Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74864.t1 | XP_003590877.1 | 77.2 | 285 | 53 | 4 | 1 | 282 | 1 | 276 | 3.00E-115 | 424.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74864.t1 | Q949S5 | 42.0 | 276 | 132 | 8 | 7 | 278 | 4 | 255 | 1.9e-46 | 187.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74864.t1 | G7I5K7 | 77.2 | 285 | 53 | 4 | 1 | 282 | 1 | 276 | 2.2e-115 | 424.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74864.t1 | MTR_1g079230 | 77.193 | 285 | 53 | 4 | 1 | 282 | 1 | 276 | 1.56e-149 | 419 |
| MS.gene74864.t1 | MTR_1g100597 | 69.474 | 285 | 74 | 4 | 1 | 282 | 1 | 275 | 1.92e-133 | 379 |
| MS.gene74864.t1 | MTR_1g079370 | 63.830 | 282 | 82 | 3 | 1 | 279 | 1 | 265 | 1.03e-119 | 343 |
| MS.gene74864.t1 | MTR_1g079180 | 64.561 | 285 | 75 | 5 | 1 | 279 | 1 | 265 | 1.34e-117 | 338 |
| MS.gene74864.t1 | MTR_1g079260 | 63.287 | 286 | 90 | 4 | 1 | 282 | 1 | 275 | 1.48e-115 | 333 |
| MS.gene74864.t1 | MTR_1g079460 | 64.014 | 289 | 77 | 6 | 1 | 282 | 1 | 269 | 1.61e-114 | 330 |
| MS.gene74864.t1 | MTR_1g079200 | 61.620 | 284 | 84 | 5 | 1 | 279 | 1 | 264 | 5.22e-110 | 319 |
| MS.gene74864.t1 | MTR_1g079380 | 62.324 | 284 | 87 | 3 | 1 | 281 | 1 | 267 | 2.30e-108 | 316 |
| MS.gene74864.t1 | MTR_1g079850 | 61.356 | 295 | 90 | 7 | 1 | 282 | 1 | 284 | 4.28e-107 | 312 |
| MS.gene74864.t1 | MTR_1g100613 | 67.220 | 241 | 75 | 2 | 20 | 257 | 5 | 244 | 8.96e-107 | 310 |
| MS.gene74864.t1 | MTR_3g452600 | 57.092 | 282 | 97 | 4 | 4 | 282 | 10 | 270 | 4.04e-97 | 286 |
| MS.gene74864.t1 | MTR_3g006850 | 54.723 | 307 | 106 | 7 | 4 | 282 | 17 | 318 | 8.25e-94 | 280 |
| MS.gene74864.t1 | MTR_1g026510 | 54.392 | 296 | 111 | 7 | 1 | 282 | 1 | 286 | 2.52e-93 | 278 |
| MS.gene74864.t1 | MTR_1g079250 | 58.076 | 291 | 103 | 6 | 1 | 282 | 1 | 281 | 6.15e-90 | 269 |
| MS.gene74864.t1 | MTR_3g450990 | 52.000 | 300 | 100 | 6 | 4 | 282 | 10 | 286 | 1.30e-87 | 263 |
| MS.gene74864.t1 | MTR_1g079410 | 51.736 | 288 | 109 | 7 | 2 | 279 | 6 | 273 | 4.19e-83 | 251 |
| MS.gene74864.t1 | MTR_2g079100 | 52.708 | 277 | 101 | 6 | 5 | 276 | 10 | 261 | 7.80e-83 | 250 |
| MS.gene74864.t1 | MTR_1g079350 | 50.853 | 293 | 112 | 10 | 1 | 279 | 1 | 275 | 1.59e-80 | 244 |
| MS.gene74864.t1 | MTR_7g096300 | 53.571 | 280 | 92 | 10 | 1 | 269 | 1 | 253 | 1.95e-73 | 239 |
| MS.gene74864.t1 | MTR_1g079340 | 48.039 | 306 | 112 | 10 | 1 | 279 | 40 | 325 | 2.55e-73 | 228 |
| MS.gene74864.t1 | MTR_1g079140 | 43.234 | 303 | 142 | 7 | 4 | 282 | 13 | 309 | 3.92e-67 | 211 |
| MS.gene74864.t1 | MTR_1g079240 | 55.825 | 206 | 60 | 4 | 77 | 279 | 2 | 179 | 2.64e-64 | 199 |
| MS.gene74864.t1 | MTR_1g079400 | 41.724 | 290 | 131 | 7 | 5 | 279 | 13 | 279 | 2.05e-60 | 193 |
| MS.gene74864.t1 | MTR_7g112550 | 42.759 | 290 | 143 | 10 | 2 | 279 | 5 | 283 | 3.73e-60 | 192 |
| MS.gene74864.t1 | MTR_1g079210 | 79.675 | 123 | 25 | 0 | 126 | 248 | 7 | 129 | 1.41e-58 | 184 |
| MS.gene74864.t1 | MTR_1g078470 | 54.000 | 200 | 68 | 4 | 82 | 279 | 7 | 184 | 1.15e-57 | 183 |
| MS.gene74864.t1 | MTR_1g083580 | 36.237 | 287 | 163 | 7 | 2 | 279 | 6 | 281 | 6.28e-52 | 171 |
| MS.gene74864.t1 | MTR_7g112560 | 37.895 | 285 | 142 | 10 | 4 | 280 | 1 | 258 | 3.16e-47 | 159 |
| MS.gene74864.t1 | MTR_4g023570 | 35.587 | 281 | 134 | 5 | 4 | 280 | 1 | 238 | 2.51e-44 | 150 |
| MS.gene74864.t1 | MTR_1g076870 | 58.519 | 135 | 50 | 3 | 125 | 254 | 2 | 135 | 1.21e-42 | 143 |
| MS.gene74864.t1 | MTR_1g078460 | 80.460 | 87 | 14 | 1 | 1 | 84 | 64 | 150 | 5.76e-40 | 136 |
| MS.gene74864.t1 | MTR_1g079350 | 62.727 | 110 | 35 | 2 | 1 | 104 | 1 | 110 | 6.97e-37 | 130 |
| MS.gene74864.t1 | MTR_7g096310 | 55.469 | 128 | 53 | 2 | 57 | 182 | 37 | 162 | 2.11e-31 | 115 |
| MS.gene74864.t1 | MTR_2g042540 | 60.952 | 105 | 36 | 3 | 1 | 100 | 1 | 105 | 4.70e-31 | 113 |
| MS.gene74864.t1 | MTR_1g079130 | 39.594 | 197 | 96 | 4 | 98 | 279 | 1 | 189 | 1.16e-30 | 114 |
| MS.gene74864.t1 | MTR_3g058640 | 52.632 | 114 | 40 | 1 | 125 | 238 | 7 | 106 | 3.43e-30 | 110 |
| MS.gene74864.t1 | MTR_7g103380 | 24.055 | 291 | 175 | 9 | 6 | 278 | 21 | 283 | 1.76e-18 | 83.6 |
