AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene74913

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74913.t1 MTR_1g079180 67.424 264 69 4 1 264 1 247 9.36e-118 348
MS.gene74913.t1 MTR_1g079180 62.162 222 68 4 292 498 19 239 5.96e-79 248
MS.gene74913.t1 MTR_1g079850 65.201 273 88 3 1 273 1 266 6.68e-115 342
MS.gene74913.t1 MTR_1g079850 60.163 246 71 2 291 509 18 263 4.86e-92 283
MS.gene74913.t1 MTR_1g079200 63.534 266 73 4 1 264 1 244 2.96e-107 321
MS.gene74913.t1 MTR_1g079200 57.384 237 73 5 292 509 19 246 8.04e-75 238
MS.gene74913.t1 MTR_1g100597 60.702 285 99 6 1 284 1 273 1.91e-105 317
MS.gene74913.t1 MTR_1g100597 57.083 240 67 7 292 504 19 249 1.70e-71 229
MS.gene74913.t1 MTR_1g079380 62.879 264 79 3 1 264 1 245 3.76e-105 317
MS.gene74913.t1 MTR_1g079380 53.017 232 90 3 292 508 19 246 2.43e-65 214
MS.gene74913.t1 MTR_1g079370 62.879 264 79 4 1 264 1 245 4.43e-104 313
MS.gene74913.t1 MTR_1g079370 58.696 230 76 5 292 506 19 244 1.80e-76 242
MS.gene74913.t1 MTR_1g079230 57.785 289 102 6 1 284 1 274 6.88e-102 308
MS.gene74913.t1 MTR_1g079230 52.301 239 80 5 292 504 19 249 1.21e-65 214
MS.gene74913.t1 MTR_1g079460 62.214 262 81 4 1 262 1 244 1.16e-101 307
MS.gene74913.t1 MTR_1g079460 58.261 230 82 4 292 508 19 247 2.41e-73 234
MS.gene74913.t1 MTR_1g079250 63.534 266 84 6 1 263 1 256 4.68e-100 304
MS.gene74913.t1 MTR_1g079250 56.118 237 79 5 292 504 19 254 3.87e-70 227
MS.gene74913.t1 MTR_1g100613 65.714 245 76 5 20 264 5 241 1.11e-98 298
MS.gene74913.t1 MTR_1g100613 54.545 242 72 5 293 504 5 238 3.20e-69 223
MS.gene74913.t1 MTR_1g079260 59.696 263 92 6 1 262 1 250 1.20e-94 289
MS.gene74913.t1 MTR_1g079260 55.319 235 79 4 292 504 19 249 4.58e-70 226
MS.gene74913.t1 MTR_1g026510 56.089 271 101 7 1 263 1 261 4.56e-91 281
MS.gene74913.t1 MTR_1g026510 53.600 250 82 8 284 504 15 259 1.12e-69 226
MS.gene74913.t1 MTR_3g452600 53.047 279 105 5 4 280 10 264 2.22e-85 265
MS.gene74913.t1 MTR_3g452600 55.947 227 81 4 291 504 24 244 1.96e-69 224
MS.gene74913.t1 MTR_3g006850 54.417 283 102 5 4 264 17 294 4.64e-85 266
MS.gene74913.t1 MTR_3g006850 49.425 261 83 5 292 504 32 291 1.65e-63 210
MS.gene74913.t1 MTR_2g079100 54.480 279 95 7 7 281 12 262 4.50e-84 262
MS.gene74913.t1 MTR_2g079100 52.790 233 75 6 292 504 24 241 5.62e-59 197
MS.gene74913.t1 MTR_1g079350 53.704 270 101 7 1 263 1 253 3.49e-78 247
MS.gene74913.t1 MTR_1g079350 51.282 234 92 6 292 504 19 251 3.13e-57 192
MS.gene74913.t1 MTR_3g450990 50.719 278 96 6 4 264 10 263 1.09e-74 238
MS.gene74913.t1 MTR_3g450990 52.263 243 81 6 291 504 24 260 5.67e-62 205
MS.gene74913.t1 MTR_1g079410 46.831 284 127 5 2 280 6 270 2.20e-73 234
MS.gene74913.t1 MTR_1g079410 47.619 231 99 6 292 503 23 250 1.26e-50 175
MS.gene74913.t1 MTR_7g096300 52.788 269 95 6 1 264 1 242 4.97e-73 246
MS.gene74913.t1 MTR_7g096300 51.948 231 83 7 292 504 19 239 2.66e-50 184
MS.gene74913.t1 MTR_1g079340 52.381 273 109 6 1 262 40 302 6.26e-71 229
MS.gene74913.t1 MTR_1g079340 45.833 264 100 9 292 522 58 311 1.41e-50 176
MS.gene74913.t1 MTR_1g078470 61.905 168 46 3 97 264 17 166 3.18e-61 199
MS.gene74913.t1 MTR_1g078470 47.297 148 56 5 374 504 21 163 9.71e-30 115
MS.gene74913.t1 MTR_1g079140 43.214 280 138 6 2 264 11 286 4.42e-60 201
MS.gene74913.t1 MTR_1g079140 41.221 262 93 10 292 501 28 280 3.90e-42 153
MS.gene74913.t1 MTR_7g112550 41.958 286 149 9 2 280 5 280 5.21e-58 194
MS.gene74913.t1 MTR_7g112550 36.667 240 104 10 292 493 22 251 7.44e-32 124
MS.gene74913.t1 MTR_1g079400 41.288 264 130 5 7 264 15 259 2.42e-50 174
MS.gene74913.t1 MTR_1g079400 39.271 247 99 7 292 504 27 256 1.09e-37 140
MS.gene74913.t1 MTR_1g083580 35.915 284 166 8 2 280 6 278 2.26e-49 172
MS.gene74913.t1 MTR_1g083580 35.537 242 122 8 292 504 23 259 5.30e-32 124
MS.gene74913.t1 MTR_1g079240 55.172 174 54 4 91 264 12 161 7.30e-49 167
MS.gene74913.t1 MTR_1g079240 51.408 142 62 3 364 498 12 153 1.09e-31 120
MS.gene74913.t1 MTR_2g042540 68.103 116 34 2 1 116 1 113 2.66e-43 150
MS.gene74913.t1 MTR_2g042540 70.455 88 24 1 293 380 20 105 2.70e-31 118
MS.gene74913.t1 MTR_1g076870 56.115 139 53 3 133 266 2 137 1.89e-42 148
MS.gene74913.t1 MTR_1g076870 43.511 131 43 3 405 504 2 132 6.60e-23 95.1
MS.gene74913.t1 MTR_1g079350 58.993 139 45 4 1 133 1 133 3.69e-39 142
MS.gene74913.t1 MTR_1g079350 71.579 95 26 1 292 386 19 112 5.46e-34 128
MS.gene74913.t1 MTR_1g079210 56.349 126 51 2 134 258 7 129 6.46e-36 130
MS.gene74913.t1 MTR_1g079210 40.625 128 41 4 406 502 7 130 2.65e-17 79.0
MS.gene74913.t1 MTR_7g112560 32.740 281 162 9 7 285 4 259 8.53e-35 132
MS.gene74913.t1 MTR_7g112560 30.833 240 142 7 292 517 16 245 5.01e-23 99.0
MS.gene74913.t1 MTR_7g096310 47.561 164 65 5 38 187 3 159 1.79e-30 117
MS.gene74913.t1 MTR_7g096310 48.438 128 59 4 327 449 25 150 3.24e-19 85.5
MS.gene74913.t1 MTR_4g023570 30.249 281 149 7 7 285 4 239 4.56e-29 115
MS.gene74913.t1 MTR_4g023570 34.579 214 122 6 292 503 16 213 1.08e-25 105
MS.gene74913.t1 MTR_1g079130 42.197 173 83 5 105 264 1 169 6.94e-29 113
MS.gene74913.t1 MTR_3g058640 50.000 116 42 1 133 248 7 106 6.49e-28 107
MS.gene74913.t1 MTR_3g058640 50.000 100 37 2 405 491 7 106 1.03e-20 87.8
MS.gene74913.t1 MTR_1g078460 61.702 94 32 2 1 94 64 153 1.62e-25 102
MS.gene74913.t1 MTR_1g078460 60.494 81 24 3 284 364 78 150 4.55e-18 81.6
MS.gene74913.t1 MTR_1g079220 59.259 81 17 1 170 250 1 65 2.38e-24 97.1
MS.gene74913.t1 MTR_7g103380 31.724 145 95 3 7 151 22 162 2.82e-18 85.9
MS.gene74913.t1 MTR_0113s0040 29.586 169 113 4 2 170 20 182 1.11e-17 84.0
MS.gene74913.t1 MTR_5g010800 30.612 147 96 3 6 151 19 160 4.88e-16 79.0
MS.gene74913.t1 MTR_0002s0020 29.143 175 109 5 3 170 21 187 4.99e-16 79.0
MS.gene74913.t1 MTR_1g101390 31.373 153 97 4 2 152 26 172 7.00e-16 78.6
MS.gene74913.t1 MTR_4g102770 30.000 150 96 4 6 152 21 164 1.04e-13 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74913.t1 AT2G02360 40.602 266 127 7 2 264 12 249 6.67e-54 183
MS.gene74913.t1 AT2G02360 37.264 212 116 5 292 493 29 233 6.36e-33 127
MS.gene74913.t1 AT1G80110 42.146 261 124 8 5 264 2 236 8.89e-54 182
MS.gene74913.t1 AT1G80110 39.485 233 106 10 292 504 16 233 1.03e-37 139
MS.gene74913.t1 AT2G02240 37.358 265 138 7 2 264 59 297 2.07e-47 167
