTTCCTCCA+AGG | - | chr2_4:61003299-61003318 | Msa0339740:intron | 30.0% |
| !!! | TTGTTCTTTTTTTCCTCCAA+GGG | - | chr2_4:61003300-61003319 | Msa0339740:intron | 30.0% |
| AGTTATGAGGTTAATGGAAA+TGG | - | chr2_4:61003518-61003537 | Msa0339740:intron | 30.0% | |
| AGGTTAATGGAAATGGTAAA+AGG | - | chr2_4:61003525-61003544 | Msa0339740:intron | 30.0% | |
| !! | TCATTGTTTGGTGATTTGTT+AGG | + | chr2_4:61003581-61003600 | None:intergenic | 30.0% |
| AAATCACCAAACAATGATCA+AGG | - | chr2_4:61003584-61003603 | Msa0339740:intron | 30.0% | |
| AATCACCAAACAATGATCAA+GGG | - | chr2_4:61003585-61003604 | Msa0339740:intron | 30.0% | |
| AATACAGACATAAAAGCTCA+GGG | + | chr2_4:61003776-61003795 | None:intergenic | 30.0% | |
| AAATACAGACATAAAAGCTC+AGG | + | chr2_4:61003777-61003796 | None:intergenic | 30.0% | |
| ! | AGCTTTTATGTCTGTATTTG+TGG | - | chr2_4:61003778-61003797 | Msa0339740:intron | 30.0% |
| ! | TCTGTATTTGTGGTTCTATT+AGG | - | chr2_4:61003788-61003807 | Msa0339740:intron | 30.0% |
| ! | AGTGAGGAGTGTAATTTAAA+AGG | - | chr2_4:61003840-61003859 | Msa0339740:intron | 30.0% |
| !!! | AAGCGTTTTGAAGAACTTGA+AGG | - | chr2_4:61001023-61001042 | Msa0339740:three_prime_UTR | 35.0% |
| ! | CAACAATAACGATTTGGGTT+TGG | + | chr2_4:61001059-61001078 | None:intergenic | 35.0% |
| !! | GTCAAGCATGATGTTAGTTT+TGG | - | chr2_4:61001250-61001269 | Msa0339740:CDS | 35.0% |
| ! | CCCCAACAATTTCTAGAAAA+TGG | - | chr2_4:61001278-61001297 | Msa0339740:CDS | 35.0% |
| CATCAGTCATTGCTCAAAAT+TGG | + | chr2_4:61001384-61001403 | None:intergenic | 35.0% | |
| ! | GTCTTCTGTGGATTTGAAAT+TGG | - | chr2_4:61001428-61001447 | Msa0339740:CDS | 35.0% |
| !! | ATCTTGGTGTTGTCAAATAG+TGG | - | chr2_4:61001485-61001504 | Msa0339740:intron | 35.0% |
| TTACGCTATAGCCGTTATTT+GGG | + | chr2_4:61001639-61001658 | None:intergenic | 35.0% | |
| TGAACCAGTGTTATCAATTG+CGG | - | chr2_4:61001666-61001685 | Msa0339740:intron | 35.0% | |
| ! | TTGTACTAAATCGCTGATTG+TGG | - | chr2_4:61001769-61001788 | Msa0339740:intron | 35.0% |
| CTTAATGTGACAAGTTTGAG+AGG | + | chr2_4:61002166-61002185 | None:intergenic | 35.0% | |
| TGGTATCCAGTATTGCTTAT+AGG | - | chr2_4:61002583-61002602 | Msa0339740:intron | 35.0% | |
| TCAAACTCTGAACTTTGAAC+AGG | + | chr2_4:61002612-61002631 | None:intergenic | 35.0% | |
| TGAATTTCTGAATTGCGAGA+TGG | - | chr2_4:61002732-61002751 | Msa0339740:intron | 35.0% | |
| CAGGAATTATTGGTGGAATA+TGG | - | chr2_4:61002759-61002778 | Msa0339740:intron | 35.0% | |
| CTTTCGACATATATGTAGTG+TGG | - | chr2_4:61002971-61002990 | Msa0339740:intron | 35.0% | |
| TATATGTAGTGTGGTCATAG+TGG | - | chr2_4:61002980-61002999 | Msa0339740:intron | 35.0% | |
| AAGGCTACAGCATTAGAATT+CGG | + | chr2_4:61003144-61003163 | None:intergenic | 35.0% | |
| !!! | AGAAATGCTAGTTTTGGCTA+CGG | + | chr2_4:61003211-61003230 | None:intergenic | 35.0% |
| GAAAATAACTCTTCAGCAGA+AGG | - | chr2_4:61003467-61003486 | Msa0339740:intron | 35.0% | |
| CGTGAACAAAAAGAGTTATG+AGG | - | chr2_4:61003505-61003524 | Msa0339740:intron | 35.0% | |
| TTGTTCCCTTGATCATTGTT+TGG | + | chr2_4:61003593-61003612 | None:intergenic | 35.0% | |
