Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1135390 | XP_024626042.2 | 91.365 | 498 | 9 | 1 | 1 | 464 | 1 | 498 | 0.0 | 890 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1135390 | sp|Q9FLD5|ASD_ARATH | 59.395 | 463 | 141 | 6 | 1 | 422 | 4 | 460 | 0.0 | 538 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1135390 | A0A396GZ58 | 91.365 | 498 | 9 | 1 | 1 | 464 | 1 | 498 | 0.0 | 890 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000190 | Msa1135390 | 0.813645 | 2.305360e-51 | -8.615850e-47 |
| Msa0003700 | Msa1135390 | 0.811940 | 5.444397e-51 | -8.615850e-47 |
| Msa0017510 | Msa1135390 | 0.833423 | 5.378330e-56 | -8.615850e-47 |
| Msa0024550 | Msa1135390 | 0.808474 | 3.042326e-50 | -8.615850e-47 |
| Msa0028420 | Msa1135390 | 0.805127 | 1.551074e-49 | -8.615850e-47 |
| Msa0069330 | Msa1135390 | 0.814609 | 1.412111e-51 | -8.615850e-47 |
| Msa0072370 | Msa1135390 | 0.801032 | 1.090218e-48 | -8.615850e-47 |
| Msa0081520 | Msa1135390 | 0.805556 | 1.261180e-49 | -8.615850e-47 |
| Msa0094850 | Msa1135390 | 0.818292 | 2.115020e-52 | -8.615850e-47 |
| Msa0104550 | Msa1135390 | 0.805441 | 1.332866e-49 | -8.615850e-47 |
| Msa0110970 | Msa1135390 | 0.831386 | 1.718838e-55 | -8.615850e-47 |
| Msa0120400 | Msa1135390 | 0.807930 | 3.973599e-50 | -8.615850e-47 |
| Msa0626450 | Msa1135390 | 0.808450 | 3.079218e-50 | -8.615850e-47 |
| Msa0626490 | Msa1135390 | 0.805822 | 1.109001e-49 | -8.615850e-47 |
| Msa0637560 | Msa1135390 | 0.802285 | 6.031810e-49 | -8.615850e-47 |
| Msa0637580 | Msa1135390 | 0.806411 | 8.332597e-50 | -8.615850e-47 |
| Msa0641210 | Msa1135390 | 0.800215 | 1.599729e-48 | -8.615850e-47 |
| Msa0643300 | Msa1135390 | 0.803146 | 4.006056e-49 | -8.615850e-47 |
| Msa0663300 | Msa1135390 | 0.800188 | 1.620037e-48 | -8.615850e-47 |
| Msa0664600 | Msa1135390 | 0.807632 | 4.597029e-50 | -8.615850e-47 |
| Msa0682330 | Msa1135390 | 0.800312 | 1.529034e-48 | -8.615850e-47 |
| Msa0683570 | Msa1135390 | 0.810875 | 9.273333e-51 | -8.615850e-47 |
| Msa0710800 | Msa1135390 | 0.805499 | 1.296296e-49 | -8.615850e-47 |
| Msa0727930 | Msa1135390 | 0.822106 | 2.829341e-53 | -8.615850e-47 |
| Msa0729720 | Msa1135390 | 0.802419 | 5.661876e-49 | -8.615850e-47 |
| Msa0738040 | Msa1135390 | 0.806748 | 7.074171e-50 | -8.615850e-47 |
| Msa0765240 | Msa1135390 | 0.813774 | 2.159191e-51 | -8.615850e-47 |
| Msa0769180 | Msa1135390 | 0.811476 | 6.868802e-51 | -8.615850e-47 |
| Msa0770080 | Msa1135390 | 0.804951 | 1.687791e-49 | -8.615850e-47 |
| Msa0785210 | Msa1135390 | 0.812047 | 5.159557e-51 | -8.615850e-47 |
| Msa0826130 | Msa1135390 | 0.806522 | 7.896237e-50 | -8.615850e-47 |
| Msa0828560 | Msa1135390 | 0.818428 | 1.970449e-52 | -8.615850e-47 |
| Msa0124060 | Msa1135390 | 0.800352 | 1.500288e-48 | -8.615850e-47 |
| Msa0157290 | Msa1135390 | 0.834348 | 3.156803e-56 | -8.615850e-47 |
| Msa0158600 | Msa1135390 | 0.810924 | 9.049281e-51 | -8.615850e-47 |
| Msa0168500 | Msa1135390 | 0.809145 | 2.186873e-50 | -8.615850e-47 |
| Msa0225100 | Msa1135390 | 0.800801 | 1.215567e-48 | -8.615850e-47 |
| Msa0378720 | Msa1135390 | 0.801830 | 7.480792e-49 | -8.615850e-47 |
| Msa0392420 | Msa1135390 | 0.833078 | 6.554883e-56 | -8.615850e-47 |
| Msa0392460 | Msa1135390 | 0.837488 | 5.046521e-57 | -8.615850e-47 |
| Msa0392490 | Msa1135390 | 0.842241 | 2.915642e-58 | -8.615850e-47 |
| Msa0392510 | Msa1135390 | 0.803234 | 3.842455e-49 | -8.615850e-47 |
| Msa0410500 | Msa1135390 | 0.809730 | 1.637600e-50 | -8.615850e-47 |
| Msa0410650 | Msa1135390 | 0.806614 | 7.553376e-50 | -8.615850e-47 |
| Msa0422850 | Msa1135390 | 0.803956 | 2.721934e-49 | -8.615850e-47 |
| Msa0422930 | Msa1135390 | 0.803478 | 3.419916e-49 | -8.615850e-47 |
| Msa0450720 | Msa1135390 | 0.808797 | 2.595345e-50 | -8.615850e-47 |
| Msa0461630 | Msa1135390 | 0.825676 | 4.117623e-54 | -8.615850e-47 |
| Msa0467430 | Msa1135390 | 0.827179 | 1.804651e-54 | -8.615850e-47 |
| Msa0475790 | Msa1135390 | 0.817917 | 2.571946e-52 | -8.615850e-47 |
| Msa1005870 | Msa1135390 | 0.894970 | 1.493411e-75 | -8.615850e-47 |
| Msa1019430 | Msa1135390 | 0.824426 | 8.124096e-54 | -8.615850e-47 |
| Msa1019470 | Msa1135390 | 0.820191 | 7.816167e-53 | -8.615850e-47 |
| Msa1020670 | Msa1135390 | 0.828499 | 8.691157e-55 | -8.615850e-47 |
| Msa1021570 | Msa1135390 | 0.802278 | 6.053497e-49 | -8.615850e-47 |
| Msa1043370 | Msa1135390 | 0.806194 | 9.259829e-50 | -8.615850e-47 |
| Msa1047980 | Msa1135390 | 0.884668 | 1.575628e-71 | -8.615850e-47 |
