AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0241190


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0241190 MtrunA17_Chr2g0292531 96.358 659 23 1 1 659 1 658 0.0 1252
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0241190 AT3G24080.4 45.250 579 268 14 5 555 8 565 3.75e-108 340
Msa0241190 AT3G24080.3 45.250 579 268 14 5 555 8 565 3.96e-108 340
Msa0241190 AT3G24080.2 45.250 579 268 14 5 555 8 565 4.18e-108 340
Msa0241190 AT3G24080.1 45.250 579 268 14 5 555 8 565 5.18e-108 340

Find 118 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACCTGTCTTCTCCTTTA+AGG 0.067645 2_2:-16640376 None:intergenic
ATCATTCTGTCATATTCCTT+TGG 0.234372 2_2:-16640885 None:intergenic
ATTGAGGAGGGACCAGATTT+TGG 0.236088 2_2:+16640216 Msa0241190:CDS
TAAGCTTCAATTCCTCTTCT+TGG 0.247682 2_2:-16641400 None:intergenic
ATTCTTTGATGCTTTGATTA+AGG 0.251168 2_2:+16640047 Msa0241190:CDS
CCACATTCATCCCAATCTTT+AGG 0.290694 2_2:-16641029 None:intergenic
GATCCTTCGTGCAGCAAGTT+TGG 0.295537 2_2:+16641463 Msa0241190:CDS
TCATTCTGTCATATTCCTTT+GGG 0.297202 2_2:-16640884 None:intergenic
AAAAGCAAACACAGCAAGTT+TGG 0.300133 2_2:+16641577 Msa0241190:CDS
GAAGCGTAAAACTGCACTTT+TGG 0.321590 2_2:+16641184 Msa0241190:CDS
TGAGGAATTTGAGGAGAAAC+TGG 0.339212 2_2:+16640419 Msa0241190:CDS
TACTTGGGCTTCCTAAAGAT+TGG 0.346122 2_2:+16641018 Msa0241190:CDS
CACTTTCATCTTCACTACTA+TGG 0.346312 2_2:-16640125 None:intergenic
TGAGATGGAAATTGAGAGGC+AGG 0.355422 2_2:+16640572 Msa0241190:CDS
AAGCCAAGAGAAGGGAAAAC+AGG 0.359507 2_2:+16641708 Msa0241190:CDS
ATCCTTCGTGCAGCAAGTTT+GGG 0.366521 2_2:+16641464 Msa0241190:CDS
AAAACAAAACCTAACAGATT+TGG 0.379299 2_2:+16641299 Msa0241190:CDS
GAGTGAAGATGAGGAATTTG+AGG 0.381021 2_2:+16640410 Msa0241190:CDS
TCCTCTTTACCACCAAAATC+TGG 0.391852 2_2:-16640228 None:intergenic
TGCTCGTAAGGTGGAGGGTT+CGG 0.395725 2_2:+16640647 Msa0241190:CDS
GACTTGCTAGAATCAGCCTT+GGG 0.399472 2_2:-16641620 None:intergenic
GTATCCAGGCCAAATCTGTT+AGG 0.416690 2_2:-16641308 None:intergenic
TAGATTATGAGGACACAGTT+GGG 0.421516 2_2:+16641246 Msa0241190:CDS
ACTTGGGCTTCCTAAAGATT+GGG 0.423740 2_2:+16641019 Msa0241190:CDS
TCATCGATCAATAGTATCTC+TGG 0.430675 2_2:-16641332 None:intergenic
GAGTCGAGACTTAAAGCATA+TGG 0.437812 2_2:+16641749 Msa0241190:CDS
AGCAGCAGAAAAGGATGGCT+TGG 0.438918 2_2:+16640335 Msa0241190:CDS
CTTCCGACTACCACCTTCCT+CGG 0.447383 2_2:-16641159 None:intergenic
TTCAATTCCTCTTCTTGGTA+AGG 0.450588 2_2:-16641395 None:intergenic
GATACTATTGATCGATGATA+AGG 0.458126 2_2:+16641337 Msa0241190:CDS
GAGAGAGGCAATACGACAAA+AGG 0.459308 2_2:+16640719 Msa0241190:CDS
AGATCCTGTTCTTAAGCAAA+AGG 0.465168 2_2:+16640080 Msa0241190:CDS
GTCTACTGCAGAATTAGAAA+AGG 0.471726 2_2:+16640854 Msa0241190:CDS
CTAATTCTGCAGTAGACAAA+GGG 0.472024 2_2:-16640848 None:intergenic
TGAGCAAGAGGAGTTGAAAC+AGG 0.482808 2_2:+16640302 Msa0241190:CDS
AATGAGAAAGGTATATCAAA+TGG 0.485679 2_2:+16640258 Msa0241190:CDS
AAATCCAGGGGATAGAGTGC+TGG 0.488077 2_2:+16640620 Msa0241190:CDS
TACTAGTGATGATGATCTCA+TGG 0.493040 2_2:+16641109 Msa0241190:CDS
TTTCAACTCTAAGAGTGATA+AGG 0.498953 2_2:+16640023 Msa0241190:CDS
GATGAATGTGGATCTGATGG+TGG 0.500163 2_2:+16641041 Msa0241190:CDS
GGGTCATGCTCGTAAGGTGG+AGG 0.503285 2_2:+16640641 Msa0241190:CDS
TGATGAGAAGAGTAAAGATA+AGG 0.513195 2_2:+16640149 Msa0241190:CDS
GCAGCAGAAAAGGATGGCTT+GGG 0.515479 2_2:+16640336 Msa0241190:CDS
AGGAAGGTGGTAGTCGGAAG+AGG 0.516130 2_2:+16641162 Msa0241190:CDS
AGAGATTTCAGAAGATGAGA+TGG 0.521290 2_2:+16640557 Msa0241190:CDS
AAAACCTAACAGATTTGGCC+TGG 0.522228 2_2:+16641304 Msa0241190:CDS
GAGGATGAAACAAATGAGAA+AGG 0.523006 2_2:+16640246 Msa0241190:CDS
CTGAAAGCAGCAGAAAAGGA+TGG 0.523891 2_2:+16640330 Msa0241190:CDS
CTCACCTTAAAGGAGAAGAC+AGG 0.529520 2_2:+16640372 Msa0241190:CDS
TTCCGACTACCACCTTCCTC+GGG 0.529859 2_2:-16641158 None:intergenic
CAAGGTAGAGAGTGAAGATG+AGG 0.530933 2_2:+16640401 Msa0241190:CDS
AAAGAGCAAAGAGGAGAGAG+AGG 0.532174 2_2:+16640704 Msa0241190:CDS
ATGAATGTGGATCTGATGGT+GGG 0.532471 2_2:+16641042 Msa0241190:CDS
GAAAGCAAGACAAATGATGA+TGG 0.538249 2_2:+16641208 Msa0241190:CDS
ACACAGAAGAATCAAAATCA+AGG 0.538980 2_2:+16641684 Msa0241190:CDS
GAGTTATGCTGATGAGCAAG+AGG 0.539407 2_2:+16640290 Msa0241190:CDS
AGTGCTGGGTCATGCTCGTA+AGG 0.540823 2_2:+16640635 Msa0241190:CDS
AGATTATGAGGACACAGTTG+GGG 0.541091 2_2:+16641247 Msa0241190:CDS
TAGTGAGGGTGAAGAAGACA+TGG 0.541771 2_2:+16640965 Msa0241190:CDS
TCTAATTCTGCAGTAGACAA+AGG 0.542118 2_2:-16640849 None:intergenic