MS.gene74913.t1 AT2G02240 36.406 217 115 7 292 493 76 284 3.81e-29 117
MS.gene74913.t1 AT2G02250 37.349 249 130 7 4 250 47 271 4.94e-46 164
MS.gene74913.t1 AT2G02250 34.703 219 117 6 292 493 62 271 1.86e-31 124
MS.gene74913.t1 AT2G02340 36.029 272 136 9 1 260 33 278 1.33e-44 159
MS.gene74913.t1 AT2G02340 34.211 228 112 8 292 493 51 266 2.29e-27 112
MS.gene74913.t1 AT2G02230 33.003 303 151 8 2 276 30 308 2.00e-42 155
MS.gene74913.t1 AT2G02230 39.024 164 90 4 292 452 47 203 8.43e-26 108
MS.gene74913.t1 AT2G02350 34.082 267 149 6 2 265 22 264 2.37e-41 150
MS.gene74913.t1 AT2G02350 32.870 216 124 6 292 493 39 247 3.51e-25 105
MS.gene74913.t1 AT1G09155 38.636 264 150 8 7 264 3 260 3.12e-41 150
MS.gene74913.t1 AT1G09155 33.077 260 134 7 292 517 15 268 5.94e-27 110
MS.gene74913.t1 AT1G56240 37.276 279 154 8 7 271 4 275 2.36e-39 145
MS.gene74913.t1 AT1G56240 32.700 263 137 8 292 520 16 272 4.70e-25 105
MS.gene74913.t1 AT1G56250 36.713 286 158 10 7 280 4 278 1.59e-38 142
MS.gene74913.t1 AT1G56250 32.692 260 135 8 292 517 16 269 3.82e-23 99.8
MS.gene74913.t1 AT2G02300 36.255 251 118 9 4 252 34 244 1.31e-36 137
MS.gene74913.t1 AT2G02300 35.266 207 121 6 289 493 47 242 1.85e-27 112
MS.gene74913.t1 AT2G02310 31.698 265 154 6 2 263 43 283 1.89e-35 135
MS.gene74913.t1 AT2G02310 32.870 216 124 6 292 493 60 268 5.38e-24 102
MS.gene74913.t1 AT2G02320 34.351 262 143 7 7 264 43 279 3.12e-35 134
MS.gene74913.t1 AT2G02320 35.426 223 109 10 292 493 55 263 1.28e-26 110
MS.gene74913.t1 AT5G24560 41.447 152 81 3 3 154 2 145 1.87e-30 118
MS.gene74913.t1 AT5G24560 41.538 130 63 3 292 415 18 140 7.15e-22 94.0
MS.gene74913.t1 AT3G53000 32.192 146 94 3 7 152 24 164 1.53e-19 89.7
MS.gene74913.t1 AT2G02350 31.707 164 92 4 105 265 1 147 5.00e-18 82.4
MS.gene74913.t1 AT1G12710 33.103 145 92 3 7 151 31 170 2.12e-15 77.4
MS.gene74913.t1 AT1G63090 32.121 165 103 5 7 170 29 185 3.00e-15 77.0
MS.gene74913.t1 AT3G61060 27.439 164 113 4 7 170 28 185 1.24e-14 75.1
MS.gene74913.t1 AT5G52120 28.205 156 106 3 1 152 18 171 2.06e-13 71.2
MS.gene74913.t1 AT3G61060 27.273 165 113 5 7 170 28 186 4.27e-13 70.5

Find 131 sgRNAs with CRISPR-Local

Find 377 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACCATTCTTGATGATAAT+TGG 0.098885 1.1:+59372022 None:intergenic
TAAACCACATACTGAGTATT+TGG 0.163201 1.1:+59367236 None:intergenic
ACCGAGCAATATTGATTTAA+TGG 0.199236 1.1:+59371094 None:intergenic
AAGTACTAAAACTGTCTTAT+TGG 0.208433 1.1:-59371144 MS.gene74913:CDS
TCTTGGCATTGCTTGGGATA+TGG 0.241695 1.1:-59371843 MS.gene74913:CDS
ACGCAAAATAATAAGTTTAC+AGG 0.256971 1.1:+59367170 None:intergenic
ACACAAATTTAGTGCTTCTA+TGG 0.260701 1.1:+59367138 None:intergenic
ATGGGAGAGTTCTTTAATTT+AGG 0.272165 1.1:-59370987 MS.gene74913:CDS
TACGTGGGTTTAAAATTTAT+TGG 0.284191 1.1:-59367283 MS.gene74913:CDS
CATCATCAAGAAGGGTAAAA+AGG 0.285819 1.1:-59367728 MS.gene74913:intron
TAAGCCGCATACTGAGTATT+TGG 0.291931 1.1:+59371248 None:intergenic
GGCGGCATAGCTTCCACATT+TGG 0.323609 1.1:+59371119 None:intergenic
TTCAAAACGATTGCTGCATT+TGG 0.331729 1.1:-59367206 MS.gene74913:CDS
CACCATTCTTGATGATAATT+GGG 0.341199 1.1:+59372023 None:intergenic
CTAGATCTCTTGGCATTGCT+TGG 0.349116 1.1:-59371850 MS.gene74913:CDS
TGCCAACACTCCAACCAAAA+AGG 0.355711 1.1:-59372071 MS.gene74913:CDS
TGCCAACGCTCCAACCAAAA+AGG 0.356811 1.1:-59367782 MS.gene74913:CDS
GAAACAAGCTCAGCAACTTC+GGG 0.356958 1.1:+59371320 None:intergenic
AAACCACATACTGAGTATTT+GGG 0.365539 1.1:+59367237 None:intergenic
CACAGACTTAGCTTTCATAA+AGG 0.367660 1.1:+59366476 None:intergenic
TTACCCTTCTTGATGATGAT+AGG 0.368671 1.1:+59367733 None:intergenic
TGCATAGAAAGAGTGGAAAA+AGG 0.371008 1.1:-59371889 MS.gene74913:CDS
GAGAACCTGCCGGCCACAAC+TGG 0.371880 1.1:+59372208 None:intergenic
GGATTGCTATGCCTAATTCC+AGG 0.374957 1.1:-59367514 MS.gene74913:intron
TGTAAACCAAACCTGGAATT+AGG 0.378550 1.1:+59367503 None:intergenic
CGGGAGTCGTACAGAGAGTA+TGG 0.383495 1.1:+59367938 None:intergenic
GACGATGAAGTCGATGAATT+GGG 0.385801 1.1:+59372114 None:intergenic
GGATTGCTATGCCTGATTCC+AGG 0.390951 1.1:-59371799 MS.gene74913:intron
TGGAGTCGTATGAGAGAGTA+TGG 0.393657 1.1:+59372228 None:intergenic
ATGGCGGCAACGCACTCTTC+TGG 0.394654 1.1:+59372247 None:intergenic
ATACGAAACATAGCAACTTC+GGG 0.403568 1.1:+59367305 None:intergenic
AGATGATGAAGTCGATGAAT+TGG 0.404952 1.1:+59367824 None:intergenic
CCGCTGATTCCGACGCCGTA+TGG 0.412845 1.1:-59372159 MS.gene74913:CDS
AGACGATGAAGTCGATGAAT+TGG 0.414822 1.1:+59372113 None:intergenic
ATGCTTGCTGCTAGATCTCT+TGG 0.415529 1.1:-59371860 MS.gene74913:CDS
TGAAATGCAGAGCTTTCAAT+TGG 0.416329 1.1:-59367621 MS.gene74913:intron
ACAATGCACAACAGAGTAGA+AGG 0.419604 1.1:-59371056 MS.gene74913:CDS
GATGATGAAGTCGATGAATT+GGG 0.420088 1.1:+59367825 None:intergenic
AATTTGTGTGTTCCGAAGAA+TGG 0.421725 1.1:-59367124 MS.gene74913:CDS
ACTAGGATGTTGCCATTCTT+CGG 0.429496 1.1:+59367112 None:intergenic
GGAATGTCTTGAAGAATTAC+CGG 0.433481 1.1:-59367976 MS.gene74913:intron
ATATGGATGATGATCGCTAT+TGG 0.445967 1.1:-59371826 MS.gene74913:CDS
TTGGGTGGTTACCTGGAATC+AGG 0.447521 1.1:+59371788 None:intergenic
AGAAACAAGCTCAGCAACTT+CGG 0.449217 1.1:+59371319 None:intergenic
TAGATCTCTTGGCATTGCTT+GGG 0.454015 1.1:-59371849 MS.gene74913:CDS
ATGGCGGCAATGCACTCTTC+CGG 0.461067 1.1:+59367957 None:intergenic
CAATATTGCTCGGTCATGCT+TGG 0.461553 1.1:-59371085 MS.gene74913:CDS
GAGAGTCTGACGGCATCAAC+GGG 0.462082 1.1:+59367919 None:intergenic
GAGGACAGTTCTGAAATCCT+TGG 0.468868 1.1:+59371201 None:intergenic
GTGTGGATGCTTGACATTAG+TGG 0.471464 1.1:-59371296 MS.gene74913:CDS
AGTAAACTTCTGCATCTTCA+AGG 0.478688 1.1:+59367036 None:intergenic
CCGCTGATTCTGACGCCGTA+TGG 0.480200 1.1:-59367870 MS.gene74913:CDS
TATCATCAAGAATGGTGAAA+AGG 0.485783 1.1:-59372017 MS.gene74913:intron
GTTGGAGTGTTGGCAATGGA+AGG 0.492413 1.1:+59372079 None:intergenic
AGGACAGTTCTGAAATCCTT+GGG 0.493582 1.1:+59371202 None:intergenic
CGACTCCAGTTGTGGCCGGC+AGG 0.494022 1.1:-59372213 MS.gene74913:CDS
AGCAATATTGATTTAATGGT+GGG 0.495478 1.1:+59371098 None:intergenic
CGCCCAATTATCATCAAGAA+TGG 0.495686 1.1:-59372025 MS.gene74913:CDS
TTGAGTTATTTCTGTACAGA+TGG 0.504141 1.1:-59367014 MS.gene74913:intron
CACCCATCGCTTCTCAAACT+CGG 0.504886 1.1:+59371023 None:intergenic
ATCACAGGTGTGAGCAGAAG+TGG 0.506592 1.1:-59367535 MS.gene74913:CDS
