Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0603320 | XP_013456128.1 | 100.000 | 93 | 0 | 0 | 1 | 93 | 1 | 93 | 2.15e-62 | 194 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0603320 | sp|Q9XGX8|TIM9_MESCR | 79.570 | 93 | 19 | 0 | 1 | 93 | 1 | 93 | 8.09e-53 | 162 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002750 | Msa0603320 | 0.867110 | 1.742092e-65 | -8.615850e-47 |
Msa0002790 | Msa0603320 | 0.873645 | 1.251895e-67 | -8.615850e-47 |
Msa0003720 | Msa0603320 | 0.809842 | 1.549465e-50 | -8.615850e-47 |
Msa0003780 | Msa0603320 | 0.855144 | 7.683052e-62 | -8.615850e-47 |
Msa0007850 | Msa0603320 | 0.820312 | 7.330371e-53 | -8.615850e-47 |
Msa0019390 | Msa0603320 | 0.808204 | 3.474704e-50 | -8.615850e-47 |
Msa0022970 | Msa0603320 | 0.880729 | 4.319271e-70 | -8.615850e-47 |
Msa0027260 | Msa0603320 | 0.843981 | 1.002647e-58 | -8.615850e-47 |
Msa0029260 | Msa0603320 | 0.808639 | 2.805105e-50 | -8.615850e-47 |
Msa0032260 | Msa0603320 | 0.855139 | 7.709188e-62 | -8.615850e-47 |
Msa0033880 | Msa0603320 | 0.807035 | 6.153122e-50 | -8.615850e-47 |
Msa0040690 | Msa0603320 | 0.847406 | 1.180235e-59 | -8.615850e-47 |
Msa0042280 | Msa0603320 | 0.875775 | 2.361323e-68 | -8.615850e-47 |
Msa0043660 | Msa0603320 | 0.835887 | 1.291527e-56 | -8.615850e-47 |
Msa0045730 | Msa0603320 | 0.830835 | 2.347799e-55 | -8.615850e-47 |
Msa0047160 | Msa0603320 | 0.879349 | 1.340166e-69 | -8.615850e-47 |
Msa0048180 | Msa0603320 | 0.875182 | 3.769307e-68 | -8.615850e-47 |
Msa0052610 | Msa0603320 | 0.845344 | 4.306202e-59 | -8.615850e-47 |
Msa0067870 | Msa0603320 | 0.814454 | 1.527756e-51 | -8.615850e-47 |
Msa0074030 | Msa0603320 | 0.832597 | 8.632902e-56 | -8.615850e-47 |
Msa0074320 | Msa0603320 | 0.833296 | 5.786702e-56 | -8.615850e-47 |
Msa0076040 | Msa0603320 | 0.823151 | 1.616487e-53 | -8.615850e-47 |
Msa0079820 | Msa0603320 | 0.815698 | 8.089017e-52 | -8.615850e-47 |
Msa0086750 | Msa0603320 | 0.835506 | 1.612557e-56 | -8.615850e-47 |
Msa0090520 | Msa0603320 | 0.806138 | 9.515060e-50 | -8.615850e-47 |
Msa0091880 | Msa0603320 | 0.829196 | 5.893448e-55 | -8.615850e-47 |
Msa0094470 | Msa0603320 | 0.871760 | 5.343906e-67 | -8.615850e-47 |
Msa0097580 | Msa0603320 | 0.838145 | 3.421941e-57 | -8.615850e-47 |
Msa0097600 | Msa0603320 | 0.851712 | 7.423848e-61 | -8.615850e-47 |
Msa0100740 | Msa0603320 | 0.812064 | 5.116345e-51 | -8.615850e-47 |
Msa0116130 | Msa0603320 | 0.844329 | 8.088238e-59 | -8.615850e-47 |
Msa0116670 | Msa0603320 | 0.838360 | 3.011527e-57 | -8.615850e-47 |
Msa0118710 | Msa0603320 | 0.876489 | 1.340497e-68 | -8.615850e-47 |
Msa0603320 | Msa0608500 | 0.812786 | 3.558116e-51 | -8.615850e-47 |
Msa0603320 | Msa0609000 | 0.801089 | 1.061396e-48 | -8.615850e-47 |
Msa0603320 | Msa0610390 | 0.818062 | 2.384259e-52 | -8.615850e-47 |
Msa0603320 | Msa0612390 | 0.821698 | 3.516788e-53 | -8.615850e-47 |
Msa0603320 | Msa0615440 | 0.861626 | 8.986709e-64 | -8.615850e-47 |
Msa0603320 | Msa0615580 | 0.829026 | 6.478434e-55 | -8.615850e-47 |
Msa0603320 | Msa0620990 | 0.800130 | 1.664626e-48 | -8.615850e-47 |
Msa0603320 | Msa0621950 | 0.845876 | 3.090111e-59 | -8.615850e-47 |
Msa0603320 | Msa0622750 | 0.804653 | 1.948042e-49 | -8.615850e-47 |
Msa0603320 | Msa0623200 | 0.848724 | 5.105780e-60 | -8.615850e-47 |
Msa0603320 | Msa0631250 | 0.801317 | 9.533134e-49 | -8.615850e-47 |
Msa0603320 | Msa0644350 | 0.864061 | 1.593967e-64 | -8.615850e-47 |
Msa0603320 | Msa0650920 | 0.815905 | 7.273863e-52 | -8.615850e-47 |
Msa0603320 | Msa0654870 | 0.819982 | 8.723030e-53 | -8.615850e-47 |
Msa0603320 | Msa0661300 | 0.807623 | 4.618456e-50 | -8.615850e-47 |
Msa0603320 | Msa0666230 | 0.869794 | 2.370496e-66 | -8.615850e-47 |
Msa0603320 | Msa0677290 | 0.816199 | 6.255227e-52 | -8.615850e-47 |
Msa0603320 | Msa0684160 | 0.801676 | 8.047731e-49 | -8.615850e-47 |
Msa0603320 | Msa0689260 | 0.809034 | 2.310125e-50 | -8.615850e-47 |
Msa0603320 | Msa0691900 | 0.821522 | 3.860167e-53 | -8.615850e-47 |
Msa0603320 | Msa0692940 | 0.807775 | 4.285906e-50 | -8.615850e-47 |
Msa0603320 | Msa0698490 | 0.861225 | 1.191706e-63 | -8.615850e-47 |
Msa0603320 | Msa0698660 | 0.861722 | 8.401223e-64 | -8.615850e-47 |
Msa0603320 | Msa0698780 | 0.808463 | 3.059111e-50 | -8.615850e-47 |
Msa0603320 | Msa0698800 | 0.803230 | 3.849444e-49 | -8.615850e-47 |
Msa0603320 | Msa0700860 | 0.805943 | 1.045642e-49 | -8.615850e-47 |
Msa0603320 | Msa0700920 | 0.804737 | 1.871213e-49 | -8.615850e-47 |
Msa0603320 | Msa0705000 | 0.809632 | 1.719187e-50 | -8.615850e-47 |
Msa0603320 | Msa0705040 | 0.807109 | 5.934273e-50 | -8.615850e-47 |
Msa0603320 | Msa0715650 | 0.806912 | 6.533555e-50 | -8.615850e-47 |
Msa0603320 | Msa0719420 | 0.850716 | 1.418876e-60 | -8.615850e-47 |
Msa0603320 | Msa0729200 | 0.846038 | 2.791319e-59 | -8.615850e-47 |
Msa0603320 | Msa0738100 | 0.879094 | 1.649431e-69 | -8.615850e-47 |
Msa0603320 | Msa0750920 | 0.811525 | 6.703246e-51 | -8.615850e-47 |
Msa0603320 | Msa0753140 | 0.830151 | 3.452024e-55 | -8.615850e-47 |
Msa0603320 | Msa0763330 | 0.803526 | 3.342559e-49 | -8.615850e-47 |
Msa0603320 | Msa0769590 | 0.854094 | 1.547770e-61 | -8.615850e-47 |
Msa0603320 | Msa0772480 | 0.824596 | 7.408431e-54 | -8.615850e-47 |
Msa0603320 | Msa0780490 | 0.812614 | 3.879504e-51 | -8.615850e-47 |
Msa0603320 | Msa0785130 | 0.878465 | 2.746679e-69 | -8.615850e-47 |
Msa0603320 | Msa0789680 | 0.851388 | 9.167841e-61 | -8.615850e-47 |
Msa0603320 | Msa0798440 | 0.832436 | 9.465197e-56 | -8.615850e-47 |
Msa0603320 | Msa0802410 | 0.844280 | 8.338795e-59 | -8.615850e-47 |
Msa0603320 | Msa0806880 | 0.866023 | 3.859332e-65 | -8.615850e-47 |
Msa0603320 | Msa0817540 | 0.876161 | 1.740372e-68 | -8.615850e-47 |
Msa0603320 | Msa0819060 | 0.818440 | 1.957935e-52 | -8.615850e-47 |
Msa0603320 | Msa0830540 | 0.806875 | 6.651621e-50 | -8.615850e-47 |