TTAGATTATGAGGACACAGT+TGG 0.543563 2_2:+16641245 Msa0241190:CDS
GTTAACTTCAAACAATGTTG+TGG 0.543762 2_2:+16641547 Msa0241190:CDS
TGACCCAGCACTCTATCCCC+TGG 0.546475 2_2:-16640624 None:intergenic
ATAGTATCTCTGGAGTATCC+AGG 0.549189 2_2:-16641322 None:intergenic
TGACTTGCTAGAATCAGCCT+TGG 0.550613 2_2:-16641621 None:intergenic
AAAGATACATGCTGAAGATG+AGG 0.550832 2_2:+16641432 Msa0241190:CDS
GGCAAAGCATTTGATTGAGG+AGG 0.551984 2_2:+16640203 Msa0241190:CDS
CTCATCAAACAGTTGTGTTG+TGG 0.554487 2_2:+16641646 Msa0241190:CDS
ACTTGCTCCTTACCAAGAAG+AGG 0.555311 2_2:+16641388 Msa0241190:CDS
ACTATTTCAAGAACAAAATG+TGG 0.558440 2_2:+16640487 Msa0241190:CDS
AGAAAAGGAGTTTGACCCAA+AGG 0.559539 2_2:+16640869 Msa0241190:CDS
AATCAAGGAAAGCCAAGAGA+AGG 0.564095 2_2:+16641699 Msa0241190:CDS
TATTGGTTCACCTTCACACT+CGG 0.566868 2_2:+16639951 Msa0241190:CDS
AATCCAGGGGATAGAGTGCT+GGG 0.568166 2_2:+16640621 Msa0241190:CDS
AAAGGATGGCTTGGGAGATG+AGG 0.568697 2_2:+16640344 Msa0241190:CDS
ATCAAGGAAAGCCAAGAGAA+GGG 0.568922 2_2:+16641700 Msa0241190:CDS
TGGGATGAATGTGGATCTGA+TGG 0.570198 2_2:+16641038 Msa0241190:CDS
GGCAATACGACAAAAGGAAA+GGG 0.576585 2_2:+16640725 Msa0241190:CDS
GCAAAGCATTTGATTGAGGA+GGG 0.577160 2_2:+16640204 Msa0241190:CDS
AGGCAATACGACAAAAGGAA+AGG 0.579482 2_2:+16640724 Msa0241190:CDS
CATGCTGAAGATGAGGGCTA+AGG 0.580350 2_2:+16641439 Msa0241190:CDS
AAGATACATGCTGAAGATGA+GGG 0.584857 2_2:+16641433 Msa0241190:CDS
ACGACAAAAGGAAAGGGATG+AGG 0.586281 2_2:+16640731 Msa0241190:CDS
TTATGAGGACACAGTTGGGG+GGG 0.587460 2_2:+16641250 Msa0241190:CDS
CCTAAAGATTGGGATGAATG+TGG 0.587753 2_2:+16641029 Msa0241190:CDS
GTTTGAGCATAACAAGAGGC+GGG 0.590327 2_2:+16639888 Msa0241190:CDS
TATGCTTTAAGTCTCGACTC+TGG 0.591074 2_2:-16641746 None:intergenic
AAAAGATAAAGAAGATTGCA+GGG 0.591451 2_2:+16640805 Msa0241190:CDS
GCTGGGTCATGCTCGTAAGG+TGG 0.591483 2_2:+16640638 Msa0241190:CDS
AACTTCAAACAATGTTGTGG+AGG 0.597494 2_2:+16641550 Msa0241190:CDS
GAGAAAGGTATATCAAATGG+TGG 0.598159 2_2:+16640261 Msa0241190:CDS
GGAGAAGACAGGTGAAGACA+AGG 0.599497 2_2:+16640383 Msa0241190:CDS
AGCCAAGAGAAGGGAAAACA+GGG 0.602506 2_2:+16641709 Msa0241190:CDS
AAAGAGGACATTCCCGAGGA+AGG 0.603495 2_2:+16641146 Msa0241190:CDS
GGTCATGCTCGTAAGGTGGA+GGG 0.605836 2_2:+16640642 Msa0241190:CDS
GGTGGCAAAGCATTTGATTG+AGG 0.605973 2_2:+16640200 Msa0241190:CDS
TTCCCGAGGAAGGTGGTAGT+CGG 0.606171 2_2:+16641156 Msa0241190:CDS
CACAACACAACTGTTTGATG+AGG 0.608834 2_2:-16641645 None:intergenic
GATTATGAGGACACAGTTGG+GGG 0.611884 2_2:+16641248 Msa0241190:CDS
GATGCAAGAGATACAAGAGA+AGG 0.616907 2_2:+16640779 Msa0241190:CDS
AGTGATGATGATCTCATGGA+AGG 0.617533 2_2:+16641113 Msa0241190:CDS
TCATCATCTTCCGAGTGTGA+AGG 0.624572 2_2:-16639961 None:intergenic
GGTTTGAGCATAACAAGAGG+CGG 0.627786 2_2:+16639887 Msa0241190:CDS
AAGATGAGATGGAAATTGAG+AGG 0.629773 2_2:+16640568 Msa0241190:CDS
GAAGAGAAATAAGAAGCCCA+AGG 0.630672 2_2:+16641604 Msa0241190:CDS
ATTATGAGGACACAGTTGGG+GGG 0.631668 2_2:+16641249 Msa0241190:CDS
GAGGACATTCCCGAGGAAGG+TGG 0.633486 2_2:+16641149 Msa0241190:CDS
TGCGAAGTATTATAACGAAG+AGG 0.635980 2_2:+16640923 Msa0241190:CDS
CTCAAATATCAAGATAGACG+AGG 0.643202 2_2:+16639852 Msa0241190:CDS
TACCCAAACTTGCTGCACGA+AGG 0.643872 2_2:-16641466 None:intergenic
ATCAAACAGTTGTGTTGTGG+AGG 0.648436 2_2:+16641649 Msa0241190:CDS
AGAGCAGAGAAAGAGCAAAG+AGG 0.649070 2_2:+16640695 Msa0241190:CDS
TAGACGAGGAATATGCTCGT+AGG 0.664106 2_2:+16639866 Msa0241190:CDS
CTATTTCAAGAACAAAATGT+GGG 0.673159 2_2:+16640488 Msa0241190:CDS
TGAGCATAACAAGAGGCGGG+AGG 0.702904 2_2:+16639891 Msa0241190:CDS
GTAGGTTTGAGCATAACAAG+AGG 0.707686 2_2:+16639884 Msa0241190:CDS
GTAAGGTGGAGGGTTCGGTG+AGG 0.731572 2_2:+16640652 Msa0241190:CDS
AATGTGGGTAGACAAGAATG+CGG 0.745968 2_2:+16640503 Msa0241190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTATAAATTAGATTATG+AGG + chr2_2:16641235-16641254 Msa0241190:CDS 15.0%
!!! GTTTTATAAATTAGATTATG+AGG + chr2_2:16641235-16641254 Msa0241190:CDS 15.0%
!! TATGAAGAATTGAAAAAGAA+AGG + chr2_2:16639925-16639944 Msa0241190:CDS 20.0%
!! ATGAAGAATTGAAAAAGAAA+GGG + chr2_2:16639926-16639945 Msa0241190:CDS 20.0%
!! TATGAAGAATTGAAAAAGAA+AGG + chr2_2:16639925-16639944 Msa0241190:CDS 20.0%
!! ATGAAGAATTGAAAAAGAAA+GGG + chr2_2:16639926-16639945 Msa0241190:CDS 20.0%
!! TTTTCAATTCTTCATAACGT+TGG - chr2_2:16639921-16639940 None:intergenic 25.0%
! TGAAGAATTGAAAAAGAAAG+GGG + chr2_2:16639927-16639946 Msa0241190:CDS 25.0%