| Msa1051830 | Msa1135390 | 0.827464 | 1.542296e-54 | -8.615850e-47 |
| Msa1085200 | Msa1135390 | 0.801483 | 8.816151e-49 | -8.615850e-47 |
| Msa1092010 | Msa1135390 | 0.894954 | 1.515933e-75 | -8.615850e-47 |
| Msa1096970 | Msa1135390 | 0.815450 | 9.189416e-52 | -8.615850e-47 |
| Msa0253700 | Msa1135390 | 0.802411 | 5.683230e-49 | -8.615850e-47 |
| Msa0255090 | Msa1135390 | 0.806819 | 6.833703e-50 | -8.615850e-47 |
| Msa0259380 | Msa1135390 | 0.802330 | 5.906116e-49 | -8.615850e-47 |
| Msa0267110 | Msa1135390 | 0.814721 | 1.333916e-51 | -8.615850e-47 |
| Msa0292400 | Msa1135390 | 0.828533 | 8.526180e-55 | -8.615850e-47 |
| Msa0300690 | Msa1135390 | 0.819285 | 1.258461e-52 | -8.615850e-47 |
| Msa0317280 | Msa1135390 | 0.801551 | 8.537571e-49 | -8.615850e-47 |
| Msa0317340 | Msa1135390 | 0.808270 | 3.362763e-50 | -8.615850e-47 |
| Msa0338210 | Msa1135390 | 0.803442 | 3.479517e-49 | -8.615850e-47 |
| Msa0339500 | Msa1135390 | 0.810634 | 1.045697e-50 | -8.615850e-47 |
| Msa0344570 | Msa1135390 | 0.820965 | 5.189367e-53 | -8.615850e-47 |
| Msa0345330 | Msa1135390 | 0.804159 | 2.469607e-49 | -8.615850e-47 |
| Msa0363200 | Msa1135390 | 0.809551 | 1.789359e-50 | -8.615850e-47 |
| Msa1124110 | Msa1135390 | 0.811572 | 6.545740e-51 | -8.615850e-47 |
| Msa1125000 | Msa1135390 | 0.820837 | 5.554556e-53 | -8.615850e-47 |
| Msa1135390 | Msa1140210 | 0.833927 | 4.025048e-56 | -8.615850e-47 |
| Msa1135390 | Msa1151910 | 0.801703 | 7.946649e-49 | -8.615850e-47 |
| Msa1135390 | Msa1167280 | 0.808894 | 2.474182e-50 | -8.615850e-47 |
| Msa1135390 | Msa1183120 | 0.800358 | 1.496021e-48 | -8.615850e-47 |
| Msa1135390 | Msa1192090 | 0.811214 | 7.831226e-51 | -8.615850e-47 |
| Msa1135390 | Msa1196440 | 0.810682 | 1.021031e-50 | -8.615850e-47 |
| Msa1135390 | Msa1199570 | 0.805867 | 1.084656e-49 | -8.615850e-47 |
| Msa1135390 | Msa1209460 | 0.804788 | 1.825527e-49 | -8.615850e-47 |
| Msa1135390 | Msa1218550 | 0.814022 | 1.903814e-51 | -8.615850e-47 |
| Msa1135390 | Msa1271990 | 0.805063 | 1.599417e-49 | -8.615850e-47 |
| Msa1135390 | Msa1303250 | 0.811151 | 8.081020e-51 | -8.615850e-47 |
| Msa1135390 | Msa1328710 | 0.814083 | 1.845942e-51 | -8.615850e-47 |
| Msa1135390 | Msa1346370 | 0.807783 | 4.271018e-50 | -8.615850e-47 |
| Msa1135390 | Msa1366340 | 0.803230 | 3.849202e-49 | -8.615850e-47 |
| Msa1135390 | Msa1374040 | 0.809572 | 1.770637e-50 | -8.615850e-47 |
| Msa1135390 | Msa1374550 | 0.858645 | 7.146559e-63 | -8.615850e-47 |
| Msa1135390 | Msa1430240 | 0.809642 | 1.710315e-50 | -8.615850e-47 |
| Msa1135390 | Msa1436570 | 0.815868 | 7.414526e-52 | -8.615850e-47 |
| Msa1135390 | Msa1443110 | 0.801099 | 1.056210e-48 | -8.615850e-47 |
| Msa1135390 | Msa1445190 | 0.815614 | 8.448457e-52 | -8.615850e-47 |
| Msa1135390 | Msa1446810 | 0.802906 | 4.491938e-49 | -8.615850e-47 |
| Msa1135390 | Msa1465300 | 0.810961 | 8.882993e-51 | -8.615850e-47 |
| Msa0487570 | Msa1135390 | 0.836018 | 1.196385e-56 | -8.615850e-47 |
| Msa0487630 | Msa1135390 | 0.851337 | 9.478922e-61 | -8.615850e-47 |
| Msa0498060 | Msa1135390 | 0.800791 | 1.221041e-48 | -8.615850e-47 |
| Msa0507680 | Msa1135390 | 0.801557 | 8.512738e-49 | -8.615850e-47 |
| Msa0513160 | Msa1135390 | 0.812996 | 3.200341e-51 | -8.615850e-47 |
| Msa0527550 | Msa1135390 | 0.809648 | 1.705175e-50 | -8.615850e-47 |
| Msa0527860 | Msa1135390 | 0.817886 | 2.613370e-52 | -8.615850e-47 |
| Msa0574890 | Msa1135390 | 0.824183 | 9.267954e-54 | -8.615850e-47 |
| Msa0589510 | Msa1135390 | 0.805991 | 1.021879e-49 | -8.615850e-47 |
| Msa0597790 | Msa1135390 | 0.815674 | 8.192990e-52 | -8.615850e-47 |
| Msa0844560 | Msa1135390 | 0.805436 | 1.336244e-49 | -8.615850e-47 |
| Msa0861510 | Msa1135390 | 0.808891 | 2.478455e-50 | -8.615850e-47 |
| Msa0861600 | Msa1135390 | 0.801989 | 6.941415e-49 | -8.615850e-47 |
| Msa0861870 | Msa1135390 | 0.806226 | 9.117285e-50 | -8.615850e-47 |
| Msa0880140 | Msa1135390 | 0.829506 | 4.956216e-55 | -8.615850e-47 |
| Msa0880780 | Msa1135390 | 0.809633 | 1.718387e-50 | -8.615850e-47 |
| Msa0896970 | Msa1135390 | 0.831483 | 1.627320e-55 | -8.615850e-47 |
| Msa0930780 | Msa1135390 | 0.811221 | 7.803054e-51 | -8.615850e-47 |
| Msa0936340 | Msa1135390 | 0.805099 | 1.571795e-49 | -8.615850e-47 |
| Msa0945110 | Msa1135390 | 0.824273 | 8.826863e-54 | -8.615850e-47 |
| Msa0967380 | Msa1135390 | 0.808444 | 3.087436e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1135390 | MtrunA17_Chr7g0215951 | 91.365 | 498 | 9 | 1 | 1 | 464 | 1 | 498 | 0.0 | 890 |