Msa0603320 | Msa0835420 | 0.836212 | 1.068388e-56 | -8.615850e-47 |
Msa0603320 | Msa0859180 | 0.806269 | 8.930086e-50 | -8.615850e-47 |
Msa0603320 | Msa0881290 | 0.831851 | 1.320191e-55 | -8.615850e-47 |
Msa0603320 | Msa0888810 | 0.808487 | 3.023350e-50 | -8.615850e-47 |
Msa0603320 | Msa0902760 | 0.846452 | 2.153144e-59 | -8.615850e-47 |
Msa0603320 | Msa0906780 | 0.803099 | 4.097345e-49 | -8.615850e-47 |
Msa0603320 | Msa0925770 | 0.827696 | 1.356532e-54 | -8.615850e-47 |
Msa0603320 | Msa0933300 | 0.801774 | 7.682820e-49 | -8.615850e-47 |
Msa0603320 | Msa0945480 | 0.803418 | 3.519938e-49 | -8.615850e-47 |
Msa0603320 | Msa0953310 | 0.806175 | 9.346966e-50 | -8.615850e-47 |
Msa0603320 | Msa0960830 | 0.801318 | 9.527476e-49 | -8.615850e-47 |
Msa0603320 | Msa0963020 | 0.801368 | 9.308256e-49 | -8.615850e-47 |
Msa0603320 | Msa0968590 | 0.811736 | 6.029444e-51 | -8.615850e-47 |
Msa0603320 | Msa0970030 | 0.800876 | 1.173522e-48 | -8.615850e-47 |
Msa0603320 | Msa0989540 | 0.847475 | 1.129421e-59 | -8.615850e-47 |
Msa0603320 | Msa0997430 | 0.801574 | 8.444899e-49 | -8.615850e-47 |
Msa0603320 | Msa1006840 | 0.897603 | 1.198020e-76 | -8.615850e-47 |
Msa0603320 | Msa1012740 | 0.822973 | 1.778027e-53 | -8.615850e-47 |
Msa0603320 | Msa1013400 | 0.848038 | 7.907724e-60 | -8.615850e-47 |
Msa0603320 | Msa1019240 | 0.884443 | 1.909668e-71 | -8.615850e-47 |
Msa0603320 | Msa1019260 | 0.880363 | 5.836629e-70 | -8.615850e-47 |
Msa0603320 | Msa1039520 | 0.812082 | 5.071257e-51 | -8.615850e-47 |
Msa0603320 | Msa1043690 | 0.856144 | 3.923822e-62 | -8.615850e-47 |
Msa0603320 | Msa1055410 | 0.816716 | 4.790277e-52 | -8.615850e-47 |
Msa0603320 | Msa1072710 | 0.858329 | 8.877221e-63 | -8.615850e-47 |
Msa0603320 | Msa1077030 | 0.807586 | 4.703112e-50 | -8.615850e-47 |
Msa0603320 | Msa1081150 | 0.839973 | 1.149674e-57 | -8.615850e-47 |
Msa0603320 | Msa1084470 | 0.814465 | 1.519321e-51 | -8.615850e-47 |
Msa0603320 | Msa1088490 | 0.869045 | 4.155529e-66 | -8.615850e-47 |
Msa0603320 | Msa1093330 | 0.811898 | 5.559106e-51 | -8.615850e-47 |
Msa0603320 | Msa1093530 | 0.843481 | 1.364818e-58 | -8.615850e-47 |
Msa0603320 | Msa1104140 | 0.890260 | 1.156710e-73 | -8.615850e-47 |
Msa0603320 | Msa1104210 | 0.877522 | 5.874164e-69 | -8.615850e-47 |
Msa0603320 | Msa1126510 | 0.844173 | 8.904109e-59 | -8.615850e-47 |
Msa0603320 | Msa1126770 | 0.805291 | 1.432734e-49 | -8.615850e-47 |
Msa0603320 | Msa1126830 | 0.813729 | 2.208839e-51 | -8.615850e-47 |
Msa0603320 | Msa1133400 | 0.803677 | 3.109802e-49 | -8.615850e-47 |
Msa0603320 | Msa1135890 | 0.880470 | 5.344199e-70 | -8.615850e-47 |
Msa0603320 | Msa1138870 | 0.811596 | 6.467721e-51 | -8.615850e-47 |
Msa0603320 | Msa1145240 | 0.801103 | 1.054495e-48 | -8.615850e-47 |
Msa0603320 | Msa1165780 | 0.824190 | 9.230981e-54 | -8.615850e-47 |
Msa0603320 | Msa1166860 | 0.852335 | 4.939442e-61 | -8.615850e-47 |
Msa0603320 | Msa1166870 | 0.870368 | 1.538266e-66 | -8.615850e-47 |
Msa0603320 | Msa1179950 | 0.850956 | 1.213706e-60 | -8.615850e-47 |
Msa0603320 | Msa1179980 | 0.855939 | 4.505249e-62 | -8.615850e-47 |
Msa0603320 | Msa1181830 | 0.805353 | 1.390456e-49 | -8.615850e-47 |
Msa0603320 | Msa1181850 | 0.802049 | 6.746953e-49 | -8.615850e-47 |
Msa0603320 | Msa1201830 | 0.802571 | 5.265911e-49 | -8.615850e-47 |
Msa0603320 | Msa1202580 | 0.827493 | 1.517506e-54 | -8.615850e-47 |
Msa0603320 | Msa1207270 | 0.827989 | 1.153618e-54 | -8.615850e-47 |
Msa0603320 | Msa1208020 | 0.831058 | 2.069672e-55 | -8.615850e-47 |
Msa0603320 | Msa1209200 | 0.824871 | 6.380122e-54 | -8.615850e-47 |
Msa0603320 | Msa1209260 | 0.807624 | 4.615312e-50 | -8.615850e-47 |
Msa0603320 | Msa1215820 | 0.859905 | 2.992709e-63 | -8.615850e-47 |
Msa0603320 | Msa1218450 | 0.801001 | 1.106105e-48 | -8.615850e-47 |
Msa0603320 | Msa1218600 | 0.854051 | 1.592414e-61 | -8.615850e-47 |
Msa0603320 | Msa1227690 | 0.816467 | 5.447939e-52 | -8.615850e-47 |
Msa0603320 | Msa1230580 | 0.833470 | 5.236520e-56 | -8.615850e-47 |
Msa0603320 | Msa1237940 | 0.840006 | 1.127695e-57 | -8.615850e-47 |
Msa0603320 | Msa1241190 | 0.802049 | 6.746953e-49 | -8.615850e-47 |
Msa0603320 | Msa1254710 | 0.810308 | 1.229458e-50 | -8.615850e-47 |
Msa0603320 | Msa1257510 | 0.871741 | 5.423984e-67 | -8.615850e-47 |
Msa0603320 | Msa1260530 | 0.834731 | 2.529689e-56 | -8.615850e-47 |
Msa0603320 | Msa1262890 | 0.815073 | 1.114430e-51 | -8.615850e-47 |
Msa0603320 | Msa1264210 | 0.800916 | 1.151172e-48 | -8.615850e-47 |
Msa0603320 | Msa1265630 | 0.879873 | 8.727506e-70 | -8.615850e-47 |
Msa0603320 | Msa1270620 | 0.854833 | 9.459502e-62 | -8.615850e-47 |
Msa0603320 | Msa1270690 | 0.855337 | 6.752608e-62 | -8.615850e-47 |
Msa0603320 | Msa1281190 | 0.830968 | 2.177285e-55 | -8.615850e-47 |
Msa0603320 | Msa1295110 | 0.802853 | 4.606617e-49 | -8.615850e-47 |
Msa0603320 | Msa1305050 | 0.836319 | 1.003500e-56 | -8.615850e-47 |
Msa0603320 | Msa1306990 | 0.834367 | 3.123660e-56 | -8.615850e-47 |
Msa0603320 | Msa1329300 | 0.814665 | 1.372160e-51 | -8.615850e-47 |
Msa0603320 | Msa1331250 | 0.818659 | 1.746970e-52 | -8.615850e-47 |
Msa0603320 | Msa1331710 | 0.875254 | 3.562137e-68 | -8.615850e-47 |
Msa0603320 | Msa1338190 | 0.832825 | 7.578298e-56 | -8.615850e-47 |
Msa0603320 | Msa1341070 | 0.806890 | 6.602861e-50 | -8.615850e-47 |
Msa0603320 | Msa1343260 | 0.840550 | 8.125510e-58 | -8.615850e-47 |
Msa0603320 | Msa1349570 | 0.862537 | 4.724659e-64 | -8.615850e-47 |
Msa0603320 | Msa1351540 | 0.806868 | 6.675309e-50 | -8.615850e-47 |
Msa0603320 | Msa1355700 | 0.835489 | 1.628986e-56 | -8.615850e-47 |
Msa0603320 | Msa1356440 | 0.801888 | 7.280297e-49 | -8.615850e-47 |
Msa0603320 | Msa1358250 | 0.810424 | 1.160633e-50 | -8.615850e-47 |
Msa0603320 | Msa1363330 | 0.894642 | 2.035177e-75 | -8.615850e-47 |
Msa0603320 | Msa1366180 | 0.867970 | 9.236551e-66 | -8.615850e-47 |
