AlfalfaGEDB | Msa0792760

M. sativa cultivar zhongmu-4 / Msa0792760

KEGG: K02872
GO: GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0005844 GO:0005911 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009987 GO:0010467 GO:0015934 GO:0016020 GO:0019538 GO:0022625 GO:0022626 GO:0030054 GO:0032991 GO:0034641 GO:0034645 GO:0042788 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0055044 GO:0071704 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904
PFAM: PF00572.21

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0792760	XP_013448778.1	99.515	206	1	0	1	206	1	206	4.90e-148	419

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0792760	sp\|Q9FKC0\|R13A4_ARATH	85.922	206	29	0	1	206	1	206	1.38e-132	373

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0792760	B7FGF9	99.515	206	1	0	1	206	1	206	2.34e-148	419

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0002750	Msa0792760	0.831730	1.414218e-55	-8.615850e-47
Msa0002790	Msa0792760	0.815031	1.138411e-51	-8.615850e-47
Msa0003720	Msa0792760	0.807873	4.086787e-50	-8.615850e-47
Msa0003780	Msa0792760	0.861091	1.308968e-63	-8.615850e-47
Msa0006380	Msa0792760	0.818037	2.415658e-52	-8.615850e-47
Msa0027260	Msa0792760	0.878236	3.307145e-69	-8.615850e-47
Msa0032090	Msa0792760	0.809184	2.145165e-50	-8.615850e-47
Msa0032920	Msa0792760	-0.801977	6.979346e-49	-8.615850e-47
Msa0040690	Msa0792760	0.854445	1.225508e-61	-8.615850e-47
Msa0042280	Msa0792760	0.866456	2.813930e-65	-8.615850e-47
Msa0047160	Msa0792760	0.809266	2.060280e-50	-8.615850e-47
Msa0048180	Msa0792760	0.834490	2.908904e-56	-8.615850e-47
Msa0049370	Msa0792760	0.995154	1.617520e-213	-8.615850e-47
Msa0056470	Msa0792760	0.840810	6.949490e-58	-8.615850e-47
Msa0059040	Msa0792760	0.826570	2.522809e-54	-8.615850e-47
Msa0059110	Msa0792760	0.823590	1.275964e-53	-8.615850e-47
Msa0072420	Msa0792760	0.827289	1.698160e-54	-8.615850e-47
Msa0075170	Msa0792760	0.811699	6.144700e-51	-8.615850e-47
Msa0086750	Msa0792760	0.830396	3.006156e-55	-8.615850e-47
Msa0090520	Msa0792760	0.808582	2.884808e-50	-8.615850e-47
Msa0091410	Msa0792760	0.800128	1.666592e-48	-8.615850e-47
Msa0094470	Msa0792760	0.829916	3.938067e-55	-8.615850e-47
Msa0100740	Msa0792760	0.826677	2.378726e-54	-8.615850e-47
Msa0105370	Msa0792760	0.820219	7.699383e-53	-8.615850e-47
Msa0118710	Msa0792760	0.818696	1.712953e-52	-8.615850e-47
Msa0608320	Msa0792760	0.826447	2.699657e-54	-8.615850e-47
Msa0615440	Msa0792760	0.837822	4.142361e-57	-8.615850e-47
Msa0615580	Msa0792760	0.817560	3.095180e-52	-8.615850e-47
Msa0615710	Msa0792760	0.827394	1.602966e-54	-8.615850e-47
Msa0621950	Msa0792760	0.819014	1.450907e-52	-8.615850e-47
Msa0661300	Msa0792760	0.842888	1.963681e-58	-8.615850e-47
Msa0669520	Msa0792760	0.859107	5.198408e-63	-8.615850e-47
Msa0698490	Msa0792760	0.836864	7.288738e-57	-8.615850e-47
Msa0698660	Msa0792760	0.835337	1.779208e-56	-8.615850e-47
Msa0698780	Msa0792760	0.851257	9.985142e-61	-8.615850e-47
Msa0722020	Msa0792760	0.814200	1.738840e-51	-8.615850e-47
Msa0738100	Msa0792760	0.825458	4.636244e-54	-8.615850e-47
Msa0788850	Msa0792760	0.802138	6.465942e-49	-8.615850e-47
Msa0792760	Msa0817540	0.824117	9.603701e-54	-8.615850e-47
Msa0792760	Msa0881290	0.835960	1.238044e-56	-8.615850e-47
Msa0792760	Msa0902760	0.860735	1.678729e-63	-8.615850e-47
Msa0792760	Msa0925440	0.800352	1.500416e-48	-8.615850e-47
Msa0792760	Msa0953310	0.838068	3.581852e-57	-8.615850e-47
Msa0792760	Msa0968590	0.808746	2.661247e-50	-8.615850e-47
Msa0792760	Msa1006840	0.865912	4.185021e-65	-8.615850e-47
Msa0792760	Msa1013400	0.857954	1.147543e-62	-8.615850e-47
Msa0792760	Msa1019240	0.837284	5.690385e-57	-8.615850e-47
Msa0792760	Msa1019260	0.850749	1.388182e-60	-8.615850e-47
Msa0792760	Msa1043690	0.809258	2.068338e-50	-8.615850e-47
Msa0792760	Msa1051880	0.862003	6.894228e-64	-8.615850e-47
Msa0792760	Msa1078170	0.804781	1.831945e-49	-8.615850e-47
Msa0792760	Msa1081150	0.828085	1.093529e-54	-8.615850e-47
Msa0792760	Msa1081930	0.860059	2.688615e-63	-8.615850e-47
Msa0792760	Msa1093530	0.859061	5.365203e-63	-8.615850e-47
Msa0792760	Msa1104140	0.878970	1.824328e-69	-8.615850e-47
Msa0792760	Msa1104210	0.845783	3.273573e-59	-8.615850e-47
Msa0792760	Msa1106700	0.803275	3.767194e-49	-8.615850e-47
Msa0792760	Msa1124110	0.800617	1.325124e-48	-8.615850e-47
Msa0792760	Msa1126510	0.854809	9.608946e-62	-8.615850e-47
Msa0792760	Msa1126830	0.828243	1.001948e-54	-8.615850e-47
Msa0792760	Msa1135890	0.803872	2.832713e-49	-8.615850e-47
Msa0792760	Msa1147900	0.817611	3.014010e-52	-8.615850e-47
Msa0792760	Msa1147970	0.807012	6.221100e-50	-8.615850e-47
Msa0792760	Msa1148910	0.802940	4.418906e-49	-8.615850e-47
Msa0792760	Msa1165780	0.806410	8.337886e-50	-8.615850e-47
Msa0792760	Msa1165940	0.848063	7.781303e-60	-8.615850e-47
Msa0792760	Msa1166860	0.852784	3.677485e-61	-8.615850e-47