| Msa1135390 | MtrunA17_Chr6g0452391 | 61.987 | 463 | 133 | 4 | 1 | 426 | 3 | 459 | 0.0 | 573 |
| Msa1135390 | MtrunA17_Chr6g0452371 | 62.419 | 463 | 131 | 4 | 1 | 426 | 5 | 461 | 0.0 | 572 |
| Msa1135390 | MtrunA17_Chr4g0059811 | 54.941 | 506 | 182 | 4 | 1 | 461 | 6 | 510 | 0.0 | 550 |
| Msa1135390 | MtrunA17_Chr1g0155131 | 57.906 | 487 | 145 | 9 | 2 | 451 | 4 | 467 | 0.0 | 543 |
| Msa1135390 | MtrunA17_Chr6g0452451 | 59.829 | 468 | 141 | 5 | 1 | 425 | 5 | 468 | 0.0 | 536 |
| Msa1135390 | MtrunA17_Chr2g0292561 | 55.439 | 478 | 158 | 6 | 2 | 443 | 7 | 465 | 0.0 | 526 |
| Msa1135390 | MtrunA17_Chr6g0452401 | 59.513 | 452 | 133 | 6 | 21 | 426 | 1 | 448 | 4.48e-180 | 512 |
| Msa1135390 | MtrunA17_Chr6g0466811 | 58.352 | 449 | 139 | 7 | 8 | 426 | 21 | 451 | 1.27e-177 | 507 |
| Msa1135390 | MtrunA17_Chr1g0155121 | 49.138 | 464 | 193 | 4 | 1 | 425 | 1 | 460 | 1.01e-155 | 451 |
| Msa1135390 | MtrunA17_Chr6g0452411 | 59.459 | 370 | 102 | 5 | 101 | 426 | 1 | 366 | 9.40e-142 | 412 |
| Msa1135390 | MtrunA17_Chr6g0452361 | 61.149 | 296 | 78 | 3 | 175 | 455 | 1 | 274 | 1.71e-118 | 348 |
| Msa1135390 | MtrunA17_Chr6g0452481 | 62.409 | 274 | 81 | 4 | 154 | 426 | 2 | 254 | 1.06e-110 | 329 |
| Msa1135390 | MtrunA17_Chr4g0072491 | 40.659 | 455 | 207 | 10 | 1 | 406 | 1 | 441 | 5.77e-107 | 327 |
| Msa1135390 | MtrunA17_Chr5g0404651 | 37.681 | 483 | 220 | 10 | 2 | 438 | 11 | 458 | 7.40e-103 | 316 |
| Msa1135390 | MtrunA17_Chr2g0308991 | 37.365 | 463 | 239 | 9 | 1 | 430 | 4 | 448 | 4.52e-101 | 311 |
| Msa1135390 | MtrunA17_Chr8g0372701 | 36.768 | 495 | 232 | 9 | 9 | 453 | 28 | 491 | 4.06e-97 | 301 |
| Msa1135390 | MtrunA17_Chr2g0315921 | 36.596 | 470 | 222 | 10 | 10 | 437 | 14 | 449 | 2.05e-96 | 297 |
| Msa1135390 | MtrunA17_Chr2g0315911 | 38.877 | 463 | 210 | 12 | 10 | 434 | 16 | 443 | 3.54e-96 | 297 |
| Msa1135390 | MtrunA17_Chr2g0315991 | 37.022 | 497 | 219 | 12 | 8 | 453 | 13 | 466 | 1.14e-95 | 296 |
| Msa1135390 | MtrunA17_Chr2g0315971 | 37.787 | 479 | 213 | 13 | 8 | 443 | 7 | 443 | 1.00e-92 | 296 |
| Msa1135390 | MtrunA17_Chr2g0315971 | 50.190 | 263 | 105 | 3 | 164 | 426 | 467 | 703 | 5.68e-81 | 265 |
| Msa1135390 | MtrunA17_Chr2g0315981 | 36.345 | 487 | 228 | 12 | 8 | 453 | 7 | 452 | 7.38e-91 | 283 |
| Msa1135390 | MtrunA17_Chr2g0316041 | 38.051 | 431 | 190 | 10 | 61 | 447 | 1 | 398 | 1.53e-88 | 277 |
| Msa1135390 | MtrunA17_Chr5g0404661 | 33.544 | 474 | 259 | 7 | 5 | 438 | 25 | 482 | 4.26e-81 | 259 |
| Msa1135390 | MtrunA17_Chr3g0134831 | 45.421 | 273 | 134 | 3 | 156 | 426 | 28 | 287 | 9.62e-80 | 249 |
| Msa1135390 | MtrunA17_Chr2g0316021 | 32.553 | 470 | 202 | 11 | 8 | 435 | 7 | 403 | 9.00e-72 | 233 |
| Msa1135390 | MtrunA17_Chr7g0276031 | 32.964 | 361 | 166 | 9 | 93 | 426 | 94 | 405 | 2.18e-59 | 202 |
| Msa1135390 | MtrunA17_Chr8g0346371 | 29.103 | 457 | 244 | 11 | 39 | 451 | 38 | 458 | 3.78e-58 | 199 |
| Msa1135390 | MtrunA17_Chr3g0127381 | 30.854 | 363 | 177 | 7 | 95 | 426 | 95 | 414 | 3.80e-56 | 194 |
| Msa1135390 | MtrunA17_Chr1g0148871 | 64.885 | 131 | 43 | 1 | 298 | 425 | 3 | 133 | 7.44e-51 | 170 |
| Msa1135390 | MtrunA17_Chr6g0452351 | 53.913 | 115 | 52 | 1 | 7 | 120 | 20 | 134 | 7.13e-36 | 129 |
| Msa1135390 | MtrunA17_Chr5g0404671 | 50.926 | 108 | 48 | 2 | 321 | 426 | 1 | 105 | 4.03e-30 | 115 |
| Msa1135390 | MtrunA17_Chr1g0211521 | 54.455 | 101 | 43 | 2 | 354 | 451 | 5 | 105 | 1.14e-24 | 98.6 |
| Msa1135390 | MtrunA17_Chr5g0404681 | 52.703 | 74 | 35 | 0 | 156 | 229 | 79 | 152 | 4.45e-21 | 89.7 |
| Msa1135390 | MtrunA17_Chr5g0404691 | 36.571 | 175 | 77 | 6 | 254 | 426 | 7 | 149 | 9.74e-21 | 89.0 |
| Msa1135390 | MtrunA17_Chr2g0315961 | 55.769 | 52 | 23 | 0 | 354 | 405 | 1 | 52 | 6.02e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1135390 | AT5G40010.1 | 59.395 | 463 | 141 | 6 | 1 | 422 | 4 | 460 | 0.0 | 538 |
| Msa1135390 | AT3G28580.1 | 57.609 | 460 | 149 | 6 | 1 | 422 | 4 | 455 | 2.74e-180 | 514 |
| Msa1135390 | AT3G28580.2 | 53.913 | 460 | 144 | 7 | 1 | 422 | 4 | 433 | 1.45e-163 | 471 |
| Msa1135390 | AT3G28510.1 | 52.814 | 462 | 175 | 5 | 4 | 429 | 7 | 461 | 3.58e-163 | 471 |
| Msa1135390 | AT3G28610.1 | 50.518 | 483 | 184 | 11 | 8 | 451 | 6 | 472 | 3.31e-156 | 452 |
| Msa1135390 | AT3G28600.1 | 49.895 | 475 | 176 | 8 | 8 | 440 | 7 | 461 | 4.70e-154 | 446 |
| Msa1135390 | AT3G28600.2 | 51.786 | 448 | 169 | 7 | 8 | 440 | 7 | 422 | 9.99e-154 | 444 |
| Msa1135390 | AT3G28540.2 | 50.993 | 453 | 186 | 4 | 4 | 424 | 7 | 455 | 2.22e-153 | 446 |
| Msa1135390 | AT3G28540.1 | 50.993 | 453 | 186 | 4 | 4 | 424 | 7 | 455 | 2.79e-153 | 446 |