GTCCCCAAATACTCAGTATG+TGG 0.506871 1.1:-59367240 MS.gene74913:CDS
AGCGGCAGAACGGAATGTCT+TGG 0.509093 1.1:+59367888 None:intergenic
AGCGGCAGAACGGAATGTCT+TGG 0.509093 1.1:+59372177 None:intergenic
TTTGAGAAGCGATGGGTGGT+TGG 0.523663 1.1:-59371018 MS.gene74913:CDS
CGTCCGAGTTTGAGAAGCGA+TGG 0.525014 1.1:-59371026 MS.gene74913:CDS
GGAGAGTCTGACGGCATCAA+CGG 0.526752 1.1:+59367918 None:intergenic
TGGGTGGTTGGAGATTGAGA+TGG 0.532103 1.1:-59367078 MS.gene74913:CDS
TGGGTGGTTGGAGATTGAGA+TGG 0.532103 1.1:-59371006 MS.gene74913:CDS
TTGCTATGTTTCGTATACGT+GGG 0.533173 1.1:-59367298 MS.gene74913:CDS
CATCCTAGTGTGAGACGCGA+TGG 0.536354 1.1:-59367098 MS.gene74913:CDS
GTTGGAGCGTTGGCAATGGA+AGG 0.537765 1.1:+59367790 None:intergenic
GGGTGGTTGGAGATTGAGAT+GGG 0.540728 1.1:-59367077 MS.gene74913:CDS
GGGTGGTTGGAGATTGAGAT+GGG 0.540728 1.1:-59371005 MS.gene74913:CDS
TATACGAAACATAGCAACTT+CGG 0.541273 1.1:+59367304 None:intergenic
TCGTCCTATCATCATCAAGA+AGG 0.543664 1.1:-59367737 MS.gene74913:CDS
ACGGAGAAAGCGATTCCATA+CGG 0.543953 1.1:+59367855 None:intergenic
GAGTTATCAGTTGGTGTCAG+AGG 0.545530 1.1:-59371176 MS.gene74913:CDS
ATGATGATCGCTATTGGAAG+TGG 0.550020 1.1:-59371820 MS.gene74913:CDS
CTCTCATACGACTCCAGTTG+TGG 0.553995 1.1:-59372221 MS.gene74913:CDS
AGTCAAGATGAGTGTTACCC+AGG 0.555540 1.1:-59370949 MS.gene74913:intron
ACCATTAAATCAATATTGCT+CGG 0.556459 1.1:-59371095 MS.gene74913:CDS
ACGATGAAGTCGATGAATTG+GGG 0.559295 1.1:+59372115 None:intergenic
TTTGGTTGGAGCGTTGGCAA+TGG 0.559922 1.1:+59367786 None:intergenic
AGGATTTCAGAACTGTCCTC+AGG 0.560242 1.1:-59371198 MS.gene74913:CDS
CACCCATCGCGTCTCACACT+AGG 0.561220 1.1:+59367095 None:intergenic
TTGCTGAGCTTGTTTCTGTG+TGG 0.563125 1.1:-59371313 MS.gene74913:CDS
TTTGGTTGGAGTGTTGGCAA+TGG 0.565580 1.1:+59372075 None:intergenic
TTCAAGATGTTTGATGCCCA+AGG 0.578861 1.1:-59371218 MS.gene74913:CDS
GGAGTGTTGGCAATGGAAGG+AGG 0.579339 1.1:+59372082 None:intergenic
GAGCAATATTGATTTAATGG+TGG 0.581098 1.1:+59371097 None:intergenic
GTTGCTATGTTTCGTATACG+TGG 0.583165 1.1:-59367299 MS.gene74913:CDS
TGTGAGACGCGATGGGTGGT+TGG 0.584534 1.1:-59367090 MS.gene74913:CDS
CGTCCTATCATCATCAAGAA+GGG 0.585817 1.1:-59367736 MS.gene74913:CDS
TTTCAATTGGATAGAATGAG+TGG 0.586909 1.1:-59367608 MS.gene74913:CDS
ATTCAATTGCATAGAAAGAG+TGG 0.587159 1.1:-59371896 MS.gene74913:CDS
GGAAACCACGGAGAACCTGC+CGG 0.590975 1.1:+59372198 None:intergenic
CATACGACTCCAGTTGTGGC+CGG 0.600489 1.1:-59372217 MS.gene74913:CDS
GTCCGAGTTTGAGAAGCGAT+GGG 0.601232 1.1:-59371025 MS.gene74913:CDS
TGTCTTATTGGATCCAAATG+TGG 0.605426 1.1:-59371132 MS.gene74913:CDS
AACGGAATGTCTTGGAAACG+AGG 0.607347 1.1:+59367896 None:intergenic
GAGTATTTGGAGACAAGACA+CGG 0.607854 1.1:+59371261 None:intergenic
CCATACGGCGTCGGAATCAG+CGG 0.608739 1.1:+59372159 None:intergenic
TGTCCTCAGGAGTTATCAGT+TGG 0.614418 1.1:-59371185 MS.gene74913:CDS
ATCCTAGTGTGAGACGCGAT+GGG 0.617131 1.1:-59367097 MS.gene74913:CDS
CCATACGGCGTCAGAATCAG+CGG 0.619427 1.1:+59367870 None:intergenic
CGTCAGAATCAGCGGCAGAA+CGG 0.619760 1.1:+59367878 None:intergenic
CGTCGGAATCAGCGGCAGAA+CGG 0.619760 1.1:+59372167 None:intergenic
GTCTCCAAATACTCAGTATG+CGG 0.620795 1.1:-59371252 MS.gene74913:CDS
CGAGTTTGAGAAGCGATGGG+TGG 0.621386 1.1:-59371022 MS.gene74913:CDS
ACGGAGAAAATGATTCCATA+CGG 0.624466 1.1:+59372144 None:intergenic
ATGATGAAGTCGATGAATTG+GGG 0.626092 1.1:+59367826 None:intergenic
AATATTGATTTAATGGTGGG+CGG 0.632455 1.1:+59371101 None:intergenic
GGAGCGTTGGCAATGGAAGG+AGG 0.638896 1.1:+59367793 None:intergenic
GGAAACGAGGGAGAGTCTGA+CGG 0.645667 1.1:+59367909 None:intergenic
ATACTGAGTATTTGGGGACA+AGG 0.645914 1.1:+59367244 None:intergenic
AACCACATACTGAGTATTTG+GGG 0.647192 1.1:+59367238 None:intergenic
TGTGGCCGGCAGGTTCTCCG+TGG 0.648406 1.1:-59372203 MS.gene74913:CDS
AAACAAGCTCAGCAACTTCG+GGG 0.651309 1.1:+59371321 None:intergenic
AAAATGATTCCATACGGCGT+CGG 0.655224 1.1:+59372150 None:intergenic
ATTTATTGGACTAGAGACAC+AGG 0.658242 1.1:-59367269 MS.gene74913:CDS
CGATGAAGTCGATGAATTGG+GGG 0.663283 1.1:+59372116 None:intergenic
ACGGAATGTCTTGGAAACGA+GGG 0.667310 1.1:+59367897 None:intergenic
CTAGTGTGAGACGCGATGGG+TGG 0.674218 1.1:-59367094 MS.gene74913:CDS
TGATGAAGTCGATGAATTGG+GGG 0.685586 1.1:+59367827 None:intergenic
ACGGAATGTCTTGGAAACCA+CGG 0.690249 1.1:+59372186 None:intergenic
AGTATTTGGAGACAAGACAC+GGG 0.691675 1.1:+59371262 None:intergenic
ACACCAACTGATAACTCCTG+AGG 0.713843 1.1:+59371182 None:intergenic
TACGAAACATAGCAACTTCG+GGG 0.719896 1.1:+59367306 None:intergenic
AGTCGTATGAGAGAGTATGG+CGG 0.764815 1.1:+59372231 None:intergenic
GAGTCGTACAGAGAGTATGG+CGG 0.769638 1.1:+59367941 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAAGCAATATAATTTA+TGG + chr1.1:59371906-59371925 None:intergenic 10.0%
!! GAATATTTATTATATTAAAG+TGG - chr1.1:59370442-59370461 MS.gene74913:intron 10.0%
!! TGTTAATTATATGAATAAAT+TGG - chr1.1:59367981-59368000 MS.gene74913:intron 10.0%
!!! AAATGATTTTTTTTCTTAAA+TGG + chr1.1:59370193-59370212 None:intergenic 10.0%
!!! AATATAAGTTTTATTTTTCA+AGG + chr1.1:59370053-59370072 None:intergenic 10.0%
!!! ACATATATTCATTTTTTAAA+CGG - chr1.1:59371875-59371894 MS.gene74913:CDS 10.0%
!!! ATATAAGTTTTATTTTTCAA+GGG + chr1.1:59370052-59370071 None:intergenic 10.0%
!!! TTTTTTTTTTGTGAAAAAAA+AGG + chr1.1:59369568-59369587 None:intergenic 10.0%
!! AGTGCATATTTAATTATTAA+TGG + chr1.1:59370110-59370129 None:intergenic 15.0%
!! ATAAATAAATAAATCATCCA+AGG - chr1.1:59369074-59369093 MS.gene74913:intron 15.0%
!! ATATTTAATTATTAATGGAG+GGG + chr1.1:59370105-59370124 None:intergenic 15.0%
!! ATTCCAAAAATAAAATTCAA+GGG + chr1.1:59371164-59371183 None:intergenic 15.0%
!! CAACAATTTAAGAATAAAAT+TGG + chr1.1:59368143-59368162 None:intergenic 15.0%
!! CATAAAAATTAAAAATCTTC+TGG + chr1.1:59368542-59368561 None:intergenic 15.0%
!! CATATTTAATTATTAATGGA+GGG + chr1.1:59370106-59370125 None:intergenic 15.0%
!!! AATGTATATTTTAACATAAG+AGG - chr1.1:59370718-59370737 MS.gene74913:intron 15.0%
!!! ATGTATATTTTAACATAAGA+GGG - chr1.1:59370719-59370738 MS.gene74913:intron 15.0%
!!! CAATAAATTTATTTTAGTTC+TGG - chr1.1:59368295-59368314 MS.gene74913:intron 15.0%
!!! GTAAAAAAAAAGTATGTTTT+TGG - chr1.1:59369775-59369794 MS.gene74913:intron 15.0%
!!! TTTTTTGTTGATAAATTACT+AGG - chr1.1:59370505-59370524 MS.gene74913:intron 15.0%