Msa0603320 | Msa1369190 | 0.847363 | 1.212630e-59 | -8.615850e-47 |
Msa0603320 | Msa1374060 | 0.804216 | 2.403091e-49 | -8.615850e-47 |
Msa0603320 | Msa1374120 | 0.861175 | 1.233467e-63 | -8.615850e-47 |
Msa0603320 | Msa1379760 | 0.854387 | 1.273411e-61 | -8.615850e-47 |
Msa0603320 | Msa1382560 | 0.802546 | 5.330070e-49 | -8.615850e-47 |
Msa0603320 | Msa1382620 | 0.809877 | 1.522347e-50 | -8.615850e-47 |
Msa0603320 | Msa1386600 | 0.894917 | 1.570678e-75 | -8.615850e-47 |
Msa0603320 | Msa1387410 | 0.856481 | 3.123997e-62 | -8.615850e-47 |
Msa0603320 | Msa1394290 | 0.864529 | 1.138688e-64 | -8.615850e-47 |
Msa0603320 | Msa1399530 | 0.817837 | 2.680140e-52 | -8.615850e-47 |
Msa0603320 | Msa1407070 | 0.800681 | 1.285930e-48 | -8.615850e-47 |
Msa0603320 | Msa1413500 | 0.867172 | 1.664815e-65 | -8.615850e-47 |
Msa0603320 | Msa1426370 | 0.810956 | 8.908005e-51 | -8.615850e-47 |
Msa0603320 | Msa1426490 | 0.854185 | 1.456054e-61 | -8.615850e-47 |
Msa0603320 | Msa1427560 | 0.856503 | 3.079089e-62 | -8.615850e-47 |
Msa0603320 | Msa1432700 | 0.929599 | 5.513906e-93 | -8.615850e-47 |
Msa0603320 | Msa1433310 | 0.843341 | 1.486852e-58 | -8.615850e-47 |
Msa0603320 | Msa1444310 | 0.840899 | 6.582872e-58 | -8.615850e-47 |
Msa0603320 | Msa1448690 | 0.868592 | 5.824569e-66 | -8.615850e-47 |
Msa0603320 | Msa1450280 | 0.851418 | 8.991553e-61 | -8.615850e-47 |
Msa0603320 | Msa1456050 | 0.827992 | 1.151261e-54 | -8.615850e-47 |
Msa0603320 | Msa1457920 | 0.832315 | 1.013848e-55 | -8.615850e-47 |
Msa0603320 | Msa1465260 | 0.819522 | 1.111009e-52 | -8.615850e-47 |
Msa0124690 | Msa0603320 | 0.828145 | 1.058043e-54 | -8.615850e-47 |
Msa0127310 | Msa0603320 | 0.855493 | 6.081085e-62 | -8.615850e-47 |
Msa0127850 | Msa0603320 | 0.805668 | 1.194310e-49 | -8.615850e-47 |
Msa0128860 | Msa0603320 | 0.849716 | 2.704934e-60 | -8.615850e-47 |
Msa0133540 | Msa0603320 | 0.817735 | 2.826067e-52 | -8.615850e-47 |
Msa0137550 | Msa0603320 | 0.827410 | 1.588850e-54 | -8.615850e-47 |
Msa0137990 | Msa0603320 | 0.805785 | 1.128680e-49 | -8.615850e-47 |
Msa0146280 | Msa0603320 | 0.806428 | 8.267140e-50 | -8.615850e-47 |
Msa0146340 | Msa0603320 | 0.846823 | 1.705286e-59 | -8.615850e-47 |
Msa0146770 | Msa0603320 | 0.818669 | 1.737828e-52 | -8.615850e-47 |
Msa0163760 | Msa0603320 | 0.802977 | 4.342726e-49 | -8.615850e-47 |
Msa0165950 | Msa0603320 | 0.818157 | 2.268839e-52 | -8.615850e-47 |
Msa0167480 | Msa0603320 | 0.854827 | 9.499368e-62 | -8.615850e-47 |
Msa0169300 | Msa0603320 | 0.806219 | 9.149304e-50 | -8.615850e-47 |
Msa0173530 | Msa0603320 | 0.837378 | 5.385427e-57 | -8.615850e-47 |
Msa0174730 | Msa0603320 | 0.848770 | 4.960071e-60 | -8.615850e-47 |
Msa0180020 | Msa0603320 | 0.825404 | 4.776205e-54 | -8.615850e-47 |
Msa0181610 | Msa0603320 | 0.821961 | 3.056885e-53 | -8.615850e-47 |
Msa0183900 | Msa0603320 | 0.816518 | 5.305439e-52 | -8.615850e-47 |
Msa0187690 | Msa0603320 | 0.829368 | 5.353200e-55 | -8.615850e-47 |
Msa0187930 | Msa0603320 | 0.868227 | 7.637097e-66 | -8.615850e-47 |
Msa0188350 | Msa0603320 | 0.806610 | 7.566239e-50 | -8.615850e-47 |
Msa0189300 | Msa0603320 | 0.841331 | 5.070729e-58 | -8.615850e-47 |
Msa0189700 | Msa0603320 | 0.829936 | 3.894822e-55 | -8.615850e-47 |
Msa0194540 | Msa0603320 | 0.865153 | 7.261630e-65 | -8.615850e-47 |
Msa0199690 | Msa0603320 | 0.810327 | 1.217802e-50 | -8.615850e-47 |
Msa0202020 | Msa0603320 | 0.831171 | 1.941439e-55 | -8.615850e-47 |
Msa0218830 | Msa0603320 | 0.850105 | 2.105657e-60 | -8.615850e-47 |
Msa0219120 | Msa0603320 | 0.810398 | 1.176011e-50 | -8.615850e-47 |
Msa0220720 | Msa0603320 | 0.816810 | 4.564511e-52 | -8.615850e-47 |
Msa0221030 | Msa0603320 | 0.868211 | 7.728631e-66 | -8.615850e-47 |
Msa0226470 | Msa0603320 | 0.822383 | 2.439716e-53 | -8.615850e-47 |
Msa0227400 | Msa0603320 | 0.800217 | 1.598851e-48 | -8.615850e-47 |
Msa0231100 | Msa0603320 | 0.848960 | 4.392392e-60 | -8.615850e-47 |
Msa0231660 | Msa0603320 | 0.850397 | 1.743931e-60 | -8.615850e-47 |
Msa0232010 | Msa0603320 | 0.831413 | 1.693007e-55 | -8.615850e-47 |
Msa0232080 | Msa0603320 | 0.832223 | 1.068616e-55 | -8.615850e-47 |
Msa0366890 | Msa0603320 | 0.813861 | 2.065538e-51 | -8.615850e-47 |
Msa0369450 | Msa0603320 | 0.824184 | 9.258940e-54 | -8.615850e-47 |
Msa0414800 | Msa0603320 | 0.814493 | 1.497746e-51 | -8.615850e-47 |
Msa0423750 | Msa0603320 | 0.802697 | 4.960289e-49 | -8.615850e-47 |
Msa0443390 | Msa0603320 | 0.868017 | 8.923323e-66 | -8.615850e-47 |
Msa0458060 | Msa0603320 | 0.827159 | 1.825186e-54 | -8.615850e-47 |
Msa0244780 | Msa0603320 | 0.869108 | 3.963277e-66 | -8.615850e-47 |
Msa0258850 | Msa0603320 | 0.821864 | 3.218716e-53 | -8.615850e-47 |
Msa0262310 | Msa0603320 | 0.824594 | 7.415614e-54 | -8.615850e-47 |
Msa0262480 | Msa0603320 | 0.860257 | 2.342522e-63 | -8.615850e-47 |
Msa0264010 | Msa0603320 | 0.814849 | 1.249642e-51 | -8.615850e-47 |
Msa0264570 | Msa0603320 | 0.807631 | 4.600578e-50 | -8.615850e-47 |
Msa0268130 | Msa0603320 | 0.866431 | 2.866797e-65 | -8.615850e-47 |
Msa0269180 | Msa0603320 | 0.804123 | 2.512397e-49 | -8.615850e-47 |
Msa0280430 | Msa0603320 | 0.819656 | 1.035736e-52 | -8.615850e-47 |
Msa0283390 | Msa0603320 | 0.804351 | 2.252304e-49 | -8.615850e-47 |
Msa0289580 | Msa0603320 | 0.849934 | 2.351424e-60 | -8.615850e-47 |
Msa0289610 | Msa0603320 | 0.857148 | 1.988627e-62 | -8.615850e-47 |
Msa0291520 | Msa0603320 | 0.833578 | 4.920543e-56 | -8.615850e-47 |
Msa0298200 | Msa0603320 | 0.827327 | 1.662966e-54 | -8.615850e-47 |
Msa0298990 | Msa0603320 | 0.868973 | 4.382889e-66 | -8.615850e-47 |
Msa0300350 | Msa0603320 | 0.877130 | 8.039438e-69 | -8.615850e-47 |
Msa0304590 | Msa0603320 | 0.815452 | 9.179088e-52 | -8.615850e-47 |
Msa0304660 | Msa0603320 | 0.813779 | 2.153125e-51 | -8.615850e-47 |
Msa0306690 | Msa0603320 | 0.809890 | 1.512876e-50 | -8.615850e-47 |