| MS.gene74864.t1 | MTR_0113s0040 | 29.947 | 187 | 116 | 7 | 2 | 178 | 20 | 201 | 4.37e-18 | 82.4 |
| MS.gene74864.t1 | MTR_5g010800 | 30.055 | 183 | 113 | 7 | 6 | 178 | 19 | 196 | 3.35e-16 | 77.0 |
| MS.gene74864.t1 | MTR_0002s0020 | 29.630 | 189 | 117 | 5 | 3 | 178 | 21 | 206 | 4.16e-16 | 77.0 |
| MS.gene74864.t1 | MTR_1g101390 | 35.461 | 141 | 81 | 5 | 2 | 135 | 26 | 163 | 1.34e-15 | 75.5 |
| MS.gene74864.t1 | MTR_4g102770 | 33.571 | 140 | 86 | 3 | 6 | 139 | 21 | 159 | 1.86e-15 | 75.1 |
| MS.gene74864.t1 | MTR_1g079220 | 44.304 | 79 | 30 | 1 | 162 | 240 | 1 | 65 | 2.70e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74864.t1 | AT1G80110 | 41.727 | 278 | 130 | 8 | 7 | 278 | 4 | 255 | 2.08e-56 | 182 |
| MS.gene74864.t1 | AT2G02360 | 37.011 | 281 | 145 | 8 | 4 | 278 | 14 | 268 | 1.61e-54 | 178 |
| MS.gene74864.t1 | AT2G02230 | 34.062 | 320 | 159 | 9 | 2 | 282 | 30 | 336 | 8.31e-51 | 170 |
| MS.gene74864.t1 | AT2G02340 | 35.889 | 287 | 157 | 8 | 1 | 278 | 33 | 301 | 1.73e-50 | 168 |
| MS.gene74864.t1 | AT1G56240 | 37.324 | 284 | 159 | 9 | 7 | 278 | 4 | 280 | 2.53e-50 | 167 |
| MS.gene74864.t1 | AT2G02250 | 37.143 | 280 | 148 | 8 | 4 | 278 | 47 | 303 | 2.49e-49 | 166 |
| MS.gene74864.t1 | AT2G02240 | 37.276 | 279 | 148 | 7 | 4 | 278 | 61 | 316 | 4.94e-49 | 165 |
| MS.gene74864.t1 | AT1G09155 | 37.413 | 286 | 158 | 9 | 7 | 279 | 3 | 280 | 6.49e-49 | 164 |
| MS.gene74864.t1 | AT1G56250 | 36.364 | 286 | 163 | 9 | 7 | 280 | 4 | 282 | 4.41e-46 | 156 |
| MS.gene74864.t1 | AT2G02350 | 34.507 | 284 | 156 | 9 | 2 | 278 | 22 | 282 | 3.26e-45 | 154 |
| MS.gene74864.t1 | AT2G02310 | 32.270 | 282 | 163 | 7 | 4 | 279 | 45 | 304 | 5.26e-41 | 144 |
| MS.gene74864.t1 | AT2G02320 | 33.569 | 283 | 152 | 9 | 6 | 278 | 42 | 298 | 3.06e-38 | 137 |
| MS.gene74864.t1 | AT2G02300 | 34.965 | 286 | 138 | 12 | 4 | 279 | 34 | 281 | 1.01e-36 | 132 |
| MS.gene74864.t1 | AT5G24560 | 44.286 | 140 | 72 | 2 | 4 | 140 | 3 | 139 | 2.51e-33 | 120 |
| MS.gene74864.t1 | AT3G53000 | 26.408 | 284 | 176 | 10 | 6 | 278 | 23 | 284 | 1.65e-20 | 89.4 |
| MS.gene74864.t1 | AT2G02350 | 31.351 | 185 | 103 | 7 | 98 | 278 | 1 | 165 | 8.35e-18 | 79.3 |
| MS.gene74864.t1 | AT3G61060 | 31.159 | 138 | 89 | 3 | 3 | 135 | 24 | 160 | 2.50e-15 | 74.7 |
| MS.gene74864.t1 | AT3G61060 | 28.986 | 138 | 93 | 2 | 3 | 135 | 24 | 161 | 7.17e-14 | 70.9 |
| MS.gene74864.t1 | AT1G63090 | 30.435 | 161 | 105 | 4 | 6 | 162 | 28 | 185 | 1.90e-13 | 69.3 |
| MS.gene74864.t1 | AT5G52120 | 31.724 | 145 | 87 | 4 | 4 | 137 | 21 | 164 | 3.29e-13 | 68.9 |
| MS.gene74864.t1 | AT1G12710 | 28.022 | 182 | 117 | 6 | 6 | 178 | 30 | 206 | 4.35e-13 | 68.6 |
Find 76 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATCTCTGATGTATAGTT+TGG | 0.223900 | 1.1:+58888411 | None:intergenic |
| TAAGCCGCATACTGAGTATT+TGG | 0.291931 | 1.1:+58888553 | None:intergenic |
| TATAGTTTGGGTTCCATGTT+TGG | 0.302793 | 1.1:+58888424 | None:intergenic |
| TAGAAGCTGGTATCGGGTTC+TGG | 0.318141 | 1.1:-58888392 | MS.gene74864:CDS |
| CAACACTAAAATTGTCTGTT+TGG | 0.330058 | 1.1:-58888449 | MS.gene74864:CDS |
| CTATCTCTGATGTATAGTTT+GGG | 0.338756 | 1.1:+58888412 | None:intergenic |
| TAATATCGAAAACACTCATT+TGG | 0.347949 | 1.1:+58888257 | None:intergenic |
| TGCCAACATTCCAACCAAAA+AGG | 0.353415 | 1.1:-58890509 | MS.gene74864:CDS |
| TGGAGTCGTGCGAGAGAGTA+TGG | 0.361410 | 1.1:+58890645 | None:intergenic |
| CTAGATCTCTCGACATTGCT+TGG | 0.381420 | 1.1:-58889360 | MS.gene74864:CDS |
| TGACCATGATCGATGATGAT+AGG | 0.382423 | 1.1:+58890460 | None:intergenic |
| TAGATCTCTCGACATTGCTT+GGG | 0.382950 | 1.1:-58889359 | MS.gene74864:CDS |
| TGAAATGCAGAGCTTTCAAT+TGG | 0.399907 | 1.1:-58889419 | MS.gene74864:intron |
| AAGGGAAATTTCATTCTTGA+AGG | 0.406217 | 1.1:-58888205 | MS.gene74864:CDS |
| TAAAGGATGCCAACATCAAT+TGG | 0.409523 | 1.1:+58890625 | None:intergenic |
| TATGGTGGCAATACATCCTT+CGG | 0.421429 | 1.1:+58890663 | None:intergenic |
| CAGCCGATTCTGATGATGTC+TGG | 0.421720 | 1.1:-58890585 | MS.gene74864:CDS |