!! AAAAATGAATATATGTCACA+CGG + chr1.1:59371871-59371890 None:intergenic 20.0%
!! AAAAATTGAGTATAACAGAA+TGG - chr1.1:59369631-59369650 MS.gene74913:intron 20.0%
!! AGTTCCAAATAAATAAGAAA+TGG + chr1.1:59372016-59372035 None:intergenic 20.0%
!! ATTGTAATTCATTCTATACT+AGG - chr1.1:59371935-59371954 MS.gene74913:intron 20.0%
!! GATATATATTGCATAAACTA+TGG + chr1.1:59368272-59368291 None:intergenic 20.0%
!! GATTCCAAAAATAAAATTCA+AGG + chr1.1:59371165-59371184 None:intergenic 20.0%
!! GCATATTTAATTATTAATGG+AGG + chr1.1:59370107-59370126 None:intergenic 20.0%
!! TATTTAATTATTAATGGAGG+GGG + chr1.1:59370104-59370123 None:intergenic 20.0%
!!! AATGTAATTCAAGTTTCTTT+CGG - chr1.1:59370581-59370600 MS.gene74913:intron 20.0%
!!! AATTTTATTTTTGGAATCAC+AGG - chr1.1:59371167-59371186 MS.gene74913:CDS 20.0%
!!! ATGTAATTCAAGTTTTTTTC+AGG - chr1.1:59370646-59370665 MS.gene74913:intron 20.0%
!!! ATTTTCTATACTTAAGATAG+TGG - chr1.1:59368863-59368882 MS.gene74913:intron 20.0%
!!! TGTAATTCAAGTTTTTTTCA+GGG - chr1.1:59370647-59370666 MS.gene74913:intron 20.0%
!!! TGTATATTTTAACATAAGAG+GGG - chr1.1:59370720-59370739 MS.gene74913:intron 20.0%
!!! TTTTTAAAAACTAAACTACG+TGG + chr1.1:59368788-59368807 None:intergenic 20.0%
! AAGTACTAAAACTGTCTTAT+TGG - chr1.1:59367573-59367592 MS.gene74913:CDS 25.0%
! AAGTCTAGTATTCGAAAAAT+TGG + chr1.1:59366744-59366763 None:intergenic 25.0%
! ACCATTAAATCAATATTGCT+CGG - chr1.1:59367622-59367641 MS.gene74913:intron 25.0%
! ACGCAAAATAATAAGTTTAC+AGG + chr1.1:59371550-59371569 None:intergenic 25.0%
! AGTTGCAAAGATAAGAATAA+AGG + chr1.1:59367359-59367378 None:intergenic 25.0%
! ATAAAATACAAGTCCATTGA+AGG + chr1.1:59368390-59368409 None:intergenic 25.0%
! ATACATAGAATTATGAGACA+TGG + chr1.1:59367142-59367161 None:intergenic 25.0%
! CAAGTCATCAGATATATATT+GGG + chr1.1:59366950-59366969 None:intergenic 25.0%
! GTAATTCATAACATCACAAA+TGG + chr1.1:59367316-59367335 None:intergenic 25.0%
! GTCAATTAAGTCAATTAATG+AGG + chr1.1:59366977-59366996 None:intergenic 25.0%
! TAAAATACAAGTCCATTGAA+GGG + chr1.1:59368389-59368408 None:intergenic 25.0%
! TAAGCTATACATTAGATATG+TGG - chr1.1:59368615-59368634 MS.gene74913:intron 25.0%
! TACTCTTAACAAACAGTTAT+CGG - chr1.1:59372216-59372235 MS.gene74913:CDS 25.0%
! TAGATCTTTAATGCAACAAT+TGG + chr1.1:59368189-59368208 None:intergenic 25.0%
! TATACATTAGATATGTGGAA+TGG - chr1.1:59368620-59368639 MS.gene74913:intron 25.0%
! TCAAGAAAAAAATTTCCCTT+CGG + chr1.1:59371736-59371755 None:intergenic 25.0%
! TCAAGTCATCAGATATATAT+TGG + chr1.1:59366951-59366970 None:intergenic 25.0%
! TGATGATATATAATGTTGAC+TGG + chr1.1:59372185-59372204 None:intergenic 25.0%
! TTTGTAGTTACATGTTATGA+AGG - chr1.1:59369367-59369386 MS.gene74913:intron 25.0%
!! AAAACCAACTTTGGTTTATT+AGG + chr1.1:59369131-59369150 None:intergenic 25.0%
!! AAGTTTTTCATCTTCACTTT+TGG - chr1.1:59369866-59369885 MS.gene74913:intron 25.0%
!! AGAATGTCAAAGAAAACTTT+TGG - chr1.1:59368701-59368720 MS.gene74913:intron 25.0%
!! ATGTAATTCAAGTTTCTTTC+GGG - chr1.1:59370582-59370601 MS.gene74913:intron 25.0%
!! CTGTTATACTCAATTTTTGT+TGG + chr1.1:59369629-59369648 None:intergenic 25.0%
!! GAATGTCAAAGAAAACTTTT+GGG - chr1.1:59368702-59368721 MS.gene74913:intron 25.0%
!! TACGTGGGTTTAAAATTTAT+TGG - chr1.1:59371434-59371453 MS.gene74913:intron 25.0%
!! TGAAACAATTTTGTTAAGCT+TGG - chr1.1:59371239-59371258 MS.gene74913:CDS 25.0%
!! TGTAATTCAAGCTTCTTTTA+GGG + chr1.1:59369982-59370001 None:intergenic 25.0%
!! TTCTTTTGCAGTCATTATTT+TGG - chr1.1:59369435-59369454 MS.gene74913:intron 25.0%
!! TTGGTTTATTAGGAGTTTTA+TGG + chr1.1:59369121-59369140 None:intergenic 25.0%
!!! AAGGGAAATTTTTTTCTTGA+AGG - chr1.1:59371736-59371755 MS.gene74913:intron 25.0%
!!! AAGTTTTATTTTTCAAGGGA+GGG + chr1.1:59370048-59370067 None:intergenic 25.0%
!!! AGACAGTTTTAGTACTTTTA+TGG + chr1.1:59367570-59367589 None:intergenic 25.0%
!!! AGCAATATTGATTTAATGGT+GGG + chr1.1:59367622-59367641 None:intergenic 25.0%
!!! GATCCCTTGAATTTTATTTT+TGG - chr1.1:59371158-59371177 MS.gene74913:CDS 25.0%
!!! GTGTGTATTTTAACTTAAGA+GGG + chr1.1:59370021-59370040 None:intergenic 25.0%
!!! TAAGTTTTATTTTTCAAGGG+AGG + chr1.1:59370049-59370068 None:intergenic 25.0%
!!! TATTTTAGTTCTGGACTAAT+AGG - chr1.1:59368304-59368323 MS.gene74913:intron 25.0%
!!! TCTTGACTTCTTTATTTTTG+AGG + chr1.1:59367756-59367775 None:intergenic 25.0%
!!! TGTAGATTTTAACGTAAGAA+GGG - chr1.1:59370553-59370572 MS.gene74913:intron 25.0%
!!! TGTGTATTTTAACTTAAGAG+GGG + chr1.1:59370020-59370039 None:intergenic 25.0%
!!! TGTGTGTATTTTAACTTAAG+AGG + chr1.1:59370022-59370041 None:intergenic 25.0%
!!! TTATTATTTTGCGTCAAAGA+AGG - chr1.1:59371556-59371575 MS.gene74913:intron 25.0%
!!! TTGGGAAATTTTTTTCTTGA+AGG - chr1.1:59367808-59367827 MS.gene74913:CDS 25.0%
!!! TTGTAGATTTTAACGTAAGA+AGG - chr1.1:59370552-59370571 MS.gene74913:intron 25.0%
AAAAATGTTGCACATACTGA+AGG + chr1.1:59369254-59369273 None:intergenic 30.0%
AAACCACATACTGAGTATTT+GGG + chr1.1:59371483-59371502 None:intergenic 30.0%
AACATTCAGTAAACAATGCA+GGG - chr1.1:59371792-59371811 MS.gene74913:intron 30.0%
AACTCCTAATAAACCAAAGT+TGG - chr1.1:59369124-59369143 MS.gene74913:intron 30.0%
AATAAAGATCTGTCAAATCC+AGG + chr1.1:59368097-59368116 None:intergenic 30.0%
AATACACCAAAGAAACAAGA+TGG - chr1.1:59368946-59368965 MS.gene74913:intron 30.0%
ACACAAATTTAGTGCTTCTA+TGG + chr1.1:59371582-59371601 None:intergenic 30.0%
ACTTGAGTTTACTTTAAACG+AGG + chr1.1:59369894-59369913 None:intergenic 30.0%
AGGATTCATAACATCACAAA+TGG + chr1.1:59369285-59369304 None:intergenic 30.0%
ATTCAATTGCATAGAAAGAG+TGG - chr1.1:59366821-59366840 MS.gene74913:intron 30.0%
CCCAAGAAAAATTGTATTGT+GGG + chr1.1:59370469-59370488 None:intergenic 30.0%
CCTAGTATTATATCTTGAGA+AGG - chr1.1:59368328-59368347 MS.gene74913:intron 30.0%
CCTCAGGAAATTTCATAAAA+AGG + chr1.1:59369490-59369509 None:intergenic 30.0%
CCTTCTCAAGATATAATACT+AGG + chr1.1:59368331-59368350 None:intergenic 30.0%
CTAGGAAAACAACCTATTAA+CGG - chr1.1:59370523-59370542 MS.gene74913:intron 30.0%
CTCAAATGAAAACCAACTTA+GGG - chr1.1:59369743-59369762 MS.gene74913:intron 30.0%
CTTGAGTTTACTTTAAACGA+GGG + chr1.1:59369893-59369912 None:intergenic 30.0%
GAAAAAACACTACTAGATTG+TGG + chr1.1:59368907-59368926 None:intergenic 30.0%
GATCAATCAATAGTAAGTGT+CGG + chr1.1:59367078-59367097 None:intergenic 30.0%