Msa0792760	Msa1166870	0.814192	1.745969e-51	-8.615850e-47
Msa0792760	Msa1181830	0.803600	3.226098e-49	-8.615850e-47
Msa0792760	Msa1181840	0.804555	2.042211e-49	-8.615850e-47
Msa0792760	Msa1181850	0.842601	2.341267e-58	-8.615850e-47
Msa0792760	Msa1181860	0.830738	2.480147e-55	-8.615850e-47
Msa0792760	Msa1207270	0.878312	3.109099e-69	-8.615850e-47
Msa0792760	Msa1209200	0.804768	1.843379e-49	-8.615850e-47
Msa0792760	Msa1215820	0.823238	1.542441e-53	-8.615850e-47
Msa0792760	Msa1218600	0.850455	1.679919e-60	-8.615850e-47
Msa0792760	Msa1229320	0.800358	1.495993e-48	-8.615850e-47
Msa0792760	Msa1251160	0.810944	8.961587e-51	-8.615850e-47
Msa0792760	Msa1254730	0.846837	1.689831e-59	-8.615850e-47
Msa0792760	Msa1257510	0.814219	1.722646e-51	-8.615850e-47
Msa0792760	Msa1265630	0.813585	2.375531e-51	-8.615850e-47
Msa0792760	Msa1294820	0.826466	2.672135e-54	-8.615850e-47
Msa0792760	Msa1305050	0.813638	2.312837e-51	-8.615850e-47
Msa0792760	Msa1332590	0.801661	8.105351e-49	-8.615850e-47
Msa0792760	Msa1343260	0.821204	4.572631e-53	-8.615850e-47
Msa0792760	Msa1363330	0.848752	5.017224e-60	-8.615850e-47
Msa0792760	Msa1374120	0.836465	9.213154e-57	-8.615850e-47
Msa0792760	Msa1376650	0.811707	6.117802e-51	-8.615850e-47
Msa0792760	Msa1379760	0.856217	3.736022e-62	-8.615850e-47
Msa0792760	Msa1382560	0.816555	5.206718e-52	-8.615850e-47
Msa0792760	Msa1382620	0.804995	1.653112e-49	-8.615850e-47
Msa0792760	Msa1386600	0.849354	3.413003e-60	-8.615850e-47
Msa0792760	Msa1394290	0.837625	4.654581e-57	-8.615850e-47
Msa0792760	Msa1394500	0.812767	3.593004e-51	-8.615850e-47
Msa0792760	Msa1399530	0.814961	1.180181e-51	-8.615850e-47
Msa0792760	Msa1432700	0.835592	1.533673e-56	-8.615850e-47
Msa0792760	Msa1433310	0.823288	1.501428e-53	-8.615850e-47
Msa0792760	Msa1443300	0.805258	1.456184e-49	-8.615850e-47
Msa0792760	Msa1448690	0.825581	4.335707e-54	-8.615850e-47
Msa0792760	Msa1450280	0.841108	5.804185e-58	-8.615850e-47
Msa0792760	Msa1451160	0.806834	6.785367e-50	-8.615850e-47
Msa0792760	Msa1456050	0.836845	7.370102e-57	-8.615850e-47
Msa0792760	Msa1457920	0.822253	2.615361e-53	-8.615850e-47
Msa0128860	Msa0792760	0.861265	1.158580e-63	-8.615850e-47
Msa0137990	Msa0792760	0.813031	3.144488e-51	-8.615850e-47
Msa0140820	Msa0792760	0.846242	2.456736e-59	-8.615850e-47
Msa0146340	Msa0792760	0.828601	8.213295e-55	-8.615850e-47
Msa0167480	Msa0792760	0.822759	1.994558e-53	-8.615850e-47
Msa0172070	Msa0792760	0.801840	7.448444e-49	-8.615850e-47
Msa0174730	Msa0792760	0.861533	9.598119e-64	-8.615850e-47
Msa0183900	Msa0792760	0.815730	7.959565e-52	-8.615850e-47
Msa0187930	Msa0792760	0.823383	1.426761e-53	-8.615850e-47
Msa0188350	Msa0792760	0.817184	3.760654e-52	-8.615850e-47
Msa0189700	Msa0792760	0.835754	1.395643e-56	-8.615850e-47
Msa0194540	Msa0792760	0.816268	6.035308e-52	-8.615850e-47
Msa0199880	Msa0792760	0.815421	9.324233e-52	-8.615850e-47
Msa0231100	Msa0792760	0.823437	1.386045e-53	-8.615850e-47
Msa0231980	Msa0792760	0.835898	1.283389e-56	-8.615850e-47
Msa0232010	Msa0792760	0.841120	5.762774e-58	-8.615850e-47
Msa0232050	Msa0792760	0.831222	1.886805e-55	-8.615850e-47
Msa0232080	Msa0792760	0.845465	3.994239e-59	-8.615850e-47
Msa0366890	Msa0792760	0.833788	4.360337e-56	-8.615850e-47
Msa0369450	Msa0792760	0.879986	7.958639e-70	-8.615850e-47
Msa0374930	Msa0792760	0.823823	1.125316e-53	-8.615850e-47
Msa0376310	Msa0792760	0.801983	6.959411e-49	-8.615850e-47
Msa0385580	Msa0792760	0.806467	8.109000e-50	-8.615850e-47
Msa0393370	Msa0792760	0.800564	1.358638e-48	-8.615850e-47
Msa0395820	Msa0792760	0.864759	9.646802e-65	-8.615850e-47
Msa0414800	Msa0792760	0.812988	3.212822e-51	-8.615850e-47
Msa0418270	Msa0792760	0.832459	9.340611e-56	-8.615850e-47
Msa0427150	Msa0792760	0.826146	3.183980e-54	-8.615850e-47
Msa0443390	Msa0792760	0.823223	1.555241e-53	-8.615850e-47
Msa0471440	Msa0792760	0.803932	2.752536e-49	-8.615850e-47
Msa0244780	Msa0792760	0.823986	1.030468e-53	-8.615850e-47
Msa0249580	Msa0792760	0.807194	5.692736e-50	-8.615850e-47
Msa0250820	Msa0792760	0.811274	7.597444e-51	-8.615850e-47
Msa0258850	Msa0792760	0.805710	1.170572e-49	-8.615850e-47
Msa0268130	Msa0792760	0.824635	7.253804e-54	-8.615850e-47
Msa0272490	Msa0792760	0.800600	1.335653e-48	-8.615850e-47
Msa0280610	Msa0792760	0.827902	1.210578e-54	-8.615850e-47
Msa0289580	Msa0792760	0.830021	3.712388e-55	-8.615850e-47
Msa0289610	Msa0792760	0.830820	2.368175e-55	-8.615850e-47
Msa0298990	Msa0792760	0.826213	3.068430e-54	-8.615850e-47
Msa0304590	Msa0792760	0.805102	1.570034e-49	-8.615850e-47
Msa0307850	Msa0792760	0.811629	6.361774e-51	-8.615850e-47
Msa0312700	Msa0792760	0.801104	1.053933e-48	-8.615850e-47
Msa0326480	Msa0792760	0.818011	2.448624e-52	-8.615850e-47
Msa0327300	Msa0792760	0.818653	1.751714e-52	-8.615850e-47
Msa0327330	Msa0792760	0.847151	1.386318e-59	-8.615850e-47