Msa0313100 | Msa0603320 | 0.818798 | 1.623891e-52 | -8.615850e-47 |
Msa0317910 | Msa0603320 | 0.813105 | 3.028767e-51 | -8.615850e-47 |
Msa0321640 | Msa0603320 | 0.815989 | 6.968957e-52 | -8.615850e-47 |
Msa0327300 | Msa0603320 | 0.871070 | 9.042451e-67 | -8.615850e-47 |
Msa0327330 | Msa0603320 | 0.857454 | 1.614779e-62 | -8.615850e-47 |
Msa0331700 | Msa0603320 | 0.813191 | 2.899951e-51 | -8.615850e-47 |
Msa0336010 | Msa0603320 | 0.833872 | 4.156041e-56 | -8.615850e-47 |
Msa0337240 | Msa0603320 | 0.810110 | 1.356347e-50 | -8.615850e-47 |
Msa0337650 | Msa0603320 | 0.828842 | 7.179983e-55 | -8.615850e-47 |
Msa0348830 | Msa0603320 | 0.835650 | 1.483160e-56 | -8.615850e-47 |
Msa0357900 | Msa0603320 | 0.821983 | 3.019784e-53 | -8.615850e-47 |
Msa0483110 | Msa0603320 | 0.811506 | 6.766907e-51 | -8.615850e-47 |
Msa0508590 | Msa0603320 | 0.800862 | 1.180867e-48 | -8.615850e-47 |
Msa0526540 | Msa0603320 | 0.894730 | 1.872869e-75 | -8.615850e-47 |
Msa0527150 | Msa0603320 | 0.848958 | 4.396539e-60 | -8.615850e-47 |
Msa0531650 | Msa0603320 | 0.840702 | 7.417783e-58 | -8.615850e-47 |
Msa0534750 | Msa0603320 | 0.824975 | 6.032209e-54 | -8.615850e-47 |
Msa0550540 | Msa0603320 | 0.800890 | 1.165581e-48 | -8.615850e-47 |
Msa0550570 | Msa0603320 | 0.806460 | 8.140218e-50 | -8.615850e-47 |
Msa0554290 | Msa0603320 | 0.823885 | 1.088799e-53 | -8.615850e-47 |
Msa0554860 | Msa0603320 | 0.800906 | 1.156639e-48 | -8.615850e-47 |
Msa0558810 | Msa0603320 | 0.810148 | 1.331279e-50 | -8.615850e-47 |
Msa0561430 | Msa0603320 | 0.810385 | 1.183381e-50 | -8.615850e-47 |
Msa0571920 | Msa0603320 | 0.859186 | 4.924416e-63 | -8.615850e-47 |
Msa0576940 | Msa0603320 | 0.893234 | 7.599464e-75 | -8.615850e-47 |
Msa0581070 | Msa0603320 | 0.813742 | 2.193793e-51 | -8.615850e-47 |
Msa0581110 | Msa0603320 | 0.811148 | 8.091420e-51 | -8.615850e-47 |
Msa0581280 | Msa0603320 | 0.829684 | 4.484126e-55 | -8.615850e-47 |
Msa0588360 | Msa0603320 | 0.841305 | 5.150927e-58 | -8.615850e-47 |
Msa0600600 | Msa0603320 | 0.812873 | 3.405302e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0603320 | MtrunA17_Chr4g0031531 | 100.000 | 93 | 0 | 0 | 1 | 93 | 1 | 93 | 1.98e-66 | 194 |
Msa0603320 | MtrunA17_Chr4g0009801 | 59.140 | 93 | 38 | 0 | 1 | 93 | 1 | 93 | 1.75e-40 | 129 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0603320 | AT3G46560.1 | 78.495 | 93 | 20 | 0 | 1 | 93 | 1 | 93 | 4.58e-51 | 155 |
Find 30 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACGATTATACGCAGTGATTT+AGG | 0.125954 | 4_2:-47807537 | None:intergenic |
CAAAAGCATGATTGCTGATA+TGG | 0.238381 | 4_2:+47807575 | Msa0603320:CDS |
TCTTCTTCCACACTTGAGTT+AGG | 0.270806 | 4_2:+47807475 | Msa0603320:five_prime_UTR |
CGATTATACGCAGTGATTTA+GGG | 0.278105 | 4_2:-47807536 | None:intergenic |
TATAATCGTTCGATCCAAAA+TGG | 0.326606 | 4_2:+47807551 | Msa0603320:exon |
AACCTCACCTGTCACGGATT+TGG | 0.342119 | 4_2:-47807650 | None:intergenic |
TGAATAGTGATACTAAATAT+TGG | 0.363478 | 4_2:-47811236 | None:intergenic |
CTTCTTCCACACTTGAGTTA+GGG | 0.373451 | 4_2:+47807476 | Msa0603320:five_prime_UTR |
TGAGTTAGGGTTTATCTTTA+CGG | 0.378081 | 4_2:+47807489 | Msa0603320:five_prime_UTR |
CCAGGTTATTATACATTCTC+AGG | 0.398941 | 4_2:-47810852 | None:intergenic |
AATCTTGAGTTGCAGCTCCT+TGG | 0.400935 | 4_2:-47811014 | None:intergenic |
ATTCTTTGTTTATCAGCCTC+TGG | 0.451877 | 4_2:-47807606 | None:intergenic |
AGAGGCTGATAAACAAAGAA+TGG | 0.503860 | 4_2:+47807608 | Msa0603320:CDS |
ATCAGCTCCAAATCCGTGAC+AGG | 0.514968 | 4_2:+47807643 | Msa0603320:CDS |
CTCTGCACATCTTCGAACAC+AGG | 0.526331 | 4_2:-47810941 | None:intergenic |
TTTGGGAACCTCACCTGTCA+CGG | 0.540460 | 4_2:-47807656 | None:intergenic |
CTGAAGCACTCTATGCGTGT+TGG | 0.545186 | 4_2:+47810970 | Msa0603320:CDS |
GATTTGGAGCTGATCGATCA+TGG | 0.557131 | 4_2:-47807634 | None:intergenic |
CCTGAGAATGTATAATAACC+TGG | 0.571370 | 4_2:+47810852 | Msa0603320:CDS |
CATGAAAGCATCTCTCCACC+AGG | 0.576768 | 4_2:-47810870 | None:intergenic |
ACTCTATGCGTGTTGGCATG+AGG | 0.597417 | 4_2:+47810977 | Msa0603320:CDS |
TAAATCCCTGCAAAAGCAAG+AGG | 0.610554 | 4_2:+47810915 | Msa0603320:CDS |
GGAGCTGCAACTCAAGATTG+AGG | 0.617510 | 4_2:+47811018 | Msa0603320:CDS |
GATAAACCCTAACTCAAGTG+TGG | 0.619830 | 4_2:-47807482 | None:intergenic |
ATATTGGCAATCAAGAATGA+CGG | 0.650436 | 4_2:-47811220 | None:intergenic |
AGGTTTGCTGAGCTCAACCA+AGG | 0.659807 | 4_2:+47810997 | Msa0603320:CDS |
GAGATGCTTTCATGATTGTG+TGG | 0.661772 | 4_2:+47810879 | Msa0603320:CDS |
AAGAAGATGATATATATACT+AGG | 0.665897 | 4_2:-47807459 | None:intergenic |
TGATATGGAAAATCTTCCAG+AGG | 0.691125 | 4_2:+47807590 | Msa0603320:CDS |
GAGAATGTATAATAACCTGG+TGG | 0.692374 | 4_2:+47810855 | Msa0603320:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TCATGTTATTTTTATTTTTT+TGG | + | chr4_2:47808553-47808572 | Msa0603320:intron | 10.0% |
!!! | TCATATATATTTTAAGATAT+AGG | + | chr4_2:47808582-47808601 | Msa0603320:intron | 10.0% |
!! | TAATAAATTAAGATTTAAAC+TGG | + | chr4_2:47808866-47808885 | Msa0603320:intron | 10.0% |
!!! | AGATTAATTTTTCAAATTTT+TGG | + | chr4_2:47808899-47808918 | Msa0603320:intron | 10.0% |
!!! | GATTAATTTTTCAAATTTTT+GGG | + | chr4_2:47808900-47808919 | Msa0603320:intron | 10.0% |
!! | TAATTTATTAGAACTTATAA+CGG | - | chr4_2:47810646-47810665 | None:intergenic | 10.0% |
!!! | ATAATGTGTTGAATTTATTT+TGG | + | chr4_2:47807823-47807842 | Msa0603320:intron | 15.0% |
!!! | TTGAATTTATTTTGGAATTT+GGG | + | chr4_2:47807831-47807850 | Msa0603320:intron | 15.0% |
!! | ATATAATGTTCTATTTAATG+TGG | + | chr4_2:47808205-47808224 | Msa0603320:intron | 15.0% |
!! | CTTAATTTATTAGACTTTAT+TGG | - | chr4_2:47808858-47808877 | None:intergenic | 15.0% |
!! | AATTACTTGTTCATTAAATT+GGG | + | chr4_2:47809164-47809183 | Msa0603320:intron | 15.0% |
!! | ACATTAAATAGATCATTAAA+CGG | - | chr4_2:47809229-47809248 | None:intergenic | 15.0% |
!!! | TGAATCTTTTTTAAAATTTG+AGG | + | chr4_2:47809692-47809711 | Msa0603320:intron | 15.0% |
