Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005013.t1 | XP_003590872.2 | 94.7 | 265 | 14 | 0 | 1 | 265 | 1 | 265 | 2.10E-142 | 515.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005013.t1 | Q949S5 | 47.3 | 262 | 124 | 7 | 7 | 264 | 4 | 255 | 1.5e-56 | 221.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005013.t1 | G7I5K2 | 94.7 | 265 | 14 | 0 | 1 | 265 | 1 | 265 | 1.5e-142 | 515.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005013.t1 | MTR_1g079180 | 94.717 | 265 | 14 | 0 | 1 | 265 | 1 | 265 | 0.0 | 522 |
MS.gene005013.t1 | MTR_1g079180 | 51.807 | 166 | 50 | 4 | 283 | 448 | 130 | 265 | 9.11e-43 | 152 |
MS.gene005013.t1 | MTR_1g079200 | 81.852 | 270 | 38 | 5 | 1 | 265 | 1 | 264 | 9.93e-150 | 426 |
MS.gene005013.t1 | MTR_1g079200 | 50.000 | 168 | 53 | 2 | 283 | 448 | 126 | 264 | 1.82e-40 | 145 |
MS.gene005013.t1 | MTR_1g079370 | 76.493 | 268 | 57 | 3 | 1 | 265 | 1 | 265 | 8.15e-146 | 417 |
MS.gene005013.t1 | MTR_1g079370 | 52.381 | 168 | 49 | 2 | 283 | 448 | 127 | 265 | 1.01e-45 | 160 |
MS.gene005013.t1 | MTR_1g079460 | 74.721 | 269 | 63 | 3 | 1 | 266 | 1 | 267 | 2.93e-137 | 395 |
MS.gene005013.t1 | MTR_1g079460 | 52.071 | 169 | 52 | 1 | 283 | 451 | 130 | 269 | 1.10e-46 | 162 |
MS.gene005013.t1 | MTR_1g100597 | 74.638 | 276 | 55 | 6 | 1 | 265 | 1 | 272 | 3.33e-137 | 395 |
MS.gene005013.t1 | MTR_1g100597 | 57.988 | 169 | 51 | 4 | 283 | 451 | 127 | 275 | 2.02e-50 | 172 |
MS.gene005013.t1 | MTR_1g079380 | 75.373 | 268 | 60 | 3 | 1 | 265 | 1 | 265 | 1.21e-131 | 382 |
MS.gene005013.t1 | MTR_1g079380 | 52.381 | 168 | 49 | 2 | 283 | 448 | 127 | 265 | 3.00e-46 | 162 |
MS.gene005013.t1 | MTR_1g079260 | 69.928 | 276 | 70 | 5 | 1 | 266 | 1 | 273 | 1.03e-128 | 374 |
MS.gene005013.t1 | MTR_1g079260 | 51.190 | 168 | 60 | 2 | 283 | 449 | 127 | 273 | 1.07e-45 | 160 |
MS.gene005013.t1 | MTR_1g079850 | 67.730 | 282 | 75 | 4 | 1 | 266 | 1 | 282 | 2.03e-123 | 360 |
MS.gene005013.t1 | MTR_1g079850 | 48.824 | 170 | 70 | 2 | 283 | 451 | 131 | 284 | 1.56e-38 | 141 |
MS.gene005013.t1 | MTR_1g079230 | 66.786 | 280 | 71 | 5 | 1 | 265 | 1 | 273 | 1.60e-120 | 353 |
MS.gene005013.t1 | MTR_1g079230 | 48.824 | 170 | 66 | 3 | 283 | 451 | 127 | 276 | 1.67e-39 | 144 |
MS.gene005013.t1 | MTR_1g100613 | 70.902 | 244 | 56 | 3 | 20 | 251 | 5 | 245 | 3.53e-116 | 340 |
MS.gene005013.t1 | MTR_1g100613 | 53.020 | 149 | 52 | 3 | 283 | 430 | 112 | 243 | 2.46e-38 | 139 |
MS.gene005013.t1 | MTR_1g079250 | 63.973 | 297 | 93 | 6 | 1 | 283 | 1 | 297 | 3.89e-115 | 340 |
MS.gene005013.t1 | MTR_1g079250 | 45.087 | 173 | 70 | 4 | 283 | 451 | 130 | 281 | 8.71e-32 | 123 |
MS.gene005013.t1 | MTR_1g026510 | 62.676 | 284 | 88 | 6 | 1 | 266 | 1 | 284 | 3.91e-112 | 332 |
MS.gene005013.t1 | MTR_1g026510 | 43.931 | 173 | 72 | 4 | 283 | 451 | 135 | 286 | 1.92e-31 | 122 |
MS.gene005013.t1 | MTR_3g006850 | 61.000 | 300 | 80 | 5 | 4 | 266 | 17 | 316 | 4.03e-108 | 323 |
MS.gene005013.t1 | MTR_3g006850 | 56.725 | 171 | 67 | 4 | 283 | 451 | 153 | 318 | 2.86e-53 | 181 |
MS.gene005013.t1 | MTR_3g452600 | 62.642 | 265 | 89 | 5 | 4 | 265 | 10 | 267 | 7.35e-101 | 302 |
MS.gene005013.t1 | MTR_3g452600 | 50.888 | 169 | 54 | 1 | 283 | 451 | 131 | 270 | 4.88e-44 | 155 |
MS.gene005013.t1 | MTR_1g079350 | 59.058 | 276 | 101 | 6 | 1 | 265 | 1 | 275 | 7.29e-95 | 287 |
MS.gene005013.t1 | MTR_1g079350 | 39.286 | 168 | 76 | 4 | 283 | 448 | 132 | 275 | 4.82e-25 | 104 |
MS.gene005013.t1 | MTR_1g078470 | 80.702 | 171 | 29 | 3 | 96 | 265 | 17 | 184 | 1.39e-93 | 280 |
MS.gene005013.t1 | MTR_1g078470 | 48.193 | 166 | 54 | 3 | 283 | 448 | 51 | 184 | 1.38e-39 | 141 |
MS.gene005013.t1 | MTR_3g450990 | 56.184 | 283 | 94 | 7 | 4 | 265 | 10 | 283 | 1.85e-90 | 276 |
MS.gene005013.t1 | MTR_3g450990 | 47.429 | 175 | 63 | 1 | 277 | 451 | 141 | 286 | 3.87e-42 | 151 |
MS.gene005013.t1 | MTR_2g079100 | 58.712 | 264 | 93 | 4 | 4 | 262 | 9 | 261 | 6.65e-90 | 274 |
MS.gene005013.t1 | MTR_2g079100 | 45.455 | 165 | 59 | 2 | 283 | 445 | 126 | 261 | 1.18e-33 | 127 |
MS.gene005013.t1 | MTR_1g079410 | 54.579 | 273 | 112 | 6 | 2 | 266 | 6 | 274 | 1.75e-87 | 268 |
MS.gene005013.t1 | MTR_1g079410 | 42.690 | 171 | 65 | 4 | 281 | 449 | 135 | 274 | 6.63e-30 | 117 |
MS.gene005013.t1 | MTR_1g079340 | 54.296 | 291 | 102 | 8 | 1 | 265 | 40 | 325 | 2.75e-85 | 265 |
MS.gene005013.t1 | MTR_1g079340 | 35.673 | 171 | 83 | 3 | 283 | 448 | 177 | 325 | 7.00e-20 | 90.5 |
MS.gene005013.t1 | MTR_7g096300 | 59.449 | 254 | 90 | 6 | 1 | 250 | 1 | 245 | 1.40e-80 | 264 |
MS.gene005013.t1 | MTR_7g096300 | 43.558 | 163 | 63 | 1 | 283 | 445 | 126 | 259 | 4.69e-28 | 117 |
MS.gene005013.t1 | MTR_1g079140 | 46.602 | 309 | 120 | 9 | 2 | 274 | 11 | 310 | 3.19e-76 | 241 |
MS.gene005013.t1 | MTR_1g079140 | 34.884 | 172 | 107 | 3 | 283 | 451 | 140 | 309 | 2.46e-23 | 100 |
MS.gene005013.t1 | MTR_1g079240 | 68.539 | 178 | 48 | 2 | 88 | 265 | 10 | 179 | 1.01e-75 | 234 |
MS.gene005013.t1 | MTR_1g079240 | 40.120 | 167 | 62 | 3 | 282 | 448 | 51 | 179 | 1.10e-25 | 103 |
MS.gene005013.t1 | MTR_1g079400 | 47.368 | 285 | 108 | 6 | 5 | 265 | 13 | 279 | 3.98e-69 | 221 |
MS.gene005013.t1 | MTR_1g079400 | 34.911 | 169 | 81 | 4 | 281 | 448 | 139 | 279 | 2.05e-17 | 82.8 |
MS.gene005013.t1 | MTR_7g112550 | 45.357 | 280 | 136 | 6 | 2 | 265 | 5 | 283 | 1.04e-65 | 213 |
MS.gene005013.t1 | MTR_7g112550 | 33.929 | 168 | 93 | 5 | 283 | 448 | 132 | 283 | 4.84e-16 | 78.6 |
MS.gene005013.t1 | MTR_1g083580 | 39.928 | 278 | 151 | 5 | 2 | 265 | 6 | 281 | 7.65e-57 | 189 |
MS.gene005013.t1 | MTR_1g083580 | 31.395 | 172 | 88 | 7 | 283 | 448 | 134 | 281 | 2.57e-11 | 64.7 |
MS.gene005013.t1 | MTR_1g079350 | 65.414 | 133 | 44 | 1 | 1 | 131 | 1 | 133 | 1.23e-47 | 163 |
MS.gene005013.t1 | MTR_7g112560 | 37.956 | 274 | 149 | 9 | 4 | 269 | 1 | 261 | 3.39e-47 | 163 |
MS.gene005013.t1 | MTR_7g112560 | 28.743 | 167 | 85 | 4 | 283 | 448 | 124 | 257 | 2.70e-12 | 67.4 |
MS.gene005013.t1 | MTR_1g076870 | 56.291 | 151 | 41 | 3 | 285 | 428 | 3 | 135 | 4.17e-46 | 156 |
MS.gene005013.t1 | MTR_1g076870 | 61.940 | 134 | 34 | 2 | 131 | 247 | 2 | 135 | 1.58e-45 | 155 |
MS.gene005013.t1 | MTR_4g023570 | 36.567 | 268 | 137 | 7 | 4 | 267 | 1 | 239 | 4.17e-42 | 149 |