! ATTCTTTGATGCTTTGATTA+AGG + chr2_2:16640047-16640066 Msa0241190:CDS 25.0%
!!! GAAAAAGTCAATGTTTTTGA+AGG + chr2_2:16640173-16640192 Msa0241190:CDS 25.0%
!! AATGAGAAAGGTATATCAAA+TGG + chr2_2:16640258-16640277 Msa0241190:CDS 25.0%
! ACTATTTCAAGAACAAAATG+TGG + chr2_2:16640487-16640506 Msa0241190:CDS 25.0%
! CTATTTCAAGAACAAAATGT+GGG + chr2_2:16640488-16640507 Msa0241190:CDS 25.0%
! AAAAAGATAAAGAAGATTGC+AGG + chr2_2:16640804-16640823 Msa0241190:CDS 25.0%
! AAAAGATAAAGAAGATTGCA+GGG + chr2_2:16640805-16640824 Msa0241190:CDS 25.0%
! AAAAAGAGGATGATTTACTT+GGG + chr2_2:16641003-16641022 Msa0241190:CDS 25.0%
!!! AAATCTGTTAGGTTTTGTTT+TGG - chr2_2:16641300-16641319 None:intergenic 25.0%
! AAAACAAAACCTAACAGATT+TGG + chr2_2:16641299-16641318 Msa0241190:CDS 25.0%
! TAAGAAGAAAAAGAGGTTAA+AGG + chr2_2:16641487-16641506 Msa0241190:CDS 25.0%
!! TTTTCAATTCTTCATAACGT+TGG - chr2_2:16639921-16639940 None:intergenic 25.0%
! TGAAGAATTGAAAAAGAAAG+GGG + chr2_2:16639927-16639946 Msa0241190:CDS 25.0%
! ATTCTTTGATGCTTTGATTA+AGG + chr2_2:16640047-16640066 Msa0241190:CDS 25.0%
!!! GAAAAAGTCAATGTTTTTGA+AGG + chr2_2:16640173-16640192 Msa0241190:CDS 25.0%
!! AATGAGAAAGGTATATCAAA+TGG + chr2_2:16640258-16640277 Msa0241190:CDS 25.0%
! ACTATTTCAAGAACAAAATG+TGG + chr2_2:16640487-16640506 Msa0241190:CDS 25.0%
! CTATTTCAAGAACAAAATGT+GGG + chr2_2:16640488-16640507 Msa0241190:CDS 25.0%
! AAAAAGATAAAGAAGATTGC+AGG + chr2_2:16640804-16640823 Msa0241190:CDS 25.0%
! AAAAGATAAAGAAGATTGCA+GGG + chr2_2:16640805-16640824 Msa0241190:CDS 25.0%
! AAAAAGAGGATGATTTACTT+GGG + chr2_2:16641003-16641022 Msa0241190:CDS 25.0%
!!! AAATCTGTTAGGTTTTGTTT+TGG - chr2_2:16641300-16641319 None:intergenic 25.0%
! AAAACAAAACCTAACAGATT+TGG + chr2_2:16641299-16641318 Msa0241190:CDS 25.0%
! TAAGAAGAAAAAGAGGTTAA+AGG + chr2_2:16641487-16641506 Msa0241190:CDS 25.0%
! ATGACTCAGAACATTTTTGA+TGG + chr2_2:16639805-16639824 Msa0241190:CDS 30.0%
TTGAAAAAGAAAGGGGTTAT+TGG + chr2_2:16639934-16639953 Msa0241190:CDS 30.0%
! TTTCAACTCTAAGAGTGATA+AGG + chr2_2:16640023-16640042 Msa0241190:CDS 30.0%
TGATGAGAAGAGTAAAGATA+AGG + chr2_2:16640149-16640168 Msa0241190:CDS 30.0%
! AATGCGGAGATTTTAAATGT+TGG + chr2_2:16640519-16640538 Msa0241190:CDS 30.0%
!!! AGAGTATGAAGTTAGTTTTC+AGG + chr2_2:16640596-16640615 Msa0241190:CDS 30.0%
!! TTAGTTTTCAGGAAAATCCA+GGG + chr2_2:16640607-16640626 Msa0241190:CDS 30.0%
TCATTCTGTCATATTCCTTT+GGG - chr2_2:16640887-16640906 None:intergenic 30.0%
ATCATTCTGTCATATTCCTT+TGG - chr2_2:16640888-16640907 None:intergenic 30.0%
!!! TCATCCTCTTTTTCAAAATC+TGG - chr2_2:16640996-16641015 None:intergenic 30.0%
GAAAAAGAGGATGATTTACT+TGG + chr2_2:16641002-16641021 Msa0241190:CDS 30.0%
GATACTATTGATCGATGATA+AGG + chr2_2:16641337-16641356 Msa0241190:CDS 30.0%
GTTAACTTCAAACAATGTTG+TGG + chr2_2:16641547-16641566 Msa0241190:CDS 30.0%
ACACAGAAGAATCAAAATCA+AGG + chr2_2:16641684-16641703 Msa0241190:CDS 30.0%
! ATGACTCAGAACATTTTTGA+TGG + chr2_2:16639805-16639824 Msa0241190:CDS 30.0%
TTGAAAAAGAAAGGGGTTAT+TGG + chr2_2:16639934-16639953 Msa0241190:CDS 30.0%
! TTTCAACTCTAAGAGTGATA+AGG + chr2_2:16640023-16640042 Msa0241190:CDS 30.0%
TGATGAGAAGAGTAAAGATA+AGG + chr2_2:16640149-16640168 Msa0241190:CDS 30.0%
! AATGCGGAGATTTTAAATGT+TGG + chr2_2:16640519-16640538 Msa0241190:CDS 30.0%
!!! AGAGTATGAAGTTAGTTTTC+AGG + chr2_2:16640596-16640615 Msa0241190:CDS 30.0%
!! TTAGTTTTCAGGAAAATCCA+GGG + chr2_2:16640607-16640626 Msa0241190:CDS 30.0%
TCATTCTGTCATATTCCTTT+GGG - chr2_2:16640887-16640906 None:intergenic 30.0%
ATCATTCTGTCATATTCCTT+TGG - chr2_2:16640888-16640907 None:intergenic 30.0%
!!! TCATCCTCTTTTTCAAAATC+TGG - chr2_2:16640996-16641015 None:intergenic 30.0%
GAAAAAGAGGATGATTTACT+TGG + chr2_2:16641002-16641021 Msa0241190:CDS 30.0%
GATACTATTGATCGATGATA+AGG + chr2_2:16641337-16641356 Msa0241190:CDS 30.0%
GTTAACTTCAAACAATGTTG+TGG + chr2_2:16641547-16641566 Msa0241190:CDS 30.0%
ACACAGAAGAATCAAAATCA+AGG + chr2_2:16641684-16641703 Msa0241190:CDS 30.0%
CTCAAATATCAAGATAGACG+AGG + chr2_2:16639852-16639871 Msa0241190:CDS 35.0%
AGATCCTGTTCTTAAGCAAA+AGG + chr2_2:16640080-16640099 Msa0241190:CDS 35.0%
! ACATCCTTTTGCTTAAGAAC+AGG - chr2_2:16640087-16640106 None:intergenic 35.0%
CACTTTCATCTTCACTACTA+TGG - chr2_2:16640128-16640147 None:intergenic 35.0%
!! GTCAATGTTTTTGAAGGATG+TGG + chr2_2:16640179-16640198 Msa0241190:CDS 35.0%
!! AATGTTTTTGAAGGATGTGG+TGG + chr2_2:16640182-16640201 Msa0241190:CDS 35.0%