!! | AATAATTTGAGCTTATTTAT+TGG | - | chr4_2:47810470-47810489 | None:intergenic | 15.0% |
!! | AAAGTCATATGTAAAATAAA+CGG | - | chr4_2:47810696-47810715 | None:intergenic | 15.0% |
!! | AAGAAGATGATATATATACT+AGG | - | chr4_2:47807462-47807481 | None:intergenic | 20.0% |
!! | AAAAAAACCTAAACTTTACA+AGG | - | chr4_2:47807773-47807792 | None:intergenic | 20.0% |
!!! | GTTGAATTTATTTTGGAATT+TGG | + | chr4_2:47807830-47807849 | Msa0603320:intron | 20.0% |
!!! | TGAATTTATTTTGGAATTTG+GGG | + | chr4_2:47807832-47807851 | Msa0603320:intron | 20.0% |
!!! | CATCGTAATTTGTAAATAAT+TGG | + | chr4_2:47807858-47807877 | Msa0603320:intron | 20.0% |
!! | TTGGTTTCATAAAATATTAG+TGG | + | chr4_2:47808742-47808761 | Msa0603320:intron | 20.0% |
!!! | TTGAATCTGTTTTTATATTG+AGG | + | chr4_2:47808963-47808982 | Msa0603320:intron | 20.0% |
!!! | TGAATCTGTTTTTATATTGA+GGG | + | chr4_2:47808964-47808983 | Msa0603320:intron | 20.0% |
!! | GAATTACTTGTTCATTAAAT+TGG | + | chr4_2:47809163-47809182 | Msa0603320:intron | 20.0% |
!! | GTTTAATGATCTATTTAATG+TGG | + | chr4_2:47809228-47809247 | Msa0603320:intron | 20.0% |
!!! | GCTTTATTATTTACTCATTT+TGG | + | chr4_2:47809515-47809534 | Msa0603320:intron | 20.0% |
!!! | CTTTTTTTTCTTTCTTTTGT+TGG | + | chr4_2:47809649-47809668 | Msa0603320:intron | 20.0% |
!! | TCAATATAGTACTTTACTTA+GGG | - | chr4_2:47810506-47810525 | None:intergenic | 20.0% |
!!! | ATTTTACATATGACTTTGTT+AGG | + | chr4_2:47810699-47810718 | Msa0603320:intron | 20.0% |
!!! | TTTTACATATGACTTTGTTA+GGG | + | chr4_2:47810700-47810719 | Msa0603320:intron | 20.0% |
!! | TTATTGCTTCATTACATTAT+GGG | + | chr4_2:47810730-47810749 | Msa0603320:intron | 20.0% |
!! | TGAATAGTGATACTAAATAT+TGG | - | chr4_2:47811239-47811258 | None:intergenic | 20.0% |
!! | AAAAACGAAGCAATGATTTT+GGG | - | chr4_2:47807676-47807695 | None:intergenic | 25.0% |
!! | AAAAAACGAAGCAATGATTT+TGG | - | chr4_2:47807677-47807696 | None:intergenic | 25.0% |
! | ATTTCTACCTTGTAAAGTTT+AGG | + | chr4_2:47807763-47807782 | Msa0603320:intron | 25.0% |
!!! | TTTTTTTCTTTTTTCCCTGT+TGG | + | chr4_2:47807789-47807808 | Msa0603320:intron | 25.0% |
! | ATAGACAACAAAAATCAATG+TGG | - | chr4_2:47808187-47808206 | None:intergenic | 25.0% |
! | ACTTCAATTGTTATGACTTA+CGG | + | chr4_2:47808413-47808432 | Msa0603320:intron | 25.0% |
!!! | CTTCTAATGAACTAGTTTTT+GGG | - | chr4_2:47808671-47808690 | None:intergenic | 25.0% |
! | TAAAATATTAGTGGTGTGTT+TGG | + | chr4_2:47808751-47808770 | Msa0603320:intron | 25.0% |
! | AAAATATTAGTGGTGTGTTT+GGG | + | chr4_2:47808752-47808771 | Msa0603320:intron | 25.0% |
! | TCATGCTAATTTATAAGTTG+CGG | + | chr4_2:47808989-47809008 | Msa0603320:intron | 25.0% |
! | TTCATTCATCTATCACTATT+TGG | + | chr4_2:47809332-47809351 | Msa0603320:intron | 25.0% |
! | TATACCTTAATACAGTCTAT+AGG | + | chr4_2:47809358-47809377 | Msa0603320:intron | 25.0% |
! | GTAAATAATAAAGCTCAATG+TGG | - | chr4_2:47809509-47809528 | None:intergenic | 25.0% |
! | AAATAAATGTACAAACTTCG+AGG | - | chr4_2:47809600-47809619 | None:intergenic | 25.0% |
!!! | TTTTAAAATTTGAGGCTTCA+TGG | + | chr4_2:47809700-47809719 | Msa0603320:intron | 25.0% |
!! | CAAAATTTACCACCATTTTA+AGG | - | chr4_2:47809760-47809779 | None:intergenic | 25.0% |
!!! | TTTTAAGGAGAACATCAATA+TGG | - | chr4_2:47809803-47809822 | None:intergenic | 25.0% |
! | CAAATTATCAACATGTCATA+AGG | + | chr4_2:47810402-47810421 | Msa0603320:intron | 25.0% |
! | CTCAATATAGTACTTTACTT+AGG | - | chr4_2:47810507-47810526 | None:intergenic | 25.0% |
! | GTTATTGCTTCATTACATTA+TGG | + | chr4_2:47810729-47810748 | Msa0603320:intron | 25.0% |
! | TATTGCTTCATTACATTATG+GGG | + | chr4_2:47810731-47810750 | Msa0603320:intron | 25.0% |
!!! | ACTTTTGCTATTTTAAAGTG+AGG | + | chr4_2:47811095-47811114 | Msa0603320:three_prime_UTR | 25.0% |
TGAGTTAGGGTTTATCTTTA+CGG | + | chr4_2:47807489-47807508 | Msa0603320:five_prime_UTR | 30.0% | |
!!! | TGATTTAGGGTTTTGAGATT+GGG | - | chr4_2:47807526-47807545 | None:intergenic | 30.0% |
TATAATCGTTCGATCCAAAA+TGG | + | chr4_2:47807551-47807570 | Msa0603320:exon | 30.0% | |
! | AATCATGCTTTTGTCCATTT+TGG | - | chr4_2:47807568-47807587 | None:intergenic | 30.0% |
TATGCTAATACAAACCAACA+GGG | - | chr4_2:47807806-47807825 | None:intergenic | 30.0% | |
TTATGCTAATACAAACCAAC+AGG | - | chr4_2:47807807-47807826 | None:intergenic | 30.0% | |
!!! | TGTCATGTTTTTTGGAGAAT+AGG | + | chr4_2:47808033-47808052 | Msa0603320:intron | 30.0% |
ATATGAGCCAATGTCTATAA+CGG | + | chr4_2:47808250-47808269 | Msa0603320:intron | 30.0% | |
! | ATTCATCGATCAGTATTTTG+TGG | + | chr4_2:47808310-47808329 | Msa0603320:intron | 30.0% |
TGTGAGTTAGGATACAAAAA+GGG | - | chr4_2:47808387-47808406 | None:intergenic | 30.0% | |
TTGTGAGTTAGGATACAAAA+AGG | - | chr4_2:47808388-47808407 | None:intergenic | 30.0% | |
! | TATGTTTAGATGGAAGGTTT+TGG | + | chr4_2:47808436-47808455 | Msa0603320:intron | 30.0% |
!!! | CCTTCTAATGAACTAGTTTT+TGG | - | chr4_2:47808672-47808691 | None:intergenic | 30.0% |
CCAAAAACTAGTTCATTAGA+AGG | + | chr4_2:47808669-47808688 | Msa0603320:intron | 30.0% | |
AAAACTCAATGTGGTACTTA+AGG | - | chr4_2:47808707-47808726 | None:intergenic | 30.0% | |
!!! | GTTAGTTTTTGTTCTTCTGT+TGG | + | chr4_2:47808922-47808941 | Msa0603320:intron | 30.0% |
CATGCTAATTTATAAGTTGC+GGG | + | chr4_2:47808990-47809009 | Msa0603320:intron | 30.0% | |
!! | TTTTAAGGAGAACGTAACTA+TGG | - | chr4_2:47809059-47809078 | None:intergenic | 30.0% |
AAAGTGGTAATTAAACCATG+AGG | - | chr4_2:47809194-47809213 | None:intergenic | 30.0% | |
ACGGATAAGAAAAATCAAAG+TGG | - | chr4_2:47809210-47809229 | None:intergenic | 30.0% | |
TCTACCTATAGACTGTATTA+AGG | - | chr4_2:47809365-47809384 | None:intergenic | 30.0% | |
! | ATAGTGTTTTCATTGAGAGT+TGG | - | chr4_2:47809400-47809419 | None:intergenic | 30.0% |
AGTTATGACTTAAGCCAATA+TGG | + | chr4_2:47809428-47809447 | Msa0603320:intron | 30.0% | |