Msa0336010	Msa0792760	0.844380	7.835210e-59	-8.615850e-47
Msa0340380	Msa0792760	0.816013	6.881886e-52	-8.615850e-47
Msa0357900	Msa0792760	0.842533	2.440629e-58	-8.615850e-47
Msa0521050	Msa0792760	0.865105	7.516349e-65	-8.615850e-47
Msa0524500	Msa0792760	0.813270	2.786056e-51	-8.615850e-47
Msa0526540	Msa0792760	0.844781	6.112762e-59	-8.615850e-47
Msa0527020	Msa0792760	0.807721	4.401100e-50	-8.615850e-47
Msa0531650	Msa0792760	0.842670	2.244176e-58	-8.615850e-47
Msa0555450	Msa0792760	0.800494	1.403532e-48	-8.615850e-47
Msa0556060	Msa0792760	0.814161	1.773931e-51	-8.615850e-47
Msa0572840	Msa0792760	0.800120	1.672697e-48	-8.615850e-47
Msa0576940	Msa0792760	0.840150	1.034177e-57	-8.615850e-47
Msa0581110	Msa0792760	0.830574	2.720022e-55	-8.615850e-47
Msa0588360	Msa0792760	0.869491	2.975073e-66	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
Msa0792760	MtrunA17_Chr7g0237121	99.515	206	1	1	206	1	206	4.50e-152	419
Msa0792760	MtrunA17_Chr1g0155981	94.660	206	11	1	206	1	206	9.61e-144	399
Msa0792760	MtrunA17_Chr5g0437981	90.291	206	20	1	206	1	206	6.52e-138	384

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0792760	AT5G48760.1	85.922	206	29	0	1	206	1	206	1.40e-133	373
Msa0792760	AT5G48760.2	85.922	206	29	0	1	206	1	206	1.40e-133	373
Msa0792760	AT4G13170.1	83.981	206	33	0	1	206	1	206	2.96e-131	367
Msa0792760	AT3G07110.1	83.981	206	33	0	1	206	1	206	3.23e-131	367
Msa0792760	AT3G24830.1	82.524	206	36	0	1	206	1	206	7.85e-130	363
Msa0792760	AT3G07110.2	83.575	207	33	1	1	206	1	207	2.41e-129	362

Find 82 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATCGAATTCCATTTCAGTTT+TGG	0.252019	5_3:+4513622	Msa0792760:three_prime_UTR
TTGATAGTGTGTTGGCTCTT+TGG	0.265631	5_3:+4513737	Msa0792760:three_prime_UTR
GGGCTCCCAGTAAGATCTTT+TGG	0.302766	5_3:+4512245	Msa0792760:CDS
AAATTTCAATTTGAACAGTT+TGG	0.303868	5_3:+4514032	Msa0792760:three_prime_UTR
TTGGTGTAACGTCGTATATT+TGG	0.304119	5_3:+4513756	Msa0792760:three_prime_UTR
GCAATCGAAGCAATATTATA+AGG	0.315515	5_3:+4513940	Msa0792760:three_prime_UTR
GTGCTTCTGGTGGTCTTGTT+AGG	0.322378	5_3:+4512149	Msa0792760:CDS
TTCTTCTTTGTGGCTCGGTT+AGG	0.330627	5_3:-4511969	None:intergenic
TGAAGTATATGAGATTTCTT+AGG	0.358557	5_3:+4512179	Msa0792760:CDS
TAACATAAAGATTCATAGTA+TGG	0.365042	5_3:-4513796	None:intergenic
ACCAAAATAACGCACCTTGA+TGG	0.377840	5_3:-4513332	None:intergenic
GGTCGTTATTTAATGTTTGT+TGG	0.383334	5_3:+4513643	Msa0792760:three_prime_UTR
TGTGAAGAGATTTGTGCTTC+TGG	0.391599	5_3:+4512136	Msa0792760:CDS
CGTATATTTGGATTTGTTTG+TGG	0.392676	5_3:+4513768	Msa0792760:three_prime_UTR
AATAACGACCAAAACTGAAA+TGG	0.397312	5_3:-4513630	None:intergenic
GATGCAAGGCACCACATGTT+AGG	0.408002	5_3:+4512052	Msa0792760:CDS
CTGGGAGCCCTAAAATGAAT+AGG	0.417019	5_3:-4512232	None:intergenic
TAGGGTGTTGAGGCTTCAAA+AGG	0.427735	5_3:+4513249	Msa0792760:intron
AAATACTACTCAGTACTTAA+CGG	0.437826	5_3:-4513562	None:intergenic
GTGGAGAGGCTGCACTTGCC+AGG	0.446939	5_3:+4513069	Msa0792760:CDS
CTCCATATGACAAAATTAAG+AGG	0.448931	5_3:+4513117	Msa0792760:CDS
TCTTCTTCTTCTTTGTGGCT+CGG	0.449517	5_3:-4511974	None:intergenic
CAAGATTCTCAGAATTCTGA+TGG	0.450455	5_3:+4514066	Msa0792760:three_prime_UTR
TACTCTAGAAATGACAATCT+TGG	0.450998	5_3:+4513666	Msa0792760:three_prime_UTR
AATACTACTCAGTACTTAAC+GGG	0.453354	5_3:-4513561	None:intergenic
CTTTATGTTAGTTGTTCGAT+TGG	0.455131	5_3:+4513809	Msa0792760:three_prime_UTR
CGGGAGCAAGAATTTCAAGT+TGG	0.456903	5_3:-4513542	None:intergenic
GGGAGCAAGAATTTCAAGTT+GGG	0.464166	5_3:-4513541	None:intergenic
AGTACGCCAAAAGATCTTAC+TGG	0.471106	5_3:-4512251	None:intergenic
ATATGAGATTTCTTAGGAAG+AGG	0.471394	5_3:+4512185	Msa0792760:CDS
TGTGTATTTAAGATGCATAT+AGG	0.477220	5_3:+4513856	Msa0792760:three_prime_UTR
AGAAGCAGATCAATAAATTG+AGG	0.485847	5_3:+4513481	Msa0792760:CDS
AATACTTACTTAAGAGCATC+GGG	0.494332	5_3:-4513149	None:intergenic
AATTGTCAGCAGAGGTTGGA+TGG	0.505889	5_3:+4513296	Msa0792760:CDS
GGTCACAAATACTGCACCCT+TGG	0.507486	5_3:+4513271	Msa0792760:CDS
ATAATTTGACTATAAGCTGT+AGG	0.508933	5_3:+4513983	Msa0792760:three_prime_UTR
TCTCCACGCTTTGTCTTGTG+TGG	0.520427	5_3:-4513053	None:intergenic
GTTGCAAAGGAGCTTCTCAA+TGG	0.520484	5_3:+4512091	Msa0792760:CDS
TGGAGACAAAGAGGAAGGAA+AGG	0.523797	5_3:+4513436	Msa0792760:CDS
GAAGCAGATCAATAAATTGA+GGG	0.524740	5_3:+4513482	Msa0792760:CDS
GGCTGCACTTGCCAGGATGA+AGG	0.525665	5_3:+4513076	Msa0792760:CDS
TTGTGTCCGTCTTAATACTC+TGG	0.540044	5_3:+4513890	Msa0792760:three_prime_UTR
GGACAATTGTCAGCAGAGGT+TGG	0.549916	5_3:+4513292	Msa0792760:CDS
TAATTTGACTATAAGCTGTA+GGG	0.551883	5_3:+4513984	Msa0792760:three_prime_UTR
ACCTTCATACACCTTCATCC+TGG	0.554960	5_3:-4513087	None:intergenic
CAATACTTACTTAAGAGCAT+CGG	0.555382	5_3:-4513150	None:intergenic
GCCAGGATGAAGGTGTATGA+AGG	0.560258	5_3:+4513086	Msa0792760:CDS
GAACTACGCCGGCACCATCA+AGG	0.577844	5_3:+4513318	Msa0792760:CDS