GAGGATGAAACAAATGAGAA+AGG + chr2_2:16640246-16640265 Msa0241190:CDS 35.0%
! GAGAAAGGTATATCAAATGG+TGG + chr2_2:16640261-16640280 Msa0241190:CDS 35.0%
!! TTTTCTGAAAGCAGCAGAAA+AGG + chr2_2:16640326-16640345 Msa0241190:CDS 35.0%
! TGAGGATTTTCTCACCTTAA+AGG + chr2_2:16640362-16640381 Msa0241190:CDS 35.0%
! GGAGATTTTAAATGTTGGAG+AGG + chr2_2:16640524-16640543 Msa0241190:CDS 35.0%
! GATTTTAAATGTTGGAGAGG+AGG + chr2_2:16640527-16640546 Msa0241190:CDS 35.0%
AGAGATTTCAGAAGATGAGA+TGG + chr2_2:16640557-16640576 Msa0241190:CDS 35.0%
AAGATGAGATGGAAATTGAG+AGG + chr2_2:16640568-16640587 Msa0241190:CDS 35.0%
!!! GTTAGTTTTCAGGAAAATCC+AGG + chr2_2:16640606-16640625 Msa0241190:CDS 35.0%
!! TAGTTTTCAGGAAAATCCAG+GGG + chr2_2:16640608-16640627 Msa0241190:CDS 35.0%
TGAGGAAAAAGACAAACTCA+AGG + chr2_2:16640670-16640689 Msa0241190:CDS 35.0%
CTAATTCTGCAGTAGACAAA+GGG - chr2_2:16640851-16640870 None:intergenic 35.0%
TCTAATTCTGCAGTAGACAA+AGG - chr2_2:16640852-16640871 None:intergenic 35.0%
GTCTACTGCAGAATTAGAAA+AGG + chr2_2:16640854-16640873 Msa0241190:CDS 35.0%
! TGCGAAGTATTATAACGAAG+AGG + chr2_2:16640923-16640942 Msa0241190:CDS 35.0%
!! GAAGCCAGATTTTGAAAAAG+AGG + chr2_2:16640989-16641008 Msa0241190:CDS 35.0%
! TACTAGTGATGATGATCTCA+TGG + chr2_2:16641109-16641128 Msa0241190:CDS 35.0%
GAAAGCAAGACAAATGATGA+TGG + chr2_2:16641208-16641227 Msa0241190:CDS 35.0%
TTAGATTATGAGGACACAGT+TGG + chr2_2:16641245-16641264 Msa0241190:CDS 35.0%
TAGATTATGAGGACACAGTT+GGG + chr2_2:16641246-16641265 Msa0241190:CDS 35.0%
TCATCGATCAATAGTATCTC+TGG - chr2_2:16641335-16641354 None:intergenic 35.0%
!!! GTAAGGAGCAAGTTTTTTCA+AGG - chr2_2:16641381-16641400 None:intergenic 35.0%
TTCAATTCCTCTTCTTGGTA+AGG - chr2_2:16641398-16641417 None:intergenic 35.0%
TAAGCTTCAATTCCTCTTCT+TGG - chr2_2:16641403-16641422 None:intergenic 35.0%
AAAGATACATGCTGAAGATG+AGG + chr2_2:16641432-16641451 Msa0241190:CDS 35.0%
AAGATACATGCTGAAGATGA+GGG + chr2_2:16641433-16641452 Msa0241190:CDS 35.0%
GTTTGGGTAAGAAGAAAAAG+AGG + chr2_2:16641480-16641499 Msa0241190:CDS 35.0%
AACTTCAAACAATGTTGTGG+AGG + chr2_2:16641550-16641569 Msa0241190:CDS 35.0%
AAAAGCAAACACAGCAAGTT+TGG + chr2_2:16641577-16641596 Msa0241190:CDS 35.0%
CTCAAATATCAAGATAGACG+AGG + chr2_2:16639852-16639871 Msa0241190:CDS 35.0%
AGATCCTGTTCTTAAGCAAA+AGG + chr2_2:16640080-16640099 Msa0241190:CDS 35.0%
! ACATCCTTTTGCTTAAGAAC+AGG - chr2_2:16640087-16640106 None:intergenic 35.0%
CACTTTCATCTTCACTACTA+TGG - chr2_2:16640128-16640147 None:intergenic 35.0%
!! GTCAATGTTTTTGAAGGATG+TGG + chr2_2:16640179-16640198 Msa0241190:CDS 35.0%
!! AATGTTTTTGAAGGATGTGG+TGG + chr2_2:16640182-16640201 Msa0241190:CDS 35.0%
GAGGATGAAACAAATGAGAA+AGG + chr2_2:16640246-16640265 Msa0241190:CDS 35.0%
! GAGAAAGGTATATCAAATGG+TGG + chr2_2:16640261-16640280 Msa0241190:CDS 35.0%
!! TTTTCTGAAAGCAGCAGAAA+AGG + chr2_2:16640326-16640345 Msa0241190:CDS 35.0%
! TGAGGATTTTCTCACCTTAA+AGG + chr2_2:16640362-16640381 Msa0241190:CDS 35.0%
! GGAGATTTTAAATGTTGGAG+AGG + chr2_2:16640524-16640543 Msa0241190:CDS 35.0%
! GATTTTAAATGTTGGAGAGG+AGG + chr2_2:16640527-16640546 Msa0241190:CDS 35.0%
AGAGATTTCAGAAGATGAGA+TGG + chr2_2:16640557-16640576 Msa0241190:CDS 35.0%
AAGATGAGATGGAAATTGAG+AGG + chr2_2:16640568-16640587 Msa0241190:CDS 35.0%
!!! GTTAGTTTTCAGGAAAATCC+AGG + chr2_2:16640606-16640625 Msa0241190:CDS 35.0%
!! TAGTTTTCAGGAAAATCCAG+GGG + chr2_2:16640608-16640627 Msa0241190:CDS 35.0%
TGAGGAAAAAGACAAACTCA+AGG + chr2_2:16640670-16640689 Msa0241190:CDS 35.0%
CTAATTCTGCAGTAGACAAA+GGG - chr2_2:16640851-16640870 None:intergenic 35.0%
TCTAATTCTGCAGTAGACAA+AGG - chr2_2:16640852-16640871 None:intergenic 35.0%
GTCTACTGCAGAATTAGAAA+AGG + chr2_2:16640854-16640873 Msa0241190:CDS 35.0%
! TGCGAAGTATTATAACGAAG+AGG + chr2_2:16640923-16640942 Msa0241190:CDS 35.0%
!! GAAGCCAGATTTTGAAAAAG+AGG + chr2_2:16640989-16641008 Msa0241190:CDS 35.0%
! TACTAGTGATGATGATCTCA+TGG + chr2_2:16641109-16641128 Msa0241190:CDS 35.0%
GAAAGCAAGACAAATGATGA+TGG + chr2_2:16641208-16641227 Msa0241190:CDS 35.0%
TTAGATTATGAGGACACAGT+TGG + chr2_2:16641245-16641264 Msa0241190:CDS 35.0%
TAGATTATGAGGACACAGTT+GGG + chr2_2:16641246-16641265 Msa0241190:CDS 35.0%
TCATCGATCAATAGTATCTC+TGG - chr2_2:16641335-16641354 None:intergenic 35.0%
!!! GTAAGGAGCAAGTTTTTTCA+AGG - chr2_2:16641381-16641400 None:intergenic 35.0%
TTCAATTCCTCTTCTTGGTA+AGG - chr2_2:16641398-16641417 None:intergenic 35.0%