MS.gene005013.t1 | MTR_2g042540 | 67.227 | 119 | 35 | 3 | 1 | 118 | 1 | 116 | 1.55e-40 | 141 |
MS.gene005013.t1 | MTR_1g079210 | 59.504 | 121 | 37 | 1 | 132 | 240 | 7 | 127 | 1.41e-38 | 137 |
MS.gene005013.t1 | MTR_1g079210 | 44.366 | 142 | 56 | 3 | 285 | 422 | 7 | 129 | 2.63e-25 | 101 |
MS.gene005013.t1 | MTR_7g096310 | 59.848 | 132 | 45 | 3 | 60 | 189 | 38 | 163 | 4.49e-38 | 136 |
MS.gene005013.t1 | MTR_1g079130 | 43.386 | 189 | 80 | 5 | 104 | 265 | 1 | 189 | 1.83e-37 | 135 |
MS.gene005013.t1 | MTR_1g079130 | 35.088 | 171 | 104 | 3 | 283 | 451 | 27 | 192 | 2.39e-21 | 91.7 |
MS.gene005013.t1 | MTR_1g078460 | 72.222 | 90 | 22 | 1 | 1 | 90 | 64 | 150 | 1.99e-32 | 120 |
MS.gene005013.t1 | MTR_3g058640 | 57.843 | 102 | 41 | 1 | 131 | 232 | 7 | 106 | 7.12e-31 | 115 |
MS.gene005013.t1 | MTR_3g058640 | 44.531 | 128 | 42 | 1 | 285 | 412 | 8 | 106 | 2.23e-24 | 97.4 |
MS.gene005013.t1 | MTR_1g079220 | 76.471 | 68 | 14 | 1 | 168 | 235 | 1 | 66 | 4.11e-27 | 103 |
MS.gene005013.t1 | MTR_1g079220 | 47.368 | 95 | 21 | 1 | 321 | 415 | 1 | 66 | 1.04e-17 | 77.8 |
MS.gene005013.t1 | MTR_7g103380 | 25.540 | 278 | 179 | 7 | 6 | 267 | 21 | 286 | 2.94e-26 | 108 |
MS.gene005013.t1 | MTR_0113s0040 | 27.305 | 282 | 166 | 5 | 2 | 267 | 20 | 278 | 8.44e-26 | 106 |
MS.gene005013.t1 | MTR_4g102770 | 27.574 | 272 | 177 | 6 | 6 | 270 | 21 | 279 | 2.69e-21 | 94.0 |
MS.gene005013.t1 | MTR_4g083970 | 30.806 | 211 | 117 | 7 | 66 | 267 | 102 | 292 | 1.30e-20 | 92.0 |
MS.gene005013.t1 | MTR_0002s0020 | 27.347 | 245 | 158 | 6 | 6 | 243 | 24 | 255 | 2.63e-20 | 91.3 |
MS.gene005013.t1 | MTR_1g101390 | 25.532 | 282 | 171 | 6 | 2 | 267 | 26 | 284 | 3.22e-20 | 90.9 |
MS.gene005013.t1 | MTR_5g010800 | 27.007 | 274 | 173 | 8 | 6 | 269 | 19 | 275 | 7.70e-20 | 89.7 |
MS.gene005013.t1 | MTR_1g079190 | 80.488 | 41 | 8 | 0 | 400 | 440 | 134 | 174 | 2.68e-15 | 74.3 |
MS.gene005013.t1 | MTR_1g079390 | 72.917 | 48 | 12 | 1 | 214 | 260 | 8 | 55 | 1.69e-14 | 68.2 |
MS.gene005013.t1 | MTR_1g050352 | 51.807 | 83 | 32 | 4 | 26 | 105 | 46 | 123 | 9.38e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005013.t1 | AT1G80110 | 47.328 | 262 | 124 | 7 | 7 | 264 | 4 | 255 | 8.68e-69 | 219 |
MS.gene005013.t1 | AT2G02360 | 44.569 | 267 | 130 | 7 | 4 | 264 | 14 | 268 | 2.99e-68 | 219 |
MS.gene005013.t1 | AT2G02360 | 32.727 | 165 | 75 | 4 | 286 | 447 | 137 | 268 | 5.23e-17 | 81.3 |
MS.gene005013.t1 | AT2G02240 | 43.019 | 265 | 138 | 6 | 4 | 264 | 61 | 316 | 1.26e-62 | 206 |
MS.gene005013.t1 | AT2G02340 | 41.758 | 273 | 146 | 6 | 1 | 264 | 33 | 301 | 2.90e-62 | 204 |
MS.gene005013.t1 | AT2G02250 | 42.264 | 265 | 141 | 6 | 4 | 264 | 47 | 303 | 1.88e-60 | 200 |
MS.gene005013.t1 | AT2G02230 | 36.774 | 310 | 144 | 9 | 2 | 265 | 30 | 333 | 1.44e-56 | 191 |
MS.gene005013.t1 | AT2G02230 | 28.646 | 192 | 104 | 7 | 283 | 451 | 155 | 336 | 3.97e-13 | 70.9 |
MS.gene005013.t1 | AT1G09155 | 40.559 | 286 | 135 | 10 | 7 | 265 | 3 | 280 | 7.30e-51 | 174 |
MS.gene005013.t1 | AT1G09155 | 34.104 | 173 | 92 | 5 | 283 | 448 | 123 | 280 | 2.77e-16 | 79.7 |
MS.gene005013.t1 | AT1G56250 | 41.489 | 282 | 138 | 9 | 7 | 265 | 4 | 281 | 2.51e-49 | 170 |
MS.gene005013.t1 | AT1G56250 | 31.765 | 170 | 100 | 4 | 283 | 448 | 124 | 281 | 2.72e-16 | 79.3 |
MS.gene005013.t1 | AT2G02350 | 38.889 | 270 | 149 | 8 | 2 | 264 | 22 | 282 | 8.42e-49 | 169 |
MS.gene005013.t1 | AT2G02350 | 30.233 | 172 | 87 | 4 | 279 | 447 | 141 | 282 | 1.64e-13 | 71.2 |
MS.gene005013.t1 | AT1G56240 | 40.925 | 281 | 139 | 10 | 7 | 264 | 4 | 280 | 8.71e-49 | 168 |
MS.gene005013.t1 | AT1G56240 | 32.544 | 169 | 98 | 4 | 283 | 447 | 124 | 280 | 4.34e-17 | 81.6 |
MS.gene005013.t1 | AT2G02320 | 39.405 | 269 | 141 | 9 | 6 | 264 | 42 | 298 | 1.19e-48 | 169 |
MS.gene005013.t1 | AT2G02320 | 29.940 | 167 | 87 | 3 | 287 | 450 | 162 | 301 | 1.24e-13 | 72.0 |
MS.gene005013.t1 | AT2G02310 | 36.431 | 269 | 157 | 6 | 4 | 266 | 45 | 305 | 2.00e-46 | 163 |
MS.gene005013.t1 | AT2G02300 | 38.095 | 273 | 135 | 7 | 4 | 266 | 34 | 282 | 5.00e-45 | 159 |
MS.gene005013.t1 | AT5G24560 | 40.306 | 196 | 99 | 5 | 4 | 195 | 3 | 184 | 2.71e-36 | 132 |
MS.gene005013.t1 | AT3G53000 | 29.091 | 275 | 166 | 8 | 6 | 264 | 23 | 284 | 2.66e-29 | 116 |
MS.gene005013.t1 | AT2G02350 | 37.500 | 168 | 95 | 6 | 104 | 264 | 1 | 165 | 3.20e-23 | 96.7 |
MS.gene005013.t1 | AT2G02350 | 31.098 | 164 | 80 | 4 | 287 | 447 | 32 | 165 | 1.62e-14 | 72.0 |
MS.gene005013.t1 | AT3G61060 | 25.185 | 270 | 178 | 7 | 6 | 266 | 27 | 281 | 3.32e-20 | 90.9 |
MS.gene005013.t1 | AT3G61060 | 24.444 | 270 | 181 | 6 | 6 | 266 | 27 | 282 | 1.20e-19 | 89.4 |
MS.gene005013.t1 | AT5G52120 | 27.698 | 278 | 172 | 8 | 4 | 267 | 21 | 283 | 4.03e-19 | 87.8 |
MS.gene005013.t1 | AT1G63090 | 29.126 | 206 | 124 | 7 | 6 | 195 | 28 | 227 | 2.87e-17 | 82.4 |
MS.gene005013.t1 | AT1G12710 | 27.500 | 200 | 128 | 4 | 6 | 192 | 30 | 225 | 2.04e-16 | 80.1 |
MS.gene005013.t1 | AT1G33920 | 29.545 | 176 | 95 | 6 | 99 | 265 | 9 | 164 | 1.50e-15 | 74.7 |
MS.gene005013.t1 | AT4G19850 | 30.168 | 179 | 96 | 7 | 97 | 265 | 17 | 176 | 7.56e-15 | 72.8 |
MS.gene005013.t1 | AT4G19850 | 30.168 | 179 | 96 | 7 | 97 | 265 | 59 | 218 | 8.43e-15 | 73.9 |
MS.gene005013.t1 | AT4G19840 | 28.070 | 171 | 99 | 5 | 102 | 266 | 94 | 246 | 1.27e-13 | 70.9 |
MS.gene005013.t1 | AT1G12710 | 28.931 | 159 | 108 | 3 | 6 | 163 | 30 | 184 | 6.18e-11 | 63.9 |
Find 117 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAAGCCGCATACTGGGTATT+TGG | 0.221796 | 1.3:+56226402 | None:intergenic |
ATTGGGGAGTTTGTCAATTC+AGG | 0.287046 | 1.3:-56226183 | MS.gene005013:CDS |
TCAAGAAGCTCAGCAACTTC+AGG | 0.299490 | 1.3:+56226474 | None:intergenic |
GCATTGCAATCCTGCTATAT+TGG | 0.301544 | 1.3:+56224965 | None:intergenic |
CAGGCACGTACTCAAATCTT+TGG | 0.310929 | 1.3:+56225159 | None:intergenic |
TTTGAACTTCTTCATCTTCA+AGG | 0.311584 | 1.3:+56224883 | None:intergenic |
AAGCCGCATACTGGGTATTT+GGG | 0.311807 | 1.3:+56226403 | None:intergenic |
TCATCTGGACTTCATCTTCT+AGG | 0.322582 | 1.3:+56226160 | None:intergenic |
CTGCCGATTCCGACGCCGTC+TGG | 0.326987 | 1.3:-56228883 | MS.gene005013:CDS |