| Msa1135390 | AT5G40000.1 | 47.193 | 481 | 192 | 12 | 1 | 440 | 4 | 463 | 6.61e-143 | 417 |
| Msa1135390 | AT3G28520.1 | 47.708 | 480 | 195 | 6 | 12 | 443 | 1 | 472 | 1.77e-138 | 407 |
| Msa1135390 | AT3G28570.2 | 45.798 | 476 | 184 | 10 | 6 | 438 | 14 | 458 | 5.48e-134 | 394 |
| Msa1135390 | AT3G28570.1 | 45.798 | 476 | 184 | 10 | 6 | 438 | 7 | 451 | 6.04e-134 | 394 |
| Msa1135390 | AT5G57480.1 | 36.401 | 489 | 244 | 10 | 1 | 439 | 1 | 472 | 2.62e-104 | 320 |
| Msa1135390 | AT4G25835.1 | 37.342 | 474 | 242 | 10 | 1 | 434 | 1 | 459 | 2.12e-102 | 315 |
| Msa1135390 | AT3G50930.1 | 37.860 | 486 | 227 | 10 | 16 | 451 | 73 | 533 | 6.00e-102 | 316 |
| Msa1135390 | AT3G50940.1 | 37.029 | 451 | 206 | 8 | 20 | 429 | 31 | 444 | 8.58e-99 | 304 |
| Msa1135390 | AT4G30250.1 | 35.892 | 482 | 246 | 10 | 1 | 434 | 1 | 467 | 3.02e-96 | 300 |
| Msa1135390 | AT4G30250.2 | 35.892 | 482 | 246 | 10 | 1 | 434 | 3 | 469 | 3.02e-96 | 300 |
| Msa1135390 | AT4G05380.1 | 36.966 | 468 | 245 | 8 | 1 | 438 | 12 | 459 | 1.29e-94 | 293 |
| Msa1135390 | AT2G18193.1 | 35.197 | 483 | 250 | 9 | 9 | 458 | 19 | 471 | 4.61e-93 | 291 |
| Msa1135390 | AT1G43910.1 | 37.580 | 471 | 241 | 11 | 1 | 434 | 1 | 455 | 2.32e-87 | 275 |
| Msa1135390 | AT5G17740.1 | 33.473 | 478 | 255 | 11 | 2 | 440 | 11 | 464 | 4.62e-87 | 276 |
| Msa1135390 | AT5G17760.1 | 46.263 | 281 | 123 | 3 | 158 | 434 | 206 | 462 | 1.22e-86 | 274 |
| Msa1135390 | AT5G17730.1 | 33.049 | 469 | 240 | 8 | 6 | 431 | 11 | 448 | 5.45e-84 | 266 |
| Msa1135390 | AT2G18190.1 | 33.689 | 469 | 251 | 8 | 2 | 437 | 13 | 454 | 4.51e-83 | 265 |
| Msa1135390 | AT5G17750.1 | 37.778 | 360 | 163 | 7 | 71 | 392 | 55 | 391 | 5.22e-73 | 235 |
| Msa1135390 | AT2G46620.1 | 31.209 | 455 | 245 | 9 | 1 | 426 | 1 | 416 | 5.76e-69 | 228 |
| Msa1135390 | AT5G17760.2 | 52.991 | 117 | 55 | 0 | 158 | 274 | 206 | 322 | 2.57e-43 | 156 |
| Msa1135390 | AT3G29800.1 | 31.000 | 300 | 150 | 7 | 129 | 423 | 130 | 377 | 1.49e-40 | 151 |
| Msa1135390 | AT3G28560.1 | 34.579 | 214 | 94 | 5 | 4 | 179 | 7 | 212 | 4.76e-29 | 115 |
| Msa1135390 | AT4G05340.1 | 50.000 | 92 | 39 | 1 | 294 | 378 | 2 | 93 | 2.63e-20 | 85.9 |
Find 67 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACGCGGTTATTTACTTTA+TGG | 0.206027 | 7_4:-2556392 | Msa1135390:CDS |
| GGTTCTTGTTAAGAATTATT+TGG | 0.226983 | 7_4:-2555898 | Msa1135390:CDS |
| GACTTCAGCTTTGAGTCTTT+TGG | 0.239776 | 7_4:+2556861 | None:intergenic |
| CATGATTTGTTTGATGAAAT+TGG | 0.246773 | 7_4:-2555864 | Msa1135390:CDS |
| TTTCATTGTGACAGTGAAAA+AGG | 0.267935 | 7_4:-2555646 | Msa1135390:CDS |
| GTCTTTCACCTGAGAATTCA+TGG | 0.273148 | 7_4:+2556947 | None:intergenic |
| GAACATTATGGTGGCTAGTA+TGG | 0.297567 | 7_4:+2557077 | None:intergenic |
| AGCTAAGTATGAGTGAACTA+TGG | 0.321937 | 7_4:-2557113 | None:intergenic |
| AACTTGATCCTGCTCTTATT+AGG | 0.329188 | 7_4:-2555977 | Msa1135390:CDS |
| AGAATTCATGGAAAGTGATT+TGG | 0.342817 | 7_4:+2556959 | None:intergenic |
| AATAGTAAGGTAACTTTATC+CGG | 0.351589 | 7_4:-2556080 | Msa1135390:CDS |
| ATAGTAGATTTACCTGTTCC+TGG | 0.352380 | 7_4:+2556365 | None:intergenic |
| GTGGAAGATGTGAAGGAAAA+TGG | 0.360536 | 7_4:-2555669 | Msa1135390:CDS |
| ATCAATAAAATTCAATAAAC+CGG | 0.362700 | 7_4:+2556061 | None:intergenic |
| TATGGCATACATGAACATTA+TGG | 0.377040 | 7_4:+2557065 | None:intergenic |
| ATGGTTACAAACAATCAAAA+TGG | 0.386452 | 7_4:-2556550 | Msa1135390:CDS |
| TCTTGAATTAACCGCGGTTA+AGG | 0.395319 | 7_4:-2556300 | Msa1135390:CDS |
| TAACCATACCAACCACTACT+TGG | 0.406082 | 7_4:+2556566 | None:intergenic |
| AATTTCAAGGTGTTAAGCTT+TGG | 0.409358 | 7_4:-2556777 | Msa1135390:CDS |
| CTTTATGGTCCTCCAGGAAC+AGG | 0.413204 | 7_4:-2556377 | Msa1135390:CDS |
| TGGAAAGTGATTTGGATGTA+AGG | 0.435023 | 7_4:+2556967 | None:intergenic |
| ATCACTTTCCATGAATTCTC+AGG | 0.451974 | 7_4:-2556955 | Msa1135390:CDS |
| TGAGGAAGAAGACTCATTCA+TGG | 0.460140 | 7_4:-2556156 | Msa1135390:CDS |
| TTTGAAGTTTAGAAATGGTA+AGG | 0.467899 | 7_4:-2556444 | Msa1135390:CDS |
| TTCAAGGTGTTAAGCTTTGG+TGG | 0.472961 | 7_4:-2556774 | Msa1135390:CDS |
| TGATGAAATTGGTGATTTGT+TGG | 0.479236 | 7_4:-2555853 | Msa1135390:CDS |
| GAAGTCACAGATGAATTTCA+AGG | 0.493727 | 7_4:-2556790 | Msa1135390:CDS |
| TATTTACTTTATGGTCCTCC+AGG | 0.495610 | 7_4:-2556383 | Msa1135390:CDS |
| AATCCAAGTAGTGGTTGGTA+TGG | 0.518519 | 7_4:-2556569 | Msa1135390:CDS |
| AAATTCTCAGCAACATCAGC+AGG | 0.526229 | 7_4:+2555813 | None:intergenic |
| AATTAACAACTTTCTTAACT+CGG | 0.528092 | 7_4:+2556271 | None:intergenic |
| CTTCCTGTCCTAATAAGAGC+AGG | 0.535295 | 7_4:+2555969 | None:intergenic |