| CTTCGTCTTGTGTGGCTGCT+TGG | 0.423031 | 1.1:-58888610 | MS.gene74864:CDS |
| GACTTATTCGTTGGCATCGA+AGG | 0.426371 | 1.1:-58888481 | MS.gene74864:CDS |
| TTTGGACTTCTTCAACTTGG+AGG | 0.430797 | 1.1:+58888275 | None:intergenic |
| GTTGGCATCGAAGGTGGCCT+TGG | 0.442349 | 1.1:-58888472 | MS.gene74864:CDS |
| GTTGTTTAATTGTCTACCTT+AGG | 0.445337 | 1.1:+58888169 | None:intergenic |
| TGAGAGGATAGATGAGATGT+CGG | 0.448236 | 1.1:+58890546 | None:intergenic |
| GGGTGGTTGGAGATTGAGAT+GGG | 0.452616 | 1.1:-58888316 | MS.gene74864:CDS |
| CAGAGATAGAAGCTGGTATC+GGG | 0.483068 | 1.1:-58888398 | MS.gene74864:CDS |
| ATGATGATCGATATTGCAAC+TGG | 0.484342 | 1.1:-58889333 | MS.gene74864:CDS |
| AGACGAAGATAAGCAACCTC+TGG | 0.486519 | 1.1:+58888625 | None:intergenic |
| CATCATCGATCATGGTCAAA+AGG | 0.487205 | 1.1:-58890455 | MS.gene74864:intron |
| GGATAGATGAGATGTCGGAA+GGG | 0.488384 | 1.1:+58890551 | None:intergenic |
| TCATTTGGACTTCTTCAACT+TGG | 0.489113 | 1.1:+58888272 | None:intergenic |
| TGTGGCTGCTTGGTATTCGT+TGG | 0.489454 | 1.1:-58888600 | MS.gene74864:CDS |
| AGGATAGATGAGATGTCGGA+AGG | 0.493700 | 1.1:+58890550 | None:intergenic |
| ATGGTGGCAATACATCCTTC+GGG | 0.496577 | 1.1:+58890664 | None:intergenic |
| CTTCACGTGGACTTATTCGT+TGG | 0.499768 | 1.1:-58888490 | MS.gene74864:CDS |
| TGGGTGGTTGGAGATTGAGA+TGG | 0.501451 | 1.1:-58888317 | MS.gene74864:CDS |
| CGTCCTATCATCATCGATCA+TGG | 0.502262 | 1.1:-58890463 | MS.gene74864:CDS |
| TTCTTGAAGGAATAGAACTT+AGG | 0.508359 | 1.1:-58888192 | MS.gene74864:CDS |
| TTAAGAGCTAACCTAGCATC+AGG | 0.509911 | 1.1:+58889301 | None:intergenic |
| TCAGAGATAGAAGCTGGTAT+CGG | 0.512473 | 1.1:-58888399 | MS.gene74864:CDS |
| CGCACGACTCCAATTGATGT+TGG | 0.520018 | 1.1:-58890634 | MS.gene74864:CDS |
| ATTCCAGACATCATCAGAAT+CGG | 0.524392 | 1.1:+58890582 | None:intergenic |
| TGTCCTAGTGTGAGAAGTGA+TGG | 0.542547 | 1.1:-58888337 | MS.gene74864:CDS |
| TTCAAGATGATTGATGCCTA+TGG | 0.543793 | 1.1:-58888523 | MS.gene74864:CDS |
| GGATTGTTGTGCCTGATGCT+AGG | 0.545091 | 1.1:-58889312 | MS.gene74864:intron |
| GATGAATGCTGATGAGATGA+AGG | 0.554386 | 1.1:-58888224 | MS.gene74864:CDS |
| TGTGAGAAGTGATGGGTGGT+TGG | 0.556049 | 1.1:-58888329 | MS.gene74864:CDS |
| AGGAATAGAACTTAGGCCTA+AGG | 0.557638 | 1.1:-58888185 | MS.gene74864:CDS |
| TGTCTGTTTGGATCCAAACA+TGG | 0.558541 | 1.1:-58888437 | MS.gene74864:CDS |
| TTGCTTATCTTCGTCTTGTG+TGG | 0.563086 | 1.1:-58888618 | MS.gene74864:CDS |
| TTTCAATTGGATAGAAAGAG+TGG | 0.567809 | 1.1:-58889406 | MS.gene74864:CDS |
| CACCCATCACTTCTCACACT+AGG | 0.570746 | 1.1:+58888334 | None:intergenic |
| TATACATCAGAGATAGAAGC+TGG | 0.573932 | 1.1:-58888405 | MS.gene74864:CDS |
| GACGAAGATAAGCAACCTCT+GGG | 0.577350 | 1.1:+58888626 | None:intergenic |
| TTATTCGTTGGCATCGAAGG+TGG | 0.579416 | 1.1:-58888478 | MS.gene74864:CDS |
| GTGAAGGATCCTACGTCCAT+AGG | 0.585678 | 1.1:+58888507 | None:intergenic |
| CTGGAAGAGTTGAACGACAT+AGG | 0.589320 | 1.1:-58888373 | MS.gene74864:CDS |
| GTGGTTGGAGATTGAGATGG+GGG | 0.596500 | 1.1:-58888314 | MS.gene74864:CDS |
| GAGTATTTGGAGACAAGGCA+AGG | 0.601654 | 1.1:+58888566 | None:intergenic |
| CAAGTGAAGAAGATTGTGAG+AGG | 0.609067 | 1.1:+58890530 | None:intergenic |
| AGATCTCTCGACATTGCTTG+GGG | 0.616050 | 1.1:-58889358 | MS.gene74864:CDS |
| GGTGGTTGGAGATTGAGATG+GGG | 0.619250 | 1.1:-58888315 | MS.gene74864:CDS |
| GTCTCCAAATACTCAGTATG+CGG | 0.620795 | 1.1:-58888557 | MS.gene74864:CDS |
| TGTGTTGGACAGGTTCCCAG+AGG | 0.646237 | 1.1:-58888641 | MS.gene74864:intron |
| ATGAATGCTGATGAGATGAA+GGG | 0.648371 | 1.1:-58888223 | MS.gene74864:CDS |
| ATACTGAGTATTTGGAGACA+AGG | 0.649595 | 1.1:+58888561 | None:intergenic |
| GAGTTGAACGACATAGGTGT+AGG | 0.650211 | 1.1:-58888367 | MS.gene74864:CDS |
| GTCCTAGTGTGAGAAGTGAT+GGG | 0.651378 | 1.1:-58888336 | MS.gene74864:CDS |
| AGTATTTGGAGACAAGGCAA+GGG | 0.666167 | 1.1:+58888567 | None:intergenic |
| CAACGAATAAGTCCACGTGA+AGG | 0.670178 | 1.1:+58888491 | None:intergenic |
| AGCAATGTCGAGAGATCTAG+CGG | 0.671273 | 1.1:+58889363 | None:intergenic |