TGATCATTGTCGATGATGAT+AGG | 0.340168 | 1.3:+56228749 | None:intergenic |
GGTGGTTGGAGATCGAGATT+GGG | 0.349116 | 1.3:-56226200 | MS.gene005013:CDS |
TAGATCTCTCTCCATTGCTT+GGG | 0.357129 | 1.3:-56228528 | MS.gene005013:CDS |
GACAGAGTTTGAGGAATTAT+CGG | 0.357846 | 1.3:-56228990 | MS.gene005013:CDS |
TTGTCTCCTTAACAGTCATC+TGG | 0.369915 | 1.3:+56226145 | None:intergenic |
TGCGGCCTATGTTCCACATT+TGG | 0.370602 | 1.3:+56225077 | None:intergenic |
GGATTTCTATGCCTAATTCC+AGG | 0.380639 | 1.3:-56228481 | MS.gene005013:intron |
ACACAAGATAAGCCGCATAC+TGG | 0.382857 | 1.3:+56226394 | None:intergenic |
GGGTGGTTGGAGATTGAAAT+GGG | 0.384436 | 1.3:-56224924 | MS.gene005013:CDS |
ATACCTTCCACTTCAACATT+TGG | 0.391514 | 1.3:+56226273 | None:intergenic |
CTAGATCTCTCTCCATTGCT+TGG | 0.397153 | 1.3:-56228529 | MS.gene005013:CDS |
TTCTTGAAGGAATAGAAGTT+AGG | 0.408541 | 1.3:-56224815 | MS.gene005013:CDS |
TTCTTGAAGGAATAGAAGTT+AGG | 0.408541 | 1.3:-56226101 | MS.gene005013:CDS |
CAGCTCTAAATCTATCTGTT+TGG | 0.409942 | 1.3:-56225102 | MS.gene005013:CDS |
CAACAAAGCTTAGCAACTTC+AGG | 0.414720 | 1.3:+56225278 | None:intergenic |
ATCTAAGCTAACCTGGAATT+AGG | 0.417358 | 1.3:+56228470 | None:intergenic |
TGAAATGCAGAGCTTTCAAT+TGG | 0.419927 | 1.3:-56228588 | MS.gene005013:intron |
AGTACTACTGTGGCCACCTT+CGG | 0.420003 | 1.3:+56226314 | None:intergenic |
ATGATAGACGCTATTGGAAC+TGG | 0.420013 | 1.3:-56228502 | MS.gene005013:CDS |
AAGAGAGGTCTCTTTCTTGA+AGG | 0.431285 | 1.3:-56226114 | MS.gene005013:CDS |
CTGTTAAGGAGACAAATAAT+TGG | 0.433929 | 1.3:-56226137 | MS.gene005013:CDS |
TAGTACTAAAATTGTCTGTT+TGG | 0.439372 | 1.3:-56226298 | MS.gene005013:CDS |
GGGTGGTTGGAGATCGAGAT+TGG | 0.440537 | 1.3:-56226201 | MS.gene005013:CDS |
GCACCAACTGATAACTCTAT+AGG | 0.442404 | 1.3:+56226336 | None:intergenic |
CTTCTTGAAGTGTGGTGGCT+TGG | 0.449338 | 1.3:-56226459 | MS.gene005013:CDS |
ATTCCAGACGGCGTCGGAAT+CGG | 0.451722 | 1.3:+56228880 | None:intergenic |
CGGAGTTGTGCGAGAGAGAA+TGG | 0.455681 | 1.3:+56228952 | None:intergenic |
TAGGACAGTTCTGAAATCCT+TGG | 0.473464 | 1.3:+56226355 | None:intergenic |
CTGAGCTTCTTGAAGTGTGG+TGG | 0.474820 | 1.3:-56226464 | MS.gene005013:CDS |
TGAAGTCCAGATGACTGTTA+AGG | 0.476166 | 1.3:-56226151 | MS.gene005013:CDS |
ATGGCCACCTTCAACATTAA+CGG | 0.477577 | 1.3:+56225127 | None:intergenic |
CAAGAAGCTCAGCAACTTCA+GGG | 0.478254 | 1.3:+56226475 | None:intergenic |
GAGAGTCTGCCGGCGTCAGC+CGG | 0.480678 | 1.3:+56228932 | None:intergenic |
TGGGTGGTTGGAGATTGAAA+TGG | 0.480917 | 1.3:-56224925 | MS.gene005013:CDS |
AGGCACGTACTCAAATCTTT+GGG | 0.483152 | 1.3:+56225160 | None:intergenic |
CGTCCTAGTGTGAGAAGCGA+TGG | 0.485861 | 1.3:-56226222 | MS.gene005013:CDS |
GCACATTGGTTTGAAATATG+TGG | 0.497104 | 1.3:-56225254 | MS.gene005013:CDS |
GTGTGGTGGCTTGGTATTCG+TGG | 0.500560 | 1.3:-56226450 | MS.gene005013:CDS |
AGATAGATTTAGAGCTGCTA+TGG | 0.503083 | 1.3:+56225108 | None:intergenic |
ATGAGAGGAGCTCGTATGCC+AGG | 0.503430 | 1.3:-56225028 | MS.gene005013:CDS |
AGGACAGTTCTGAAATCCTT+GGG | 0.504063 | 1.3:+56226356 | None:intergenic |
TGCCCTTGTGTGAGAAGTGA+TGG | 0.504326 | 1.3:-56224945 | MS.gene005013:CDS |
AAAGTATATTGCAAAAGTCT+TGG | 0.510831 | 1.3:-56225005 | MS.gene005013:CDS |
GGCAGCAGAAAGGAATGTCT+TGG | 0.517109 | 1.3:+56228901 | None:intergenic |
GGGTATTTGGGGACAAGGCA+AGG | 0.520194 | 1.3:+56226415 | None:intergenic |
GACTTATCCGTTAATGTTGA+AGG | 0.524073 | 1.3:-56225134 | MS.gene005013:CDS |
GCAGTATACTGAGTATATAG+AGG | 0.524531 | 1.3:+56225209 | None:intergenic |
CACAAGATAAGCCGCATACT+GGG | 0.525109 | 1.3:+56226395 | None:intergenic |
TATTGCAAAAGTCTTGGTCC+TGG | 0.535119 | 1.3:-56224999 | MS.gene005013:CDS |
CTAAGCTTTGTTGTGCACAT+TGG | 0.535781 | 1.3:-56225268 | MS.gene005013:CDS |
TACTGAGTATATAGAGGCAA+TGG | 0.536840 | 1.3:+56225215 | None:intergenic |
GGGGTGATGATAGACGCTAT+TGG | 0.538074 | 1.3:-56228508 | MS.gene005013:CDS |
CACCCATCGCTTCTCACACT+AGG | 0.543006 | 1.3:+56226219 | None:intergenic |
GCAAAAGTCTTGGTCCTGGA+TGG | 0.543644 | 1.3:-56224995 | MS.gene005013:CDS |
AGAGTCGATGAAATGAGAAT+CGG | 0.543980 | 1.3:+56228844 | None:intergenic |
TGGAGCATGTCCAATATAGC+AGG | 0.546256 | 1.3:-56224975 | MS.gene005013:CDS |
GTTGGAGCGTTGGCAAGTGA+AGG | 0.551096 | 1.3:+56228806 | None:intergenic |
ATGCATCATAACAGAGCAGT+AGG | 0.551413 | 1.3:-56226252 | MS.gene005013:CDS |
GAGTTATCAGTTGGTGCCGA+AGG | 0.554294 | 1.3:-56226330 | MS.gene005013:CDS |
TGTGAGAAGTGATGGGTGGT+TGG | 0.556044 | 1.3:-56224937 | MS.gene005013:CDS |
CATTCTCTCTCGCACAACTC+CGG | 0.556161 | 1.3:-56228951 | MS.gene005013:CDS |
CACCCATCACTTCTCACACA+AGG | 0.556449 | 1.3:+56224942 | None:intergenic |
GATCATTGTCGATGATGATA+GGG | 0.558501 | 1.3:+56228750 | None:intergenic |
ATATTGGACATGCTCCATCC+AGG | 0.559952 | 1.3:+56224981 | None:intergenic |
TTGCTGAGCTTCTTGAAGTG+TGG | 0.560466 | 1.3:-56226467 | MS.gene005013:CDS |
CACATTGGTTTGAAATATGT+GGG | 0.563857 | 1.3:-56225253 | MS.gene005013:CDS |
CGTCGGAATCGGCAGCAGAA+AGG | 0.567395 | 1.3:+56228891 | None:intergenic |
TGGATCCAAATGTGGAACAT+AGG | 0.568265 | 1.3:-56225082 | MS.gene005013:CDS |
GAGACAAATAATTGGAAGAG+AGG | 0.569382 | 1.3:-56226129 | MS.gene005013:CDS |
GGAAACGACGGAGAGTCTGC+CGG | 0.570360 | 1.3:+56228922 | None:intergenic |
CATACGAGCTCCTCTCATGA+TGG | 0.572203 | 1.3:+56225033 | None:intergenic |
AGGAATAGAAGTTAGGCCTA+AGG | 0.576288 | 1.3:-56224808 | MS.gene005013:CDS |
TGTGAGAAGCGATGGGTGGT+TGG | 0.576323 | 1.3:-56226214 | MS.gene005013:CDS |
TCTATCATCACCCCAAGCAA+TGG | 0.578653 | 1.3:+56228517 | None:intergenic |
GATCCAAATGTTGAAGTGGA+AGG | 0.581219 | 1.3:-56226276 | MS.gene005013:CDS |
AGATCTCTCTCCATTGCTTG+GGG | 0.585076 | 1.3:-56228527 | MS.gene005013:CDS |
TTTCAATTGGACAGAAAGAG+TGG | 0.585552 | 1.3:-56228575 | MS.gene005013:CDS |
CGCACAACTCCGGCTGACGC+CGG | 0.587266 | 1.3:-56228941 | MS.gene005013:CDS |
CATCATCGACAATGATCAGA+AGG | 0.590425 | 1.3:-56228744 | MS.gene005013:intron |
TTTGGATCCAAATGTTGAAG+TGG | 0.592404 | 1.3:-56226280 | MS.gene005013:CDS |
GTGGTTGGAGATCGAGATTG+GGG | 0.606434 | 1.3:-56226199 | MS.gene005013:CDS |
GAGTTTGAGGAATTATCGGA+AGG | 0.606592 | 1.3:-56228986 | MS.gene005013:CDS |