| GGAAAGTGATTTGGATGTAA+GGG | 0.538609 | 7_4:+2556968 | None:intergenic |
| CAAATAATCCAAGTAGTGGT+TGG | 0.539028 | 7_4:-2556574 | Msa1135390:CDS |
| ATCTACTATGATAGCCGCTA+TGG | 0.541351 | 7_4:-2556351 | Msa1135390:CDS |
| AAAAGATAGTCAAAATCCAT+TGG | 0.544634 | 7_4:-2556836 | Msa1135390:CDS |
| GATCCTGCTCTTATTAGGAC+AGG | 0.549073 | 7_4:-2555972 | Msa1135390:CDS |
| ATCGGTAAGGCTTGGAAACG+CGG | 0.549524 | 7_4:-2556407 | Msa1135390:CDS |
| TCAAGGTGTTAAGCTTTGGT+GGG | 0.552548 | 7_4:-2556773 | Msa1135390:CDS |
| ACATCTTCATTCACAGACTT+AGG | 0.556783 | 7_4:+2555786 | None:intergenic |
| AAAAGGATATAGTTCTGTGA+TGG | 0.559391 | 7_4:-2555629 | None:intergenic |
| TCATCAATGCTAAGAACCAA+TGG | 0.561072 | 7_4:+2556820 | None:intergenic |
| ACAAGAAGTAGAAGAAGACA+AGG | 0.563981 | 7_4:-2555709 | Msa1135390:CDS |
| TATACAAATAATCCAAGTAG+TGG | 0.565102 | 7_4:-2556578 | Msa1135390:CDS |
| GCTAAGTATGAGTGAACTAT+GGG | 0.567082 | 7_4:-2557112 | None:intergenic |
| GCAAGTGTCTCAAAAGTCGC+AGG | 0.578088 | 7_4:+2556506 | None:intergenic |
| AGACTATCACGAAATGAAGA+TGG | 0.578620 | 7_4:+2557027 | None:intergenic |
| GGTCCGCGTGTGGAGGAGAG+AGG | 0.586140 | 7_4:-2556031 | Msa1135390:CDS |
| ATTTGATTCAAGCACTTGAG+AGG | 0.587639 | 7_4:-2555746 | Msa1135390:CDS |
| CTGCTCTTATTAGGACAGGA+AGG | 0.593973 | 7_4:-2555968 | Msa1135390:CDS |
| TCTTATTAGGACAGGAAGGA+TGG | 0.597653 | 7_4:-2555964 | Msa1135390:CDS |
| GAAGACAAGGAAGATAGTGT+AGG | 0.600054 | 7_4:-2555696 | Msa1135390:CDS |
| TCAAGCACTTGAGAGGAAGA+AGG | 0.600486 | 7_4:-2555739 | Msa1135390:CDS |
| AAAATTGAAACTTCATCACA+TGG | 0.601556 | 7_4:-2556742 | Msa1135390:intron |
| AGTGAACTATGGGCACAACT+AGG | 0.614578 | 7_4:-2557102 | Msa1135390:CDS |
| AGGAACTGTGGAAGATGTGA+AGG | 0.615776 | 7_4:-2555676 | Msa1135390:CDS |
| GGAAGATAGTGTAGGAACTG+TGG | 0.624422 | 7_4:-2555688 | Msa1135390:CDS |
| GATGGAATTTGGTCCGCGTG+TGG | 0.633363 | 7_4:-2556041 | Msa1135390:CDS |
| TTGCAATGAGAAATAGACAA+AGG | 0.635194 | 7_4:-2556607 | Msa1135390:CDS |
| GGAATTTGGTCCGCGTGTGG+AGG | 0.645589 | 7_4:-2556038 | Msa1135390:CDS |
| AGCACTTGAGAGGAAGAAGG+TGG | 0.649097 | 7_4:-2555736 | Msa1135390:CDS |
| AATCCTCTCTCCTCCACACG+CGG | 0.650999 | 7_4:+2556028 | None:intergenic |
| GGCATACATGAACATTATGG+TGG | 0.652895 | 7_4:+2557068 | None:intergenic |
| CTCGGTATTATCCTTAACCG+CGG | 0.675125 | 7_4:+2556289 | None:intergenic |
| GTTCATGAAATTCGCCATAG+CGG | 0.682175 | 7_4:+2556337 | None:intergenic |
| GTAGATTTACCTGTTCCTGG+AGG | 0.701492 | 7_4:+2556368 | None:intergenic |
| TTATGATCTTGAATTAACCG+CGG | 0.736452 | 7_4:-2556306 | Msa1135390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAAAAATGAAAAAAATG+AGG | - | chr7_4:2556563-2556582 | Msa1135390:CDS | 10.0% |
| !! | TAATAAAAATGAAAAAAATG+AGG | - | chr7_4:2556563-2556582 | Msa1135390:CDS | 10.0% |
| !! | AACAAAAAGATTATTATCAT+AGG | - | chr7_4:2556604-2556623 | Msa1135390:CDS | 15.0% |
| !! | GAATAATAGTAAAAATAGTA+AGG | - | chr7_4:2556644-2556663 | Msa1135390:intron | 15.0% |
| !! | ATCAATAAAATTCAATAAAC+CGG | + | chr7_4:2556679-2556698 | None:intergenic | 15.0% |
| !! | AACAAAAAGATTATTATCAT+AGG | - | chr7_4:2556604-2556623 | Msa1135390:CDS | 15.0% |
| !! | GAATAATAGTAAAAATAGTA+AGG | - | chr7_4:2556644-2556663 | Msa1135390:intron | 15.0% |
| !! | ATCAATAAAATTCAATAAAC+CGG | + | chr7_4:2556679-2556698 | None:intergenic | 15.0% |
| !! | AATTAACAACTTTCTTAACT+CGG | + | chr7_4:2556469-2556488 | None:intergenic | 20.0% |
| !! | TTATTATCATAGGAAAAAAG+AGG | - | chr7_4:2556614-2556633 | Msa1135390:CDS | 20.0% |
| !!! | GGTTTATTGAATTTTATTGA+TGG | - | chr7_4:2556678-2556697 | Msa1135390:intron | 20.0% |
| !!! | TGAATTTTATTGATGGAATT+TGG | - | chr7_4:2556685-2556704 | Msa1135390:intron | 20.0% |
| !! | AATTAACAACTTTCTTAACT+CGG | + | chr7_4:2556469-2556488 | None:intergenic | 20.0% |
| !! | TTATTATCATAGGAAAAAAG+AGG | - | chr7_4:2556614-2556633 | Msa1135390:CDS | 20.0% |
| !!! | GGTTTATTGAATTTTATTGA+TGG | - | chr7_4:2556678-2556697 | Msa1135390:intron | 20.0% |
| !!! | TGAATTTTATTGATGGAATT+TGG | - | chr7_4:2556685-2556704 | Msa1135390:intron | 20.0% |
| ! | TGGTAAAAAACGTTCAATTA+TGG | + | chr7_4:2555693-2555712 | None:intergenic | 25.0% |
| ! | AAAAGATAGTCAAAATCCAT+TGG | - | chr7_4:2555901-2555920 | Msa1135390:CDS | 25.0% |
| ! | AAAATTGAAACTTCATCACA+TGG | - | chr7_4:2555995-2556014 | Msa1135390:CDS | 25.0% |
| ! | TATACAAATAATCCAAGTAG+TGG | - | chr7_4:2556159-2556178 | Msa1135390:CDS | 25.0% |
| ! | ATGGTTACAAACAATCAAAA+TGG | - | chr7_4:2556187-2556206 | Msa1135390:CDS | 25.0% |