| AGGTTTGAAGAATTGCCCGA+AGG | 0.679301 | 1.1:-58890679 | MS.gene74864:CDS |
| TGATTGATGCCTATGGACGT+AGG | 0.692744 | 1.1:-58888516 | MS.gene74864:CDS |
| CTAGTGTGAGAAGTGATGGG+TGG | 0.699298 | 1.1:-58888333 | MS.gene74864:CDS |
| TCACTTCTCACACTAGGACA+CGG | 0.699665 | 1.1:+58888340 | None:intergenic |
| TGGACGTAGGATCCTTCACG+TGG | 0.700193 | 1.1:-58888503 | MS.gene74864:CDS |
| AGTCGTGCGAGAGAGTATGG+TGG | 0.768839 | 1.1:+58890648 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAGTTTAATAAAAAACTTA+AGG | - | chr1.1:58889306-58889325 | MS.gene74864:intron | 10.0% |
| !!! | AAAATTTCAGTATTTTAAAA+AGG | + | chr1.1:58889861-58889880 | None:intergenic | 10.0% |
| !!! | TAAGTTTTTTATTAAACTAA+TGG | + | chr1.1:58889306-58889325 | None:intergenic | 10.0% |
| !!! | TTTTTAAAATACTGAAATTT+TGG | - | chr1.1:58889860-58889879 | MS.gene74864:intron | 10.0% |
| !! | ATAAACTGTTAAAATCTAAT+AGG | + | chr1.1:58888855-58888874 | None:intergenic | 15.0% |
| !! | ATGAATTGTAAAATATATGA+GGG | - | chr1.1:58888873-58888892 | MS.gene74864:intron | 15.0% |
| !! | ATTGAAATGAAAAAAGATAA+AGG | - | chr1.1:58888683-58888702 | MS.gene74864:intron | 15.0% |
| !! | CATGATAAAAAAAAAAAAAC+AGG | - | chr1.1:58889705-58889724 | MS.gene74864:intron | 15.0% |
| !! | TATGAATTGTAAAATATATG+AGG | - | chr1.1:58888872-58888891 | MS.gene74864:intron | 15.0% |
| !! | TTATATGCTAATATGAATTA+AGG | + | chr1.1:58888830-58888849 | None:intergenic | 15.0% |
| !!! | ATATATTTTACAATGCATAA+GGG | + | chr1.1:58889071-58889090 | None:intergenic | 15.0% |
| !!! | TATATATTTTACAATGCATA+AGG | + | chr1.1:58889072-58889091 | None:intergenic | 15.0% |
| !!! | TTACTTCAAAATTTTTGTTT+AGG | - | chr1.1:58890096-58890115 | MS.gene74864:intron | 15.0% |
| !! | ACCTAATTATCTACATTTAT+AGG | + | chr1.1:58888772-58888791 | None:intergenic | 20.0% |
| !! | ACTCATATATGAAATATTCA+AGG | + | chr1.1:58889638-58889657 | None:intergenic | 20.0% |
| !! | AGAAATCAGTGATTTATTTA+CGG | + | chr1.1:58888492-58888511 | None:intergenic | 20.0% |
| !! | CCTAATTATCTACATTTATA+GGG | + | chr1.1:58888771-58888790 | None:intergenic | 20.0% |
| !! | TAAAAAAAAAAAAACAGGAG+AGG | - | chr1.1:58889710-58889729 | MS.gene74864:intron | 20.0% |
| !! | TGAATTGTAAAATATATGAG+GGG | - | chr1.1:58888874-58888893 | MS.gene74864:intron | 20.0% |
| !! | TGCATTGTAAAATATATATG+TGG | - | chr1.1:58889074-58889093 | MS.gene74864:intron | 20.0% |
| !!! | TCATTTCAATTTTGTTCTTT+TGG | + | chr1.1:58888673-58888692 | None:intergenic | 20.0% |
| ! | AATGTGGTTTATGTACAAAT+AGG | + | chr1.1:58889944-58889963 | None:intergenic | 25.0% |
| ! | AGAGATTATAACATCACAAA+TGG | + | chr1.1:58890153-58890172 | None:intergenic | 25.0% |
| ! | AGATTATAACATCACAAATG+GGG | + | chr1.1:58890151-58890170 | None:intergenic | 25.0% |
| ! | ATGTGGTTTATGTACAAATA+GGG | + | chr1.1:58889943-58889962 | None:intergenic | 25.0% |
| ! | CAGATCGAAAAATCTTATAA+AGG | + | chr1.1:58888254-58888273 | None:intergenic | 25.0% |
| ! | CCCTATAAATGTAGATAATT+AGG | - | chr1.1:58888768-58888787 | MS.gene74864:intron | 25.0% |
| ! | CTAAATTTATCATGAGTTAG+TGG | + | chr1.1:58889806-58889825 | None:intergenic | 25.0% |
| ! | GAGATTATAACATCACAAAT+GGG | + | chr1.1:58890152-58890171 | None:intergenic | 25.0% |
| ! | TAATATCGAAAACACTCATT+TGG | + | chr1.1:58890605-58890624 | None:intergenic | 25.0% |
| ! | TATATATGTGGAAGAAACTA+TGG | - | chr1.1:58889250-58889269 | MS.gene74864:intron | 25.0% |
| ! | TGTAAGTGTTATAGTTTACT+AGG | + | chr1.1:58889838-58889857 | None:intergenic | 25.0% |
| ! | TTAGGGTTTATCATCATATT+AGG | - | chr1.1:58888518-58888537 | MS.gene74864:CDS | 25.0% |
| !! | AATGAGTGTTTTCGATATTA+AGG | - | chr1.1:58890605-58890624 | MS.gene74864:CDS | 25.0% |
| !! | ATTTCTGTAACATTTTGTGT+TGG | - | chr1.1:58890203-58890222 | MS.gene74864:intron | 25.0% |
| !! | GTCATCTGAAATTAAGTTAA+TGG | - | chr1.1:58888714-58888733 | MS.gene74864:intron | 25.0% |
| !!! | CACTGATTTCTTGAATATTA+GGG | - | chr1.1:58888444-58888463 | MS.gene74864:CDS | 25.0% |
| !!! | TCACTGATTTCTTGAATATT+AGG | - | chr1.1:58888443-58888462 | MS.gene74864:CDS | 25.0% |
| AACTCATGATAAATTTAGCC+CGG | - | chr1.1:58889808-58889827 | MS.gene74864:intron | 30.0% | |