ACATTAACGGATAAGTCCAC+AGG | 0.607481 | 1.3:+56225140 | None:intergenic |
TTATCAGTTGGTGCCGAAGG+TGG | 0.607580 | 1.3:-56226327 | MS.gene005013:CDS |
AAGATTTGAGTACGTGCCTG+TGG | 0.611602 | 1.3:-56225156 | MS.gene005013:CDS |
AGCCGCATACTGGGTATTTG+GGG | 0.613317 | 1.3:+56226404 | None:intergenic |
TATCTGTTTGGATCCAAATG+TGG | 0.617024 | 1.3:-56225090 | MS.gene005013:CDS |
GTGGTTGGAGATTGAAATGG+GGG | 0.620504 | 1.3:-56224922 | MS.gene005013:CDS |
TGTCCTATAGAGTTATCAGT+TGG | 0.629309 | 1.3:-56226339 | MS.gene005013:CDS |
TGTGGTGGCTTGGTATTCGT+GGG | 0.637349 | 1.3:-56226449 | MS.gene005013:CDS |
ATACTGGGTATTTGGGGACA+AGG | 0.639049 | 1.3:+56226410 | None:intergenic |
TTATCCGTTAATGTTGAAGG+TGG | 0.642451 | 1.3:-56225131 | MS.gene005013:CDS |
GTCCTAGTGTGAGAAGCGAT+GGG | 0.643186 | 1.3:-56226221 | MS.gene005013:CDS |
CTTGTTACTACTCTGTCGTG+CGG | 0.643569 | 1.3:+56225059 | None:intergenic |
CGATGAAATGAGAATCGGAA+GGG | 0.647280 | 1.3:+56228849 | None:intergenic |
GGTGGTTGGAGATTGAAATG+GGG | 0.648046 | 1.3:-56224923 | MS.gene005013:CDS |
GCCCTTGTGTGAGAAGTGAT+GGG | 0.649485 | 1.3:-56224944 | MS.gene005013:CDS |
TTCAAGATGATTGATGCCCA+AGG | 0.650359 | 1.3:-56226372 | MS.gene005013:CDS |
GTCCCCAAATACCCAGTATG+CGG | 0.651631 | 1.3:-56226406 | MS.gene005013:CDS |
AAAGTGATTCCAGACGGCGT+CGG | 0.652221 | 1.3:+56228874 | None:intergenic |
TAACAAGCAACCATCATGAG+AGG | 0.656101 | 1.3:-56225043 | MS.gene005013:CDS |
AAGGAATGTCTTGGAAACGA+CGG | 0.661166 | 1.3:+56228910 | None:intergenic |
TCGATGAAATGAGAATCGGA+AGG | 0.671701 | 1.3:+56228848 | None:intergenic |
ACCCATCACTTCTCACACAA+GGG | 0.675848 | 1.3:+56224943 | None:intergenic |
AGGGAGAAAGTGATTCCAGA+CGG | 0.678403 | 1.3:+56228868 | None:intergenic |
CTTGTGTGAGAAGTGATGGG+TGG | 0.692248 | 1.3:-56224941 | MS.gene005013:CDS |
CTAGTGTGAGAAGCGATGGG+TGG | 0.709944 | 1.3:-56226218 | MS.gene005013:CDS |
AGTTGTGCGAGAGAGAATGG+CGG | 0.737972 | 1.3:+56228955 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTGATATTTTAAGATTTTTT+TGG | - | chr1.3:56225144-56225163 | MS.gene005013:CDS | 10.0% |
!! | AAAACAAATAGAAAACTTAA+GGG | + | chr1.3:56228422-56228441 | None:intergenic | 15.0% |
!! | AACTGTTAATGAAAATATAT+TGG | + | chr1.3:56225401-56225420 | None:intergenic | 15.0% |
!! | AATATAAATGTAAACATAGT+AGG | + | chr1.3:56227800-56227819 | None:intergenic | 15.0% |
!! | ACTGTTAATGAAAATATATT+GGG | + | chr1.3:56225400-56225419 | None:intergenic | 15.0% |
!! | TAAAACAAATAGAAAACTTA+AGG | + | chr1.3:56228423-56228442 | None:intergenic | 15.0% |
!! | TAAGTTATATATGTTGTTAT+AGG | + | chr1.3:56227108-56227127 | None:intergenic | 15.0% |
!! | TTATTGTAGTTTGATATATT+GGG | - | chr1.3:56227863-56227882 | MS.gene005013:intron | 15.0% |
!!! | ACTAAATTTTGTATTCATAA+AGG | + | chr1.3:56225435-56225454 | None:intergenic | 15.0% |
!!! | TTACATTTATATTTTTGTCA+TGG | - | chr1.3:56227807-56227826 | MS.gene005013:intron | 15.0% |
!!! | TTTAAATTTTGGTCTATTTA+AGG | - | chr1.3:56228025-56228044 | MS.gene005013:intron | 15.0% |
!!! | TTTAAGAAGTAAAAACATTT+TGG | + | chr1.3:56226681-56226700 | None:intergenic | 15.0% |
!! | AAAAAAAAAAAAAAACGCCA+TGG | + | chr1.3:56225963-56225982 | None:intergenic | 20.0% |
!! | AAATATATAGGATTGTTTGT+CGG | + | chr1.3:56226251-56226270 | None:intergenic | 20.0% |
!! | AAGAAAAATTTCTTTCTTGA+AGG | - | chr1.3:56228961-56228980 | MS.gene005013:CDS | 20.0% |
!! | AAGTGGAGAAAAATAAAAAT+AGG | + | chr1.3:56228329-56228348 | None:intergenic | 20.0% |
!! | ATAGCAATGAATTTATAGAA+AGG | + | chr1.3:56226438-56226457 | None:intergenic | 20.0% |
!! | ATATATGTTGTTATAGGAAA+AGG | + | chr1.3:56227102-56227121 | None:intergenic | 20.0% |
!! | ATGAATACAAAATTTAGTTG+AGG | - | chr1.3:56225437-56225456 | MS.gene005013:intron | 20.0% |
!! | CTTATTGTAGTTTGATATAT+TGG | - | chr1.3:56227862-56227881 | MS.gene005013:intron | 20.0% |
!! | TAATGAAAAATTCAAGGAAA+TGG | + | chr1.3:56225527-56225546 | None:intergenic | 20.0% |
!! | TGATGCAATGAAAAATATAT+AGG | + | chr1.3:56226263-56226282 | None:intergenic | 20.0% |
!! | TGTAAAGTAACAAACAAATT+GGG | + | chr1.3:56226311-56226330 | None:intergenic | 20.0% |
!! | TTGTAAAGTAACAAACAAAT+TGG | + | chr1.3:56226312-56226331 | None:intergenic | 20.0% |
!!! | AGGAATTTGAAATTCAATTT+AGG | + | chr1.3:56226418-56226437 | None:intergenic | 20.0% |
!!! | ATAACAATTCTTATGTTTTG+CGG | + | chr1.3:56228223-56228242 | None:intergenic | 20.0% |
!!! | CTTTATTTGAAACTGAATTA+CGG | + | chr1.3:56226617-56226636 | None:intergenic | 20.0% |
!!! | TTTTTTTTTTACAACCACTA+TGG | - | chr1.3:56225976-56225995 | MS.gene005013:intron | 20.0% |
! | AATAACAGAATTACAGATGA+AGG | + | chr1.3:56226189-56226208 | None:intergenic | 25.0% |
! | AATTAACAATTCACAGAGAA+AGG | + | chr1.3:56225504-56225523 | None:intergenic | 25.0% |
! | AGTAAATTCCTAAGAAAACA+TGG | + | chr1.3:56226970-56226989 | None:intergenic | 25.0% |
! | AGTAACAGTATGGATTTAAA+TGG | - | chr1.3:56228163-56228182 | MS.gene005013:intron | 25.0% |
! | CTTAAACTTATTAACTGTGT+AGG | - | chr1.3:56227124-56227143 | MS.gene005013:intron | 25.0% |
! | GATCAGTAATGAAAAATTCA+AGG | + | chr1.3:56225533-56225552 | None:intergenic | 25.0% |
! | GGACTTAGCAAATAAAATAA+TGG | + | chr1.3:56226476-56226495 | None:intergenic | 25.0% |
! | GTTAATGAAAATATATTGGG+TGG | + | chr1.3:56225397-56225416 | None:intergenic | 25.0% |
! | TAATAGACAAAGTAATTCAC+TGG | + | chr1.3:56227077-56227096 | None:intergenic | 25.0% |
! | TAGACCAAAATTTAAATCAC+TGG | + | chr1.3:56228021-56228040 | None:intergenic | 25.0% |
! | TAGTACTAAAATTGTCTGTT+TGG | - | chr1.3:56227491-56227510 | MS.gene005013:intron | 25.0% |
! | TTCTGCAATGATTAGAATAT+AGG | + | chr1.3:56227277-56227296 | None:intergenic | 25.0% |
!! | AATTTTTCATTACTGATCCA+TGG | - | chr1.3:56225535-56225554 | MS.gene005013:intron | 25.0% |
!! | ACAAAATGTGCTTTAAATCT+GGG | + | chr1.3:56225850-56225869 | None:intergenic | 25.0% |
!! | TACTCCAGTGATTTAAATTT+TGG | - | chr1.3:56228014-56228033 | MS.gene005013:intron | 25.0% |
!! | TTAGCTGTCATTTATTGATT+TGG | - | chr1.3:56227960-56227979 | MS.gene005013:intron | 25.0% |
!!! | AAAGCTATGTTTTAGATTCA+AGG | - | chr1.3:56228392-56228411 | MS.gene005013:intron | 25.0% |
!!! | ATCTGCATAGTTTCTTTTTT+TGG | - | chr1.3:56226214-56226233 | MS.gene005013:CDS | 25.0% |