GATCTTTATTGTTTCAGTCT+TGG - chr1.1:59368107-59368126 MS.gene74913:intron 30.0%
GCATTCTATACTCAATGATA+AGG + chr1.1:59371053-59371072 None:intergenic 30.0%
GTGATTCATAACATCACAAA+TGG + chr1.1:59371331-59371350 None:intergenic 30.0%
TAAACCACATACTGAGTATT+TGG + chr1.1:59371484-59371503 None:intergenic 30.0%
TATACGAAACATAGCAACTT+CGG + chr1.1:59371416-59371435 None:intergenic 30.0%
TATATTCACTCCTATATCAG+TGG - chr1.1:59368407-59368426 MS.gene74913:intron 30.0%
TATCATCAAGAATGGTGAAA+AGG - chr1.1:59366700-59366719 MS.gene74913:intron 30.0%
TCCCAAGAAAAATTGTATTG+TGG + chr1.1:59370470-59370489 None:intergenic 30.0%
TCTAGTATTCGAAAAATTGG+CGG + chr1.1:59366741-59366760 None:intergenic 30.0%
TGAAACAATTTAGTTACGCT+TGG - chr1.1:59367224-59367243 MS.gene74913:CDS 30.0%
TGTTATTGAGGTTCAGATTA+GGG + chr1.1:59367108-59367127 None:intergenic 30.0%
TTGTAATTCAAATCTCATGG+AGG + chr1.1:59370081-59370100 None:intergenic 30.0%
TTTCAATTGGATAGAATGAG+TGG - chr1.1:59371109-59371128 MS.gene74913:CDS 30.0%
TTTGTGGGAAATTTCATAGT+CGG + chr1.1:59368747-59368766 None:intergenic 30.0%
! ACCCACAATACAATTTTTCT+TGG - chr1.1:59370465-59370484 MS.gene74913:intron 30.0%
! ATGGGAGAGTTCTTTAATTT+AGG - chr1.1:59367730-59367749 MS.gene74913:CDS 30.0%
! CACAAATGGAGTATTTATAC+AGG + chr1.1:59367302-59367321 None:intergenic 30.0%
! CACCATTCTTGATGATAATT+GGG + chr1.1:59366697-59366716 None:intergenic 30.0%
! CCCACAATACAATTTTTCTT+GGG - chr1.1:59370466-59370485 MS.gene74913:intron 30.0%
! CCTTTTTATGAAATTTCCTG+AGG - chr1.1:59369487-59369506 MS.gene74913:intron 30.0%
! GCTGCCATTTCTTATTTATT+TGG - chr1.1:59372009-59372028 MS.gene74913:intron 30.0%
! GTAATTCAAGCTTCTTTTAG+GGG + chr1.1:59369981-59370000 None:intergenic 30.0%
! GTGTAATTCAAGCTTCTTTT+AGG + chr1.1:59369983-59370002 None:intergenic 30.0%
! GTTGCTTAATTTTCTTCCTT+AGG + chr1.1:59367847-59367866 None:intergenic 30.0%
! TATCTTTGCAACTTTTGTGT+TGG - chr1.1:59367366-59367385 MS.gene74913:intron 30.0%
! TCACCATTCTTGATGATAAT+TGG + chr1.1:59366698-59366717 None:intergenic 30.0%
! TGATATGTTTTGCATAAGAG+AGG - chr1.1:59370690-59370709 MS.gene74913:intron 30.0%
! TGTAATTCAAGTTTCTTTCG+GGG - chr1.1:59370583-59370602 MS.gene74913:intron 30.0%
! TTGCAACTTTTGTGTTGTAT+AGG - chr1.1:59371386-59371405 MS.gene74913:intron 30.0%
! TTTAACTGATTTCCTTGCAA+CGG - chr1.1:59368005-59368024 MS.gene74913:intron 30.0%
! TTTAGTGCTACATCCTTTTA+TGG - chr1.1:59368444-59368463 MS.gene74913:intron 30.0%
!! AATATTGATTTAATGGTGGG+CGG + chr1.1:59367619-59367638 None:intergenic 30.0%
!! ACCGAGCAATATTGATTTAA+TGG + chr1.1:59367626-59367645 None:intergenic 30.0%
!! GAGCAATATTGATTTAATGG+TGG + chr1.1:59367623-59367642 None:intergenic 30.0%
!! GTTGGTAAATTTTGTTCCTT+AGG + chr1.1:59371775-59371794 None:intergenic 30.0%
!! TATGATGATGAAAAGTGTCT+CGG + chr1.1:59367192-59367211 None:intergenic 30.0%
!! TTCTTTGGTGTATTCTCTTT+TGG + chr1.1:59368940-59368959 None:intergenic 30.0%
!! TTGAGTTATTTCTGTACAGA+TGG - chr1.1:59371703-59371722 MS.gene74913:intron 30.0%
!!! AGTCGTCTTTATTTTGCTTA+TGG - chr1.1:59368224-59368243 MS.gene74913:intron 30.0%
!!! AGTTTTATTTTTCAAGGGAG+GGG + chr1.1:59370047-59370066 None:intergenic 30.0%
!!! ATAAACCAAAGTTGGTTTTG+AGG - chr1.1:59369132-59369151 MS.gene74913:intron 30.0%
AAACTAATGTCGTCAATCGA+AGG + chr1.1:59372064-59372083 None:intergenic 35.0%
AACCACATACTGAGTATTTG+GGG + chr1.1:59371482-59371501 None:intergenic 35.0%
AAGCTTAGCAACTTCAACTA+TGG + chr1.1:59369349-59369368 None:intergenic 35.0%
AAGGCTATCATTCGAGAAAT+TGG + chr1.1:59371034-59371053 None:intergenic 35.0%
AATCCCATAAAAACGTTGTG+TGG + chr1.1:59367022-59367041 None:intergenic 35.0%
AATTCAAATCTCATGGAGGA+GGG + chr1.1:59370077-59370096 None:intergenic 35.0%
AATTTCCCACAAACTAATGC+TGG - chr1.1:59368754-59368773 MS.gene74913:intron 35.0%
AATTTGTGTGTTCCGAAGAA+TGG - chr1.1:59371593-59371612 MS.gene74913:intron 35.0%
ACATTCAGTAAACAATGCAG+GGG - chr1.1:59371793-59371812 MS.gene74913:intron 35.0%
ACGGAGAAAATGATTCCATA+CGG + chr1.1:59366576-59366595 None:intergenic 35.0%
AGAATGCTGCTCAAAATTCA+CGG + chr1.1:59368359-59368378 None:intergenic 35.0%
AGACGACTAAACTGTATAGA+TGG + chr1.1:59368212-59368231 None:intergenic 35.0%
AGATGATGAAGTCGATGAAT+TGG + chr1.1:59370896-59370915 None:intergenic 35.0%
AGGAATAGAAGTTAGACCTA+AGG - chr1.1:59367828-59367847 MS.gene74913:CDS 35.0%
AGGTTCAGATTAGGGTTTAT+AGG + chr1.1:59367100-59367119 None:intergenic 35.0%
AGTAAACTTCTGCATCTTCA+AGG + chr1.1:59371684-59371703 None:intergenic 35.0%
ATACGAAACATAGCAACTTC+GGG + chr1.1:59371415-59371434 None:intergenic 35.0%
ATATATATTGGGTGGTTACC+TGG + chr1.1:59366939-59366958 None:intergenic 35.0%
ATATGGATGATGATCGCTAT+TGG - chr1.1:59366891-59366910 MS.gene74913:intron 35.0%
ATGATGAAGTCGATGAATTG+GGG + chr1.1:59370894-59370913 None:intergenic 35.0%
ATTCTGTAGAAACCCTTCAA+TGG - chr1.1:59368374-59368393 MS.gene74913:intron 35.0%
ATTTCCATTGTGCTTAAGGA+CGG + chr1.1:59369034-59369053 None:intergenic 35.0%
CAACATTCAGTAAACAATGC+AGG - chr1.1:59371791-59371810 MS.gene74913:intron 35.0%
CAGGCTCATCAACTAAAATT+TGG + chr1.1:59367260-59367279 None:intergenic 35.0%
CATCATCAAGAAGGGTAAAA+AGG - chr1.1:59370989-59371008 MS.gene74913:CDS 35.0%
CCTCAAATGAAAACCAACTT+AGG - chr1.1:59369742-59369761 MS.gene74913:intron 35.0%
CCTTAAGCACAATGGAAATT+GGG - chr1.1:59369035-59369054 MS.gene74913:intron 35.0%
CTACAATTTCCTCCGTTAAT+AGG + chr1.1:59370538-59370557 None:intergenic 35.0%
CTGCATTGTTTACTGAATGT+TGG + chr1.1:59371793-59371812 None:intergenic 35.0%
CTGTTATTGAGGTTCAGATT+AGG + chr1.1:59367109-59367128 None:intergenic 35.0%
GATGATGAAGTCGATGAATT+GGG + chr1.1:59370895-59370914 None:intergenic 35.0%
GGGTTGTAATTCAAATCTCA+TGG + chr1.1:59370084-59370103 None:intergenic 35.0%
GTCATCAGATATATATTGGG+TGG + chr1.1:59366947-59366966 None:intergenic 35.0%
TAATTCAAATCTCATGGAGG+AGG + chr1.1:59370078-59370097 None:intergenic 35.0%
TACACTAACATTGCATTTGC+AGG + chr1.1:59371294-59371313 None:intergenic 35.0%
TATAACCCTCAAGTATAAGC+AGG - chr1.1:59369174-59369193 MS.gene74913:intron 35.0%
TCCTTAAGCACAATGGAAAT+TGG - chr1.1:59369034-59369053 MS.gene74913:intron 35.0%
TGAAATGCAGAGCTTTCAAT+TGG - chr1.1:59371096-59371115 MS.gene74913:CDS 35.0%
TGCATAGAAAGAGTGGAAAA+AGG - chr1.1:59366828-59366847 MS.gene74913:intron 35.0%
TGTAAACCAAACCTGGAATT+AGG + chr1.1:59371217-59371236 None:intergenic 35.0%