!! | TTGGTTTGTATTAGCATTAC+AGG | + | chr4_2:47809668-47809687 | Msa0603320:intron | 30.0% |
! | TTTTGATGTCCTCCTTAAAA+TGG | + | chr4_2:47809745-47809764 | Msa0603320:intron | 30.0% |
!! | AATTTACCACCATTTTAAGG+AGG | - | chr4_2:47809757-47809776 | None:intergenic | 30.0% |
AGAAACATTCAAAAGTCACA+CGG | - | chr4_2:47809827-47809846 | None:intergenic | 30.0% | |
! | TGACTTTTGAATGTTTCTTC+TGG | + | chr4_2:47809829-47809848 | Msa0603320:intron | 30.0% |
TTGTGCTTTCATTAAGAGTT+AGG | - | chr4_2:47810141-47810160 | None:intergenic | 30.0% | |
TGAAGTTGTTTATCCAAACA+AGG | - | chr4_2:47810243-47810262 | None:intergenic | 30.0% | |
TTATTTCCATAAGTTGTCCA+GGG | - | chr4_2:47810365-47810384 | None:intergenic | 30.0% | |
CTTTCTTATCTACTCAATGT+GGG | + | chr4_2:47810527-47810546 | Msa0603320:intron | 30.0% | |
ATATTGGCAATCAAGAATGA+CGG | - | chr4_2:47811223-47811242 | None:intergenic | 30.0% | |
!!! | GTGATTTAGGGTTTTGAGAT+TGG | - | chr4_2:47807527-47807546 | None:intergenic | 35.0% |
CGATTATACGCAGTGATTTA+GGG | - | chr4_2:47807539-47807558 | None:intergenic | 35.0% | |
ACGATTATACGCAGTGATTT+AGG | - | chr4_2:47807540-47807559 | None:intergenic | 35.0% | |
! | CAAAAGCATGATTGCTGATA+TGG | + | chr4_2:47807575-47807594 | Msa0603320:CDS | 35.0% |
TGATATGGAAAATCTTCCAG+AGG | + | chr4_2:47807590-47807609 | Msa0603320:CDS | 35.0% | |
! | ATTCTTTGTTTATCAGCCTC+TGG | - | chr4_2:47807609-47807628 | None:intergenic | 35.0% |
AGAGGCTGATAAACAAAGAA+TGG | + | chr4_2:47807608-47807627 | Msa0603320:CDS | 35.0% | |
AATAAATGTACCCCCTTTGA+GGG | - | chr4_2:47807741-47807760 | None:intergenic | 35.0% | |
AAATAAATGTACCCCCTTTG+AGG | - | chr4_2:47807742-47807761 | None:intergenic | 35.0% | |
!! | TTTTAAGGAGAACATCACTC+TGG | - | chr4_2:47807927-47807946 | None:intergenic | 35.0% |
!!! | CAATAGTCACACTGGTTTTA+AGG | - | chr4_2:47807942-47807961 | None:intergenic | 35.0% |
! | TGACTATTGAATGTTGCTTC+TGG | + | chr4_2:47807953-47807972 | Msa0603320:intron | 35.0% |
!!! | CTTGTAGCTGTCATGTTTTT+TGG | + | chr4_2:47808025-47808044 | Msa0603320:intron | 35.0% |
! | ATGCTGTCTTTTAGTACCTT+TGG | + | chr4_2:47808071-47808090 | Msa0603320:intron | 35.0% |
! | TGCTGTCTTTTAGTACCTTT+GGG | + | chr4_2:47808072-47808091 | Msa0603320:intron | 35.0% |
CATCAAACTAACTAGTCCAT+GGG | - | chr4_2:47808149-47808168 | None:intergenic | 35.0% | |
!! | CATGGACTAGTTAGTTTGAT+GGG | + | chr4_2:47808148-47808167 | Msa0603320:intron | 35.0% |
!! | ATAGACATTGGCTCATATAG+AGG | - | chr4_2:47808248-47808267 | None:intergenic | 35.0% |
TGAAGTTATCGTTGTGAGTT+AGG | - | chr4_2:47808399-47808418 | None:intergenic | 35.0% | |
TGACTTACGGTATGTTTAGA+TGG | + | chr4_2:47808426-47808445 | Msa0603320:intron | 35.0% | |
TTACGGTATGTTTAGATGGA+AGG | + | chr4_2:47808430-47808449 | Msa0603320:intron | 35.0% | |
!!! | TTTAGATGGAAGGTTTTGGA+GGG | + | chr4_2:47808440-47808459 | Msa0603320:intron | 35.0% |
AATGTGGTACTTAAGGCATA+AGG | - | chr4_2:47808700-47808719 | None:intergenic | 35.0% | |
GTAGACAAGAAAACTCAATG+TGG | - | chr4_2:47808716-47808735 | None:intergenic | 35.0% | |
! | TTTTCTTGTCTACTCGATGT+TGG | + | chr4_2:47808723-47808742 | Msa0603320:intron | 35.0% |
! | GTTTGGGTTTCAGTTCAAAA+AGG | + | chr4_2:47808768-47808787 | Msa0603320:intron | 35.0% |
!!! | TGAAAGTCACACTGGTTTTA+AGG | - | chr4_2:47809074-47809093 | None:intergenic | 35.0% |
! | GTGACTTTCAATGTTGCTTA+TGG | + | chr4_2:47809084-47809103 | Msa0603320:intron | 35.0% |
!! | AATGTTGCTTATGGACGTTT+TGG | + | chr4_2:47809093-47809112 | Msa0603320:intron | 35.0% |
!! | ATGTTGCTTATGGACGTTTT+GGG | + | chr4_2:47809094-47809113 | Msa0603320:intron | 35.0% |
AGATGAATGAAGCCATGAAA+GGG | - | chr4_2:47809323-47809342 | None:intergenic | 35.0% | |
TAGATGAATGAAGCCATGAA+AGG | - | chr4_2:47809324-47809343 | None:intergenic | 35.0% | |
ACCTAATGAACAAGTCTCTA+GGG | - | chr4_2:47809463-47809482 | None:intergenic | 35.0% | |
! | TTTTCCACCGTGCAAATTTT+AGG | + | chr4_2:47809621-47809640 | Msa0603320:intron | 35.0% |
! | TTTCCACCGTGCAAATTTTA+GGG | + | chr4_2:47809622-47809641 | Msa0603320:intron | 35.0% |
AGTAACCCCTAAAATTTGCA+CGG | - | chr4_2:47809631-47809650 | None:intergenic | 35.0% | |
CTTCATGGTATGTAAGTTGT+TGG | + | chr4_2:47809715-47809734 | Msa0603320:intron | 35.0% | |
GAAACATTCAAAAGTCACAC+GGG | - | chr4_2:47809826-47809845 | None:intergenic | 35.0% | |
! | AATGTTTCTTCTGGACGTTT+TGG | + | chr4_2:47809838-47809857 | Msa0603320:intron | 35.0% |
! | ATGTTTCTTCTGGACGTTTT+GGG | + | chr4_2:47809839-47809858 | Msa0603320:intron | 35.0% |
! | GGAACTACATTTTCAACAAG+TGG | + | chr4_2:47809860-47809879 | Msa0603320:intron | 35.0% |
! | ACTACATTTTCAACAAGTGG+TGG | + | chr4_2:47809863-47809882 | Msa0603320:intron | 35.0% |
CATTAGACGAAGGCTTAATT+AGG | + | chr4_2:47809942-47809961 | Msa0603320:intron | 35.0% | |
TCGGCTCTTAAAGTCTTAAA+GGG | - | chr4_2:47810007-47810026 | None:intergenic | 35.0% | |
TTAAGAGCCGACATATACTA+CGG | + | chr4_2:47810016-47810035 | Msa0603320:intron | 35.0% | |
CTACAGAAAGGAATAGAATG+AGG | - | chr4_2:47810118-47810137 | None:intergenic | 35.0% | |
TTAAGAGTTAGGCTACAGAA+AGG | - | chr4_2:47810130-47810149 | None:intergenic | 35.0% | |
TTGTATTAGACTCTCCTTGT+GGG | - | chr4_2:47810180-47810199 | None:intergenic | 35.0% | |
TTTGTATTAGACTCTCCTTG+TGG | - | chr4_2:47810181-47810200 | None:intergenic | 35.0% | |
CTTATTTCCATAAGTTGTCC+AGG | - | chr4_2:47810366-47810385 | None:intergenic | 35.0% | |
! | TTATCCTTAGTTCTCCCAAA+CGG | + | chr4_2:47810427-47810446 | Msa0603320:intron | 35.0% |
TACTTTACTTAGGGTCTGTT+GGG | - | chr4_2:47810497-47810516 | None:intergenic | 35.0% | |
GCTTTCTTATCTACTCAATG+TGG | + | chr4_2:47810526-47810545 | Msa0603320:intron | 35.0% | |
CTCATGATAGATTAGTGGTA+TGG | + | chr4_2:47810551-47810570 | Msa0603320:intron | 35.0% | |
TATGACTTTGTTAGGGTGAT+TGG | + | chr4_2:47810707-47810726 | Msa0603320:intron | 35.0% | |
! | TTATGGGGCTCTTGTATTTT+TGG | + | chr4_2:47810746-47810765 | Msa0603320:intron | 35.0% |