!!! | CTTTTTGCATAAATTTTGAC+AGG | - | chr1.3:56228486-56228505 | MS.gene005013:CDS | 25.0% |
!!! | TAGCTATGTGTTTTGATATA+CGG | + | chr1.3:56225812-56225831 | None:intergenic | 25.0% |
AATACCAAAGGCTTAAAACA+GGG | + | chr1.3:56226347-56226366 | None:intergenic | 30.0% | |
AATCTCCTCAGATATTTGAT+AGG | - | chr1.3:56226809-56226828 | MS.gene005013:intron | 30.0% | |
ACTTAATATCTAAGCTAACC+TGG | + | chr1.3:56225329-56225348 | None:intergenic | 30.0% | |
AGACTCCAAATTACAAGTTA+CGG | + | chr1.3:56225903-56225922 | None:intergenic | 30.0% | |
AGATATTTGATAGGCACATA+TGG | - | chr1.3:56226818-56226837 | MS.gene005013:intron | 30.0% | |
AGGATGAAGTTCCAAAAAAT+AGG | + | chr1.3:56226853-56226872 | None:intergenic | 30.0% | |
ATGGTTGACAAAAACATCAT+CGG | + | chr1.3:56226545-56226564 | None:intergenic | 30.0% | |
CAAAATTTAGTTGAGGCAAA+TGG | - | chr1.3:56225444-56225463 | MS.gene005013:intron | 30.0% | |
CTGTTAAGGAGACAAATAAT+TGG | - | chr1.3:56227652-56227671 | MS.gene005013:intron | 30.0% | |
CTGTTGCAATACTATTATAC+TGG | - | chr1.3:56226714-56226733 | MS.gene005013:intron | 30.0% | |
CTTCCAGTATTGTCTAATAT+CGG | - | chr1.3:56225937-56225956 | MS.gene005013:intron | 30.0% | |
GAAATTCGAAAGGCAATTTA+CGG | + | chr1.3:56225596-56225615 | None:intergenic | 30.0% | |
GTAGTTTGATATATTGGGAT+TGG | - | chr1.3:56227868-56227887 | MS.gene005013:intron | 30.0% | |
TTCCTAAGAAAACATGGTAT+TGG | + | chr1.3:56226964-56226983 | None:intergenic | 30.0% | |
TTCTTGAAGGAATAGAAGTT+AGG | - | chr1.3:56227688-56227707 | MS.gene005013:intron | 30.0% | |
TTGTCATGGTTCAATATACT+GGG | - | chr1.3:56227821-56227840 | MS.gene005013:intron | 30.0% | |
TTTGAACTTCTTCATCTTCA+AGG | + | chr1.3:56228909-56228928 | None:intergenic | 30.0% | |
TTTGTCATGGTTCAATATAC+TGG | - | chr1.3:56227820-56227839 | MS.gene005013:intron | 30.0% | |
! | AATCATTGCAGAACTACTTT+TGG | - | chr1.3:56227284-56227303 | MS.gene005013:intron | 30.0% |
! | ATTTGAAACTGAATTACGGA+AGG | + | chr1.3:56226613-56226632 | None:intergenic | 30.0% |
! | GACAAAATGTGCTTTAAATC+TGG | + | chr1.3:56225851-56225870 | None:intergenic | 30.0% |
! | TACCAATACCATGTTTTCTT+AGG | - | chr1.3:56226959-56226978 | MS.gene005013:intron | 30.0% |
! | TGTTTTATGACGGCTTAATA+TGG | - | chr1.3:56226028-56226047 | MS.gene005013:intron | 30.0% |
!! | AGACAATTTTAGTACTACTG+TGG | + | chr1.3:56227488-56227507 | None:intergenic | 30.0% |
!! | CACATTGGTTTGAAATATGT+GGG | - | chr1.3:56228536-56228555 | MS.gene005013:CDS | 30.0% |
!! | TTTTGGTCTATTTAAGGCAT+TGG | - | chr1.3:56228031-56228050 | MS.gene005013:intron | 30.0% |
!!! | AGATACAGAGCTTTTTTTGT+TGG | + | chr1.3:56225004-56225023 | None:intergenic | 30.0% |
AAAACACATAGCTACTCCTT+GGG | - | chr1.3:56225818-56225837 | MS.gene005013:intron | 35.0% | |
AACATGTGTAGCAATACCAA+AGG | + | chr1.3:56226359-56226378 | None:intergenic | 35.0% | |
ACGTTTAACAGTAGATTGCT+TGG | + | chr1.3:56227006-56227025 | None:intergenic | 35.0% | |
AGACAATACTGGAAGTGATA+TGG | + | chr1.3:56225932-56225951 | None:intergenic | 35.0% | |
AGAGTCGATGAAATGAGAAT+CGG | + | chr1.3:56224948-56224967 | None:intergenic | 35.0% | |
AGATAGAAGAGTGAAGAGTA+TGG | + | chr1.3:56226133-56226152 | None:intergenic | 35.0% | |
AGTAAATGCTAACCACAAGA+AGG | + | chr1.3:56225643-56225662 | None:intergenic | 35.0% | |
ATACCTTCCACTTCAACATT+TGG | + | chr1.3:56227519-56227538 | None:intergenic | 35.0% | |
ATCTAAGCTAACCTGGAATT+AGG | + | chr1.3:56225322-56225341 | None:intergenic | 35.0% | |
ATGTGCCTATCAAATATCTG+AGG | + | chr1.3:56226817-56226836 | None:intergenic | 35.0% | |
ATTAACTGTGTAGGTCAACT+TGG | - | chr1.3:56227133-56227152 | MS.gene005013:intron | 35.0% | |
ATTGCTAATAAGCCTTGGAT+TGG | - | chr1.3:56225172-56225191 | MS.gene005013:CDS | 35.0% | |
ATTTCAACACATCCAATCCA+AGG | + | chr1.3:56225187-56225206 | None:intergenic | 35.0% | |
CAACTTGAATGTAATGAGCA+TGG | + | chr1.3:56226564-56226583 | None:intergenic | 35.0% | |
CAATACCAAAGGCTTAAAAC+AGG | + | chr1.3:56226348-56226367 | None:intergenic | 35.0% | |
GAATTGATGAATCCTTCTTG+TGG | - | chr1.3:56225628-56225647 | MS.gene005013:intron | 35.0% | |
GACAGAGTTTGAGGAATTAT+CGG | - | chr1.3:56224799-56224818 | MS.gene005013:CDS | 35.0% | |
GACTCCAAATTACAAGTTAC+GGG | + | chr1.3:56225902-56225921 | None:intergenic | 35.0% | |
GACTTATCCGTTAATGTTGA+AGG | - | chr1.3:56228655-56228674 | MS.gene005013:intron | 35.0% | |
GAGACAAATAATTGGAAGAG+AGG | - | chr1.3:56227660-56227679 | MS.gene005013:intron | 35.0% | |
GAGATTGGTGAAGAAAAGAA+AGG | + | chr1.3:56225574-56225593 | None:intergenic | 35.0% | |
GATCATTGTCGATGATGATA+GGG | + | chr1.3:56225042-56225061 | None:intergenic | 35.0% | |
GCAGTATACTGAGTATATAG+AGG | + | chr1.3:56228583-56228602 | None:intergenic | 35.0% | |
GGAAGGAATGTCAGAAAATA+TGG | + | chr1.3:56226596-56226615 | None:intergenic | 35.0% | |
GTCAGTCCTTCTTCATTATA+CGG | + | chr1.3:56228100-56228119 | None:intergenic | 35.0% | |
TACTGAGTATATAGAGGCAA+TGG | + | chr1.3:56228577-56228596 | None:intergenic | 35.0% | |
TATCTGTTTGGATCCAAATG+TGG | - | chr1.3:56228699-56228718 | MS.gene005013:intron | 35.0% | |
TATGGACAATTTGTGAAGGA+TGG | - | chr1.3:56225994-56226013 | MS.gene005013:intron | 35.0% | |
TGAAATGCAGAGCTTTCAAT+TGG | - | chr1.3:56225201-56225220 | MS.gene005013:CDS | 35.0% | |
TGAGGAGATTATAGACTACA+AGG | + | chr1.3:56226799-56226818 | None:intergenic | 35.0% | |
TGATCATTGTCGATGATGAT+AGG | + | chr1.3:56225043-56225062 | None:intergenic | 35.0% | |
TGTCCTATAGAGTTATCAGT+TGG | - | chr1.3:56227450-56227469 | MS.gene005013:intron | 35.0% | |
TTATCCGTTAATGTTGAAGG+TGG | - | chr1.3:56228658-56228677 | MS.gene005013:intron | 35.0% | |
TTCAGATTGCTAATAAGCCT+TGG | - | chr1.3:56225167-56225186 | MS.gene005013:CDS | 35.0% | |
TTTATGACGGCTTAATATGG+AGG | - | chr1.3:56226031-56226050 | MS.gene005013:intron | 35.0% | |
TTTCAATTGGACAGAAAGAG+TGG | - | chr1.3:56225214-56225233 | MS.gene005013:CDS | 35.0% | |
TTTCTCCACTTATTTGAGCA+GGG | - | chr1.3:56228338-56228357 | MS.gene005013:intron | 35.0% | |
TTTGGATCCAAATGTTGAAG+TGG | - | chr1.3:56227509-56227528 | MS.gene005013:intron | 35.0% | |
! | AGATAGATTTAGAGCTGCTA+TGG | + | chr1.3:56228684-56228703 | None:intergenic | 35.0% |