CCTCTGCTGACAATTGTCCA+AGG	0.579787	5_3:-4513288	None:intergenic
AACAGGAGCTGGAGACAAAG+AGG	0.580730	5_3:+4513427	Msa0792760:intron
ACTTGCCTCCATCGTTGCAA+AGG	0.580774	5_3:+4512078	Msa0792760:CDS
TATCAGCTTATGACGAAACT+CGG	0.581151	5_3:-4513963	None:intergenic
GAGAAGCTCCTTTGCAACGA+TGG	0.584142	5_3:-4512086	None:intergenic
ATATGACAAAATTAAGAGGA+TGG	0.585968	5_3:+4513121	Msa0792760:CDS
GAAGAGATTTGTGCTTCTGG+TGG	0.586152	5_3:+4512139	Msa0792760:CDS
CTCTGCTGACAATTGTCCAA+GGG	0.586494	5_3:-4513287	None:intergenic
ATAACGCACCTTGATGGTGC+CGG	0.587747	5_3:-4513326	None:intergenic
GGAGACAAAGAGGAAGGAAA+GGG	0.597942	5_3:+4513437	Msa0792760:CDS
TGGATGAAATTAGGGTGTTG+AGG	0.598085	5_3:+4513239	Msa0792760:intron
GTACGCCAAAAGATCTTACT+GGG	0.598293	5_3:-4512250	None:intergenic
GGAGCTTCTCAATGGACAGA+AGG	0.600116	5_3:+4512099	Msa0792760:CDS
ATGAACACAAAGCCTTCTCA+TGG	0.602489	5_3:+4512208	Msa0792760:CDS
AGGTATCTGCGCAAAGAGGG+TGG	0.610561	5_3:+4512024	Msa0792760:CDS
TTCAGGTATCTGCGCAAAGA+GGG	0.610853	5_3:+4512021	Msa0792760:CDS
ATATCAGCTAAACGATGCAT+AGG	0.610957	5_3:+4514089	Msa0792760:three_prime_UTR
CACAATATTCAGTCTCCTAG+AGG	0.611494	5_3:-4513837	None:intergenic
AGAGGGTGGTGATCGATGCA+AGG	0.618099	5_3:+4512038	Msa0792760:CDS
GGAGCTGGAGACAAAGAGGA+AGG	0.618380	5_3:+4513431	Msa0792760:intron
AGGGTGTTGAGGCTTCAAAA+GGG	0.622262	5_3:+4513250	Msa0792760:intron
CCTTGGACAATTGTCAGCAG+AGG	0.626435	5_3:+4513288	Msa0792760:CDS
TGTAGGGATTTAGACTACCA+TGG	0.630509	5_3:+4514000	Msa0792760:three_prime_UTR
GTTCAGGTATCTGCGCAAAG+AGG	0.631106	5_3:+4512020	Msa0792760:CDS
ATTCCACACAAGACAAAGCG+TGG	0.632644	5_3:+4513050	Msa0792760:CDS
AAGCTCCTTTGCAACGATGG+AGG	0.638563	5_3:-4512083	None:intergenic
GGAGCAAGAATTTCAAGTTG+GGG	0.644018	5_3:-4513540	None:intergenic
GAGGTTGGATGGAACTACGC+CGG	0.652387	5_3:+4513307	Msa0792760:CDS
TGAAATTTGAAAGACAACCA+TGG	0.653290	5_3:-4514017	None:intergenic
AAATGAATAGGACCATGAGA+AGG	0.655070	5_3:-4512220	None:intergenic
TCAGTACCAGAGTATTAAGA+CGG	0.655946	5_3:-4513896	None:intergenic
ACACAAGACAAAGCGTGGAG+AGG	0.661685	5_3:+4513055	Msa0792760:CDS
AGAGTATTAAGACGGACACA+AGG	0.686499	5_3:-4513888	None:intergenic
AGGCAAGTCTACCTAACATG+TGG	0.695141	5_3:-4512063	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTAATTCATAAATCACATTT+TGG	+	chr5_3:4512397-4512416	Msa0792760:intron	15.0%
!!!	TATTGATTAATGTTTGTAAT+TGG	+	chr5_3:4512506-4512525	Msa0792760:intron	15.0%
!!!	TTAATTCATAAATCACATTT+TGG	+	chr5_3:4512397-4512416	Msa0792760:intron	15.0%
!!!	TATTGATTAATGTTTGTAAT+TGG	+	chr5_3:4512506-4512525	Msa0792760:intron	15.0%
!!!	TTTTTGTTAAATCGCATTTT+TGG	+	chr5_3:4512313-4512332	Msa0792760:intron	20.0%
!!!	GTTAAGTGATTTTTTTAATG+TGG	+	chr5_3:4512528-4512547	Msa0792760:intron	20.0%
!!	TTGTTTAGTGTTATAGTATT+TGG	+	chr5_3:4512634-4512653	Msa0792760:intron	20.0%
!!!	TTAATTTTTCTCTTGTTAAC+AGG	+	chr5_3:4513410-4513429	Msa0792760:intron	20.0%
!!	TAACATAAAGATTCATAGTA+TGG	-	chr5_3:4513799-4513818	None:intergenic	20.0%
!!	AAATTTCAATTTGAACAGTT+TGG	+	chr5_3:4514032-4514051	Msa0792760:three_prime_UTR	20.0%
!!!	TTTTTGTTAAATCGCATTTT+TGG	+	chr5_3:4512313-4512332	Msa0792760:intron	20.0%
!!!	GTTAAGTGATTTTTTTAATG+TGG	+	chr5_3:4512528-4512547	Msa0792760:intron	20.0%
!!	TTGTTTAGTGTTATAGTATT+TGG	+	chr5_3:4512634-4512653	Msa0792760:intron	20.0%
!!!	TTAATTTTTCTCTTGTTAAC+AGG	+	chr5_3:4513410-4513429	Msa0792760:intron	20.0%
!!	TAACATAAAGATTCATAGTA+TGG	-	chr5_3:4513799-4513818	None:intergenic	20.0%
!!	AAATTTCAATTTGAACAGTT+TGG	+	chr5_3:4514032-4514051	Msa0792760:three_prime_UTR	20.0%
!	TGAAGTATATGAGATTTCTT+AGG	+	chr5_3:4512179-4512198	Msa0792760:CDS	25.0%
!!!	TATTACTAGGTTGTTGTTTT+TGG	+	chr5_3:4512337-4512356	Msa0792760:intron	25.0%
!!!	ACTGCATTTTTGATAATACT+AGG	+	chr5_3:4512366-4512385	Msa0792760:intron	25.0%
!!	ATCACATTTTGGATATTACT+AGG	+	chr5_3:4512408-4512427	Msa0792760:intron	25.0%
!	TTAAAGATGAGTTGTTTAAG+AGG	+	chr5_3:4512557-4512576	Msa0792760:intron	25.0%
!	TTGATTATTGTGTTCTTTGT+TGG	+	chr5_3:4512712-4512731	Msa0792760:intron	25.0%
!!!	TTGTGAATTGTGATGTTTTT+TGG	+	chr5_3:4512779-4512798	Msa0792760:intron	25.0%
!!!	TTGAAAGTTGTGTTCTTTTT+TGG	+	chr5_3:4512831-4512850	Msa0792760:intron	25.0%
!!	TGATATGTAATTGTTTTCGT+GGG	+	chr5_3:4512994-4513013	Msa0792760:intron	25.0%
!!	ATCCTCTTAATTTTGTCATA+TGG	-	chr5_3:4513122-4513141	None:intergenic	25.0%
!	ATATGACAAAATTAAGAGGA+TGG	+	chr5_3:4513121-4513140	Msa0792760:CDS	25.0%
!	GAATTTGAATACTGAATGAT+TGG	+	chr5_3:4513219-4513238	Msa0792760:intron	25.0%
!	TGAATGATTGGATGAAATTA+GGG	+	chr5_3:4513231-4513250	Msa0792760:intron	25.0%
!	TTGTACTTGATAAATAACAG+CGG	+	chr5_3:4513376-4513395	Msa0792760:intron	25.0%
!	AAATACTACTCAGTACTTAA+CGG	-	chr5_3:4513565-4513584	None:intergenic	25.0%
!!!	ATTACTTTTTGATAGTGTGT+TGG	+	chr5_3:4513729-4513748	Msa0792760:three_prime_UTR	25.0%
!!	TGTGTATTTAAGATGCATAT+AGG	+	chr5_3:4513856-4513875	Msa0792760:three_prime_UTR	25.0%