TAAGCTTCAATTCCTCTTCT+TGG - chr2_2:16641403-16641422 None:intergenic 35.0%
AAAGATACATGCTGAAGATG+AGG + chr2_2:16641432-16641451 Msa0241190:CDS 35.0%
AAGATACATGCTGAAGATGA+GGG + chr2_2:16641433-16641452 Msa0241190:CDS 35.0%
GTTTGGGTAAGAAGAAAAAG+AGG + chr2_2:16641480-16641499 Msa0241190:CDS 35.0%
AACTTCAAACAATGTTGTGG+AGG + chr2_2:16641550-16641569 Msa0241190:CDS 35.0%
AAAAGCAAACACAGCAAGTT+TGG + chr2_2:16641577-16641596 Msa0241190:CDS 35.0%
GTAGGTTTGAGCATAACAAG+AGG + chr2_2:16639884-16639903 Msa0241190:CDS 40.0%
!! TATTGGTTCACCTTCACACT+CGG + chr2_2:16639951-16639970 Msa0241190:CDS 40.0%
! GCAAAGCATTTGATTGAGGA+GGG + chr2_2:16640204-16640223 Msa0241190:CDS 40.0%
!! ACCAGATTTTGGTGGTAAAG+AGG + chr2_2:16640227-16640246 Msa0241190:CDS 40.0%
TCCTCTTTACCACCAAAATC+TGG - chr2_2:16640231-16640250 None:intergenic 40.0%
TTCACCTGTCTTCTCCTTTA+AGG - chr2_2:16640379-16640398 None:intergenic 40.0%
GAGTGAAGATGAGGAATTTG+AGG + chr2_2:16640410-16640429 Msa0241190:CDS 40.0%
TGAGGAATTTGAGGAGAAAC+TGG + chr2_2:16640419-16640438 Msa0241190:CDS 40.0%
AATGTGGGTAGACAAGAATG+CGG + chr2_2:16640503-16640522 Msa0241190:CDS 40.0%
AGGCAATACGACAAAAGGAA+AGG + chr2_2:16640724-16640743 Msa0241190:CDS 40.0%
GGCAATACGACAAAAGGAAA+GGG + chr2_2:16640725-16640744 Msa0241190:CDS 40.0%
GATGCAAGAGATACAAGAGA+AGG + chr2_2:16640779-16640798 Msa0241190:CDS 40.0%
AGAAAAGGAGTTTGACCCAA+AGG + chr2_2:16640869-16640888 Msa0241190:CDS 40.0%
! TGACCCTGATTTTTGTAGTG+AGG + chr2_2:16640950-16640969 Msa0241190:CDS 40.0%
! GACCCTGATTTTTGTAGTGA+GGG + chr2_2:16640951-16640970 Msa0241190:CDS 40.0%
CACCCTCACTACAAAAATCA+GGG - chr2_2:16640956-16640975 None:intergenic 40.0%
TCACCCTCACTACAAAAATC+AGG - chr2_2:16640957-16640976 None:intergenic 40.0%
TACTTGGGCTTCCTAAAGAT+TGG + chr2_2:16641018-16641037 Msa0241190:CDS 40.0%
ACTTGGGCTTCCTAAAGATT+GGG + chr2_2:16641019-16641038 Msa0241190:CDS 40.0%
CCACATTCATCCCAATCTTT+AGG - chr2_2:16641032-16641051 None:intergenic 40.0%
CCTAAAGATTGGGATGAATG+TGG + chr2_2:16641029-16641048 Msa0241190:CDS 40.0%
ATGAATGTGGATCTGATGGT+GGG + chr2_2:16641042-16641061 Msa0241190:CDS 40.0%
! AGTGATGATGATCTCATGGA+AGG + chr2_2:16641113-16641132 Msa0241190:CDS 40.0%
GGAAGGAGAAACTGAAAAAG+AGG + chr2_2:16641130-16641149 Msa0241190:CDS 40.0%
! GAAGCGTAAAACTGCACTTT+TGG + chr2_2:16641184-16641203 Msa0241190:CDS 40.0%
AGATTATGAGGACACAGTTG+GGG + chr2_2:16641247-16641266 Msa0241190:CDS 40.0%
AAAACCTAACAGATTTGGCC+TGG + chr2_2:16641304-16641323 Msa0241190:CDS 40.0%
!! ATAGTATCTCTGGAGTATCC+AGG - chr2_2:16641325-16641344 None:intergenic 40.0%
GAAGAGAAATAAGAAGCCCA+AGG + chr2_2:16641604-16641623 Msa0241190:CDS 40.0%
CACAACACAACTGTTTGATG+AGG - chr2_2:16641648-16641667 None:intergenic 40.0%
CTCATCAAACAGTTGTGTTG+TGG + chr2_2:16641646-16641665 Msa0241190:CDS 40.0%
ATCAAACAGTTGTGTTGTGG+AGG + chr2_2:16641649-16641668 Msa0241190:CDS 40.0%
AATCAAGGAAAGCCAAGAGA+AGG + chr2_2:16641699-16641718 Msa0241190:CDS 40.0%
ATCAAGGAAAGCCAAGAGAA+GGG + chr2_2:16641700-16641719 Msa0241190:CDS 40.0%
! TATGCTTTAAGTCTCGACTC+TGG - chr2_2:16641749-16641768 None:intergenic 40.0%
GAGTCGAGACTTAAAGCATA+TGG + chr2_2:16641749-16641768 Msa0241190:CDS 40.0%
GTAGGTTTGAGCATAACAAG+AGG + chr2_2:16639884-16639903 Msa0241190:CDS 40.0%
!! TATTGGTTCACCTTCACACT+CGG + chr2_2:16639951-16639970 Msa0241190:CDS 40.0%
! GCAAAGCATTTGATTGAGGA+GGG + chr2_2:16640204-16640223 Msa0241190:CDS 40.0%
!! ACCAGATTTTGGTGGTAAAG+AGG + chr2_2:16640227-16640246 Msa0241190:CDS 40.0%
TCCTCTTTACCACCAAAATC+TGG - chr2_2:16640231-16640250 None:intergenic 40.0%
TTCACCTGTCTTCTCCTTTA+AGG - chr2_2:16640379-16640398 None:intergenic 40.0%
GAGTGAAGATGAGGAATTTG+AGG + chr2_2:16640410-16640429 Msa0241190:CDS 40.0%
TGAGGAATTTGAGGAGAAAC+TGG + chr2_2:16640419-16640438 Msa0241190:CDS 40.0%
AATGTGGGTAGACAAGAATG+CGG + chr2_2:16640503-16640522 Msa0241190:CDS 40.0%
AGGCAATACGACAAAAGGAA+AGG + chr2_2:16640724-16640743 Msa0241190:CDS 40.0%
GGCAATACGACAAAAGGAAA+GGG + chr2_2:16640725-16640744 Msa0241190:CDS 40.0%
GATGCAAGAGATACAAGAGA+AGG + chr2_2:16640779-16640798 Msa0241190:CDS 40.0%
AGAAAAGGAGTTTGACCCAA+AGG + chr2_2:16640869-16640888 Msa0241190:CDS 40.0%
! TGACCCTGATTTTTGTAGTG+AGG + chr2_2:16640950-16640969 Msa0241190:CDS 40.0%
! GACCCTGATTTTTGTAGTGA+GGG + chr2_2:16640951-16640970 Msa0241190:CDS 40.0%
CACCCTCACTACAAAAATCA+GGG - chr2_2:16640956-16640975 None:intergenic 40.0%
TCACCCTCACTACAAAAATC+AGG - chr2_2:16640957-16640976 None:intergenic 40.0%