! | CTTGGATTAGAATATTCACC+AGG | + | chr1.3:56225738-56225757 | None:intergenic | 35.0% |
! | GTGAAGAAAAGAAAGGCATA+AGG | + | chr1.3:56225567-56225586 | None:intergenic | 35.0% |
! | GTTACCCGTAACTTGTAATT+TGG | - | chr1.3:56225895-56225914 | MS.gene005013:intron | 35.0% |
! | TCATTCATTCTTCACTGACT+TGG | + | chr1.3:56225756-56225775 | None:intergenic | 35.0% |
! | TTGGGATTGGATAACTGTTT+TGG | - | chr1.3:56227881-56227900 | MS.gene005013:intron | 35.0% |
! | TTTTCTCCACTTATTTGAGC+AGG | - | chr1.3:56228337-56228356 | MS.gene005013:intron | 35.0% |
!! | CAGCTCTAAATCTATCTGTT+TGG | - | chr1.3:56228687-56228706 | MS.gene005013:intron | 35.0% |
!! | GCACATTGGTTTGAAATATG+TGG | - | chr1.3:56228535-56228554 | MS.gene005013:CDS | 35.0% |
!! | GGGCAGAGATTTTAAAAATG+TGG | + | chr1.3:56226291-56226310 | None:intergenic | 35.0% |
AAACTCCCTGCTCAAATAAG+TGG | + | chr1.3:56228346-56228365 | None:intergenic | 40.0% | |
AACATTCCACGAACTATGCA+AGG | - | chr1.3:56227731-56227750 | MS.gene005013:intron | 40.0% | |
AAGAACCAATAGCGTATCAC+TGG | + | chr1.3:56225478-56225497 | None:intergenic | 40.0% | |
AAGAGAGGTCTCTTTCTTGA+AGG | - | chr1.3:56227675-56227694 | MS.gene005013:intron | 40.0% | |
AAGGAATGTCTTGGAAACGA+CGG | + | chr1.3:56224882-56224901 | None:intergenic | 40.0% | |
AATGGAAGCAGTGTCTTAAG+TGG | - | chr1.3:56228181-56228200 | MS.gene005013:intron | 40.0% | |
ACAAAGTAATTCACTGGCCA+CGG | + | chr1.3:56227071-56227090 | None:intergenic | 40.0% | |
ACAGAAACTTGTACAAGCAC+TGG | + | chr1.3:56225877-56225896 | None:intergenic | 40.0% | |
ACATTCCACGAACTATGCAA+GGG | - | chr1.3:56227732-56227751 | MS.gene005013:intron | 40.0% | |
ACTGAGTGAAAAGCTGAAAG+TGG | + | chr1.3:56227253-56227272 | None:intergenic | 40.0% | |
AGGAATAGAAGTTAGGCCTA+AGG | - | chr1.3:56227695-56227714 | MS.gene005013:intron | 40.0% | |
AGGCACGTACTCAAATCTTT+GGG | + | chr1.3:56228632-56228651 | None:intergenic | 40.0% | |
ATCGTGCTTGAGTAACAGTA+TGG | - | chr1.3:56228153-56228172 | MS.gene005013:intron | 40.0% | |
ATGATAGACGCTATTGGAAC+TGG | - | chr1.3:56225287-56225306 | MS.gene005013:intron | 40.0% | |
ATGCATCATAACAGAGCAGT+AGG | - | chr1.3:56227537-56227556 | MS.gene005013:intron | 40.0% | |
ATGGCCACCTTCAACATTAA+CGG | + | chr1.3:56228665-56228684 | None:intergenic | 40.0% | |
ATTGGGGAGTTTGTCAATTC+AGG | - | chr1.3:56227606-56227625 | MS.gene005013:intron | 40.0% | |
CAAAACACATAGCTACTCCT+TGG | - | chr1.3:56225817-56225836 | MS.gene005013:intron | 40.0% | |
CAACAAAGCTTAGCAACTTC+AGG | + | chr1.3:56228514-56228533 | None:intergenic | 40.0% | |
CATCATCGACAATGATCAGA+AGG | - | chr1.3:56225045-56225064 | MS.gene005013:CDS | 40.0% | |
CCACTATGGACAATTTGTGA+AGG | - | chr1.3:56225990-56226009 | MS.gene005013:intron | 40.0% | |
CCTTCACAAATTGTCCATAG+TGG | + | chr1.3:56225993-56226012 | None:intergenic | 40.0% | |
CGATGAAATGAGAATCGGAA+GGG | + | chr1.3:56224943-56224962 | None:intergenic | 40.0% | |
GAAAGGCAATTTACGGAGAT+TGG | + | chr1.3:56225589-56225608 | None:intergenic | 40.0% | |
GAGTTTGAGGAATTATCGGA+AGG | - | chr1.3:56224803-56224822 | MS.gene005013:CDS | 40.0% | |
GATCCAAATGTTGAAGTGGA+AGG | - | chr1.3:56227513-56227532 | MS.gene005013:intron | 40.0% | |
GCACCAACTGATAACTCTAT+AGG | + | chr1.3:56227456-56227475 | None:intergenic | 40.0% | |
GCATTGCAATCCTGCTATAT+TGG | + | chr1.3:56228827-56228846 | None:intergenic | 40.0% | |
GCTGAACCGTATAATGAAGA+AGG | - | chr1.3:56228091-56228110 | MS.gene005013:intron | 40.0% | |
GGATTAGAATATTCACCAGG+AGG | + | chr1.3:56225735-56225754 | None:intergenic | 40.0% | |
GGATTTCTATGCCTAATTCC+AGG | - | chr1.3:56225308-56225327 | MS.gene005013:intron | 40.0% | |
GTAAGATGTAGTGCAAATGC+AGG | + | chr1.3:56226942-56226961 | None:intergenic | 40.0% | |
GTATTGTCTAATATCGGCCA+TGG | - | chr1.3:56225943-56225962 | MS.gene005013:intron | 40.0% | |
GTGAAGAATGAATGACCACA+AGG | - | chr1.3:56225761-56225780 | MS.gene005013:intron | 40.0% | |
TAAATCTGGGTTTGAACCCA+AGG | + | chr1.3:56225837-56225856 | None:intergenic | 40.0% | |
TAACAAGCAACCATCATGAG+AGG | - | chr1.3:56228746-56228765 | MS.gene005013:CDS | 40.0% | |
TAGATCTCTCTCCATTGCTT+GGG | - | chr1.3:56225261-56225280 | MS.gene005013:CDS | 40.0% | |
TATCACAAACTAGTGAGTGC+TGG | + | chr1.3:56228132-56228151 | None:intergenic | 40.0% | |
TCATCAATTCCTTGTGCAAC+TGG | + | chr1.3:56225618-56225637 | None:intergenic | 40.0% | |
TCATCTGGACTTCATCTTCT+AGG | + | chr1.3:56227632-56227651 | None:intergenic | 40.0% | |
TCGATGAAATGAGAATCGGA+AGG | + | chr1.3:56224944-56224963 | None:intergenic | 40.0% | |
TCTTGTAATCTCCGACAACA+GGG | - | chr1.3:56225074-56225093 | MS.gene005013:CDS | 40.0% | |
TGAAGTCCAGATGACTGTTA+AGG | - | chr1.3:56227638-56227657 | MS.gene005013:intron | 40.0% | |
TGCTAAGTCCTTAACTAGTC+AGG | - | chr1.3:56226486-56226505 | MS.gene005013:intron | 40.0% | |
TGGATCCAAATGTGGAACAT+AGG | - | chr1.3:56228707-56228726 | MS.gene005013:intron | 40.0% | |
TGGCCGATATTAGACAATAC+TGG | + | chr1.3:56225943-56225962 | None:intergenic | 40.0% | |
TGTGCAACTGGAAATTCGAA+AGG | + | chr1.3:56225606-56225625 | None:intergenic | 40.0% | |
TTCAAGATGATTGATGCCCA+AGG | - | chr1.3:56227417-56227436 | MS.gene005013:intron | 40.0% | |
TTCGAATTTCCAGTTGCACA+AGG | - | chr1.3:56225606-56225625 | MS.gene005013:intron | 40.0% | |
TTCTTGTAATCTCCGACAAC+AGG | - | chr1.3:56225073-56225092 | MS.gene005013:CDS | 40.0% | |
TTGATAGGCACATATGGCTA+CGG | - | chr1.3:56226824-56226843 | MS.gene005013:intron | 40.0% | |
TTGTCTCCTTAACAGTCATC+TGG | + | chr1.3:56227647-56227666 | None:intergenic | 40.0% | |
TTTGTGCTTCAAGCTGAACT+CGG | + | chr1.3:56226163-56226182 | None:intergenic | 40.0% | |
! | AACGTTCATTTGTGCCATTG+TGG | - | chr1.3:56227021-56227040 | MS.gene005013:intron | 40.0% |
! | AAGTGAAGTGTTATCGATGG+TGG | + | chr1.3:56226086-56226105 | None:intergenic | 40.0% |
! | ACATTAACGGATAAGTCCAC+AGG | + | chr1.3:56228652-56228671 | None:intergenic | 40.0% |
! | CTGAAGTGAAGTGTTATCGA+TGG | + | chr1.3:56226089-56226108 | None:intergenic | 40.0% |
! | GTTGCTGAATGGTCTTACTT+AGG | + | chr1.3:56227714-56227733 | None:intergenic | 40.0% |
! | TCATATTTTCAACTGCCTCC+TGG | - | chr1.3:56225717-56225736 | MS.gene005013:intron | 40.0% |
! | TGCACTGTGGTGTTTTATGA+CGG | - | chr1.3:56226018-56226037 | MS.gene005013:intron | 40.0% |