!	ATAATTTGACTATAAGCTGT+AGG	+	chr5_3:4513983-4514002	Msa0792760:three_prime_UTR	25.0%
!	TAATTTGACTATAAGCTGTA+GGG	+	chr5_3:4513984-4514003	Msa0792760:three_prime_UTR	25.0%
!	TGAAGTATATGAGATTTCTT+AGG	+	chr5_3:4512179-4512198	Msa0792760:CDS	25.0%
!!!	TATTACTAGGTTGTTGTTTT+TGG	+	chr5_3:4512337-4512356	Msa0792760:intron	25.0%
!!!	ACTGCATTTTTGATAATACT+AGG	+	chr5_3:4512366-4512385	Msa0792760:intron	25.0%
!!	ATCACATTTTGGATATTACT+AGG	+	chr5_3:4512408-4512427	Msa0792760:intron	25.0%
!	TTAAAGATGAGTTGTTTAAG+AGG	+	chr5_3:4512557-4512576	Msa0792760:intron	25.0%
!	TTGATTATTGTGTTCTTTGT+TGG	+	chr5_3:4512712-4512731	Msa0792760:intron	25.0%
!!!	TTGTGAATTGTGATGTTTTT+TGG	+	chr5_3:4512779-4512798	Msa0792760:intron	25.0%
!!!	TTGAAAGTTGTGTTCTTTTT+TGG	+	chr5_3:4512831-4512850	Msa0792760:intron	25.0%
!!	TGATATGTAATTGTTTTCGT+GGG	+	chr5_3:4512994-4513013	Msa0792760:intron	25.0%
!!	ATCCTCTTAATTTTGTCATA+TGG	-	chr5_3:4513122-4513141	None:intergenic	25.0%
!	ATATGACAAAATTAAGAGGA+TGG	+	chr5_3:4513121-4513140	Msa0792760:CDS	25.0%
!	GAATTTGAATACTGAATGAT+TGG	+	chr5_3:4513219-4513238	Msa0792760:intron	25.0%
!	TGAATGATTGGATGAAATTA+GGG	+	chr5_3:4513231-4513250	Msa0792760:intron	25.0%
!	TTGTACTTGATAAATAACAG+CGG	+	chr5_3:4513376-4513395	Msa0792760:intron	25.0%
!	AAATACTACTCAGTACTTAA+CGG	-	chr5_3:4513565-4513584	None:intergenic	25.0%
!!!	ATTACTTTTTGATAGTGTGT+TGG	+	chr5_3:4513729-4513748	Msa0792760:three_prime_UTR	25.0%
!!	TGTGTATTTAAGATGCATAT+AGG	+	chr5_3:4513856-4513875	Msa0792760:three_prime_UTR	25.0%
!	ATAATTTGACTATAAGCTGT+AGG	+	chr5_3:4513983-4514002	Msa0792760:three_prime_UTR	25.0%
!	TAATTTGACTATAAGCTGTA+GGG	+	chr5_3:4513984-4514003	Msa0792760:three_prime_UTR	25.0%
	ATATGAGATTTCTTAGGAAG+AGG	+	chr5_3:4512185-4512204	Msa0792760:CDS	30.0%
!	TCATGGTCCTATTCATTTTA+GGG	+	chr5_3:4512225-4512244	Msa0792760:CDS	30.0%
!!	TCGCATTTTTGGATATTACT+AGG	+	chr5_3:4512324-4512343	Msa0792760:intron	30.0%
!	GTGTTATAGTATTTGGTGAA+TGG	+	chr5_3:4512641-4512660	Msa0792760:intron	30.0%
!!!	TGAAGTGTTGTCTTGTTTTT+TGG	+	chr5_3:4512669-4512688	Msa0792760:intron	30.0%
	ATTATTGTGTTCTTTGTTGG+AGG	+	chr5_3:4512715-4512734	Msa0792760:intron	30.0%
	TTATTGTGTTCTTTGTTGGA+GGG	+	chr5_3:4512716-4512735	Msa0792760:intron	30.0%
!!!	TGAATTGTGATGTTTTTTGG+AGG	+	chr5_3:4512782-4512801	Msa0792760:intron	30.0%
!!!	GAATTGTGATGTTTTTTGGA+GGG	+	chr5_3:4512783-4512802	Msa0792760:intron	30.0%
!!!	AAAGTTGTGTTCTTTTTTGG+AGG	+	chr5_3:4512834-4512853	Msa0792760:intron	30.0%
	TTGTATGATGTGTTCTTGTT+TGG	+	chr5_3:4512887-4512906	Msa0792760:intron	30.0%
!	GTGATATGTAATTGTTTTCG+TGG	+	chr5_3:4512993-4513012	Msa0792760:intron	30.0%
!	TTAATTTTGTCATATGGAGG+TGG	-	chr5_3:4513116-4513135	None:intergenic	30.0%
!	CTCTTAATTTTGTCATATGG+AGG	-	chr5_3:4513119-4513138	None:intergenic	30.0%
	CTCCATATGACAAAATTAAG+AGG	+	chr5_3:4513117-4513136	Msa0792760:CDS	30.0%
!!	AATACTTACTTAAGAGCATC+GGG	-	chr5_3:4513152-4513171	None:intergenic	30.0%
!	CAATACTTACTTAAGAGCAT+CGG	-	chr5_3:4513153-4513172	None:intergenic	30.0%
	CTGAATGATTGGATGAAATT+AGG	+	chr5_3:4513230-4513249	Msa0792760:intron	30.0%
	AGAAGCAGATCAATAAATTG+AGG	+	chr5_3:4513481-4513500	Msa0792760:CDS	30.0%
	GAAGCAGATCAATAAATTGA+GGG	+	chr5_3:4513482-4513501	Msa0792760:CDS	30.0%
	AATACTACTCAGTACTTAAC+GGG	-	chr5_3:4513564-4513583	None:intergenic	30.0%
!	ATCGAATTCCATTTCAGTTT+TGG	+	chr5_3:4513622-4513641	Msa0792760:three_prime_UTR	30.0%
	AATAACGACCAAAACTGAAA+TGG	-	chr5_3:4513633-4513652	None:intergenic	30.0%
	GGTCGTTATTTAATGTTTGT+TGG	+	chr5_3:4513643-4513662	Msa0792760:three_prime_UTR	30.0%
!	TACTCTAGAAATGACAATCT+TGG	+	chr5_3:4513666-4513685	Msa0792760:three_prime_UTR	30.0%
!	CGTATATTTGGATTTGTTTG+TGG	+	chr5_3:4513768-4513787	Msa0792760:three_prime_UTR	30.0%
	CTTTATGTTAGTTGTTCGAT+TGG	+	chr5_3:4513809-4513828	Msa0792760:three_prime_UTR	30.0%
	GCAATCGAAGCAATATTATA+AGG	+	chr5_3:4513940-4513959	Msa0792760:three_prime_UTR	30.0%
	TGAAATTTGAAAGACAACCA+TGG	-	chr5_3:4514020-4514039	None:intergenic	30.0%
	ATATGAGATTTCTTAGGAAG+AGG	+	chr5_3:4512185-4512204	Msa0792760:CDS	30.0%
!	TCATGGTCCTATTCATTTTA+GGG	+	chr5_3:4512225-4512244	Msa0792760:CDS	30.0%
!!	TCGCATTTTTGGATATTACT+AGG	+	chr5_3:4512324-4512343	Msa0792760:intron	30.0%
!	GTGTTATAGTATTTGGTGAA+TGG	+	chr5_3:4512641-4512660	Msa0792760:intron	30.0%
!!!	TGAAGTGTTGTCTTGTTTTT+TGG	+	chr5_3:4512669-4512688	Msa0792760:intron	30.0%
	ATTATTGTGTTCTTTGTTGG+AGG	+	chr5_3:4512715-4512734	Msa0792760:intron	30.0%
	TTATTGTGTTCTTTGTTGGA+GGG	+	chr5_3:4512716-4512735	Msa0792760:intron	30.0%
!!!	TGAATTGTGATGTTTTTTGG+AGG	+	chr5_3:4512782-4512801	Msa0792760:intron	30.0%
!!!	GAATTGTGATGTTTTTTGGA+GGG	+	chr5_3:4512783-4512802	Msa0792760:intron	30.0%
!!!	AAAGTTGTGTTCTTTTTTGG+AGG	+	chr5_3:4512834-4512853	Msa0792760:intron	30.0%
	TTGTATGATGTGTTCTTGTT+TGG	+	chr5_3:4512887-4512906	Msa0792760:intron	30.0%
!	GTGATATGTAATTGTTTTCG+TGG	+	chr5_3:4512993-4513012	Msa0792760:intron	30.0%