TACTTGGGCTTCCTAAAGAT+TGG + chr2_2:16641018-16641037 Msa0241190:CDS 40.0%
ACTTGGGCTTCCTAAAGATT+GGG + chr2_2:16641019-16641038 Msa0241190:CDS 40.0%
CCACATTCATCCCAATCTTT+AGG - chr2_2:16641032-16641051 None:intergenic 40.0%
CCTAAAGATTGGGATGAATG+TGG + chr2_2:16641029-16641048 Msa0241190:CDS 40.0%
ATGAATGTGGATCTGATGGT+GGG + chr2_2:16641042-16641061 Msa0241190:CDS 40.0%
! AGTGATGATGATCTCATGGA+AGG + chr2_2:16641113-16641132 Msa0241190:CDS 40.0%
GGAAGGAGAAACTGAAAAAG+AGG + chr2_2:16641130-16641149 Msa0241190:CDS 40.0%
! GAAGCGTAAAACTGCACTTT+TGG + chr2_2:16641184-16641203 Msa0241190:CDS 40.0%
AGATTATGAGGACACAGTTG+GGG + chr2_2:16641247-16641266 Msa0241190:CDS 40.0%
AAAACCTAACAGATTTGGCC+TGG + chr2_2:16641304-16641323 Msa0241190:CDS 40.0%
!! ATAGTATCTCTGGAGTATCC+AGG - chr2_2:16641325-16641344 None:intergenic 40.0%
GAAGAGAAATAAGAAGCCCA+AGG + chr2_2:16641604-16641623 Msa0241190:CDS 40.0%
CACAACACAACTGTTTGATG+AGG - chr2_2:16641648-16641667 None:intergenic 40.0%
CTCATCAAACAGTTGTGTTG+TGG + chr2_2:16641646-16641665 Msa0241190:CDS 40.0%
ATCAAACAGTTGTGTTGTGG+AGG + chr2_2:16641649-16641668 Msa0241190:CDS 40.0%
AATCAAGGAAAGCCAAGAGA+AGG + chr2_2:16641699-16641718 Msa0241190:CDS 40.0%
ATCAAGGAAAGCCAAGAGAA+GGG + chr2_2:16641700-16641719 Msa0241190:CDS 40.0%
! TATGCTTTAAGTCTCGACTC+TGG - chr2_2:16641749-16641768 None:intergenic 40.0%
GAGTCGAGACTTAAAGCATA+TGG + chr2_2:16641749-16641768 Msa0241190:CDS 40.0%
TAGACGAGGAATATGCTCGT+AGG + chr2_2:16639866-16639885 Msa0241190:CDS 45.0%
GGTTTGAGCATAACAAGAGG+CGG + chr2_2:16639887-16639906 Msa0241190:CDS 45.0%
GTTTGAGCATAACAAGAGGC+GGG + chr2_2:16639888-16639907 Msa0241190:CDS 45.0%
TCATCATCTTCCGAGTGTGA+AGG - chr2_2:16639964-16639983 None:intergenic 45.0%
! GGTGGCAAAGCATTTGATTG+AGG + chr2_2:16640200-16640219 Msa0241190:CDS 45.0%
! GGCAAAGCATTTGATTGAGG+AGG + chr2_2:16640203-16640222 Msa0241190:CDS 45.0%
! ATTGAGGAGGGACCAGATTT+TGG + chr2_2:16640216-16640235 Msa0241190:CDS 45.0%
GAGTTATGCTGATGAGCAAG+AGG + chr2_2:16640290-16640309 Msa0241190:CDS 45.0%
TGAGCAAGAGGAGTTGAAAC+AGG + chr2_2:16640302-16640321 Msa0241190:CDS 45.0%
CTGAAAGCAGCAGAAAAGGA+TGG + chr2_2:16640330-16640349 Msa0241190:CDS 45.0%
CTCACCTTAAAGGAGAAGAC+AGG + chr2_2:16640372-16640391 Msa0241190:CDS 45.0%
CAAGGTAGAGAGTGAAGATG+AGG + chr2_2:16640401-16640420 Msa0241190:CDS 45.0%
TGAGATGGAAATTGAGAGGC+AGG + chr2_2:16640572-16640591 Msa0241190:CDS 45.0%
AGAGCAGAGAAAGAGCAAAG+AGG + chr2_2:16640695-16640714 Msa0241190:CDS 45.0%
AAAGAGCAAAGAGGAGAGAG+AGG + chr2_2:16640704-16640723 Msa0241190:CDS 45.0%
GAGAGAGGCAATACGACAAA+AGG + chr2_2:16640719-16640738 Msa0241190:CDS 45.0%
ACGACAAAAGGAAAGGGATG+AGG + chr2_2:16640731-16640750 Msa0241190:CDS 45.0%
TAGTGAGGGTGAAGAAGACA+TGG + chr2_2:16640965-16640984 Msa0241190:CDS 45.0%
TGGGATGAATGTGGATCTGA+TGG + chr2_2:16641038-16641057 Msa0241190:CDS 45.0%
GATGAATGTGGATCTGATGG+TGG + chr2_2:16641041-16641060 Msa0241190:CDS 45.0%
!!! TGGATCTGATGGTGGGTTTT+TGG + chr2_2:16641049-16641068 Msa0241190:CDS 45.0%
TGAAAAAGAGGACATTCCCG+AGG + chr2_2:16641142-16641161 Msa0241190:CDS 45.0%
GATTATGAGGACACAGTTGG+GGG + chr2_2:16641248-16641267 Msa0241190:CDS 45.0%
ATTATGAGGACACAGTTGGG+GGG + chr2_2:16641249-16641268 Msa0241190:CDS 45.0%
GTATCCAGGCCAAATCTGTT+AGG - chr2_2:16641311-16641330 None:intergenic 45.0%
ACTTGCTCCTTACCAAGAAG+AGG + chr2_2:16641388-16641407 Msa0241190:CDS 45.0%
ATCCTTCGTGCAGCAAGTTT+GGG + chr2_2:16641464-16641483 Msa0241190:CDS 45.0%
!! GACTTGCTAGAATCAGCCTT+GGG - chr2_2:16641623-16641642 None:intergenic 45.0%
!! TGACTTGCTAGAATCAGCCT+TGG - chr2_2:16641624-16641643 None:intergenic 45.0%
AAGCCAAGAGAAGGGAAAAC+AGG + chr2_2:16641708-16641727 Msa0241190:CDS 45.0%
AGCCAAGAGAAGGGAAAACA+GGG + chr2_2:16641709-16641728 Msa0241190:CDS 45.0%
TAGACGAGGAATATGCTCGT+AGG + chr2_2:16639866-16639885 Msa0241190:CDS 45.0%
GGTTTGAGCATAACAAGAGG+CGG + chr2_2:16639887-16639906 Msa0241190:CDS 45.0%
GTTTGAGCATAACAAGAGGC+GGG + chr2_2:16639888-16639907 Msa0241190:CDS 45.0%
TCATCATCTTCCGAGTGTGA+AGG - chr2_2:16639964-16639983 None:intergenic 45.0%
! GGTGGCAAAGCATTTGATTG+AGG + chr2_2:16640200-16640219 Msa0241190:CDS 45.0%
! GGCAAAGCATTTGATTGAGG+AGG + chr2_2:16640203-16640222 Msa0241190:CDS 45.0%
! ATTGAGGAGGGACCAGATTT+TGG + chr2_2:16640216-16640235 Msa0241190:CDS 45.0%
GAGTTATGCTGATGAGCAAG+AGG + chr2_2:16640290-16640309 Msa0241190:CDS 45.0%