! | TTATGGGCTGAACGAGTTAA+AGG | - | chr1.3:56227161-56227180 | MS.gene005013:intron | 40.0% |
!! | AGGACAGTTCTGAAATCCTT+GGG | + | chr1.3:56227436-56227455 | None:intergenic | 40.0% |
!! | CTAAGCTTTGTTGTGCACAT+TGG | - | chr1.3:56228521-56228540 | MS.gene005013:CDS | 40.0% |
!! | TAGGACAGTTCTGAAATCCT+TGG | + | chr1.3:56227437-56227456 | None:intergenic | 40.0% |
!! | TTGCAGAACTACTTTTGGAC+AGG | - | chr1.3:56227289-56227308 | MS.gene005013:intron | 40.0% |
!!! | AGCTTTTTTTGTTGGAGCGT+TGG | + | chr1.3:56224996-56225015 | None:intergenic | 40.0% |
!!! | ATGTGTTTTGATATACGGCG+TGG | + | chr1.3:56225807-56225826 | None:intergenic | 40.0% |
!!! | GGATTTTTTCCTTTCCACCA+TGG | - | chr1.3:56226052-56226071 | MS.gene005013:intron | 40.0% |
AAGATTTGAGTACGTGCCTG+TGG | - | chr1.3:56228633-56228652 | MS.gene005013:intron | 45.0% | |
AAGCCGCATACTGGGTATTT+GGG | + | chr1.3:56227389-56227408 | None:intergenic | 45.0% | |
AATCTCCGACAACAGGGAAA+GGG | - | chr1.3:56225080-56225099 | MS.gene005013:CDS | 45.0% | |
ACACAAGATAAGCCGCATAC+TGG | + | chr1.3:56227398-56227417 | None:intergenic | 45.0% | |
ACCCATCACTTCTCACACAA+GGG | + | chr1.3:56228849-56228868 | None:intergenic | 45.0% | |
ACTGTGTAGGTCAACTTGGT+TGG | - | chr1.3:56227137-56227156 | MS.gene005013:intron | 45.0% | |
AGATCTCTCTCCATTGCTTG+GGG | - | chr1.3:56225262-56225281 | MS.gene005013:CDS | 45.0% | |
AGGGAGAAAGTGATTCCAGA+CGG | + | chr1.3:56224924-56224943 | None:intergenic | 45.0% | |
AGGTCAACTTGGTTGGGTTA+TGG | - | chr1.3:56227144-56227163 | MS.gene005013:intron | 45.0% | |
AGTGTCCAGTGATACGCTAT+TGG | - | chr1.3:56225470-56225489 | MS.gene005013:intron | 45.0% | |
ATACTGGGTATTTGGGGACA+AGG | + | chr1.3:56227382-56227401 | None:intergenic | 45.0% | |
ATATTGGACATGCTCCATCC+AGG | + | chr1.3:56228811-56228830 | None:intergenic | 45.0% | |
CAAGAAGCTCAGCAACTTCA+GGG | + | chr1.3:56227317-56227336 | None:intergenic | 45.0% | |
CACAAGATAAGCCGCATACT+GGG | + | chr1.3:56227397-56227416 | None:intergenic | 45.0% | |
CAGATACTCAGTCTCCACAA+TGG | + | chr1.3:56227038-56227057 | None:intergenic | 45.0% | |
CAGGCACGTACTCAAATCTT+TGG | + | chr1.3:56228633-56228652 | None:intergenic | 45.0% | |
CATTCCACGAACTATGCAAG+GGG | - | chr1.3:56227733-56227752 | MS.gene005013:intron | 45.0% | |
CTAGATCTCTCTCCATTGCT+TGG | - | chr1.3:56225260-56225279 | MS.gene005013:CDS | 45.0% | |
CTGTGTAGGTCAACTTGGTT+GGG | - | chr1.3:56227138-56227157 | MS.gene005013:intron | 45.0% | |
CTTGTTACTACTCTGTCGTG+CGG | + | chr1.3:56228733-56228752 | None:intergenic | 45.0% | |
GAGTTCAGCTTGAAGCACAA+AGG | - | chr1.3:56226162-56226181 | MS.gene005013:CDS | 45.0% | |
GGGTGGTTGGAGATTGAAAT+GGG | - | chr1.3:56228865-56228884 | MS.gene005013:CDS | 45.0% | |
GGTCAACTTGGTTGGGTTAT+GGG | - | chr1.3:56227145-56227164 | MS.gene005013:intron | 45.0% | |
GGTGGTTGGAGATTGAAATG+GGG | - | chr1.3:56228866-56228885 | MS.gene005013:CDS | 45.0% | |
GTGGTTGGAGATTGAAATGG+GGG | - | chr1.3:56228867-56228886 | MS.gene005013:CDS | 45.0% | |
GTTCGTGGAATGTTGCTGAA+TGG | + | chr1.3:56227725-56227744 | None:intergenic | 45.0% | |
TAAGCCGCATACTGGGTATT+TGG | + | chr1.3:56227390-56227409 | None:intergenic | 45.0% | |
TAATCTCCGACAACAGGGAA+AGG | - | chr1.3:56225079-56225098 | MS.gene005013:CDS | 45.0% | |
TCAAGAAGCTCAGCAACTTC+AGG | + | chr1.3:56227318-56227337 | None:intergenic | 45.0% | |
TCTATCATCACCCCAAGCAA+TGG | + | chr1.3:56225275-56225294 | None:intergenic | 45.0% | |
TGGAGCATGTCCAATATAGC+AGG | - | chr1.3:56228814-56228833 | MS.gene005013:CDS | 45.0% | |
TGGGTGGTTGGAGATTGAAA+TGG | - | chr1.3:56228864-56228883 | MS.gene005013:CDS | 45.0% | |
TGTCCAGGTATCTATGCATG+TGG | + | chr1.3:56226915-56226934 | None:intergenic | 45.0% | |
TTGCTGAGCTTCTTGAAGTG+TGG | - | chr1.3:56227322-56227341 | MS.gene005013:intron | 45.0% | |
TTTCTCCCTTTCCCTGTTGT+CGG | + | chr1.3:56225088-56225107 | None:intergenic | 45.0% | |
! | AAGGCATAAGGCATCTTCCA+TGG | + | chr1.3:56225555-56225574 | None:intergenic | 45.0% |
!! | AAACTAGTGAGTGCTGGAGA+AGG | + | chr1.3:56228126-56228145 | None:intergenic | 45.0% |
!! | GAAGTGTTATCGATGGTGGA+TGG | + | chr1.3:56226082-56226101 | None:intergenic | 45.0% |
!!! | GGCTACGGTCTCCTATTTTT+TGG | - | chr1.3:56226839-56226858 | MS.gene005013:intron | 45.0% |
!! | ATTTAAATATTTAAAAGTTA+TGG | - | chr1.3:56228295-56228314 | MS.gene005013:intron | 5.0% |
!!! | TATTTGTTTTATTTTATTTT+TGG | - | chr1.3:56228432-56228451 | MS.gene005013:intron | 5.0% |
AAACCGAGTCAGCATGCGTA+TGG | - | chr1.3:56226772-56226791 | MS.gene005013:intron | 50.0% | |
AAAGTGATTCCAGACGGCGT+CGG | + | chr1.3:56224918-56224937 | None:intergenic | 50.0% | |
AACCCTCAACTCTGAACGCT+GGG | - | chr1.3:56227983-56228002 | MS.gene005013:intron | 50.0% | |
AACCGAGTCAGCATGCGTAT+GGG | - | chr1.3:56226773-56226792 | MS.gene005013:intron | 50.0% | |
AGCCGCATACTGGGTATTTG+GGG | + | chr1.3:56227388-56227407 | None:intergenic | 50.0% | |
AGGCCACATGCATAGATACC+TGG | - | chr1.3:56226909-56226928 | MS.gene005013:intron | 50.0% | |
AGTACTACTGTGGCCACCTT+CGG | + | chr1.3:56227478-56227497 | None:intergenic | 50.0% | |
AGTTGTGCGAGAGAGAATGG+CGG | + | chr1.3:56224837-56224856 | None:intergenic | 50.0% | |
ATCCTTACACTTGCAGCTGC+AGG | - | chr1.3:56226868-56226887 | MS.gene005013:intron | 50.0% | |
CACCCATCACTTCTCACACA+AGG | + | chr1.3:56228850-56228869 | None:intergenic | 50.0% | |
CATACGAGCTCCTCTCATGA+TGG | + | chr1.3:56228759-56228778 | None:intergenic | 50.0% | |
CATTCTCTCTCGCACAACTC+CGG | - | chr1.3:56224838-56224857 | MS.gene005013:CDS | 50.0% | |
CCTTAACTAGTCAGGACAGC+AGG | - | chr1.3:56226494-56226513 | MS.gene005013:intron | 50.0% | |
CTGAGCTTCTTGAAGTGTGG+TGG | - | chr1.3:56227325-56227344 | MS.gene005013:intron | 50.0% | |
CTTCTTGAAGTGTGGTGGCT+TGG | - | chr1.3:56227330-56227349 | MS.gene005013:intron | 50.0% | |
CTTGCAGCTGCAGGAATATG+CGG | - | chr1.3:56226877-56226896 | MS.gene005013:intron | 50.0% | |
GCCCTTGTGTGAGAAGTGAT+GGG | - | chr1.3:56228845-56228864 | MS.gene005013:CDS | 50.0% | |
GGAATATGCGGAAGCTGACT+AGG | - | chr1.3:56226889-56226908 | MS.gene005013:intron | 50.0% | |
GGAGACTGAGTATCTGTCCT+TGG | - | chr1.3:56227042-56227061 | MS.gene005013:intron | 50.0% | |