| !!! | GATCTTTTGAAGTTTAGAAA+TGG | - | chr7_4:2556288-2556307 | Msa1135390:CDS | 25.0% |
| !! | TTTGAAGTTTAGAAATGGTA+AGG | - | chr7_4:2556293-2556312 | Msa1135390:CDS | 25.0% |
| ! | AAGGACTATTATGCAAAAAT+CGG | - | chr7_4:2556312-2556331 | Msa1135390:CDS | 25.0% |
| !! | CATTTTTATTAATCTTCCTC+TGG | + | chr7_4:2556554-2556573 | None:intergenic | 25.0% |
| ! | AATAGTAAGGTAACTTTATC+CGG | - | chr7_4:2556657-2556676 | Msa1135390:intron | 25.0% |
| !!! | TTGTTGTTTTGAAGCTTTTA+AGG | - | chr7_4:2556818-2556837 | Msa1135390:CDS | 25.0% |
| ! | GGTTCTTGTTAAGAATTATT+TGG | - | chr7_4:2556839-2556858 | Msa1135390:CDS | 25.0% |
| !!! | CATGATTTGTTTGATGAAAT+TGG | - | chr7_4:2556873-2556892 | Msa1135390:CDS | 25.0% |
| ! | TGGTAAAAAACGTTCAATTA+TGG | + | chr7_4:2555693-2555712 | None:intergenic | 25.0% |
| ! | AAAAGATAGTCAAAATCCAT+TGG | - | chr7_4:2555901-2555920 | Msa1135390:CDS | 25.0% |
| ! | AAAATTGAAACTTCATCACA+TGG | - | chr7_4:2555995-2556014 | Msa1135390:CDS | 25.0% |
| ! | TATACAAATAATCCAAGTAG+TGG | - | chr7_4:2556159-2556178 | Msa1135390:CDS | 25.0% |
| ! | ATGGTTACAAACAATCAAAA+TGG | - | chr7_4:2556187-2556206 | Msa1135390:CDS | 25.0% |
| !!! | GATCTTTTGAAGTTTAGAAA+TGG | - | chr7_4:2556288-2556307 | Msa1135390:CDS | 25.0% |
| !! | TTTGAAGTTTAGAAATGGTA+AGG | - | chr7_4:2556293-2556312 | Msa1135390:CDS | 25.0% |
| ! | AAGGACTATTATGCAAAAAT+CGG | - | chr7_4:2556312-2556331 | Msa1135390:CDS | 25.0% |
| !! | CATTTTTATTAATCTTCCTC+TGG | + | chr7_4:2556554-2556573 | None:intergenic | 25.0% |
| ! | AATAGTAAGGTAACTTTATC+CGG | - | chr7_4:2556657-2556676 | Msa1135390:intron | 25.0% |
| !!! | TTGTTGTTTTGAAGCTTTTA+AGG | - | chr7_4:2556818-2556837 | Msa1135390:CDS | 25.0% |
| ! | GGTTCTTGTTAAGAATTATT+TGG | - | chr7_4:2556839-2556858 | Msa1135390:CDS | 25.0% |
| !!! | CATGATTTGTTTGATGAAAT+TGG | - | chr7_4:2556873-2556892 | Msa1135390:CDS | 25.0% |
| TATGGCATACATGAACATTA+TGG | + | chr7_4:2555675-2555694 | None:intergenic | 30.0% | |
| AGAATTCATGGAAAGTGATT+TGG | + | chr7_4:2555781-2555800 | None:intergenic | 30.0% | |
| ! | AATTTCAAGGTGTTAAGCTT+TGG | - | chr7_4:2555960-2555979 | Msa1135390:CDS | 30.0% |
| !!! | ATCAAGCATGTTTTGAAAGA+AGG | - | chr7_4:2556099-2556118 | Msa1135390:CDS | 30.0% |
| !!! | TCAAGCATGTTTTGAAAGAA+GGG | - | chr7_4:2556100-2556119 | Msa1135390:CDS | 30.0% |
| TTGCAATGAGAAATAGACAA+AGG | - | chr7_4:2556130-2556149 | Msa1135390:CDS | 30.0% | |
| CTATTATGCAAAAATCGGTA+AGG | - | chr7_4:2556317-2556336 | Msa1135390:CDS | 30.0% | |
| AAACGCGGTTATTTACTTTA+TGG | - | chr7_4:2556345-2556364 | Msa1135390:CDS | 30.0% | |
| TTATGATCTTGAATTAACCG+CGG | - | chr7_4:2556431-2556450 | Msa1135390:CDS | 30.0% | |
| ! | AATTTTCACGACGAATTTTG+TGG | - | chr7_4:2556734-2556753 | Msa1135390:intron | 30.0% |
| ! | TGATGAAATTGGTGATTTGT+TGG | - | chr7_4:2556884-2556903 | Msa1135390:CDS | 30.0% |
| TTTCATTGTGACAGTGAAAA+AGG | - | chr7_4:2557091-2557110 | Msa1135390:CDS | 30.0% | |
| TATGGCATACATGAACATTA+TGG | + | chr7_4:2555675-2555694 | None:intergenic | 30.0% | |
| AGAATTCATGGAAAGTGATT+TGG | + | chr7_4:2555781-2555800 | None:intergenic | 30.0% | |
| ! | AATTTCAAGGTGTTAAGCTT+TGG | - | chr7_4:2555960-2555979 | Msa1135390:CDS | 30.0% |
| !!! | ATCAAGCATGTTTTGAAAGA+AGG | - | chr7_4:2556099-2556118 | Msa1135390:CDS | 30.0% |
| !!! | TCAAGCATGTTTTGAAAGAA+GGG | - | chr7_4:2556100-2556119 | Msa1135390:CDS | 30.0% |
| TTGCAATGAGAAATAGACAA+AGG | - | chr7_4:2556130-2556149 | Msa1135390:CDS | 30.0% | |
| CTATTATGCAAAAATCGGTA+AGG | - | chr7_4:2556317-2556336 | Msa1135390:CDS | 30.0% | |
| AAACGCGGTTATTTACTTTA+TGG | - | chr7_4:2556345-2556364 | Msa1135390:CDS | 30.0% | |
| TTATGATCTTGAATTAACCG+CGG | - | chr7_4:2556431-2556450 | Msa1135390:CDS | 30.0% | |
| ! | AATTTTCACGACGAATTTTG+TGG | - | chr7_4:2556734-2556753 | Msa1135390:intron | 30.0% |
| ! | TGATGAAATTGGTGATTTGT+TGG | - | chr7_4:2556884-2556903 | Msa1135390:CDS | 30.0% |
| TTTCATTGTGACAGTGAAAA+AGG | - | chr7_4:2557091-2557110 | Msa1135390:CDS | 30.0% | |
| AGACTATCACGAAATGAAGA+TGG | + | chr7_4:2555713-2555732 | None:intergenic | 35.0% | |
| ! | GGAAAGTGATTTGGATGTAA+GGG | + | chr7_4:2555772-2555791 | None:intergenic | 35.0% |
| ! | TGGAAAGTGATTTGGATGTA+AGG | + | chr7_4:2555773-2555792 | None:intergenic | 35.0% |
| ATCACTTTCCATGAATTCTC+AGG | - | chr7_4:2555782-2555801 | Msa1135390:CDS | 35.0% | |
| ! | AGATGAGTTTTCACTTAGGT+AGG | + | chr7_4:2555849-2555868 | None:intergenic | 35.0% |
| ! | GTTGAGATGAGTTTTCACTT+AGG | + | chr7_4:2555853-2555872 | None:intergenic | 35.0% |