TGAGCAAGAGGAGTTGAAAC+AGG + chr2_2:16640302-16640321 Msa0241190:CDS 45.0%
CTGAAAGCAGCAGAAAAGGA+TGG + chr2_2:16640330-16640349 Msa0241190:CDS 45.0%
CTCACCTTAAAGGAGAAGAC+AGG + chr2_2:16640372-16640391 Msa0241190:CDS 45.0%
CAAGGTAGAGAGTGAAGATG+AGG + chr2_2:16640401-16640420 Msa0241190:CDS 45.0%
TGAGATGGAAATTGAGAGGC+AGG + chr2_2:16640572-16640591 Msa0241190:CDS 45.0%
AGAGCAGAGAAAGAGCAAAG+AGG + chr2_2:16640695-16640714 Msa0241190:CDS 45.0%
AAAGAGCAAAGAGGAGAGAG+AGG + chr2_2:16640704-16640723 Msa0241190:CDS 45.0%
GAGAGAGGCAATACGACAAA+AGG + chr2_2:16640719-16640738 Msa0241190:CDS 45.0%
ACGACAAAAGGAAAGGGATG+AGG + chr2_2:16640731-16640750 Msa0241190:CDS 45.0%
TAGTGAGGGTGAAGAAGACA+TGG + chr2_2:16640965-16640984 Msa0241190:CDS 45.0%
TGGGATGAATGTGGATCTGA+TGG + chr2_2:16641038-16641057 Msa0241190:CDS 45.0%
GATGAATGTGGATCTGATGG+TGG + chr2_2:16641041-16641060 Msa0241190:CDS 45.0%
!!! TGGATCTGATGGTGGGTTTT+TGG + chr2_2:16641049-16641068 Msa0241190:CDS 45.0%
TGAAAAAGAGGACATTCCCG+AGG + chr2_2:16641142-16641161 Msa0241190:CDS 45.0%
GATTATGAGGACACAGTTGG+GGG + chr2_2:16641248-16641267 Msa0241190:CDS 45.0%
ATTATGAGGACACAGTTGGG+GGG + chr2_2:16641249-16641268 Msa0241190:CDS 45.0%
GTATCCAGGCCAAATCTGTT+AGG - chr2_2:16641311-16641330 None:intergenic 45.0%
ACTTGCTCCTTACCAAGAAG+AGG + chr2_2:16641388-16641407 Msa0241190:CDS 45.0%
ATCCTTCGTGCAGCAAGTTT+GGG + chr2_2:16641464-16641483 Msa0241190:CDS 45.0%
!! GACTTGCTAGAATCAGCCTT+GGG - chr2_2:16641623-16641642 None:intergenic 45.0%
!! TGACTTGCTAGAATCAGCCT+TGG - chr2_2:16641624-16641643 None:intergenic 45.0%
AAGCCAAGAGAAGGGAAAAC+AGG + chr2_2:16641708-16641727 Msa0241190:CDS 45.0%
AGCCAAGAGAAGGGAAAACA+GGG + chr2_2:16641709-16641728 Msa0241190:CDS 45.0%
AGCAGCAGAAAAGGATGGCT+TGG + chr2_2:16640335-16640354 Msa0241190:CDS 50.0%
GCAGCAGAAAAGGATGGCTT+GGG + chr2_2:16640336-16640355 Msa0241190:CDS 50.0%
! AAAGGATGGCTTGGGAGATG+AGG + chr2_2:16640344-16640363 Msa0241190:CDS 50.0%
GGAGAAGACAGGTGAAGACA+AGG + chr2_2:16640383-16640402 Msa0241190:CDS 50.0%
AAATCCAGGGGATAGAGTGC+TGG + chr2_2:16640620-16640639 Msa0241190:CDS 50.0%
! AATCCAGGGGATAGAGTGCT+GGG + chr2_2:16640621-16640640 Msa0241190:CDS 50.0%
AAAGAGGACATTCCCGAGGA+AGG + chr2_2:16641146-16641165 Msa0241190:CDS 50.0%
TTATGAGGACACAGTTGGGG+GGG + chr2_2:16641250-16641269 Msa0241190:CDS 50.0%
CATGCTGAAGATGAGGGCTA+AGG + chr2_2:16641439-16641458 Msa0241190:CDS 50.0%
GATCCTTCGTGCAGCAAGTT+TGG + chr2_2:16641463-16641482 Msa0241190:CDS 50.0%
!! TACCCAAACTTGCTGCACGA+AGG - chr2_2:16641469-16641488 None:intergenic 50.0%
! AGCCCTGTTTTCCCTTCTCT+TGG - chr2_2:16641714-16641733 None:intergenic 50.0%
AGCAGCAGAAAAGGATGGCT+TGG + chr2_2:16640335-16640354 Msa0241190:CDS 50.0%
GCAGCAGAAAAGGATGGCTT+GGG + chr2_2:16640336-16640355 Msa0241190:CDS 50.0%
! AAAGGATGGCTTGGGAGATG+AGG + chr2_2:16640344-16640363 Msa0241190:CDS 50.0%
GGAGAAGACAGGTGAAGACA+AGG + chr2_2:16640383-16640402 Msa0241190:CDS 50.0%
AAATCCAGGGGATAGAGTGC+TGG + chr2_2:16640620-16640639 Msa0241190:CDS 50.0%
! AATCCAGGGGATAGAGTGCT+GGG + chr2_2:16640621-16640640 Msa0241190:CDS 50.0%
AAAGAGGACATTCCCGAGGA+AGG + chr2_2:16641146-16641165 Msa0241190:CDS 50.0%
TTATGAGGACACAGTTGGGG+GGG + chr2_2:16641250-16641269 Msa0241190:CDS 50.0%
CATGCTGAAGATGAGGGCTA+AGG + chr2_2:16641439-16641458 Msa0241190:CDS 50.0%
GATCCTTCGTGCAGCAAGTT+TGG + chr2_2:16641463-16641482 Msa0241190:CDS 50.0%
!! TACCCAAACTTGCTGCACGA+AGG - chr2_2:16641469-16641488 None:intergenic 50.0%
! AGCCCTGTTTTCCCTTCTCT+TGG - chr2_2:16641714-16641733 None:intergenic 50.0%
TGAGCATAACAAGAGGCGGG+AGG + chr2_2:16639891-16639910 Msa0241190:CDS 55.0%
! GAGGAGGGACCAGATTTTGG+TGG + chr2_2:16640219-16640238 Msa0241190:CDS 55.0%
! AGTGCTGGGTCATGCTCGTA+AGG + chr2_2:16640635-16640654 Msa0241190:CDS 55.0%
GGTCATGCTCGTAAGGTGGA+GGG + chr2_2:16640642-16640661 Msa0241190:CDS 55.0%
TGCTCGTAAGGTGGAGGGTT+CGG + chr2_2:16640647-16640666 Msa0241190:CDS 55.0%
TTCCCGAGGAAGGTGGTAGT+CGG + chr2_2:16641156-16641175 Msa0241190:CDS 55.0%
TTCCGACTACCACCTTCCTC+GGG - chr2_2:16641161-16641180 None:intergenic 55.0%
CTTCCGACTACCACCTTCCT+CGG - chr2_2:16641162-16641181 None:intergenic 55.0%
AGGAAGGTGGTAGTCGGAAG+AGG + chr2_2:16641162-16641181 Msa0241190:CDS 55.0%
TGAGCATAACAAGAGGCGGG+AGG + chr2_2:16639891-16639910 Msa0241190:CDS 55.0%
! GAGGAGGGACCAGATTTTGG+TGG + chr2_2:16640219-16640238 Msa0241190:CDS 55.0%
! AGTGCTGGGTCATGCTCGTA+AGG + chr2_2:16640635-16640654 Msa0241190:CDS 55.0%