TAGTTGACATATTACCAGAC+AGG | + | chr4_2:47810797-47810816 | Msa0603320:intron | 35.0% | |
AGTTGACATATTACCAGACA+GGG | + | chr4_2:47810798-47810817 | Msa0603320:intron | 35.0% | |
CCAGGTTATTATACATTCTC+AGG | - | chr4_2:47810855-47810874 | None:intergenic | 35.0% | |
CCTGAGAATGTATAATAACC+TGG | + | chr4_2:47810852-47810871 | Msa0603320:CDS | 35.0% | |
GAGAATGTATAATAACCTGG+TGG | + | chr4_2:47810855-47810874 | Msa0603320:CDS | 35.0% | |
TCTTCTTCCACACTTGAGTT+AGG | + | chr4_2:47807475-47807494 | Msa0603320:five_prime_UTR | 40.0% | |
CTTCTTCCACACTTGAGTTA+GGG | + | chr4_2:47807476-47807495 | Msa0603320:five_prime_UTR | 40.0% | |
GATAAACCCTAACTCAAGTG+TGG | - | chr4_2:47807485-47807504 | None:intergenic | 40.0% | |
ATAAATGTACCCCCTTTGAG+GGG | - | chr4_2:47807740-47807759 | None:intergenic | 40.0% | |
GCAACATTCAATAGTCACAC+TGG | - | chr4_2:47807950-47807969 | None:intergenic | 40.0% | |
!! | AATGTTGCTTCTGGACGTTT+TGG | + | chr4_2:47807962-47807981 | Msa0603320:intron | 40.0% |
!! | ATGTTGCTTCTGGACGTTTT+GGG | + | chr4_2:47807963-47807982 | Msa0603320:intron | 40.0% |
TACCTTTGGGCTCTGTTTAA+TGG | + | chr4_2:47808085-47808104 | Msa0603320:intron | 40.0% | |
TTCCATTAAACAGAGCCCAA+AGG | - | chr4_2:47808090-47808109 | None:intergenic | 40.0% | |
CCATCAAACTAACTAGTCCA+TGG | - | chr4_2:47808150-47808169 | None:intergenic | 40.0% | |
!! | CCATGGACTAGTTAGTTTGA+TGG | + | chr4_2:47808147-47808166 | Msa0603320:intron | 40.0% |
ACAAAAAGGGCTGCCTATAT+AGG | - | chr4_2:47808374-47808393 | None:intergenic | 40.0% | |
!! | GTTTAGATGGAAGGTTTTGG+AGG | + | chr4_2:47808439-47808458 | Msa0603320:intron | 40.0% |
!!! | TTAGATGGAAGGTTTTGGAG+GGG | + | chr4_2:47808441-47808460 | Msa0603320:intron | 40.0% |
!! | AGGAGGTTTTTGAAGGGTTT+GGG | - | chr4_2:47808617-47808636 | None:intergenic | 40.0% |
!! | TTCTGGAGGAGGTTTTTGAA+GGG | - | chr4_2:47808623-47808642 | None:intergenic | 40.0% |
!! | TTTCTGGAGGAGGTTTTTGA+AGG | - | chr4_2:47808624-47808643 | None:intergenic | 40.0% |
!!! | AACTAGTTTTTGGGTTCTCC+TGG | - | chr4_2:47808662-47808681 | None:intergenic | 40.0% |
! | CTACTAGTCTAGTGTGTGTT+TGG | - | chr4_2:47808828-47808847 | None:intergenic | 40.0% |
AGCAACATTGAAAGTCACAC+TGG | - | chr4_2:47809082-47809101 | None:intergenic | 40.0% | |
ATTAAATTGGGAGAGCCTCA+TGG | + | chr4_2:47809176-47809195 | Msa0603320:intron | 40.0% | |
AAGGGATAAAAGTGGGTGAA+AGG | - | chr4_2:47809298-47809317 | None:intergenic | 40.0% | |
AAGGGGAAAGGGATAAAAGT+GGG | - | chr4_2:47809305-47809324 | None:intergenic | 40.0% | |
AAAGGGGAAAGGGATAAAAG+TGG | - | chr4_2:47809306-47809325 | None:intergenic | 40.0% | |
TTTATCCCTTTCCCCTTTCA+TGG | + | chr4_2:47809308-47809327 | Msa0603320:intron | 40.0% | |
GATGAATGAAGCCATGAAAG+GGG | - | chr4_2:47809322-47809341 | None:intergenic | 40.0% | |
TAGGGTTAGACTCTCCATAT+TGG | - | chr4_2:47809445-47809464 | None:intergenic | 40.0% | |
! | ACCCTAGAGACTTGTTCATT+AGG | + | chr4_2:47809459-47809478 | Msa0603320:intron | 40.0% |
CACCTAATGAACAAGTCTCT+AGG | - | chr4_2:47809464-47809483 | None:intergenic | 40.0% | |
! | CTAGAGACTTGTTCATTAGG+TGG | + | chr4_2:47809462-47809481 | Msa0603320:intron | 40.0% |
! | TTCCACCGTGCAAATTTTAG+GGG | + | chr4_2:47809623-47809642 | Msa0603320:intron | 40.0% |
TGATGTCCTCCTTAAAATGG+TGG | + | chr4_2:47809748-47809767 | Msa0603320:intron | 40.0% | |
! | CAAAAGTCACACGGGTTTTA+AGG | - | chr4_2:47809818-47809837 | None:intergenic | 40.0% |
CTCACTAGTTCATTAGACGA+AGG | + | chr4_2:47809932-47809951 | Msa0603320:intron | 40.0% | |
! | GTCGGCTCTTAAAGTCTTAA+AGG | - | chr4_2:47810008-47810027 | None:intergenic | 40.0% |
GTGAAAGCCGTAGTATATGT+CGG | - | chr4_2:47810026-47810045 | None:intergenic | 40.0% | |
AAATGAGTGAACCTGCCAAA+GGG | - | chr4_2:47810069-47810088 | None:intergenic | 40.0% | |
CATCAAGTCTAAGAACCTCA+TGG | + | chr4_2:47810210-47810229 | Msa0603320:intron | 40.0% | |
AAACAAGGTCTTAAGCCATG+AGG | - | chr4_2:47810228-47810247 | None:intergenic | 40.0% | |
TCATGGCTTAAGACCTTGTT+TGG | + | chr4_2:47810227-47810246 | Msa0603320:intron | 40.0% | |
!! | GCTATTTTCATAAGTTGCCC+TGG | + | chr4_2:47810345-47810364 | Msa0603320:intron | 40.0% |
AAACACTTGTGAGACCGTTT+GGG | - | chr4_2:47810444-47810463 | None:intergenic | 40.0% | |
GTACTTTACTTAGGGTCTGT+TGG | - | chr4_2:47810498-47810517 | None:intergenic | 40.0% | |
TGGGTCTCATGATAGATTAG+TGG | + | chr4_2:47810546-47810565 | Msa0603320:intron | 40.0% | |
!! | ATAACGGACTAGAGTGTGTT+TGG | - | chr4_2:47810630-47810649 | None:intergenic | 40.0% |
CCAGAATGAAGAGTTACAGA+GGG | - | chr4_2:47810673-47810692 | None:intergenic | 40.0% | |
CAAAATCAGATAACCCTGTC+TGG | - | chr4_2:47810814-47810833 | None:intergenic | 40.0% | |
GAGATGCTTTCATGATTGTG+TGG | + | chr4_2:47810879-47810898 | Msa0603320:CDS | 40.0% | |
TAAATCCCTGCAAAAGCAAG+AGG | + | chr4_2:47810915-47810934 | Msa0603320:CDS | 40.0% | |
! | GATTTGGAGCTGATCGATCA+TGG | - | chr4_2:47807637-47807656 | None:intergenic | 45.0% |
ACTTATGTTACCCCCCTCAA+AGG | + | chr4_2:47807725-47807744 | Msa0603320:intron | 45.0% | |
CTTATGTTACCCCCCTCAAA+GGG | + | chr4_2:47807726-47807745 | Msa0603320:intron | 45.0% | |
TTATGTTACCCCCCTCAAAG+GGG | + | chr4_2:47807727-47807746 | Msa0603320:intron | 45.0% | |
! | TAAATGTACCCCCTTTGAGG+GGG | - | chr4_2:47807739-47807758 | None:intergenic | 45.0% |
!! | GACATTGGCTCATATAGAGG+TGG | - | chr4_2:47808245-47808264 | None:intergenic | 45.0% |
GGGAAAGCCGTTATAGACAT+TGG | - | chr4_2:47808260-47808279 | None:intergenic | 45.0% | |
ATGTCTATAACGGCTTTCCC+TGG | + | chr4_2:47808260-47808279 | Msa0603320:intron | 45.0% | |
TCGATGAATGAAGCCACCAA+CGG | - | chr4_2:47808299-47808318 | None:intergenic | 45.0% | |
ATGAAGGGCTGTCTATAGGT+TGG | - | chr4_2:47808347-47808366 | None:intergenic | 45.0% | |
GCCTATATAGGCTGGATGAA+GGG | - | chr4_2:47808362-47808381 | None:intergenic | 45.0% | |
TGCCTATATAGGCTGGATGA+AGG | - | chr4_2:47808363-47808382 | None:intergenic | 45.0% | |