TGTAGATACACTAACAATGC+AGG + chr1.1:59367279-59367298 None:intergenic 35.0%
TTATGAAATTTCCTGAGGTG+AGG - chr1.1:59369492-59369511 MS.gene74913:intron 35.0%
TTCAAAACGATTGCTGCATT+TGG - chr1.1:59371511-59371530 MS.gene74913:intron 35.0%
TTGCTATGTTTCGTATACGT+GGG - chr1.1:59371419-59371438 MS.gene74913:intron 35.0%
TTGTGGGAAATTTCATAGTC+GGG + chr1.1:59368746-59368765 None:intergenic 35.0%
! ACTGCTATGAAGCACTTATA+TGG - chr1.1:59366995-59367014 MS.gene74913:intron 35.0%
! ACTTCTAAAAGCTCACAAGA+AGG + chr1.1:59369466-59369485 None:intergenic 35.0%
! ATGTTGCCATCTTGTTTCTT+TGG + chr1.1:59368955-59368974 None:intergenic 35.0%
! ATTTATTGGACTAGAGACAC+AGG - chr1.1:59371448-59371467 MS.gene74913:intron 35.0%
! CACAGACTTAGCTTTCATAA+AGG + chr1.1:59372244-59372263 None:intergenic 35.0%
! GTAATTCAAGTTTCTTTCGG+GGG - chr1.1:59370584-59370603 MS.gene74913:intron 35.0%
! TAAAACTTTAAGAGCTCTCC+TGG + chr1.1:59372110-59372129 None:intergenic 35.0%
! TATGTTTTGCATAAGAGAGG+AGG - chr1.1:59370693-59370712 MS.gene74913:intron 35.0%
! TGTCTTATTGGATCCAAATG+TGG - chr1.1:59367585-59367604 MS.gene74913:CDS 35.0%
! TTTCAAGTGTAAACCAAACC+TGG + chr1.1:59371224-59371243 None:intergenic 35.0%
!! ACAGATGGTTATTTTCCGAA+GGG - chr1.1:59371718-59371737 MS.gene74913:intron 35.0%
!! AGATTTTAACGTAAGAAGGG+TGG - chr1.1:59370556-59370575 MS.gene74913:intron 35.0%
!! CAATACCAGCATTAGTTTGT+GGG + chr1.1:59368762-59368781 None:intergenic 35.0%
!! CTTATGCACAAAGCTTTTTC+TGG - chr1.1:59368471-59368490 MS.gene74913:intron 35.0%
!! TACAGATGGTTATTTTCCGA+AGG - chr1.1:59371717-59371736 MS.gene74913:intron 35.0%
!! TCTTGTGCTGATTATTAAGG+CGG + chr1.1:59369011-59369030 None:intergenic 35.0%
!! TGATTTTAACGTAAGAAGCG+TGG - chr1.1:59370620-59370639 MS.gene74913:intron 35.0%
!! TTACCCTTCTTGATGATGAT+AGG + chr1.1:59370987-59371006 None:intergenic 35.0%
!!! ACATTAGTTTTCGTTCACTC+TGG - chr1.1:59372074-59372093 MS.gene74913:CDS 35.0%
!!! CCTAAGTTGGTTTTCATTTG+AGG + chr1.1:59369745-59369764 None:intergenic 35.0%
!!! TCAAGTTTTTTTCAGGGAGT+GGG - chr1.1:59370653-59370672 MS.gene74913:intron 35.0%
!!! TTCAAGTTTTTTTCAGGGAG+TGG - chr1.1:59370652-59370671 MS.gene74913:intron 35.0%
AAAATGATTCCATACGGCGT+CGG + chr1.1:59366570-59366589 None:intergenic 40.0%
AAGGCAACACAAGTGTTAGT+TGG - chr1.1:59369386-59369405 MS.gene74913:intron 40.0%
ACAATGCACAACAGAGTAGA+AGG - chr1.1:59367661-59367680 MS.gene74913:intron 40.0%
ACGATGAAGTCGATGAATTG+GGG + chr1.1:59366605-59366624 None:intergenic 40.0%
ACTAGGATGTTGCCATTCTT+CGG + chr1.1:59371608-59371627 None:intergenic 40.0%
AGAAACAAGCTCAGCAACTT+CGG + chr1.1:59367401-59367420 None:intergenic 40.0%
AGACGATGAAGTCGATGAAT+TGG + chr1.1:59366607-59366626 None:intergenic 40.0%
AGAGAATTAACAGCATCTCC+TGG - chr1.1:59368076-59368095 MS.gene74913:intron 40.0%
AGTATTTGGAGACAAGACAC+GGG + chr1.1:59367458-59367477 None:intergenic 40.0%
ATACTGAGTATTTGGGGACA+AGG + chr1.1:59371476-59371495 None:intergenic 40.0%
ATGAAAACCAACTTAGGGTC+AGG - chr1.1:59369748-59369767 MS.gene74913:intron 40.0%
ATGATGATCGCTATTGGAAG+TGG - chr1.1:59366897-59366916 MS.gene74913:intron 40.0%
ATTCAAATCTCATGGAGGAG+GGG + chr1.1:59370076-59370095 None:intergenic 40.0%
CAGGCTCATCTACTAGTATA+TGG + chr1.1:59371275-59371294 None:intergenic 40.0%
CCACAAACTAATGCTGGTAT+TGG - chr1.1:59368760-59368779 MS.gene74913:intron 40.0%
CCCAATTTCCATTGTGCTTA+AGG + chr1.1:59369038-59369057 None:intergenic 40.0%
CGCCCAATTATCATCAAGAA+TGG - chr1.1:59366692-59366711 MS.gene74913:intron 40.0%
CGTCCTATCATCATCAAGAA+GGG - chr1.1:59370981-59371000 MS.gene74913:CDS 40.0%
CTAATTGTGAGCTGCTAGAA+TGG + chr1.1:59368683-59368702 None:intergenic 40.0%
CTATCATTCGAGAAATTGGC+GGG + chr1.1:59371030-59371049 None:intergenic 40.0%
CTGAACCTCAATAACAGTGA+TGG - chr1.1:59367112-59367131 MS.gene74913:CDS 40.0%
GAAGTGAGTTCCACTGATAT+AGG + chr1.1:59368420-59368439 None:intergenic 40.0%
GACGATGAAGTCGATGAATT+GGG + chr1.1:59366606-59366625 None:intergenic 40.0%
GACTACCATCACTGTTATTG+AGG + chr1.1:59367120-59367139 None:intergenic 40.0%
GAGTATTTGGAGACAAGACA+CGG + chr1.1:59367459-59367478 None:intergenic 40.0%
GCTATCATTCGAGAAATTGG+CGG + chr1.1:59371031-59371050 None:intergenic 40.0%
GCTTGAATTACACTCCTCTT+CGG - chr1.1:59369990-59370009 MS.gene74913:intron 40.0%
GGAAAACAACCTATTAACGG+AGG - chr1.1:59370526-59370545 MS.gene74913:intron 40.0%
GGTTAACTGAGCAAACTATG+TGG + chr1.1:59369100-59369119 None:intergenic 40.0%
GTCTCCAAATACTCAGTATG+CGG - chr1.1:59367465-59367484 MS.gene74913:intron 40.0%
GTTGCTATGTTTCGTATACG+TGG - chr1.1:59371418-59371437 MS.gene74913:intron 40.0%
TAAGCCGCATACTGAGTATT+TGG + chr1.1:59367472-59367491 None:intergenic 40.0%
TACGAAACATAGCAACTTCG+GGG + chr1.1:59371414-59371433 None:intergenic 40.0%
TAGATCTCTTGGCATTGCTT+GGG - chr1.1:59366868-59366887 MS.gene74913:intron 40.0%
TCGGTAACTATCACTTACGT+AGG + chr1.1:59367059-59367078 None:intergenic 40.0%
TCGTCCTATCATCATCAAGA+AGG - chr1.1:59370980-59370999 MS.gene74913:CDS 40.0%
TGAAAACCAACTTAGGGTCA+GGG - chr1.1:59369749-59369768 MS.gene74913:intron 40.0%
TGATGAAGTCGATGAATTGG+GGG + chr1.1:59370893-59370912 None:intergenic 40.0%
TGGAACTGTTTGCAAATTGC+AGG + chr1.1:59368657-59368676 None:intergenic 40.0%
TGTGGGAAATTTCATAGTCG+GGG + chr1.1:59368745-59368764 None:intergenic 40.0%
TTCAAGATGTTTGATGCCCA+AGG - chr1.1:59367499-59367518 MS.gene74913:intron 40.0%
! AACACTTGCTGAACTATGCA+GGG - chr1.1:59367864-59367883 MS.gene74913:CDS 40.0%
! ATTGGCCTGCTTATACTTGA+GGG + chr1.1:59369182-59369201 None:intergenic 40.0%
! ATTGTTTCAGTCTTGGCTCT+TGG - chr1.1:59368114-59368133 MS.gene74913:intron 40.0%
! CCAATACCAGCATTAGTTTG+TGG + chr1.1:59368763-59368782 None:intergenic 40.0%
! GGACCACACAACGTTTTTAT+GGG - chr1.1:59367016-59367035 MS.gene74913:CDS 40.0%
! TATTGGCCTGCTTATACTTG+AGG + chr1.1:59369183-59369202 None:intergenic 40.0%
! TGGACCACACAACGTTTTTA+TGG - chr1.1:59367015-59367034 MS.gene74913:CDS 40.0%
!! AGATACAGAGCCTTTTTGGT+TGG + chr1.1:59366659-59366678 None:intergenic 40.0%
!! AGGACAGTTCTGAAATCCTT+GGG + chr1.1:59367518-59367537 None:intergenic 40.0%
!! CAAAGCTTTTTCTGGATGAG+TGG - chr1.1:59368479-59368498 MS.gene74913:intron 40.0%
!! CGGTCTTGTGCTGATTATTA+AGG + chr1.1:59369014-59369033 None:intergenic 40.0%
!!! AACCAAAGTTGGTTTTGAGG+AGG - chr1.1:59369135-59369154 MS.gene74913:intron 40.0%