| AAGGGAAATTTCATTCTTGA+AGG | - | chr1.1:58890654-58890673 | MS.gene74864:CDS | 30.0% | |
| ACATATGCAAATGGATCAAA+AGG | + | chr1.1:58888589-58888608 | None:intergenic | 30.0% | |
| ATAGTTGAAAGTTTCCTTGA+TGG | + | chr1.1:58889684-58889703 | None:intergenic | 30.0% | |
| CAACACTAAAATTGTCTGTT+TGG | - | chr1.1:58890410-58890429 | MS.gene74864:intron | 30.0% | |
| CATCATATTAGGTAAGAGTT+TGG | - | chr1.1:58888529-58888548 | MS.gene74864:CDS | 30.0% | |
| CTATCTCTGATGTATAGTTT+GGG | + | chr1.1:58890450-58890469 | None:intergenic | 30.0% | |
| TAGATGCAAACATATGCAAA+TGG | + | chr1.1:58888598-58888617 | None:intergenic | 30.0% | |
| TATATATGTGGAAGAAACTC+TGG | - | chr1.1:58889086-58889105 | MS.gene74864:intron | 30.0% | |
| TCTATCTCTGATGTATAGTT+TGG | + | chr1.1:58890451-58890470 | None:intergenic | 30.0% | |
| TTCTTGAAGGAATAGAACTT+AGG | - | chr1.1:58890667-58890686 | MS.gene74864:CDS | 30.0% | |
| TTGTGTAAAAAAACAGGGTA+AGG | - | chr1.1:58888971-58888990 | MS.gene74864:intron | 30.0% | |
| TTTCAATTGGATAGAAAGAG+TGG | - | chr1.1:58889453-58889472 | MS.gene74864:intron | 30.0% | |
| ! | ATTTAAGGCAATACATCAAG+TGG | - | chr1.1:58889157-58889176 | MS.gene74864:intron | 30.0% |
| !! | CACTGATTTCTCGAATATTA+GGG | - | chr1.1:58888501-58888520 | MS.gene74864:CDS | 30.0% |
| !! | TCACTGATTTCTCGAATATT+AGG | - | chr1.1:58888500-58888519 | MS.gene74864:CDS | 30.0% |
| AAATATATGAGGGGTAACCT+TGG | - | chr1.1:58888883-58888902 | MS.gene74864:intron | 35.0% | |
| ACAAAAAGCCTTCTTGGTAT+GGG | + | chr1.1:58889745-58889764 | None:intergenic | 35.0% | |
| AGCCTCTTGTGTAAAAAAAC+AGG | - | chr1.1:58888965-58888984 | MS.gene74864:intron | 35.0% | |
| ATACTGAGTATTTGGAGACA+AGG | + | chr1.1:58890301-58890320 | None:intergenic | 35.0% | |
| ATGAATGCTGATGAGATGAA+GGG | - | chr1.1:58890636-58890655 | MS.gene74864:CDS | 35.0% | |
| ATGATGATCGATATTGCAAC+TGG | - | chr1.1:58889526-58889545 | MS.gene74864:intron | 35.0% | |
| ATTCCAGACATCATCAGAAT+CGG | + | chr1.1:58888280-58888299 | None:intergenic | 35.0% | |
| CGTATAATACATCAAGTGGT+GGG | - | chr1.1:58888997-58889016 | MS.gene74864:intron | 35.0% | |
| GAAATATTCAAGGATTGACG+AGG | + | chr1.1:58889628-58889647 | None:intergenic | 35.0% | |
| GAACGGAGTTATCATTATCT+TGG | - | chr1.1:58890016-58890035 | MS.gene74864:intron | 35.0% | |
| GCCTCTTGTGTAAAAAAACA+GGG | - | chr1.1:58888966-58888985 | MS.gene74864:intron | 35.0% | |
| GTATAATACATCAAGTGGTG+GGG | - | chr1.1:58888998-58889017 | MS.gene74864:intron | 35.0% | |
| GTTGCGTATAATACATCAAG+TGG | - | chr1.1:58888993-58889012 | MS.gene74864:intron | 35.0% | |
| TAAAGGATGCCAACATCAAT+TGG | + | chr1.1:58888237-58888256 | None:intergenic | 35.0% | |
| TATACATCAGAGATAGAAGC+TGG | - | chr1.1:58890454-58890473 | MS.gene74864:intron | 35.0% | |
| TCATTTGGACTTCTTCAACT+TGG | + | chr1.1:58890590-58890609 | None:intergenic | 35.0% | |
| TGAAATGCAGAGCTTTCAAT+TGG | - | chr1.1:58889440-58889459 | MS.gene74864:intron | 35.0% | |
| TTAGTTGTGTTGAAATGTCC+TGG | + | chr1.1:58889903-58889922 | None:intergenic | 35.0% | |
| TTATAGTTTACTAGGCTTGC+CGG | + | chr1.1:58889830-58889849 | None:intergenic | 35.0% | |
| TTCAAGATGATTGATGCCTA+TGG | - | chr1.1:58890336-58890355 | MS.gene74864:intron | 35.0% | |
| TTGAAAGTTTCCTTGATGGA+GGG | + | chr1.1:58889680-58889699 | None:intergenic | 35.0% | |
| ! | AGTGTTTTCGATATTAAGGC+TGG | - | chr1.1:58890609-58890628 | MS.gene74864:CDS | 35.0% |
| ! | CACAAATGGGGTATTTAGAT+GGG | + | chr1.1:58890139-58890158 | None:intergenic | 35.0% |
| ! | TATAGTTTGGGTTCCATGTT+TGG | + | chr1.1:58890438-58890457 | None:intergenic | 35.0% |
| ! | TCACAAATGGGGTATTTAGA+TGG | + | chr1.1:58890140-58890159 | None:intergenic | 35.0% |
| ! | TGTAACATTTTGTGTTGGAC+AGG | - | chr1.1:58890208-58890227 | MS.gene74864:intron | 35.0% |
| !! | AGACAATTTTAGTGTTGCCA+AGG | + | chr1.1:58890407-58890426 | None:intergenic | 35.0% |
| !! | ATGGGGGAGTTTTTCAATTT+AGG | - | chr1.1:58890561-58890580 | MS.gene74864:CDS | 35.0% |
| !! | TAAAGTTGATGTCATGTGAC+TGG | - | chr1.1:58888915-58888934 | MS.gene74864:intron | 35.0% |