| AAAAAATCATCGCCGAACAA+TGG | - | chr2_4:61003611-61003630 | Msa0339740:intron | 35.0% | |
| AAAGAACCCAAACCATTGTT+CGG | + | chr2_4:61003626-61003645 | None:intergenic | 35.0% | |
| !! | GATTTGACTTCTCTAAAGTG+AGG | - | chr2_4:61003824-61003843 | Msa0339740:intron | 35.0% |
| GATTTGGAGGAACTAGGTTA+AGG | - | chr2_4:61000922-61000941 | Msa0339740:three_prime_UTR | 40.0% | |
| AGGAACTAGGTTAAGGTTGT+TGG | - | chr2_4:61000929-61000948 | Msa0339740:three_prime_UTR | 40.0% | |
| GGTTGAGAAAGTAGAAGAAG+AGG | - | chr2_4:61001228-61001247 | Msa0339740:CDS | 40.0% | |
| TGCATATGGGTCATGAATTC+TGG | - | chr2_4:61001349-61001368 | Msa0339740:CDS | 40.0% | |
| GCATATGGGTCATGAATTCT+GGG | - | chr2_4:61001350-61001369 | Msa0339740:CDS | 40.0% | |
| TTGAAATTCACGGTCTTCTG+TGG | - | chr2_4:61001416-61001435 | Msa0339740:CDS | 40.0% | |
| GTTACGCTATAGCCGTTATT+TGG | + | chr2_4:61001640-61001659 | None:intergenic | 40.0% | |
| !! | TACGAAGTGTTGTCGAATAG+TGG | - | chr2_4:61001890-61001909 | Msa0339740:CDS | 40.0% |
| TGTTGTCAATCGTGTATCAC+AGG | + | chr2_4:61001957-61001976 | None:intergenic | 40.0% | |
| GCAGTCGTTTGTCATGTTAT+TGG | - | chr2_4:61002563-61002582 | Msa0339740:intron | 40.0% | |
| AGGTAGCCTATAAGCAATAC+TGG | + | chr2_4:61002592-61002611 | None:intergenic | 40.0% | |
| AGATGGTGTGCAGGAATTAT+TGG | - | chr2_4:61002749-61002768 | Msa0339740:intron | 40.0% | |
| ATTCGACCTTTAAATGCTCC+AGG | + | chr2_4:61003020-61003039 | None:intergenic | 40.0% | |
| TTCAAACTCACGTCAACAGT+TGG | + | chr2_4:61003062-61003081 | None:intergenic | 40.0% | |
| !!! | GAAATGCTAGTTTTGGCTAC+GGG | + | chr2_4:61003210-61003229 | None:intergenic | 40.0% |
| ATGCAAATGTGTCTGTTAGG+TGG | - | chr2_4:61003241-61003260 | Msa0339740:intron | 40.0% | |
| TGCAAATGTGTCTGTTAGGT+GGG | - | chr2_4:61003242-61003261 | Msa0339740:intron | 40.0% | |
| ATAGAGAATCTTCAGACCCT+TGG | + | chr2_4:61003319-61003338 | None:intergenic | 40.0% | |
| TTATACACACAGTACGTGAG+AGG | + | chr2_4:61003420-61003439 | None:intergenic | 40.0% | |
| TAACTCTTCAGCAGAAGGTT+CGG | - | chr2_4:61003472-61003491 | Msa0339740:intron | 40.0% | |
| GGTTCTTTCAAAAAACCGTC+TGG | - | chr2_4:61003638-61003657 | Msa0339740:CDS | 40.0% | |
| !!! | GCTAGGTTTGGTTTTGTTTC+TGG | - | chr2_4:61003750-61003769 | Msa0339740:intron | 40.0% |
| ! | CGATCCGCAATTGATAACAC+TGG | + | chr2_4:61001673-61001692 | None:intergenic | 45.0% |
| GTGTTATCAATTGCGGATCG+CGG | - | chr2_4:61001673-61001692 | Msa0339740:intron | 45.0% | |
| ACCATCTATATGGCGCTGTT+TGG | - | chr2_4:61002113-61002132 | Msa0339740:intron | 45.0% | |
| ACCAAACAGCGCCATATAGA+TGG | + | chr2_4:61002117-61002136 | None:intergenic | 45.0% | |
| TGGTGTGCAGGAATTATTGG+TGG | - | chr2_4:61002752-61002771 | Msa0339740:intron | 45.0% | |
| ! | TGTAGTGTGGTCATAGTGGA+AGG | - | chr2_4:61002984-61003003 | Msa0339740:intron | 45.0% |
| ACCTTTAAATGCTCCAGGAC+GGG | + | chr2_4:61003015-61003034 | None:intergenic | 45.0% | |
| GACCTTTAAATGCTCCAGGA+CGG | + | chr2_4:61003016-61003035 | None:intergenic | 45.0% | |
| ! | TGTCTGTTAGGTGGGTTTCT+TGG | - | chr2_4:61003250-61003269 | Msa0339740:intron | 45.0% |
| ATCATCGCCGAACAATGGTT+TGG | - | chr2_4:61003616-61003635 | Msa0339740:intron | 45.0% | |