!	TTAATTTTGTCATATGGAGG+TGG	-	chr5_3:4513116-4513135	None:intergenic	30.0%
!	CTCTTAATTTTGTCATATGG+AGG	-	chr5_3:4513119-4513138	None:intergenic	30.0%
	CTCCATATGACAAAATTAAG+AGG	+	chr5_3:4513117-4513136	Msa0792760:CDS	30.0%
!!	AATACTTACTTAAGAGCATC+GGG	-	chr5_3:4513152-4513171	None:intergenic	30.0%
!	CAATACTTACTTAAGAGCAT+CGG	-	chr5_3:4513153-4513172	None:intergenic	30.0%
	CTGAATGATTGGATGAAATT+AGG	+	chr5_3:4513230-4513249	Msa0792760:intron	30.0%
	AGAAGCAGATCAATAAATTG+AGG	+	chr5_3:4513481-4513500	Msa0792760:CDS	30.0%
	GAAGCAGATCAATAAATTGA+GGG	+	chr5_3:4513482-4513501	Msa0792760:CDS	30.0%
	AATACTACTCAGTACTTAAC+GGG	-	chr5_3:4513564-4513583	None:intergenic	30.0%
!	ATCGAATTCCATTTCAGTTT+TGG	+	chr5_3:4513622-4513641	Msa0792760:three_prime_UTR	30.0%
	AATAACGACCAAAACTGAAA+TGG	-	chr5_3:4513633-4513652	None:intergenic	30.0%
	GGTCGTTATTTAATGTTTGT+TGG	+	chr5_3:4513643-4513662	Msa0792760:three_prime_UTR	30.0%
!	TACTCTAGAAATGACAATCT+TGG	+	chr5_3:4513666-4513685	Msa0792760:three_prime_UTR	30.0%
!	CGTATATTTGGATTTGTTTG+TGG	+	chr5_3:4513768-4513787	Msa0792760:three_prime_UTR	30.0%
	CTTTATGTTAGTTGTTCGAT+TGG	+	chr5_3:4513809-4513828	Msa0792760:three_prime_UTR	30.0%
	GCAATCGAAGCAATATTATA+AGG	+	chr5_3:4513940-4513959	Msa0792760:three_prime_UTR	30.0%
	TGAAATTTGAAAGACAACCA+TGG	-	chr5_3:4514020-4514039	None:intergenic	30.0%
	GATCTTCTTCTTCTTCTTTG+TGG	-	chr5_3:4511982-4512001	None:intergenic	35.0%
	AGAAGAAGATCGAGCAAAAA+TGG	+	chr5_3:4511991-4512010	Msa0792760:exon	35.0%
	AAATGAATAGGACCATGAGA+AGG	-	chr5_3:4512223-4512242	None:intergenic	35.0%
!	CTCATGGTCCTATTCATTTT+AGG	+	chr5_3:4512224-4512243	Msa0792760:CDS	35.0%
!	TATGATGTGTTCTTGTTTGG+AGG	+	chr5_3:4512890-4512909	Msa0792760:intron	35.0%
!	ATGATGTGTTCTTGTTTGGA+GGG	+	chr5_3:4512891-4512910	Msa0792760:intron	35.0%
!	TGAGTGATCTGTTGTTGTTA+TGG	+	chr5_3:4512936-4512955	Msa0792760:intron	35.0%
!	TGATCTGTTGTTGTTATGGA+GGG	+	chr5_3:4512940-4512959	Msa0792760:intron	35.0%
	TTGGTGTAACGTCGTATATT+TGG	+	chr5_3:4513756-4513775	Msa0792760:three_prime_UTR	35.0%
!	TCAGTACCAGAGTATTAAGA+CGG	-	chr5_3:4513899-4513918	None:intergenic	35.0%
	TATCAGCTTATGACGAAACT+CGG	-	chr5_3:4513966-4513985	None:intergenic	35.0%
	CAAGATTCTCAGAATTCTGA+TGG	+	chr5_3:4514066-4514085	Msa0792760:three_prime_UTR	35.0%
	ATATCAGCTAAACGATGCAT+AGG	+	chr5_3:4514089-4514108	Msa0792760:three_prime_UTR	35.0%
	GATCTTCTTCTTCTTCTTTG+TGG	-	chr5_3:4511982-4512001	None:intergenic	35.0%
	AGAAGAAGATCGAGCAAAAA+TGG	+	chr5_3:4511991-4512010	Msa0792760:exon	35.0%
	AAATGAATAGGACCATGAGA+AGG	-	chr5_3:4512223-4512242	None:intergenic	35.0%
!	CTCATGGTCCTATTCATTTT+AGG	+	chr5_3:4512224-4512243	Msa0792760:CDS	35.0%
!	TATGATGTGTTCTTGTTTGG+AGG	+	chr5_3:4512890-4512909	Msa0792760:intron	35.0%
!	ATGATGTGTTCTTGTTTGGA+GGG	+	chr5_3:4512891-4512910	Msa0792760:intron	35.0%
!	TGAGTGATCTGTTGTTGTTA+TGG	+	chr5_3:4512936-4512955	Msa0792760:intron	35.0%
!	TGATCTGTTGTTGTTATGGA+GGG	+	chr5_3:4512940-4512959	Msa0792760:intron	35.0%
	TTGGTGTAACGTCGTATATT+TGG	+	chr5_3:4513756-4513775	Msa0792760:three_prime_UTR	35.0%
!	TCAGTACCAGAGTATTAAGA+CGG	-	chr5_3:4513899-4513918	None:intergenic	35.0%
	TATCAGCTTATGACGAAACT+CGG	-	chr5_3:4513966-4513985	None:intergenic	35.0%
	CAAGATTCTCAGAATTCTGA+TGG	+	chr5_3:4514066-4514085	Msa0792760:three_prime_UTR	35.0%
	ATATCAGCTAAACGATGCAT+AGG	+	chr5_3:4514089-4514108	Msa0792760:three_prime_UTR	35.0%
	TCTTCTTCTTCTTTGTGGCT+CGG	-	chr5_3:4511977-4511996	None:intergenic	40.0%
	TGTGAAGAGATTTGTGCTTC+TGG	+	chr5_3:4512136-4512155	Msa0792760:CDS	40.0%
	ATGAACACAAAGCCTTCTCA+TGG	+	chr5_3:4512208-4512227	Msa0792760:CDS	40.0%
	GTACGCCAAAAGATCTTACT+GGG	-	chr5_3:4512253-4512272	None:intergenic	40.0%
	AGTACGCCAAAAGATCTTAC+TGG	-	chr5_3:4512254-4512273	None:intergenic	40.0%
!	GTGATCTGTTGTTGTTATGG+AGG	+	chr5_3:4512939-4512958	Msa0792760:intron	40.0%
!!	TGGATGAAATTAGGGTGTTG+AGG	+	chr5_3:4513239-4513258	Msa0792760:intron	40.0%
!	ACCATCAAGGTGCGTTATTT+TGG	+	chr5_3:4513331-4513350	Msa0792760:intron	40.0%
	ACCAAAATAACGCACCTTGA+TGG	-	chr5_3:4513335-4513354	None:intergenic	40.0%
	TTTCTCTTGTTAACAGGAGC+TGG	+	chr5_3:4513416-4513435	Msa0792760:intron	40.0%
!!	GGAGCAAGAATTTCAAGTTG+GGG	-	chr5_3:4513543-4513562	None:intergenic	40.0%
!!	GGGAGCAAGAATTTCAAGTT+GGG	-	chr5_3:4513544-4513563	None:intergenic	40.0%
!!	TTGATAGTGTGTTGGCTCTT+TGG	+	chr5_3:4513737-4513756	Msa0792760:three_prime_UTR	40.0%
	CACAATATTCAGTCTCCTAG+AGG	-	chr5_3:4513840-4513859	None:intergenic	40.0%
!	AGAGTATTAAGACGGACACA+AGG	-	chr5_3:4513891-4513910	None:intergenic	40.0%
	TTGTGTCCGTCTTAATACTC+TGG	+	chr5_3:4513890-4513909	Msa0792760:three_prime_UTR	40.0%
	TGTAGGGATTTAGACTACCA+TGG	+	chr5_3:4514000-4514019	Msa0792760:three_prime_UTR	40.0%
	TCTTCTTCTTCTTTGTGGCT+CGG	-	chr5_3:4511977-4511996	None:intergenic	40.0%
	TGTGAAGAGATTTGTGCTTC+TGG	+	chr5_3:4512136-4512155	Msa0792760:CDS	40.0%