| !!! | ACCCTGTTTTTTTACACAAG+AGG | + | chr1.1:58888970-58888989 | None:intergenic | 35.0% |
| AAGGCAATACATCAAGTGGT+GGG | - | chr1.1:58889161-58889180 | MS.gene74864:intron | 40.0% | |
| ACCACATTATCTCTTCGTTG+TGG | - | chr1.1:58889956-58889975 | MS.gene74864:intron | 40.0% | |
| AGGAATAGAACTTAGGCCTA+AGG | - | chr1.1:58890674-58890693 | MS.gene74864:CDS | 40.0% | |
| AGTATTTGGAGACAAGGCAA+GGG | + | chr1.1:58890295-58890314 | None:intergenic | 40.0% | |
| CAAGTGAAGAAGATTGTGAG+AGG | + | chr1.1:58888332-58888351 | None:intergenic | 40.0% | |
| CATCATCGATCATGGTCAAA+AGG | - | chr1.1:58888404-58888423 | MS.gene74864:CDS | 40.0% | |
| CGGAGTTATCATTATCTTGG+AGG | - | chr1.1:58890019-58890038 | MS.gene74864:intron | 40.0% | |
| GACAAAAAGCCTTCTTGGTA+TGG | + | chr1.1:58889746-58889765 | None:intergenic | 40.0% | |
| GATGAATGCTGATGAGATGA+AGG | - | chr1.1:58890635-58890654 | MS.gene74864:CDS | 40.0% | |
| GCGTATAATACATCAAGTGG+TGG | - | chr1.1:58888996-58889015 | MS.gene74864:intron | 40.0% | |
| GTCTCCAAATACTCAGTATG+CGG | - | chr1.1:58890302-58890321 | MS.gene74864:intron | 40.0% | |
| GTTGAAAGTTTCCTTGATGG+AGG | + | chr1.1:58889681-58889700 | None:intergenic | 40.0% | |
| TAAGCCGCATACTGAGTATT+TGG | + | chr1.1:58890309-58890328 | None:intergenic | 40.0% | |
| TAAGGCAATACATCAAGTGG+TGG | - | chr1.1:58889160-58889179 | MS.gene74864:intron | 40.0% | |
| TAGATCTCTCGACATTGCTT+GGG | - | chr1.1:58889500-58889519 | MS.gene74864:intron | 40.0% | |
| TATAGTTTACTAGGCTTGCC+GGG | + | chr1.1:58889829-58889848 | None:intergenic | 40.0% | |
| TATGGTGGCAATACATCCTT+CGG | + | chr1.1:58888199-58888218 | None:intergenic | 40.0% | |
| TCAGAGATAGAAGCTGGTAT+CGG | - | chr1.1:58890460-58890479 | MS.gene74864:CDS | 40.0% | |
| TGACCATGATCGATGATGAT+AGG | + | chr1.1:58888402-58888421 | None:intergenic | 40.0% | |
| TGAGAGGATAGATGAGATGT+CGG | + | chr1.1:58888316-58888335 | None:intergenic | 40.0% | |
| TGCCAACATTCCAACCAAAA+AGG | - | chr1.1:58888350-58888369 | MS.gene74864:CDS | 40.0% | |
| TGTCTGTTTGGATCCAAACA+TGG | - | chr1.1:58890422-58890441 | MS.gene74864:intron | 40.0% | |
| TTAAGAGCTAACCTAGCATC+AGG | + | chr1.1:58889561-58889580 | None:intergenic | 40.0% | |
| TTGCTTATCTTCGTCTTGTG+TGG | - | chr1.1:58890241-58890260 | MS.gene74864:intron | 40.0% | |
| TTTGGACTTCTTCAACTTGG+AGG | + | chr1.1:58890587-58890606 | None:intergenic | 40.0% | |
| !! | AGATAGAGAGCCTTTTTGGT+TGG | + | chr1.1:58888363-58888382 | None:intergenic | 40.0% |
| !!! | AGCCTTTTTGGTTGGAATGT+TGG | + | chr1.1:58888355-58888374 | None:intergenic | 40.0% |
| AGACGAAGATAAGCAACCTC+TGG | + | chr1.1:58890237-58890256 | None:intergenic | 45.0% | |
| AGATCTCTCGACATTGCTTG+GGG | - | chr1.1:58889501-58889520 | MS.gene74864:intron | 45.0% | |
| AGCAATGTCGAGAGATCTAG+CGG | + | chr1.1:58889499-58889518 | None:intergenic | 45.0% | |
| AGGATAGATGAGATGTCGGA+AGG | + | chr1.1:58888312-58888331 | None:intergenic | 45.0% | |
| AGGCAATACATCAAGTGGTG+GGG | - | chr1.1:58889162-58889181 | MS.gene74864:intron | 45.0% | |
| AGGTTTGAAGAATTGCCCGA+AGG | - | chr1.1:58888180-58888199 | MS.gene74864:CDS | 45.0% | |
| ATGGTGGCAATACATCCTTC+GGG | + | chr1.1:58888198-58888217 | None:intergenic | 45.0% | |
| CAACGAATAAGTCCACGTGA+AGG | + | chr1.1:58890371-58890390 | None:intergenic | 45.0% | |
| CAGAGATAGAAGCTGGTATC+GGG | - | chr1.1:58890461-58890480 | MS.gene74864:CDS | 45.0% | |
| CGAATATGCCCATACCAAGA+AGG | - | chr1.1:58889734-58889753 | MS.gene74864:intron | 45.0% | |
| CGTCCTATCATCATCGATCA+TGG | - | chr1.1:58888396-58888415 | MS.gene74864:CDS | 45.0% | |
| CTAGATCTCTCGACATTGCT+TGG | - | chr1.1:58889499-58889518 | MS.gene74864:intron | 45.0% | |
| CTGGAAGAGTTGAACGACAT+AGG | - | chr1.1:58890486-58890505 | MS.gene74864:CDS | 45.0% | |
| CTTCACGTGGACTTATTCGT+TGG | - | chr1.1:58890369-58890388 | MS.gene74864:intron | 45.0% | |
| GACGAAGATAAGCAACCTCT+GGG | + | chr1.1:58890236-58890255 | None:intergenic | 45.0% | |
| GAGTATTTGGAGACAAGGCA+AGG | + | chr1.1:58890296-58890315 | None:intergenic | 45.0% | |