| TCATCGCCGAACAATGGTTT+GGG | - | chr2_4:61003617-61003636 | Msa0339740:intron | 45.0% | |
| AGCAGCTGCAAGAGAAGAGA+AGG | - | chr2_4:61001207-61001226 | Msa0339740:exon | 50.0% | |
| CAAATAGTGGCTATAGCGCG+CGG | - | chr2_4:61001498-61001517 | Msa0339740:intron | 50.0% | |
| ! | GCGCGCGGTTTAGTTCAAAT+TGG | - | chr2_4:61001513-61001532 | Msa0339740:intron | 50.0% |
| CGGCGCTATTCAGTACAGAT+TGG | - | chr2_4:61001606-61001625 | Msa0339740:intron | 50.0% | |
| TGAATTGCGAGATGGTGTGC+AGG | - | chr2_4:61002740-61002759 | Msa0339740:intron | 50.0% | |
| CCTTTAAATGCTCCAGGACG+GGG | + | chr2_4:61003014-61003033 | None:intergenic | 50.0% | |
| GAGAATCTTCAGACCCTTGG+AGG | + | chr2_4:61003316-61003335 | None:intergenic | 50.0% | |
| ! | CAGTCTAGCTTGTCTCCAGA+CGG | + | chr2_4:61003656-61003675 | None:intergenic | 50.0% |
| TTTGCTTTACCGCCGCGCTA+TGG | - | chr2_4:61001717-61001736 | Msa0339740:CDS | 55.0% | |
| GTTACTGCAGCACCATAGCG+CGG | + | chr2_4:61001732-61001751 | None:intergenic | 55.0% | |
| !! | GCGCTATGGTGCTGCAGTAA+CGG | - | chr2_4:61001731-61001750 | Msa0339740:CDS | 55.0% |
| ! | CCCCGTCCTGGAGCATTTAA+AGG | - | chr2_4:61003011-61003030 | Msa0339740:intron | 55.0% |
| CGTCTGGAGACAAGCTAGAC+TGG | - | chr2_4:61003654-61003673 | Msa0339740:CDS | 55.0% | |
| ACTGCAGCACCATAGCGCGG+CGG | + | chr2_4:61001729-61001748 | None:intergenic | 65.0% | |
| GTGGAAGGTGATCCCCGTCC+TGG | - | chr2_4:61002999-61003018 | Msa0339740:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 61000920 | 61004015 | 61000920 | ID=Msa0339740;Name=Msa0339740 |
| chr2_4 | mRNA | 61000920 | 61004015 | 61000920 | ID=Msa0339740-mRNA-1;Parent=Msa0339740;Name=Msa0339740-mRNA-1;_AED=0.19;_eAED=0.19;_QI=83|1|1|1|1|1|5|300|187 |
| chr2_4 | exon | 61000920 | 61001469 | 61000920 | ID=Msa0339740-mRNA-1:exon:19081;Parent=Msa0339740-mRNA-1 |
| chr2_4 | exon | 61001676 | 61001761 | 61001676 | ID=Msa0339740-mRNA-1:exon:19080;Parent=Msa0339740-mRNA-1 |
| chr2_4 | exon | 61001865 | 61001946 | 61001865 | ID=Msa0339740-mRNA-1:exon:19079;Parent=Msa0339740-mRNA-1 |
| chr2_4 | exon | 61003636 | 61003739 | 61003636 | ID=Msa0339740-mRNA-1:exon:19078;Parent=Msa0339740-mRNA-1 |
| chr2_4 | exon | 61003891 | 61004015 | 61003891 | ID=Msa0339740-mRNA-1:exon:19077;Parent=Msa0339740-mRNA-1 |
| chr2_4 | five_prime_UTR | 61003933 | 61004015 | 61003933 | ID=Msa0339740-mRNA-1:five_prime_utr;Parent=Msa0339740-mRNA-1 |
| chr2_4 | CDS | 61003891 | 61003932 | 61003891 | ID=Msa0339740-mRNA-1:cds;Parent=Msa0339740-mRNA-1 |
| chr2_4 | CDS | 61003636 | 61003739 | 61003636 | ID=Msa0339740-mRNA-1:cds;Parent=Msa0339740-mRNA-1 |
| chr2_4 | CDS | 61001865 | 61001946 | 61001865 | ID=Msa0339740-mRNA-1:cds;Parent=Msa0339740-mRNA-1 |
| chr2_4 | CDS | 61001676 | 61001761 | 61001676 | ID=Msa0339740-mRNA-1:cds;Parent=Msa0339740-mRNA-1 |
| chr2_4 | CDS | 61001220 | 61001469 | 61001220 | ID=Msa0339740-mRNA-1:cds;Parent=Msa0339740-mRNA-1 |
| chr2_4 | three_prime_UTR | 61000920 | 61001219 | 61000920 | ID=Msa0339740-mRNA-1:three_prime_utr;Parent=Msa0339740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