	ATGAACACAAAGCCTTCTCA+TGG	+	chr5_3:4512208-4512227	Msa0792760:CDS	40.0%
	GTACGCCAAAAGATCTTACT+GGG	-	chr5_3:4512253-4512272	None:intergenic	40.0%
	AGTACGCCAAAAGATCTTAC+TGG	-	chr5_3:4512254-4512273	None:intergenic	40.0%
!	GTGATCTGTTGTTGTTATGG+AGG	+	chr5_3:4512939-4512958	Msa0792760:intron	40.0%
!!	TGGATGAAATTAGGGTGTTG+AGG	+	chr5_3:4513239-4513258	Msa0792760:intron	40.0%
!	ACCATCAAGGTGCGTTATTT+TGG	+	chr5_3:4513331-4513350	Msa0792760:intron	40.0%
	ACCAAAATAACGCACCTTGA+TGG	-	chr5_3:4513335-4513354	None:intergenic	40.0%
	TTTCTCTTGTTAACAGGAGC+TGG	+	chr5_3:4513416-4513435	Msa0792760:intron	40.0%
!!	GGAGCAAGAATTTCAAGTTG+GGG	-	chr5_3:4513543-4513562	None:intergenic	40.0%
!!	GGGAGCAAGAATTTCAAGTT+GGG	-	chr5_3:4513544-4513563	None:intergenic	40.0%
!!	TTGATAGTGTGTTGGCTCTT+TGG	+	chr5_3:4513737-4513756	Msa0792760:three_prime_UTR	40.0%
	CACAATATTCAGTCTCCTAG+AGG	-	chr5_3:4513840-4513859	None:intergenic	40.0%
!	AGAGTATTAAGACGGACACA+AGG	-	chr5_3:4513891-4513910	None:intergenic	40.0%
	TTGTGTCCGTCTTAATACTC+TGG	+	chr5_3:4513890-4513909	Msa0792760:three_prime_UTR	40.0%
	TGTAGGGATTTAGACTACCA+TGG	+	chr5_3:4514000-4514019	Msa0792760:three_prime_UTR	40.0%
	GATCGAGCAAAAATGGTGTC+TGG	+	chr5_3:4511998-4512017	Msa0792760:exon	45.0%
!	GCAAAAATGGTGTCTGGTTC+AGG	+	chr5_3:4512004-4512023	Msa0792760:exon	45.0%
	TTCAGGTATCTGCGCAAAGA+GGG	+	chr5_3:4512021-4512040	Msa0792760:CDS	45.0%
	AGGCAAGTCTACCTAACATG+TGG	-	chr5_3:4512066-4512085	None:intergenic	45.0%
	GTTGCAAAGGAGCTTCTCAA+TGG	+	chr5_3:4512091-4512110	Msa0792760:CDS	45.0%
	GAAGAGATTTGTGCTTCTGG+TGG	+	chr5_3:4512139-4512158	Msa0792760:CDS	45.0%
	CTGGGAGCCCTAAAATGAAT+AGG	-	chr5_3:4512235-4512254	None:intergenic	45.0%
!	ATCTTTTGGCGTACTGTTCG+TGG	+	chr5_3:4512259-4512278	Msa0792760:CDS	45.0%
!	TCTTTTGGCGTACTGTTCGT+GGG	+	chr5_3:4512260-4512279	Msa0792760:CDS	45.0%
	ATTCCACACAAGACAAAGCG+TGG	+	chr5_3:4513050-4513069	Msa0792760:CDS	45.0%
	ACCTTCATACACCTTCATCC+TGG	-	chr5_3:4513090-4513109	None:intergenic	45.0%
!!	TAGGGTGTTGAGGCTTCAAA+AGG	+	chr5_3:4513249-4513268	Msa0792760:intron	45.0%
!!	AGGGTGTTGAGGCTTCAAAA+GGG	+	chr5_3:4513250-4513269	Msa0792760:intron	45.0%
	CTCTGCTGACAATTGTCCAA+GGG	-	chr5_3:4513290-4513309	None:intergenic	45.0%
	AATTGTCAGCAGAGGTTGGA+TGG	+	chr5_3:4513296-4513315	Msa0792760:CDS	45.0%
	TGGAGACAAAGAGGAAGGAA+AGG	+	chr5_3:4513436-4513455	Msa0792760:CDS	45.0%
	GGAGACAAAGAGGAAGGAAA+GGG	+	chr5_3:4513437-4513456	Msa0792760:CDS	45.0%
!	CGGGAGCAAGAATTTCAAGT+TGG	-	chr5_3:4513545-4513564	None:intergenic	45.0%
!!!	GTTCGATTGGTTTTGCCTCT+AGG	+	chr5_3:4513822-4513841	Msa0792760:three_prime_UTR	45.0%
	GATCGAGCAAAAATGGTGTC+TGG	+	chr5_3:4511998-4512017	Msa0792760:exon	45.0%
!	GCAAAAATGGTGTCTGGTTC+AGG	+	chr5_3:4512004-4512023	Msa0792760:exon	45.0%
	TTCAGGTATCTGCGCAAAGA+GGG	+	chr5_3:4512021-4512040	Msa0792760:CDS	45.0%
	AGGCAAGTCTACCTAACATG+TGG	-	chr5_3:4512066-4512085	None:intergenic	45.0%
	GTTGCAAAGGAGCTTCTCAA+TGG	+	chr5_3:4512091-4512110	Msa0792760:CDS	45.0%
	GAAGAGATTTGTGCTTCTGG+TGG	+	chr5_3:4512139-4512158	Msa0792760:CDS	45.0%
	CTGGGAGCCCTAAAATGAAT+AGG	-	chr5_3:4512235-4512254	None:intergenic	45.0%
!	ATCTTTTGGCGTACTGTTCG+TGG	+	chr5_3:4512259-4512278	Msa0792760:CDS	45.0%
!	TCTTTTGGCGTACTGTTCGT+GGG	+	chr5_3:4512260-4512279	Msa0792760:CDS	45.0%
	ATTCCACACAAGACAAAGCG+TGG	+	chr5_3:4513050-4513069	Msa0792760:CDS	45.0%
	ACCTTCATACACCTTCATCC+TGG	-	chr5_3:4513090-4513109	None:intergenic	45.0%
!!	TAGGGTGTTGAGGCTTCAAA+AGG	+	chr5_3:4513249-4513268	Msa0792760:intron	45.0%
!!	AGGGTGTTGAGGCTTCAAAA+GGG	+	chr5_3:4513250-4513269	Msa0792760:intron	45.0%
	CTCTGCTGACAATTGTCCAA+GGG	-	chr5_3:4513290-4513309	None:intergenic	45.0%
	AATTGTCAGCAGAGGTTGGA+TGG	+	chr5_3:4513296-4513315	Msa0792760:CDS	45.0%
	TGGAGACAAAGAGGAAGGAA+AGG	+	chr5_3:4513436-4513455	Msa0792760:CDS	45.0%
	GGAGACAAAGAGGAAGGAAA+GGG	+	chr5_3:4513437-4513456	Msa0792760:CDS	45.0%
!	CGGGAGCAAGAATTTCAAGT+TGG	-	chr5_3:4513545-4513564	None:intergenic	45.0%
!!!	GTTCGATTGGTTTTGCCTCT+AGG	+	chr5_3:4513822-4513841	Msa0792760:three_prime_UTR	45.0%
	GTTCAGGTATCTGCGCAAAG+AGG	+	chr5_3:4512020-4512039	Msa0792760:CDS	50.0%
!	GATGCAAGGCACCACATGTT+AGG	+	chr5_3:4512052-4512071	Msa0792760:CDS	50.0%
	ACTTGCCTCCATCGTTGCAA+AGG	+	chr5_3:4512078-4512097	Msa0792760:CDS	50.0%
	AAGCTCCTTTGCAACGATGG+AGG	-	chr5_3:4512086-4512105	None:intergenic	50.0%
	GAGAAGCTCCTTTGCAACGA+TGG	-	chr5_3:4512089-4512108	None:intergenic	50.0%
	GGAGCTTCTCAATGGACAGA+AGG	+	chr5_3:4512099-4512118	Msa0792760:CDS	50.0%
!!	GTGCTTCTGGTGGTCTTGTT+AGG	+	chr5_3:4512149-4512168	Msa0792760:CDS	50.0%
!	GGGCTCCCAGTAAGATCTTT+TGG	+	chr5_3:4512245-4512264	Msa0792760:CDS	50.0%
	TCTCCACGCTTTGTCTTGTG+TGG	-	chr5_3:4513056-4513075	None:intergenic	50.0%
	ACACAAGACAAAGCGTGGAG+AGG	+	chr5_3:4513055-4513074	Msa0792760:CDS	50.0%
!	GCCAGGATGAAGGTGTATGA+AGG	+	chr5_3:4513086-4513105	Msa0792760:CDS	50.0%