| GAGTTGAACGACATAGGTGT+AGG | - | chr1.1:58890492-58890511 | MS.gene74864:CDS | 45.0% | |
| GCCACAACGAAGAGATAATG+TGG | + | chr1.1:58889960-58889979 | None:intergenic | 45.0% | |
| GGATAGATGAGATGTCGGAA+GGG | + | chr1.1:58888311-58888330 | None:intergenic | 45.0% | |
| GTAATGACTCACACACTTCC+AGG | - | chr1.1:58889882-58889901 | MS.gene74864:intron | 45.0% | |
| GTCCTAGTGTGAGAAGTGAT+GGG | - | chr1.1:58890523-58890542 | MS.gene74864:CDS | 45.0% | |
| GTCGTGACAAAAAGCCTTCT+TGG | + | chr1.1:58889751-58889770 | None:intergenic | 45.0% | |
| GTTGATGTCATGTGACTGGA+AGG | - | chr1.1:58888919-58888938 | MS.gene74864:intron | 45.0% | |
| GTTTCCTTGATGGAGGGAAT+AGG | + | chr1.1:58889674-58889693 | None:intergenic | 45.0% | |
| TACAATGCATAAGGGCAACC+CGG | + | chr1.1:58889063-58889082 | None:intergenic | 45.0% | |
| TATCTCTTCGTTGTGGCGAA+CGG | - | chr1.1:58889999-58890018 | MS.gene74864:intron | 45.0% | |
| TATCTCTTCGTTGTGGCGAT+CGG | - | chr1.1:58889963-58889982 | MS.gene74864:intron | 45.0% | |
| TCACTTCTCACACTAGGACA+CGG | + | chr1.1:58890522-58890541 | None:intergenic | 45.0% | |
| TGATCCTATTCCCTCCATCA+AGG | - | chr1.1:58889667-58889686 | MS.gene74864:intron | 45.0% | |
| TGATTGATGCCTATGGACGT+AGG | - | chr1.1:58890343-58890362 | MS.gene74864:intron | 45.0% | |
| TGTCCTAGTGTGAGAAGTGA+TGG | - | chr1.1:58890522-58890541 | MS.gene74864:CDS | 45.0% | |
| ! | AGCGAGATAGAGAGCCTTTT+TGG | + | chr1.1:58888367-58888386 | None:intergenic | 45.0% |
| ! | GACTTATTCGTTGGCATCGA+AGG | - | chr1.1:58890378-58890397 | MS.gene74864:intron | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr1.1:58888959-58888978 | None:intergenic | 45.0% |
| ! | TTATTCGTTGGCATCGAAGG+TGG | - | chr1.1:58890381-58890400 | MS.gene74864:intron | 45.0% |
| !! | TTAGTTTAATAAAAAATTTA+AGG | - | chr1.1:58889142-58889161 | MS.gene74864:intron | 5.0% |
| !!! | TAAATTTTTTATTAAACTAA+TGG | + | chr1.1:58889142-58889161 | None:intergenic | 5.0% |
| CACCCATCACTTCTCACACT+AGG | + | chr1.1:58890528-58890547 | None:intergenic | 50.0% | |
| CGCACGACTCCAATTGATGT+TGG | - | chr1.1:58888225-58888244 | MS.gene74864:CDS | 50.0% | |
| GGATTGTTGTGCCTGATGCT+AGG | - | chr1.1:58889547-58889566 | MS.gene74864:intron | 50.0% | |
| GGGTGGTTGGAGATTGAGAT+GGG | - | chr1.1:58890543-58890562 | MS.gene74864:CDS | 50.0% | |
| GGTGGTTGGAGATTGAGATG+GGG | - | chr1.1:58890544-58890563 | MS.gene74864:CDS | 50.0% | |
| GTCATGTGACTGGAAGGTCA+CGG | - | chr1.1:58888925-58888944 | MS.gene74864:intron | 50.0% | |
| GTGAAGGATCCTACGTCCAT+AGG | + | chr1.1:58890355-58890374 | None:intergenic | 50.0% | |
| GTGGTTGGAGATTGAGATGG+GGG | - | chr1.1:58890545-58890564 | MS.gene74864:CDS | 50.0% | |
| TCATGTGACTGGAAGGTCAC+GGG | - | chr1.1:58888926-58888945 | MS.gene74864:intron | 50.0% | |
| TGGGTGGTTGGAGATTGAGA+TGG | - | chr1.1:58890542-58890561 | MS.gene74864:CDS | 50.0% | |
| TGTGGCTGCTTGGTATTCGT+TGG | - | chr1.1:58890259-58890278 | MS.gene74864:intron | 50.0% | |
| ! | ACCCACCTTTTAGCCATGAC+CGG | - | chr1.1:58889769-58889788 | MS.gene74864:intron | 50.0% |
| ! | CAGCCGATTCTGATGATGTC+TGG | - | chr1.1:58888274-58888293 | MS.gene74864:CDS | 50.0% |
| ! | CTAGTGTGAGAAGTGATGGG+TGG | - | chr1.1:58890526-58890545 | MS.gene74864:CDS | 50.0% |
| ! | TAGAAGCTGGTATCGGGTTC+TGG | - | chr1.1:58890467-58890486 | MS.gene74864:CDS | 50.0% |
| !! | TGTGAGAAGTGATGGGTGGT+TGG | - | chr1.1:58890530-58890549 | MS.gene74864:CDS | 50.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr1.1:58888938-58888957 | MS.gene74864:intron | 55.0% | |
| ACTAAAGCCCCCGTATACGC+AGG | + | chr1.1:58889201-58889220 | None:intergenic | 55.0% | |
| CAACTTTACCAGCTGCGCCA+AGG | + | chr1.1:58888903-58888922 | None:intergenic | 55.0% | |
| CTAAAGCCCCCGTATACGCA+GGG | + | chr1.1:58889200-58889219 | None:intergenic | 55.0% | |
| CTTCGTCTTGTGTGGCTGCT+TGG | - | chr1.1:58890249-58890268 | MS.gene74864:intron | 55.0% | |
| GCCGGTCATGGCTAAAAGGT+GGG | + | chr1.1:58889773-58889792 | None:intergenic | 55.0% | |
| TGGACGTAGGATCCTTCACG+TGG | - | chr1.1:58890356-58890375 | MS.gene74864:intron | 55.0% | |