!!! ACCAAAGTTGGTTTTGAGGA+GGG - chr1.1:59369136-59369155 MS.gene74913:intron 40.0%
AAACAAGCTCAGCAACTTCG+GGG + chr1.1:59367399-59367418 None:intergenic 45.0%
AAATTTCCCAACAGCAGACC+AGG + chr1.1:59367799-59367818 None:intergenic 45.0%
AACGGAATGTCTTGGAAACG+AGG + chr1.1:59370824-59370843 None:intergenic 45.0%
AAGACCGTCCTTAAGCACAA+TGG - chr1.1:59369027-59369046 MS.gene74913:intron 45.0%
ACACCAACTGATAACTCCTG+AGG + chr1.1:59367538-59367557 None:intergenic 45.0%
ACGGAATGTCTTGGAAACCA+CGG + chr1.1:59366534-59366553 None:intergenic 45.0%
ACGGAATGTCTTGGAAACGA+GGG + chr1.1:59370823-59370842 None:intergenic 45.0%
ACGGAGAAAGCGATTCCATA+CGG + chr1.1:59370865-59370884 None:intergenic 45.0%
AGGATTTCAGAACTGTCCTC+AGG - chr1.1:59367519-59367538 MS.gene74913:CDS 45.0%
AGTCAAGATGAGTGTTACCC+AGG - chr1.1:59367768-59367787 MS.gene74913:CDS 45.0%
AGTGTTACCCAGGTAAAACC+TGG - chr1.1:59367778-59367797 MS.gene74913:CDS 45.0%
CAATATTGCTCGGTCATGCT+TGG - chr1.1:59367632-59367651 MS.gene74913:intron 45.0%
CGATGAAGTCGATGAATTGG+GGG + chr1.1:59366604-59366623 None:intergenic 45.0%
CTAGATCTCTTGGCATTGCT+TGG - chr1.1:59366867-59366886 MS.gene74913:intron 45.0%
CTATGAGCTAACCTAGACTC+TGG + chr1.1:59369309-59369328 None:intergenic 45.0%
GAAAACCAACTTAGGGTCAG+GGG - chr1.1:59369750-59369769 MS.gene74913:intron 45.0%
GAAACAAGCTCAGCAACTTC+GGG + chr1.1:59367400-59367419 None:intergenic 45.0%
GCTATGCCTAATTCCAGGTT+TGG - chr1.1:59371208-59371227 MS.gene74913:CDS 45.0%
GGATTGCTATGCCTAATTCC+AGG - chr1.1:59371203-59371222 MS.gene74913:CDS 45.0%
GTAAAACCTGGTCTGCTGTT+GGG - chr1.1:59367790-59367809 MS.gene74913:CDS 45.0%
GTCCCCAAATACTCAGTATG+TGG - chr1.1:59371477-59371496 MS.gene74913:intron 45.0%
GTGAGCTGCTAGAATGGTAA+TGG + chr1.1:59368677-59368696 None:intergenic 45.0%
GTGCATAAGCACGCCATAAA+AGG + chr1.1:59368460-59368479 None:intergenic 45.0%
GTGGGAAATTTCATAGTCGG+GGG + chr1.1:59368744-59368763 None:intergenic 45.0%
GTGTGGATGCTTGACATTAG+TGG - chr1.1:59367421-59367440 MS.gene74913:intron 45.0%
TATGAATCCTGCCAGAGTCT+AGG - chr1.1:59369295-59369314 MS.gene74913:intron 45.0%
TCCCTCCTCAAAACCAACTT+TGG + chr1.1:59369140-59369159 None:intergenic 45.0%
TCTTGGCATTGCTTGGGATA+TGG - chr1.1:59366874-59366893 MS.gene74913:intron 45.0%
TGCACATACTGAAGGCTTGT+AGG + chr1.1:59369246-59369265 None:intergenic 45.0%
TGCCAACACTCCAACCAAAA+AGG - chr1.1:59366646-59366665 MS.gene74913:intron 45.0%
TGGAGTCGTATGAGAGAGTA+TGG + chr1.1:59366492-59366511 None:intergenic 45.0%
TGTCCTCAGGAGTTATCAGT+TGG - chr1.1:59367532-59367551 MS.gene74913:CDS 45.0%
! AACTGATTTCCTTGCAACGG+AGG - chr1.1:59368008-59368027 MS.gene74913:intron 45.0%
! ACACTTGCTGAACTATGCAG+GGG - chr1.1:59367865-59367884 MS.gene74913:CDS 45.0%
! AGCGAGATACAGAGCCTTTT+TGG + chr1.1:59366663-59366682 None:intergenic 45.0%
! AGTCGTATGAGAGAGTATGG+CGG + chr1.1:59366489-59366508 None:intergenic 45.0%
! ATGCTTGCTGCTAGATCTCT+TGG - chr1.1:59366857-59366876 MS.gene74913:intron 45.0%
! ATTCAAGTTTCTTTCGGGGG+TGG - chr1.1:59370587-59370606 MS.gene74913:intron 45.0%
! ATTGACTTCGCTCAAGAACG+TGG - chr1.1:59368583-59368602 MS.gene74913:intron 45.0%
! CAACACTTGCTGAACTATGC+AGG - chr1.1:59367863-59367882 MS.gene74913:CDS 45.0%
! TTCAAGTTTCTTTCGGGGGT+GGG - chr1.1:59370588-59370607 MS.gene74913:intron 45.0%
!! GAGGACAGTTCTGAAATCCT+TGG + chr1.1:59367519-59367538 None:intergenic 45.0%
!! GAGTTATCAGTTGGTGTCAG+AGG - chr1.1:59367541-59367560 MS.gene74913:CDS 45.0%
!! TGTGCTGATTATTAAGGCGG+TGG + chr1.1:59369008-59369027 None:intergenic 45.0%
!! TTGCTGAGCTTGTTTCTGTG+TGG - chr1.1:59367404-59367423 MS.gene74913:intron 45.0%
!! TTTGGTTGGAGTGTTGGCAA+TGG + chr1.1:59366645-59366664 None:intergenic 45.0%
!!! AGCCTTTTTGGTTGGAGTGT+TGG + chr1.1:59366651-59366670 None:intergenic 45.0%
!! ATATTCTATAATTTATAATA+GGG - chr1.1:59370360-59370379 MS.gene74913:intron 5.0%
!! TATATTCTATAATTTATAAT+AGG - chr1.1:59370359-59370378 MS.gene74913:intron 5.0%
AATGCAGGGGTCTAGCATCT+TGG - chr1.1:59371806-59371825 MS.gene74913:CDS 50.0%
ATCACAGGTGTGAGCAGAAG+TGG - chr1.1:59371182-59371201 MS.gene74913:CDS 50.0%
ATCCTAGTGTGAGACGCGAT+GGG - chr1.1:59371620-59371639 MS.gene74913:intron 50.0%
CACCCATCGCTTCTCAAACT+CGG + chr1.1:59367697-59367716 None:intergenic 50.0%
CCAATAGCATCCGATTGGAG+TGG - chr1.1:59369197-59369216 MS.gene74913:intron 50.0%
CCACTCCAATCGGATGCTAT+TGG + chr1.1:59369200-59369219 None:intergenic 50.0%
CGATGAATTGGGGGTCAGAA+CGG + chr1.1:59366595-59366614 None:intergenic 50.0%
CTCTCATACGACTCCAGTTG+TGG - chr1.1:59366496-59366515 MS.gene74913:intron 50.0%
CTGAGCAAACTATGTGGCCT+TGG + chr1.1:59369094-59369113 None:intergenic 50.0%
CTGTGAGCATCCACTCCAAT+CGG + chr1.1:59369210-59369229 None:intergenic 50.0%
CTTGAAGTTCCTCCGTTGCA+AGG + chr1.1:59368020-59368039 None:intergenic 50.0%
GCTGATTATTAAGGCGGTGG+AGG + chr1.1:59369005-59369024 None:intergenic 50.0%
GGATTGCTATGCCTGATTCC+AGG - chr1.1:59366918-59366937 MS.gene74913:intron 50.0%
GGGTGGTTGGAGATTGAGAT+GGG - chr1.1:59367712-59367731 MS.gene74913:intron 50.0%
GGTAAAACCTGGTCTGCTGT+TGG - chr1.1:59367789-59367808 MS.gene74913:CDS 50.0%
GTCCGAGTTTGAGAAGCGAT+GGG - chr1.1:59367692-59367711 MS.gene74913:intron 50.0%
TGCCAACGCTCCAACCAAAA+AGG - chr1.1:59370935-59370954 MS.gene74913:intron 50.0%
TGGGTGGTTGGAGATTGAGA+TGG - chr1.1:59367711-59367730 MS.gene74913:intron 50.0%
TTAAGAGGGGAGAACCGAAG+AGG + chr1.1:59370007-59370026 None:intergenic 50.0%
TTGGGTGGTTACCTGGAATC+AGG + chr1.1:59366932-59366951 None:intergenic 50.0%
TTTCCTGAGGTGAGGTTGCA+TGG - chr1.1:59369500-59369519 MS.gene74913:intron 50.0%
TTTGAGAAGCGATGGGTGGT+TGG - chr1.1:59367699-59367718 MS.gene74913:intron 50.0%
! ACAGCAGACCAGGTTTTACC+TGG + chr1.1:59367789-59367808 None:intergenic 50.0%
! CAGCAGACCAGGTTTTACCT+GGG + chr1.1:59367788-59367807 None:intergenic 50.0%
! GAGTCGTACAGAGAGTATGG+CGG + chr1.1:59370779-59370798 None:intergenic 50.0%
! GAGTGGATGCTCACAGGTTT+TGG - chr1.1:59369214-59369233 MS.gene74913:intron 50.0%
! TATGCAGGGGTTTTGCGTCT+TGG - chr1.1:59367878-59367897 MS.gene74913:CDS 50.0%
!! GTTGGAGTGTTGGCAATGGA+AGG + chr1.1:59366641-59366660 None:intergenic 50.0%
!! TTTGGTTGGAGCGTTGGCAA+TGG + chr1.1:59370934-59370953 None:intergenic 50.0%
!!! AGCCTTTTTGGTTGGAGCGT+TGG + chr1.1:59370940-59370959 None:intergenic 50.0%