!! | GGTTTTTGAAGGGTTTGGGA+TGG | - | chr4_2:47808613-47808632 | None:intergenic | 45.0% |
!! | GAGGAGGTTTTTGAAGGGTT+TGG | - | chr4_2:47808618-47808637 | None:intergenic | 45.0% |
!!! | TTAAGGGTGTTTTCTGGAGG+AGG | - | chr4_2:47808634-47808653 | None:intergenic | 45.0% |
!!! | AGCTTAAGGGTGTTTTCTGG+AGG | - | chr4_2:47808637-47808656 | None:intergenic | 45.0% |
!!! | GTGAGCTTAAGGGTGTTTTC+TGG | - | chr4_2:47808640-47808659 | None:intergenic | 45.0% |
AAAACACCCTTAAGCTCACC+AGG | + | chr4_2:47808641-47808660 | Msa0603320:intron | 45.0% | |
TGAAGCCATGAAAGGGGAAA+GGG | - | chr4_2:47809316-47809335 | None:intergenic | 45.0% | |
ATGAAGCCATGAAAGGGGAA+AGG | - | chr4_2:47809317-47809336 | None:intergenic | 45.0% | |
AATGTGGTACTCAAGTCGTG+AGG | - | chr4_2:47809493-47809512 | None:intergenic | 45.0% | |
AACTTCGAGGCGTAAATCTG+AGG | - | chr4_2:47809587-47809606 | None:intergenic | 45.0% | |
AACCCCTAAAATTTGCACGG+TGG | - | chr4_2:47809628-47809647 | None:intergenic | 45.0% | |
AATGAGTGAACCTGCCAAAG+GGG | - | chr4_2:47810068-47810087 | None:intergenic | 45.0% | |
CAAATGAGTGAACCTGCCAA+AGG | - | chr4_2:47810070-47810089 | None:intergenic | 45.0% | |
TGTTATGACTTGAGCCCACA+AGG | + | chr4_2:47810163-47810182 | Msa0603320:intron | 45.0% | |
AAGTTGCCCTGGACAACTTA+TGG | + | chr4_2:47810356-47810375 | Msa0603320:intron | 45.0% | |
GAAACACTTGTGAGACCGTT+TGG | - | chr4_2:47810445-47810464 | None:intergenic | 45.0% | |
CCCTCTGTAACTCTTCATTC+TGG | + | chr4_2:47810670-47810689 | Msa0603320:intron | 45.0% | |
GCCAGAATGAAGAGTTACAG+AGG | - | chr4_2:47810674-47810693 | None:intergenic | 45.0% | |
!! | GGTTTCCTCTTGCTTTTGCA+GGG | - | chr4_2:47810923-47810942 | None:intergenic | 45.0% |
!! | AGGTTTCCTCTTGCTTTTGC+AGG | - | chr4_2:47810924-47810943 | None:intergenic | 45.0% |
! | AATCTTGAGTTGCAGCTCCT+TGG | - | chr4_2:47811017-47811036 | None:intergenic | 45.0% |
ATCAGCTCCAAATCCGTGAC+AGG | + | chr4_2:47807643-47807662 | Msa0603320:CDS | 50.0% | |
AACCTCACCTGTCACGGATT+TGG | - | chr4_2:47807653-47807672 | None:intergenic | 50.0% | |
TTTGGGAACCTCACCTGTCA+CGG | - | chr4_2:47807659-47807678 | None:intergenic | 50.0% | |
TATGTTACCCCCCTCAAAGG+GGG | + | chr4_2:47807728-47807747 | Msa0603320:intron | 50.0% | |
! | AAATGTACCCCCTTTGAGGG+GGG | - | chr4_2:47807738-47807757 | None:intergenic | 50.0% |
ATGAAGCCACCAACGGGAAA+GGG | - | chr4_2:47808292-47808311 | None:intergenic | 50.0% | |
AATGAAGCCACCAACGGGAA+AGG | - | chr4_2:47808293-47808312 | None:intergenic | 50.0% | |
CGATGAATGAAGCCACCAAC+GGG | - | chr4_2:47808298-47808317 | None:intergenic | 50.0% | |
CTGGATGAAGGGCTGTCTAT+AGG | - | chr4_2:47808351-47808370 | None:intergenic | 50.0% | |
GCCCTTCATCCAGCCTATAT+AGG | + | chr4_2:47808358-47808377 | Msa0603320:intron | 50.0% | |
AAAGGGCTGCCTATATAGGC+TGG | - | chr4_2:47808370-47808389 | None:intergenic | 50.0% | |
GGTTCTCCTGGTGAGCTTAA+GGG | - | chr4_2:47808650-47808669 | None:intergenic | 50.0% | |
ATACTACGGCTTTCACCTGC+TGG | + | chr4_2:47810030-47810049 | Msa0603320:intron | 50.0% | |
GGTGGTATTCCTTTCCCCTT+TGG | + | chr4_2:47810051-47810070 | Msa0603320:intron | 50.0% | |
GTATTCCTTTCCCCTTTGGC+AGG | + | chr4_2:47810055-47810074 | Msa0603320:intron | 50.0% | |
GAGACCGTTTGGGAGAACTA+AGG | - | chr4_2:47810434-47810453 | None:intergenic | 50.0% | |
!! | CATGAAAGCATCTCTCCACC+AGG | - | chr4_2:47810873-47810892 | None:intergenic | 50.0% |
CTCTGCACATCTTCGAACAC+AGG | - | chr4_2:47810944-47810963 | None:intergenic | 50.0% | |
! | CTGAAGCACTCTATGCGTGT+TGG | + | chr4_2:47810970-47810989 | Msa0603320:CDS | 50.0% |
! | ACTCTATGCGTGTTGGCATG+AGG | + | chr4_2:47810977-47810996 | Msa0603320:CDS | 50.0% |
!! | AGGTTTGCTGAGCTCAACCA+AGG | + | chr4_2:47810997-47811016 | Msa0603320:CDS | 50.0% |
GGAGCTGCAACTCAAGATTG+AGG | + | chr4_2:47811018-47811037 | Msa0603320:CDS | 50.0% | |
CTCCAAATCCGTGACAGGTG+AGG | + | chr4_2:47807648-47807667 | Msa0603320:intron | 55.0% | |
ACTAGTCCATGGGCTCGACT+CGG | - | chr4_2:47808139-47808158 | None:intergenic | 55.0% | |
ACGGGAAAGGGATAACGCCA+GGG | - | chr4_2:47808280-47808299 | None:intergenic | 55.0% | |
AACGGGAAAGGGATAACGCC+AGG | - | chr4_2:47808281-47808300 | None:intergenic | 55.0% | |
TGGCGTTATCCCTTTCCCGT+TGG | + | chr4_2:47808280-47808299 | Msa0603320:intron | 55.0% | |
CGTTATCCCTTTCCCGTTGG+TGG | + | chr4_2:47808283-47808302 | Msa0603320:intron | 55.0% | |
!!! | GATGGAAGGTTTTGGAGGGG+AGG | + | chr4_2:47808444-47808463 | Msa0603320:intron | 55.0% |
GGGTTCTCCTGGTGAGCTTA+AGG | - | chr4_2:47808651-47808670 | None:intergenic | 55.0% | |
GGGAAAGGAATACCACCAGC+AGG | - | chr4_2:47810048-47810067 | None:intergenic | 55.0% | |
GTGAACCTGCCAAAGGGGAA+AGG | - | chr4_2:47810063-47810082 | None:intergenic | 55.0% | |
GTTATGCCGAGTCGAGCCCA+TGG | + | chr4_2:47808130-47808149 | Msa0603320:intron | 60.0% | |
CTACGGCTTTCACCTGCTGG+TGG | + | chr4_2:47810033-47810052 | Msa0603320:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 47807449 | 47811264 | 47807449 | ID=Msa0603320;Name=Msa0603320 |
chr4_2 | mRNA | 47807449 | 47811264 | 47807449 | ID=Msa0603320-mRNA-1;Parent=Msa0603320;Name=Msa0603320-mRNA-1;_AED=0.00;_eAED=0.00;_QI=121|1|1|1|1|1|2|226|93 |
chr4_2 | exon | 47807449 | 47807664 | 47807449 | ID=Msa0603320-mRNA-1:exon:10924;Parent=Msa0603320-mRNA-1 |
chr4_2 | exon | 47810852 | 47811264 | 47810852 | ID=Msa0603320-mRNA-1:exon:10925;Parent=Msa0603320-mRNA-1 |
chr4_2 | five_prime_UTR | 47807449 | 47807569 | 47807449 | ID=Msa0603320-mRNA-1:five_prime_utr;Parent=Msa0603320-mRNA-1 |
chr4_2 | CDS | 47807570 | 47807664 | 47807570 | ID=Msa0603320-mRNA-1:cds;Parent=Msa0603320-mRNA-1 |
chr4_2 | CDS | 47810852 | 47811038 | 47810852 | ID=Msa0603320-mRNA-1:cds;Parent=Msa0603320-mRNA-1 |
chr4_2 | three_prime_UTR | 47811039 | 47811264 | 47811039 | ID=Msa0603320-mRNA-1:three_prime_utr;Parent=Msa0603320-mRNA-1 |
Gene Sequence |
Protein sequence |