| TCATCAATGCTAAGAACCAA+TGG | + | chr7_4:2555920-2555939 | None:intergenic | 35.0% | |
| GAAGTCACAGATGAATTTCA+AGG | - | chr7_4:2555947-2555966 | Msa1135390:CDS | 35.0% | |
| CAAATAATCCAAGTAGTGGT+TGG | - | chr7_4:2556163-2556182 | Msa1135390:CDS | 35.0% | |
| TATTTACTTTATGGTCCTCC+AGG | - | chr7_4:2556354-2556373 | Msa1135390:CDS | 35.0% | |
| ATAGTAGATTTACCTGTTCC+TGG | + | chr7_4:2556375-2556394 | None:intergenic | 35.0% | |
| AACTTGATCCTGCTCTTATT+AGG | - | chr7_4:2556760-2556779 | Msa1135390:CDS | 35.0% | |
| ACATCTTCATTCACAGACTT+AGG | + | chr7_4:2556954-2556973 | None:intergenic | 35.0% | |
| ATTTGATTCAAGCACTTGAG+AGG | - | chr7_4:2556991-2557010 | Msa1135390:CDS | 35.0% | |
| ACAAGAAGTAGAAGAAGACA+AGG | - | chr7_4:2557028-2557047 | Msa1135390:CDS | 35.0% | |
| AGACTATCACGAAATGAAGA+TGG | + | chr7_4:2555713-2555732 | None:intergenic | 35.0% | |
| ! | GGAAAGTGATTTGGATGTAA+GGG | + | chr7_4:2555772-2555791 | None:intergenic | 35.0% |
| ! | TGGAAAGTGATTTGGATGTA+AGG | + | chr7_4:2555773-2555792 | None:intergenic | 35.0% |
| ATCACTTTCCATGAATTCTC+AGG | - | chr7_4:2555782-2555801 | Msa1135390:CDS | 35.0% | |
| ! | AGATGAGTTTTCACTTAGGT+AGG | + | chr7_4:2555849-2555868 | None:intergenic | 35.0% |
| ! | GTTGAGATGAGTTTTCACTT+AGG | + | chr7_4:2555853-2555872 | None:intergenic | 35.0% |
| TCATCAATGCTAAGAACCAA+TGG | + | chr7_4:2555920-2555939 | None:intergenic | 35.0% | |
| GAAGTCACAGATGAATTTCA+AGG | - | chr7_4:2555947-2555966 | Msa1135390:CDS | 35.0% | |
| CAAATAATCCAAGTAGTGGT+TGG | - | chr7_4:2556163-2556182 | Msa1135390:CDS | 35.0% | |
| TATTTACTTTATGGTCCTCC+AGG | - | chr7_4:2556354-2556373 | Msa1135390:CDS | 35.0% | |
| ATAGTAGATTTACCTGTTCC+TGG | + | chr7_4:2556375-2556394 | None:intergenic | 35.0% | |
| AACTTGATCCTGCTCTTATT+AGG | - | chr7_4:2556760-2556779 | Msa1135390:CDS | 35.0% | |
| ACATCTTCATTCACAGACTT+AGG | + | chr7_4:2556954-2556973 | None:intergenic | 35.0% | |
| ATTTGATTCAAGCACTTGAG+AGG | - | chr7_4:2556991-2557010 | Msa1135390:CDS | 35.0% | |
| ACAAGAAGTAGAAGAAGACA+AGG | - | chr7_4:2557028-2557047 | Msa1135390:CDS | 35.0% | |
| GAACATTATGGTGGCTAGTA+TGG | + | chr7_4:2555663-2555682 | None:intergenic | 40.0% | |
| GGCATACATGAACATTATGG+TGG | + | chr7_4:2555672-2555691 | None:intergenic | 40.0% | |
| GTCTTTCACCTGAGAATTCA+TGG | + | chr7_4:2555793-2555812 | None:intergenic | 40.0% | |
| !!! | GACTTCAGCTTTGAGTCTTT+TGG | + | chr7_4:2555879-2555898 | None:intergenic | 40.0% |
| ! | TTCAAGGTGTTAAGCTTTGG+TGG | - | chr7_4:2555963-2555982 | Msa1135390:CDS | 40.0% |
| ! | TCAAGGTGTTAAGCTTTGGT+GGG | - | chr7_4:2555964-2555983 | Msa1135390:CDS | 40.0% |
| ! | AATCCAAGTAGTGGTTGGTA+TGG | - | chr7_4:2556168-2556187 | Msa1135390:CDS | 40.0% |
| TAACCATACCAACCACTACT+TGG | + | chr7_4:2556174-2556193 | None:intergenic | 40.0% | |
| !!! | GACTTTTGAGACACTTGCAT+TGG | - | chr7_4:2556236-2556255 | Msa1135390:CDS | 40.0% |
| ATGCAAAAATCGGTAAGGCT+TGG | - | chr7_4:2556322-2556341 | Msa1135390:CDS | 40.0% | |
| ATCTACTATGATAGCCGCTA+TGG | - | chr7_4:2556386-2556405 | Msa1135390:CDS | 40.0% | |
| GTTCATGAAATTCGCCATAG+CGG | + | chr7_4:2556403-2556422 | None:intergenic | 40.0% | |
| TCTTGAATTAACCGCGGTTA+AGG | - | chr7_4:2556437-2556456 | Msa1135390:CDS | 40.0% | |
| ! | CACTTGATTTTACTAGCCAG+AGG | - | chr7_4:2556535-2556554 | Msa1135390:CDS | 40.0% |
| TGAGGAAGAAGACTCATTCA+TGG | - | chr7_4:2556581-2556600 | Msa1135390:CDS | 40.0% | |
| TCTTATTAGGACAGGAAGGA+TGG | - | chr7_4:2556773-2556792 | Msa1135390:CDS | 40.0% | |
| AAATTCTCAGCAACATCAGC+AGG | + | chr7_4:2556927-2556946 | None:intergenic | 40.0% | |
| GAAGACAAGGAAGATAGTGT+AGG | - | chr7_4:2557041-2557060 | Msa1135390:CDS | 40.0% | |
| GTGGAAGATGTGAAGGAAAA+TGG | - | chr7_4:2557068-2557087 | Msa1135390:CDS | 40.0% | |
| GAACATTATGGTGGCTAGTA+TGG | + | chr7_4:2555663-2555682 | None:intergenic | 40.0% | |
| GGCATACATGAACATTATGG+TGG | + | chr7_4:2555672-2555691 | None:intergenic | 40.0% | |
| GTCTTTCACCTGAGAATTCA+TGG | + | chr7_4:2555793-2555812 | None:intergenic | 40.0% | |
| !!! | GACTTCAGCTTTGAGTCTTT+TGG | + | chr7_4:2555879-2555898 | None:intergenic | 40.0% |
| ! | TTCAAGGTGTTAAGCTTTGG+TGG | - | chr7_4:2555963-2555982 | Msa1135390:CDS | 40.0% |
| ! | TCAAGGTGTTAAGCTTTGGT+GGG | - | chr7_4:2555964-2555983 | Msa1135390:CDS | 40.0% |
| ! | AATCCAAGTAGTGGTTGGTA+TGG | - | chr7_4:2556168-2556187 | Msa1135390:CDS | 40.0% |
| TAACCATACCAACCACTACT+TGG | + | chr7_4:2556174-2556193 | None:intergenic | 40.0% | |
| !!! | GACTTTTGAGACACTTGCAT+TGG | - | chr7_4:2556236-2556255 | Msa1135390:CDS | 40.0% |