GGTCATGCTCGTAAGGTGGA+GGG + chr2_2:16640642-16640661 Msa0241190:CDS 55.0%
TGCTCGTAAGGTGGAGGGTT+CGG + chr2_2:16640647-16640666 Msa0241190:CDS 55.0%
TTCCCGAGGAAGGTGGTAGT+CGG + chr2_2:16641156-16641175 Msa0241190:CDS 55.0%
TTCCGACTACCACCTTCCTC+GGG - chr2_2:16641161-16641180 None:intergenic 55.0%
CTTCCGACTACCACCTTCCT+CGG - chr2_2:16641162-16641181 None:intergenic 55.0%
AGGAAGGTGGTAGTCGGAAG+AGG + chr2_2:16641162-16641181 Msa0241190:CDS 55.0%
TGACCCAGCACTCTATCCCC+TGG - chr2_2:16640627-16640646 None:intergenic 60.0%
GCTGGGTCATGCTCGTAAGG+TGG + chr2_2:16640638-16640657 Msa0241190:CDS 60.0%
GGGTCATGCTCGTAAGGTGG+AGG + chr2_2:16640641-16640660 Msa0241190:CDS 60.0%
!! GTAAGGTGGAGGGTTCGGTG+AGG + chr2_2:16640652-16640671 Msa0241190:CDS 60.0%
GAGGACATTCCCGAGGAAGG+TGG + chr2_2:16641149-16641168 Msa0241190:CDS 60.0%
TGACCCAGCACTCTATCCCC+TGG - chr2_2:16640627-16640646 None:intergenic 60.0%
GCTGGGTCATGCTCGTAAGG+TGG + chr2_2:16640638-16640657 Msa0241190:CDS 60.0%
GGGTCATGCTCGTAAGGTGG+AGG + chr2_2:16640641-16640660 Msa0241190:CDS 60.0%
!! GTAAGGTGGAGGGTTCGGTG+AGG + chr2_2:16640652-16640671 Msa0241190:CDS 60.0%
GAGGACATTCCCGAGGAAGG+TGG + chr2_2:16641149-16641168 Msa0241190:CDS 60.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 16639805 16641784 16639805 ID=Msa0241190;Name=Msa0241190
chr2_2 mRNA 16639805 16641784 16639805 ID=Msa0241190-mRNA-1;Parent=Msa0241190;Name=Msa0241190-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|-1|0|1|-1|1|1|0|659
chr2_2 exon 16639805 16641784 16639805 ID=Msa0241190-mRNA-1:exon:6835;Parent=Msa0241190-mRNA-1
chr2_2 CDS 16639805 16641784 16639805 ID=Msa0241190-mRNA-1:cds;Parent=Msa0241190-mRNA-1
Gene Sequence

>Msa0241190

ATGACTCAGAACATTTTTGATGGCAGTGATTCAGAAAATGAAGATATCTCAAATATCAAGATAGACGAGGAATATGCTCGTAGGTTTGAGCATAACAAGAGGCGGGAGGATCTCCAACGTTATGAAGAATTGAAAAAGAAAGGGGTTATTGGTTCACCTTCACACTCGGAAGATGATGAATCTGAGTCTGAATCTTCTGATGATGACGATGTGAACAATTTCAACTCTAAGAGTGATAAGGAATTCTTTGATGCTTTGATTAAGGTGAAGAAGAAAGATCCTGTTCTTAAGCAAAAGGATGTTAAGCTTTTTGAATCAGACCATAGTAGTGAAGATGAAAGTGATGATGAGAAGAGTAAAGATAAGGAGAAAAAGTCAATGTTTTTGAAGGATGTGGTGGCAAAGCATTTGATTGAGGAGGGACCAGATTTTGGTGGTAAAGAGGATGAAACAAATGAGAAAGGTATATCAAATGGTGGTAAGAAGAGTTATGCTGATGAGCAAGAGGAGTTGAAACAGGCTTTTCTGAAAGCAGCAGAAAAGGATGGCTTGGGAGATGAGGATTTTCTCACCTTAAAGGAGAAGACAGGTGAAGACAAGGTAGAGAGTGAAGATGAGGAATTTGAGGAGAAACTGGATGCATATTTTGATGATTCAAACGAAAATTCTTTATTTCTAAAAAACTATTTCAAGAACAAAATGTGGGTAGACAAGAATGCGGAGATTTTAAATGTTGGAGAGGAGGATTTGCAAGAGATTTCAGAAGATGAGATGGAAATTGAGAGGCAGGAAGAGTATGAAGTTAGTTTTCAGGAAAATCCAGGGGATAGAGTGCTGGGTCATGCTCGTAAGGTGGAGGGTTCGGTGAGGAAAAAGACAAACTCAAGGAAAGAGCAGAGAAAGAGCAAAGAGGAGAGAGAGGCAATACGACAAAAGGAAAGGGATGAGGAGTTGAAACATTTAAAGAATGTGAAGATGCAAGAGATACAAGAGAAGGTTAAAAAGATAAAGAAGATTGCAGGGATCAACGATGATGATATTATCCCTTTGTCTACTGCAGAATTAGAAAAGGAGTTTGACCCAAAGGAATATGACAGAATGATGAAGAAAGCATTTGATGCGAAGTATTATAACGAAGAGGATGTTGACCCTGATTTTTGTAGTGAGGGTGAAGAAGACATGGAGAAGCCAGATTTTGAAAAAGAGGATGATTTACTTGGGCTTCCTAAAGATTGGGATGAATGTGGATCTGATGGTGGGTTTTTGGCTGCAAGAGAAAAAGCATTGAAAGCAAAGATTGAAAATACTAGTGATGATGATCTCATGGAAGGAGAAACTGAAAAAGAGGACATTCCCGAGGAAGGTGGTAGTCGGAAGAGGAAGCGTAAAACTGCACTTTTGGAGAAAGCAAGACAAATGATGATGGATGAGTTTTATAAATTAGATTATGAGGACACAGTTGGGGGGGATCTGAAGACAAGATTCAAGTATACCAAAACAAAACCTAACAGATTTGGCCTGGATACTCCAGAGATACTATTGATCGATGATAAGGAACTGAATCAACATATTTCCTTGAAAAAACTTGCTCCTTACCAAGAAGAGGAATTGAAGCTTAGCAAAAAAAAAAGATACATGCTGAAGATGAGGGCTAAGGAGATCCTTCGTGCAGCAAGTTTGGGTAAGAAGAAAAAGAGGTTAAAGGTTGATTCTAGCAAATCAACTCAAGTTGATTCTAGCAAGTTAACTTCAAACAATGTTGTGGAGGAAGAAAAAGCAAACACAGCAAGTTTGGATAAGAAGAGAAATAAGAAGCCCAAGGCTGATTCTAGCAAGTCAACCTCATCAAACAGTTGTGTTGTGGAGGATGAAAAATCTAACACAGAAGAATCAAAATCAAGGAAAGCCAAGAGAAGGGAAAACAGGGCTAAATTAAAGTTGCCAGAGTCGAGACTTAAAGCATATGGAAAGACAACCTGA

Protein sequence

>Msa0241190

MTQNIFDGSDSENEDISNIKIDEEYARRFEHNKRREDLQRYEELKKKGVIGSPSHSEDDESESESSDDDDVNNFNSKSDKEFFDALIKVKKKDPVLKQKDVKLFESDHSSEDESDDEKSKDKEKKSMFLKDVVAKHLIEEGPDFGGKEDETNEKGISNGGKKSYADEQEELKQAFLKAAEKDGLGDEDFLTLKEKTGEDKVESEDEEFEEKLDAYFDDSNENSLFLKNYFKNKMWVDKNAEILNVGEEDLQEISEDEMEIERQEEYEVSFQENPGDRVLGHARKVEGSVRKKTNSRKEQRKSKEEREAIRQKERDEELKHLKNVKMQEIQEKVKKIKKIAGINDDDIIPLSTAELEKEFDPKEYDRMMKKAFDAKYYNEEDVDPDFCSEGEEDMEKPDFEKEDDLLGLPKDWDECGSDGGFLAAREKALKAKIENTSDDDLMEGETEKEDIPEEGGSRKRKRKTALLEKARQMMMDEFYKLDYEDTVGGDLKTRFKYTKTKPNRFGLDTPEILLIDDKELNQHISLKKLAPYQEEELKLSKKKRYMLKMRAKEILRAASLGKKKKRLKVDSSKSTQVDSSKLTSNNVVEEEKANTASLDKKRNKKPKADSSKSTSSNSCVVEDEKSNTEESKSRKAKRRENRAKLKLPESRLKAYGKTT*