| TGGAGTCGTGCGAGAGAGTA+TGG | + | chr1.1:58888217-58888236 | None:intergenic | 55.0% | |
| TGTGTTGGACAGGTTCCCAG+AGG | - | chr1.1:58890218-58890237 | MS.gene74864:intron | 55.0% | |
| ! | AGTCGTGCGAGAGAGTATGG+TGG | + | chr1.1:58888214-58888233 | None:intergenic | 55.0% |
| ! | ATACGGGGGCTTTAGTGCAC+CGG | - | chr1.1:58889205-58889224 | MS.gene74864:intron | 55.0% |
| CGCCGGTCATGGCTAAAAGG+TGG | + | chr1.1:58889774-58889793 | None:intergenic | 60.0% | |
| CTAAAGCCCCCGCATACGCA+GGG | + | chr1.1:58889036-58889055 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCGTATA+CGG | - | chr1.1:58889188-58889207 | MS.gene74864:intron | 60.0% | |
| GTATACGCAGGGTCCGGGAA+GGG | + | chr1.1:58889189-58889208 | None:intergenic | 60.0% | |
| GTTAGTGGTAGCCTGTGCGC+CGG | + | chr1.1:58889791-58889810 | None:intergenic | 60.0% | |
| TATACGCAGGGTCCGGGAAG+GGG | + | chr1.1:58889188-58889207 | None:intergenic | 60.0% | |
| TTCCCGGACCCTGCGTATAC+GGG | - | chr1.1:58889189-58889208 | MS.gene74864:intron | 60.0% | |
| TTTAGCCATGACCGGCGCAC+AGG | - | chr1.1:58889777-58889796 | MS.gene74864:intron | 60.0% | |
| ! | ATGCGGGGGCTTTAGCGCAT+CGG | - | chr1.1:58889041-58889060 | MS.gene74864:intron | 60.0% |
| ! | GTGCGCCGGTCATGGCTAAA+AGG | + | chr1.1:58889777-58889796 | None:intergenic | 60.0% |
| ! | GTTGGCATCGAAGGTGGCCT+TGG | - | chr1.1:58890387-58890406 | MS.gene74864:intron | 60.0% |
| ! | TACGGGGGCTTTAGTGCACC+GGG | - | chr1.1:58889206-58889225 | MS.gene74864:intron | 60.0% |
| AGGGGTAACCTTGGCGCAGC+TGG | - | chr1.1:58888892-58888911 | MS.gene74864:intron | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | + | chr1.1:58889024-58889043 | None:intergenic | 65.0% | |
| CGTATACGCAGGGTCCGGGA+AGG | + | chr1.1:58889190-58889209 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | - | chr1.1:58889024-58889043 | MS.gene74864:intron | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | chr1.1:58889025-58889044 | None:intergenic | 65.0% | |
| GCTAAAGCCCCCGCATACGC+AGG | + | chr1.1:58889037-58889056 | None:intergenic | 65.0% | |
| TCCCGGACCCTGCGTATACG+GGG | - | chr1.1:58889190-58889209 | MS.gene74864:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | - | chr1.1:58889025-58889044 | MS.gene74864:intron | 65.0% | |
| ! | TGCGGGGGCTTTAGCGCATC+GGG | - | chr1.1:58889042-58889061 | MS.gene74864:intron | 65.0% |
| CCCCCGTATACGCAGGGTCC+GGG | + | chr1.1:58889194-58889213 | None:intergenic | 70.0% | |
| CCCGGACCCTGCGTATACGG+GGG | - | chr1.1:58889191-58889210 | MS.gene74864:intron | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | + | chr1.1:58889026-58889045 | None:intergenic | 70.0% | |
| GCCCCCGTATACGCAGGGTC+CGG | + | chr1.1:58889195-58889214 | None:intergenic | 70.0% | |
| TCCCGGACCCTGCGTATGCG+GGG | - | chr1.1:58889026-58889045 | MS.gene74864:intron | 70.0% | |
| ! | CAAGTGGTGGGGCCCCTTCC+CGG | - | chr1.1:58889009-58889028 | MS.gene74864:intron | 70.0% |
| ! | GGTAGCCTGTGCGCCGGTCA+TGG | + | chr1.1:58889785-58889804 | None:intergenic | 70.0% |
| CCCCCGCATACGCAGGGTCC+GGG | + | chr1.1:58889030-58889049 | None:intergenic | 75.0% | |
| CCCGGACCCTGCGTATGCGG+GGG | - | chr1.1:58889027-58889046 | MS.gene74864:intron | 75.0% | |
| GCCCCCGCATACGCAGGGTC+CGG | + | chr1.1:58889031-58889050 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 58888174 | 58890707 | 58888174 | ID=MS.gene74864 |
| chr1.1 | mRNA | 58888174 | 58890707 | 58888174 | ID=MS.gene74864.t1;Parent=MS.gene74864 |
| chr1.1 | exon | 58890456 | 58890707 | 58890456 | ID=MS.gene74864.t1.exon1;Parent=MS.gene74864.t1 |
| chr1.1 | CDS | 58890456 | 58890707 | 58890456 | ID=cds.MS.gene74864.t1;Parent=MS.gene74864.t1 |
| chr1.1 | exon | 58889313 | 58889431 | 58889313 | ID=MS.gene74864.t1.exon2;Parent=MS.gene74864.t1 |
| chr1.1 | CDS | 58889313 | 58889431 | 58889313 | ID=cds.MS.gene74864.t1;Parent=MS.gene74864.t1 |
| chr1.1 | exon | 58888174 | 58888651 | 58888174 | ID=MS.gene74864.t1.exon3;Parent=MS.gene74864.t1 |
| chr1.1 | CDS | 58888174 | 58888651 | 58888174 | ID=cds.MS.gene74864.t1;Parent=MS.gene74864.t1 |
| Gene Sequence |
| Protein sequence |