GGCAGCAGAAAGGAATGTCT+TGG | + | chr1.3:56224891-56224910 | None:intergenic | 50.0% | |
GGGGTGATGATAGACGCTAT+TGG | - | chr1.3:56225281-56225300 | MS.gene005013:CDS | 50.0% | |
GGTGGTTGGAGATCGAGATT+GGG | - | chr1.3:56227589-56227608 | MS.gene005013:intron | 50.0% | |
GTCCCCAAATACCCAGTATG+CGG | - | chr1.3:56227383-56227402 | MS.gene005013:intron | 50.0% | |
GTCCTAGTGTGAGAAGCGAT+GGG | - | chr1.3:56227568-56227587 | MS.gene005013:intron | 50.0% | |
GTGGTTGGAGATCGAGATTG+GGG | - | chr1.3:56227590-56227609 | MS.gene005013:intron | 50.0% | |
TAACTAGTCAGGACAGCAGG+TGG | - | chr1.3:56226497-56226516 | MS.gene005013:intron | 50.0% | |
TGCCCTTGTGTGAGAAGTGA+TGG | - | chr1.3:56228844-56228863 | MS.gene005013:CDS | 50.0% | |
TGCGGCCTATGTTCCACATT+TGG | + | chr1.3:56228715-56228734 | None:intergenic | 50.0% | |
TTCCTGCAGCTGCAAGTGTA+AGG | + | chr1.3:56226873-56226892 | None:intergenic | 50.0% | |
! | CCTGCTGTCCTGACTAGTTA+AGG | + | chr1.3:56226497-56226516 | None:intergenic | 50.0% |
! | CTTGTGTGAGAAGTGATGGG+TGG | - | chr1.3:56228848-56228867 | MS.gene005013:CDS | 50.0% |
!! | GAGTTATCAGTTGGTGCCGA+AGG | - | chr1.3:56227459-56227478 | MS.gene005013:intron | 50.0% |
!! | GCAGCCCTGTTTTAAGCCTT+TGG | - | chr1.3:56226340-56226359 | MS.gene005013:CDS | 50.0% |
!! | TGTGAGAAGTGATGGGTGGT+TGG | - | chr1.3:56228852-56228871 | MS.gene005013:CDS | 50.0% |
!! | TGTGGTGGCTTGGTATTCGT+GGG | - | chr1.3:56227340-56227359 | MS.gene005013:intron | 50.0% |
!! | TTATCAGTTGGTGCCGAAGG+TGG | - | chr1.3:56227462-56227481 | MS.gene005013:intron | 50.0% |
AACACTACGGTGGCACCTTG+TGG | + | chr1.3:56225779-56225798 | None:intergenic | 55.0% | |
ACCCTCAACTCTGAACGCTG+GGG | - | chr1.3:56227984-56228003 | MS.gene005013:intron | 55.0% | |
AGGACCCCTTGCATAGTTCG+TGG | + | chr1.3:56227740-56227759 | None:intergenic | 55.0% | |
ATGAGAGGAGCTCGTATGCC+AGG | - | chr1.3:56228761-56228780 | MS.gene005013:CDS | 55.0% | |
CACCCATCGCTTCTCACACT+AGG | + | chr1.3:56227573-56227592 | None:intergenic | 55.0% | |
CGGAGTTGTGCGAGAGAGAA+TGG | + | chr1.3:56224840-56224859 | None:intergenic | 55.0% | |
CGTCCTAGTGTGAGAAGCGA+TGG | - | chr1.3:56227567-56227586 | MS.gene005013:intron | 55.0% | |
CTAGTGTGAGAAGCGATGGG+TGG | - | chr1.3:56227571-56227590 | MS.gene005013:intron | 55.0% | |
GAACCCTCAACTCTGAACGC+TGG | - | chr1.3:56227982-56228001 | MS.gene005013:intron | 55.0% | |
GCAAATGCAGGTCTGTGTCC+AGG | + | chr1.3:56226930-56226949 | None:intergenic | 55.0% | |
GGGTATTTGGGGACAAGGCA+AGG | + | chr1.3:56227377-56227396 | None:intergenic | 55.0% | |
GGGTGGTTGGAGATCGAGAT+TGG | - | chr1.3:56227588-56227607 | MS.gene005013:intron | 55.0% | |
TGTGAAGGATGGCTGCACTG+TGG | - | chr1.3:56226005-56226024 | MS.gene005013:intron | 55.0% | |
TGTGAGAAGCGATGGGTGGT+TGG | - | chr1.3:56227575-56227594 | MS.gene005013:intron | 55.0% | |
TGTTACGCCACCTAAGACGC+AGG | + | chr1.3:56227760-56227779 | None:intergenic | 55.0% | |
! | ATTCCAGACGGCGTCGGAAT+CGG | + | chr1.3:56224912-56224931 | None:intergenic | 55.0% |
! | GATGGCAGACCATGGTGGAA+AGG | + | chr1.3:56226064-56226083 | None:intergenic | 55.0% |
!! | CGCATGCTGACTCGGTTTGT+TGG | + | chr1.3:56226770-56226789 | None:intergenic | 55.0% |
!! | CGGCGTGGCTTTGAACACTA+CGG | + | chr1.3:56225792-56225811 | None:intergenic | 55.0% |
!! | CGTGGCTTTGAACACTACGG+TGG | + | chr1.3:56225789-56225808 | None:intergenic | 55.0% |
!! | GTGTGGTGGCTTGGTATTCG+TGG | - | chr1.3:56227339-56227358 | MS.gene005013:intron | 55.0% |
!! | GTTGGAGCGTTGGCAAGTGA+AGG | + | chr1.3:56224986-56225005 | None:intergenic | 55.0% |
AAGGGGTCCTGCGTCTTAGG+TGG | - | chr1.3:56227750-56227769 | MS.gene005013:intron | 60.0% | |
AGCCCCAGCGTTCAGAGTTG+AGG | + | chr1.3:56227989-56228008 | None:intergenic | 60.0% | |
AGGACAGCAGGTGGTCGTTG+AGG | - | chr1.3:56226506-56226525 | MS.gene005013:intron | 60.0% | |
CGTCGGAATCGGCAGCAGAA+AGG | + | chr1.3:56224901-56224920 | None:intergenic | 60.0% | |
GCCCCAGCGTTCAGAGTTGA+GGG | + | chr1.3:56227988-56228007 | None:intergenic | 60.0% | |
GGAAACGACGGAGAGTCTGC+CGG | + | chr1.3:56224870-56224889 | None:intergenic | 60.0% | |
GTATCTGTCCTTGGCAGCCG+TGG | - | chr1.3:56227051-56227070 | MS.gene005013:intron | 60.0% | |
TGCAAGGGGTCCTGCGTCTT+AGG | - | chr1.3:56227747-56227766 | MS.gene005013:intron | 60.0% | |
! | GGCCCATACGCATGCTGACT+CGG | + | chr1.3:56226778-56226797 | None:intergenic | 60.0% |
! | TGGTGGATGGCAGACCATGG+TGG | + | chr1.3:56226069-56226088 | None:intergenic | 60.0% |
!! | CGATGGTGGATGGCAGACCA+TGG | + | chr1.3:56226072-56226091 | None:intergenic | 60.0% |
TTCACTGGCCACGGCTGCCA+AGG | + | chr1.3:56227062-56227081 | None:intergenic | 65.0% | |
CGCACAACTCCGGCTGACGC+CGG | - | chr1.3:56224848-56224867 | MS.gene005013:CDS | 70.0% | |
GAGAGTCTGCCGGCGTCAGC+CGG | + | chr1.3:56224860-56224879 | None:intergenic | 70.0% | |
!! | CTGCCGATTCCGACGCCGTC+TGG | - | chr1.3:56224906-56224925 | MS.gene005013:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 56224797 | 56229014 | 56224797 | ID=MS.gene005013 |
chr1.3 | mRNA | 56224797 | 56229014 | 56224797 | ID=MS.gene005013.t1;Parent=MS.gene005013 |
chr1.3 | exon | 56228745 | 56229014 | 56228745 | ID=MS.gene005013.t1.exon1;Parent=MS.gene005013.t1 |
chr1.3 | CDS | 56228745 | 56229014 | 56228745 | ID=cds.MS.gene005013.t1;Parent=MS.gene005013.t1 |
chr1.3 | exon | 56228482 | 56228600 | 56228482 | ID=MS.gene005013.t1.exon2;Parent=MS.gene005013.t1 |
chr1.3 | CDS | 56228482 | 56228600 | 56228482 | ID=cds.MS.gene005013.t1;Parent=MS.gene005013.t1 |
chr1.3 | exon | 56226096 | 56226500 | 56226096 | ID=MS.gene005013.t1.exon3;Parent=MS.gene005013.t1 |
chr1.3 | CDS | 56226096 | 56226500 | 56226096 | ID=cds.MS.gene005013.t1;Parent=MS.gene005013.t1 |
chr1.3 | exon | 56225398 | 56225452 | 56225398 | ID=MS.gene005013.t1.exon4;Parent=MS.gene005013.t1 |
chr1.3 | CDS | 56225398 | 56225452 | 56225398 | ID=cds.MS.gene005013.t1;Parent=MS.gene005013.t1 |
chr1.3 | exon | 56224797 | 56225303 | 56224797 | ID=MS.gene005013.t1.exon5;Parent=MS.gene005013.t1 |
chr1.3 | CDS | 56224797 | 56225303 | 56224797 | ID=cds.MS.gene005013.t1;Parent=MS.gene005013.t1 |
Gene Sequence |
Protein sequence |