	GGTCACAAATACTGCACCCT+TGG	+	chr5_3:4513271-4513290	Msa0792760:CDS	50.0%
	CCTCTGCTGACAATTGTCCA+AGG	-	chr5_3:4513291-4513310	None:intergenic	50.0%
	CCTTGGACAATTGTCAGCAG+AGG	+	chr5_3:4513288-4513307	Msa0792760:CDS	50.0%
	GGACAATTGTCAGCAGAGGT+TGG	+	chr5_3:4513292-4513311	Msa0792760:CDS	50.0%
!!	ATAACGCACCTTGATGGTGC+CGG	-	chr5_3:4513329-4513348	None:intergenic	50.0%
	AACAGGAGCTGGAGACAAAG+AGG	+	chr5_3:4513427-4513446	Msa0792760:intron	50.0%
	GTTCAGGTATCTGCGCAAAG+AGG	+	chr5_3:4512020-4512039	Msa0792760:CDS	50.0%
!	GATGCAAGGCACCACATGTT+AGG	+	chr5_3:4512052-4512071	Msa0792760:CDS	50.0%
	ACTTGCCTCCATCGTTGCAA+AGG	+	chr5_3:4512078-4512097	Msa0792760:CDS	50.0%
	AAGCTCCTTTGCAACGATGG+AGG	-	chr5_3:4512086-4512105	None:intergenic	50.0%
	GAGAAGCTCCTTTGCAACGA+TGG	-	chr5_3:4512089-4512108	None:intergenic	50.0%
	GGAGCTTCTCAATGGACAGA+AGG	+	chr5_3:4512099-4512118	Msa0792760:CDS	50.0%
!!	GTGCTTCTGGTGGTCTTGTT+AGG	+	chr5_3:4512149-4512168	Msa0792760:CDS	50.0%
!	GGGCTCCCAGTAAGATCTTT+TGG	+	chr5_3:4512245-4512264	Msa0792760:CDS	50.0%
	TCTCCACGCTTTGTCTTGTG+TGG	-	chr5_3:4513056-4513075	None:intergenic	50.0%
	ACACAAGACAAAGCGTGGAG+AGG	+	chr5_3:4513055-4513074	Msa0792760:CDS	50.0%
!	GCCAGGATGAAGGTGTATGA+AGG	+	chr5_3:4513086-4513105	Msa0792760:CDS	50.0%
	GGTCACAAATACTGCACCCT+TGG	+	chr5_3:4513271-4513290	Msa0792760:CDS	50.0%
	CCTCTGCTGACAATTGTCCA+AGG	-	chr5_3:4513291-4513310	None:intergenic	50.0%
	CCTTGGACAATTGTCAGCAG+AGG	+	chr5_3:4513288-4513307	Msa0792760:CDS	50.0%
	GGACAATTGTCAGCAGAGGT+TGG	+	chr5_3:4513292-4513311	Msa0792760:CDS	50.0%
!!	ATAACGCACCTTGATGGTGC+CGG	-	chr5_3:4513329-4513348	None:intergenic	50.0%
	AACAGGAGCTGGAGACAAAG+AGG	+	chr5_3:4513427-4513446	Msa0792760:intron	50.0%
	AGGTATCTGCGCAAAGAGGG+TGG	+	chr5_3:4512024-4512043	Msa0792760:CDS	55.0%
	AGAGGGTGGTGATCGATGCA+AGG	+	chr5_3:4512038-4512057	Msa0792760:CDS	55.0%
	GAGGTTGGATGGAACTACGC+CGG	+	chr5_3:4513307-4513326	Msa0792760:CDS	55.0%
	GGAGCTGGAGACAAAGAGGA+AGG	+	chr5_3:4513431-4513450	Msa0792760:intron	55.0%
	AGGTATCTGCGCAAAGAGGG+TGG	+	chr5_3:4512024-4512043	Msa0792760:CDS	55.0%
	AGAGGGTGGTGATCGATGCA+AGG	+	chr5_3:4512038-4512057	Msa0792760:CDS	55.0%
	GAGGTTGGATGGAACTACGC+CGG	+	chr5_3:4513307-4513326	Msa0792760:CDS	55.0%
	GGAGCTGGAGACAAAGAGGA+AGG	+	chr5_3:4513431-4513450	Msa0792760:intron	55.0%
	GGCTGCACTTGCCAGGATGA+AGG	+	chr5_3:4513076-4513095	Msa0792760:CDS	60.0%
	GAACTACGCCGGCACCATCA+AGG	+	chr5_3:4513318-4513337	Msa0792760:CDS	60.0%
	GGCTGCACTTGCCAGGATGA+AGG	+	chr5_3:4513076-4513095	Msa0792760:CDS	60.0%
	GAACTACGCCGGCACCATCA+AGG	+	chr5_3:4513318-4513337	Msa0792760:CDS	60.0%
	GTGGAGAGGCTGCACTTGCC+AGG	+	chr5_3:4513069-4513088	Msa0792760:CDS	65.0%
	GTGGAGAGGCTGCACTTGCC+AGG	+	chr5_3:4513069-4513088	Msa0792760:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_3	gene	4511972	4514113	4511972	ID=Msa0792760;Name=Msa0792760
chr5_3	mRNA	4511972	4514113	4511972	ID=Msa0792760-mRNA-1;Parent=Msa0792760;Name=Msa0792760-mRNA-1;_AED=0.02;_eAED=0.02;_QI=38\|1\|1\|1\|1\|1\|4\|538\|206
chr5_3	exon	4511972	4512281	4511972	ID=Msa0792760-mRNA-1:exon:1755;Parent=Msa0792760-mRNA-1
chr5_3	exon	4513046	4513162	4513046	ID=Msa0792760-mRNA-1:exon:1756;Parent=Msa0792760-mRNA-1
chr5_3	exon	4513252	4513339	4513252	ID=Msa0792760-mRNA-1:exon:1757;Parent=Msa0792760-mRNA-1
chr5_3	exon	4513432	4514113	4513432	ID=Msa0792760-mRNA-1:exon:1758;Parent=Msa0792760-mRNA-1
chr5_3	five_prime_UTR	4511972	4512009	4511972	ID=Msa0792760-mRNA-1:five_prime_utr;Parent=Msa0792760-mRNA-1
chr5_3	CDS	4512010	4512281	4512010	ID=Msa0792760-mRNA-1:cds;Parent=Msa0792760-mRNA-1
chr5_3	CDS	4513046	4513162	4513046	ID=Msa0792760-mRNA-1:cds;Parent=Msa0792760-mRNA-1
chr5_3	CDS	4513252	4513339	4513252	ID=Msa0792760-mRNA-1:cds;Parent=Msa0792760-mRNA-1
chr5_3	CDS	4513432	4513575	4513432	ID=Msa0792760-mRNA-1:cds;Parent=Msa0792760-mRNA-1
chr5_3	three_prime_UTR	4513576	4514113	4513576	ID=Msa0792760-mRNA-1:three_prime_utr;Parent=Msa0792760-mRNA-1

Gene Sequence

>Msa0792760

ATGGTGTCTGGTTCAGGTATCTGCGCAAAGAGGGTGGTGATCGATGCAAGGCACCACATGTTAGGTAGACTTGCCTCCATCGTTGCAAAGGAGCTTCTCAATGGACAGAAGGTTGTTCTTGTTAGATGTGAAGAGATTTGTGCTTCTGGTGGTCTTGTTAGGCAGAAGATGAAGTATATGAGATTTCTTAGGAAGAGGATGAACACAAAGCCTTCTCATGGTCCTATTCATTTTAGGGCTCCCAGTAAGATCTTTTGGCGTACTGTTCGTGGAATGATTCCACACAAGACAAAGCGTGGAGAGGCTGCACTTGCCAGGATGAAGGTGTATGAAGGTATTCCACCTCCATATGACAAAATTAAGAGGATGGTTGTTCCCGATGCTCTTAAGGTGTTGAGGCTTCAAAAGGGTCACAAATACTGCACCCTTGGACAATTGTCAGCAGAGGTTGGATGGAACTACGCCGGCACCATCAAGGAGCTGGAGACAAAGAGGAAGGAAAGGGCTTTTGCTGCTTATGAGAAAAAGAAGCAGATCAATAAATTGAGGGCTAAAGCAGAGAAGATTGTAGACGAGAAGCTTGCACCCCAACTTGAAATTCTTGCTCCCGTTAAGTACTGA

Protein sequence

>Msa0792760

MVSGSGICAKRVVIDARHHMLGRLASIVAKELLNGQKVVLVRCEEICASGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGEAALARMKVYEGIPPPYDKIKRMVVPDALKVLRLQKGHKYCTLGQLSAEVGWNYAGTIKELETKRKERAFAAYEKKKQINKLRAKAEKIVDEKLAPQLEILAPVKY*