| ATGCAAAAATCGGTAAGGCT+TGG | - | chr7_4:2556322-2556341 | Msa1135390:CDS | 40.0% | |
| ATCTACTATGATAGCCGCTA+TGG | - | chr7_4:2556386-2556405 | Msa1135390:CDS | 40.0% | |
| GTTCATGAAATTCGCCATAG+CGG | + | chr7_4:2556403-2556422 | None:intergenic | 40.0% | |
| TCTTGAATTAACCGCGGTTA+AGG | - | chr7_4:2556437-2556456 | Msa1135390:CDS | 40.0% | |
| ! | CACTTGATTTTACTAGCCAG+AGG | - | chr7_4:2556535-2556554 | Msa1135390:CDS | 40.0% |
| TGAGGAAGAAGACTCATTCA+TGG | - | chr7_4:2556581-2556600 | Msa1135390:CDS | 40.0% | |
| TCTTATTAGGACAGGAAGGA+TGG | - | chr7_4:2556773-2556792 | Msa1135390:CDS | 40.0% | |
| AAATTCTCAGCAACATCAGC+AGG | + | chr7_4:2556927-2556946 | None:intergenic | 40.0% | |
| GAAGACAAGGAAGATAGTGT+AGG | - | chr7_4:2557041-2557060 | Msa1135390:CDS | 40.0% | |
| GTGGAAGATGTGAAGGAAAA+TGG | - | chr7_4:2557068-2557087 | Msa1135390:CDS | 40.0% | |
| AGTGAACTATGGGCACAACT+AGG | - | chr7_4:2555635-2555654 | Msa1135390:CDS | 45.0% | |
| GTAGATTTACCTGTTCCTGG+AGG | + | chr7_4:2556372-2556391 | None:intergenic | 45.0% | |
| CTCGGTATTATCCTTAACCG+CGG | + | chr7_4:2556451-2556470 | None:intergenic | 45.0% | |
| GATCCTGCTCTTATTAGGAC+AGG | - | chr7_4:2556765-2556784 | Msa1135390:CDS | 45.0% | |
| CTTCCTGTCCTAATAAGAGC+AGG | + | chr7_4:2556771-2556790 | None:intergenic | 45.0% | |
| CTGCTCTTATTAGGACAGGA+AGG | - | chr7_4:2556769-2556788 | Msa1135390:CDS | 45.0% | |
| TCAAGCACTTGAGAGGAAGA+AGG | - | chr7_4:2556998-2557017 | Msa1135390:CDS | 45.0% | |
| GGAAGATAGTGTAGGAACTG+TGG | - | chr7_4:2557049-2557068 | Msa1135390:CDS | 45.0% | |
| AGGAACTGTGGAAGATGTGA+AGG | - | chr7_4:2557061-2557080 | Msa1135390:CDS | 45.0% | |
| AGTGAACTATGGGCACAACT+AGG | - | chr7_4:2555635-2555654 | Msa1135390:CDS | 45.0% | |
| GTAGATTTACCTGTTCCTGG+AGG | + | chr7_4:2556372-2556391 | None:intergenic | 45.0% | |
| CTCGGTATTATCCTTAACCG+CGG | + | chr7_4:2556451-2556470 | None:intergenic | 45.0% | |
| GATCCTGCTCTTATTAGGAC+AGG | - | chr7_4:2556765-2556784 | Msa1135390:CDS | 45.0% | |
| CTTCCTGTCCTAATAAGAGC+AGG | + | chr7_4:2556771-2556790 | None:intergenic | 45.0% | |
| CTGCTCTTATTAGGACAGGA+AGG | - | chr7_4:2556769-2556788 | Msa1135390:CDS | 45.0% | |
| TCAAGCACTTGAGAGGAAGA+AGG | - | chr7_4:2556998-2557017 | Msa1135390:CDS | 45.0% | |
| GGAAGATAGTGTAGGAACTG+TGG | - | chr7_4:2557049-2557068 | Msa1135390:CDS | 45.0% | |
| AGGAACTGTGGAAGATGTGA+AGG | - | chr7_4:2557061-2557080 | Msa1135390:CDS | 45.0% | |
| GCAAGTGTCTCAAAAGTCGC+AGG | + | chr7_4:2556234-2556253 | None:intergenic | 50.0% | |
| ATCGGTAAGGCTTGGAAACG+CGG | - | chr7_4:2556330-2556349 | Msa1135390:CDS | 50.0% | |
| CTTTATGGTCCTCCAGGAAC+AGG | - | chr7_4:2556360-2556379 | Msa1135390:CDS | 50.0% | |
| AGCACTTGAGAGGAAGAAGG+TGG | - | chr7_4:2557001-2557020 | Msa1135390:CDS | 50.0% | |
| GCAAGTGTCTCAAAAGTCGC+AGG | + | chr7_4:2556234-2556253 | None:intergenic | 50.0% | |
| ATCGGTAAGGCTTGGAAACG+CGG | - | chr7_4:2556330-2556349 | Msa1135390:CDS | 50.0% | |
| CTTTATGGTCCTCCAGGAAC+AGG | - | chr7_4:2556360-2556379 | Msa1135390:CDS | 50.0% | |
| AGCACTTGAGAGGAAGAAGG+TGG | - | chr7_4:2557001-2557020 | Msa1135390:CDS | 50.0% | |
| GATGGAATTTGGTCCGCGTG+TGG | - | chr7_4:2556696-2556715 | Msa1135390:intron | 55.0% | |
| AATCCTCTCTCCTCCACACG+CGG | + | chr7_4:2556712-2556731 | None:intergenic | 55.0% | |
| GATGGAATTTGGTCCGCGTG+TGG | - | chr7_4:2556696-2556715 | Msa1135390:intron | 55.0% | |
| AATCCTCTCTCCTCCACACG+CGG | + | chr7_4:2556712-2556731 | None:intergenic | 55.0% | |
| GGAATTTGGTCCGCGTGTGG+AGG | - | chr7_4:2556699-2556718 | Msa1135390:intron | 60.0% | |
| GGAATTTGGTCCGCGTGTGG+AGG | - | chr7_4:2556699-2556718 | Msa1135390:intron | 60.0% | |
| GGTCCGCGTGTGGAGGAGAG+AGG | - | chr7_4:2556706-2556725 | Msa1135390:intron | 70.0% | |
| GGTCCGCGTGTGGAGGAGAG+AGG | - | chr7_4:2556706-2556725 | Msa1135390:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 2555632 | 2557127 | 2555632 | ID=Msa1135390;Name=Msa1135390 |
| chr7_4 | mRNA | 2555632 | 2557127 | 2555632 | ID=Msa1135390-mRNA-1;Parent=Msa1135390;Name=Msa1135390-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|2|0|464 |
| chr7_4 | exon | 2556743 | 2557127 | 2556743 | ID=Msa1135390-mRNA-1:exon:828;Parent=Msa1135390-mRNA-1 |
| chr7_4 | exon | 2555632 | 2556641 | 2555632 | ID=Msa1135390-mRNA-1:exon:827;Parent=Msa1135390-mRNA-1 |
| chr7_4 | CDS | 2556743 | 2557127 | 2556743 | ID=Msa1135390-mRNA-1:cds;Parent=Msa1135390-mRNA-1 |
| chr7_4 | CDS | 2555632 | 2556641 | 2555632 | ID=Msa1135390-mRNA-1:cds;Parent=Msa1135390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