AACCAACTTAGGGTCAGGGG+AGG - chr1.1:59369753-59369772 MS.gene74913:intron 55.0%
ACTCCATGCAACCTCACCTC+AGG + chr1.1:59369506-59369525 None:intergenic 55.0%
AGCGGCAGAACGGAATGTCT+TGG + chr1.1:59366543-59366562 None:intergenic 55.0%
ATGGCGGCAATGCACTCTTC+CGG + chr1.1:59370763-59370782 None:intergenic 55.0%
CAGGGGTCTAGCATCTTGGA+TGG - chr1.1:59371810-59371829 MS.gene74913:CDS 55.0%
CATACGACTCCAGTTGTGGC+CGG - chr1.1:59366500-59366519 MS.gene74913:intron 55.0%
CATCCTAGTGTGAGACGCGA+TGG - chr1.1:59371619-59371638 MS.gene74913:intron 55.0%
CCATACGGCGTCAGAATCAG+CGG + chr1.1:59370850-59370869 None:intergenic 55.0%
CGAGTTTGAGAAGCGATGGG+TGG - chr1.1:59367695-59367714 MS.gene74913:intron 55.0%
CGATTGGAGTGGATGCTCAC+AGG - chr1.1:59369208-59369227 MS.gene74913:intron 55.0%
CGGGAGTCGTACAGAGAGTA+TGG + chr1.1:59370782-59370801 None:intergenic 55.0%
CGTCAGAATCAGCGGCAGAA+CGG + chr1.1:59370842-59370861 None:intergenic 55.0%
CGTCCGAGTTTGAGAAGCGA+TGG - chr1.1:59367691-59367710 MS.gene74913:intron 55.0%
GAGAGTCTGACGGCATCAAC+GGG + chr1.1:59370801-59370820 None:intergenic 55.0%
GAGCTAACCTAGACTCTGGC+AGG + chr1.1:59369305-59369324 None:intergenic 55.0%
GCAGGCCAATAGCATCCGAT+TGG - chr1.1:59369192-59369211 MS.gene74913:intron 55.0%
GGAAACGAGGGAGAGTCTGA+CGG + chr1.1:59370811-59370830 None:intergenic 55.0%
GGAGAGTCTGACGGCATCAA+CGG + chr1.1:59370802-59370821 None:intergenic 55.0%
GGCGGCATAGCTTCCACATT+TGG + chr1.1:59367601-59367620 None:intergenic 55.0%
TACCTCCCCTGACCCTAAGT+TGG + chr1.1:59369758-59369777 None:intergenic 55.0%
! CAGGGGTTTTGCGTCTTGGA+TGG - chr1.1:59367882-59367901 MS.gene74913:CDS 55.0%
!! GGAGTGTTGGCAATGGAAGG+AGG + chr1.1:59366638-59366657 None:intergenic 55.0%
!! GTTGGAGCGTTGGCAATGGA+AGG + chr1.1:59370930-59370949 None:intergenic 55.0%
ATGGCGGCAACGCACTCTTC+TGG + chr1.1:59366473-59366492 None:intergenic 60.0%
CACCCATCGCGTCTCACACT+AGG + chr1.1:59371625-59371644 None:intergenic 60.0%
CGTCGGAATCAGCGGCAGAA+CGG + chr1.1:59366553-59366572 None:intergenic 60.0%
CTAGTGTGAGACGCGATGGG+TGG - chr1.1:59371623-59371642 MS.gene74913:intron 60.0%
GGAAACCACGGAGAACCTGC+CGG + chr1.1:59366522-59366541 None:intergenic 60.0%
TGTGAGACGCGATGGGTGGT+TGG - chr1.1:59371627-59371646 MS.gene74913:intron 60.0%
! CCATACGGCGTCGGAATCAG+CGG + chr1.1:59366561-59366580 None:intergenic 60.0%
!! CACTCTGGAACGCAACGTCC+AGG - chr1.1:59372089-59372108 MS.gene74913:CDS 60.0%
!! CCGCTGATTCTGACGCCGTA+TGG - chr1.1:59370847-59370866 MS.gene74913:intron 60.0%
!! GGAGCGTTGGCAATGGAAGG+AGG + chr1.1:59370927-59370946 None:intergenic 60.0%
GAGAACCTGCCGGCCACAAC+TGG + chr1.1:59366512-59366531 None:intergenic 65.0%
!! CCGCTGATTCCGACGCCGTA+TGG - chr1.1:59366558-59366577 MS.gene74913:intron 65.0%
CGACTCCAGTTGTGGCCGGC+AGG - chr1.1:59366504-59366523 MS.gene74913:intron 70.0%
TGTGGCCGGCAGGTTCTCCG+TGG - chr1.1:59366514-59366533 MS.gene74913:intron 70.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 59366449 59372290 59366449 ID=MS.gene74913
chr1.1 mRNA 59366449 59372290 59366449 ID=MS.gene74913.t1;Parent=MS.gene74913
chr1.1 exon 59372018 59372290 59372018 ID=MS.gene74913.t1.exon1;Parent=MS.gene74913.t1
chr1.1 CDS 59372018 59372290 59372018 ID=cds.MS.gene74913.t1;Parent=MS.gene74913.t1
chr1.1 exon 59371800 59371921 59371800 ID=MS.gene74913.t1.exon2;Parent=MS.gene74913.t1
chr1.1 CDS 59371800 59371921 59371800 ID=cds.MS.gene74913.t1;Parent=MS.gene74913.t1
chr1.1 exon 59370950 59371346 59370950 ID=MS.gene74913.t1.exon3;Parent=MS.gene74913.t1
chr1.1 CDS 59370950 59371346 59370950 ID=cds.MS.gene74913.t1;Parent=MS.gene74913.t1
chr1.1 exon 59370811 59370854 59370811 ID=MS.gene74913.t1.exon4;Parent=MS.gene74913.t1
chr1.1 CDS 59370811 59370854 59370811 ID=cds.MS.gene74913.t1;Parent=MS.gene74913.t1
chr1.1 exon 59367729 59367984 59367729 ID=MS.gene74913.t1.exon5;Parent=MS.gene74913.t1
chr1.1 CDS 59367729 59367984 59367729 ID=cds.MS.gene74913.t1;Parent=MS.gene74913.t1
chr1.1 exon 59367515 59367633 59367515 ID=MS.gene74913.t1.exon6;Parent=MS.gene74913.t1
chr1.1 CDS 59367515 59367633 59367515 ID=cds.MS.gene74913.t1;Parent=MS.gene74913.t1
chr1.1 exon 59367015 59367331 59367015 ID=MS.gene74913.t1.exon7;Parent=MS.gene74913.t1
chr1.1 CDS 59367015 59367331 59367015 ID=cds.MS.gene74913.t1;Parent=MS.gene74913.t1
chr1.1 exon 59366449 59366507 59366449 ID=MS.gene74913.t1.exon8;Parent=MS.gene74913.t1
chr1.1 CDS 59366449 59366507 59366449 ID=cds.MS.gene74913.t1;Parent=MS.gene74913.t1
Gene Sequence

>MS.gene74913

ATGACAAAGTTCGATAAATTGCCAGAAGAGTGCGTTGCCGCCATACTCTCTCATACGACTCCAGTTGTGGCCGGCAGGTTCTCCGTGGTTTCCAAGACATTCCGTTCTGCCGCTGATTCCGACGCCGTATGGAATCATTTTCTCCGTTCTGACCCCCAATTCATCGACTTCATCGTCTCACACTCTCCTCCTTCCATTGCCAACACTCCAACCAAAAAGGCTCTGTATCTCGCTCTCTCTGATCGCCCAATTATCATCAAGAATGGTGAAAAGGTATTATTCTTTGTAACCGCCAATTTTTCGAATACTAGACTTATCATTGACTGTATAGAATGCTGATAAATAAGTTTTGTATGTGTTGAAATTCAGAGCATTCAATTGCATAGAAAGAGTGGAAAAAGGTGTGTCATGCTTGCTGCTAGATCTCTTGGCATTGCTTGGGATATGGATGATGATCGCTATTGGAAGTGGATTGCTATGCCTGATTCCAGGTAACCACCCAATATATATCTGATGACTTGATTACCTCATTAATTGACTTAATTGACTGCTATGAAGCACTTATATGGACCACACAACGTTTTTATGGGATTGAATGATTTTATTTCCTACGTAAGTGATAGTTACCGACACTTACTATTGATTGATCCTATAAACCCTAATCTGAACCTCAATAACAGTGATGGTAGTCCATGTCTCATAATTCTATGTATGCATAAACAATCAAAACAACTTATTAACCGAGACACTTTTCATCATCATAATCAGTTACACTTGAAACAATTTAGTTACGCTTGGTTTACAGCTTCCAAATTTTAGTTGATGAGCCTGCATTGTTAGTGTATCTACACCTGTATAAATACTCCATTTGTGATGTTATGAATTACTTTCAACTTTTCTCTCAGCTCCTTTATTCTTATCTTTGCAACTTTTGTGTTGGATAGATTCCCCGAAGTTGCTGAGCTTGTTTCTGTGTGGATGCTTGACATTAGTGGCGAGATAAAAACCCGTGTCTTGTCTCCAAATACTCAGTATGCGGCTTATCTTGTGTTCAAGATGTTTGATGCCCAAGGATTTCAGAACTGTCCTCAGGAGTTATCAGTTGGTGTCAGAGGTAGCCATAAAAGTACTAAAACTGTCTTATTGGATCCAAATGTGGAAGCTATGCCGCCCACCATTAAATCAATATTGCTCGGTCATGCTTGGACTAGAACAATGCACAACAGAGTAGAAGGACTGCAACGTCCGAGTTTGAGAAGCGATGGGTGGTTGGAGATTGAGATGGGAGAGTTCTTTAATTTAGGCCTCAAAAATAAAGAAGTCAAGATGAGTGTTACCCAGGTAAAACCTGGTCTGCTGTTGGGAAATTTTTTTCTTGAAGGAATAGAAGTTAGACCTAAGGAAGAAAATTAAGCAACACTTGCTGAACTATGCAGGGGTTTTGCGTCTTGGATGGCAAAATGATGCTTGAAGATTTGAAGTCTCAACTTTTCAACATCTATATGACATATATTTATGTTTCAAATTATCTCTGTTAATTATATGAATAAATTGGCTTTAACTGATTTCCTTGCAACGGAGGAACTTCAAGTCAATTTTTAAGTGTAAGATTGCAATACAAATATGCAGAGAATTAACAGCATCTCCTGGATTTGACAGATCTTTATTGTTTCAGTCTTGGCTCTTGGTTGCCAATTTTATTCTTAAATTGTTGAGTTTTTAGCTTCTTATGTTGTGCCAATTGTTGCATTAAAGATCTACCATCTATACAGTTTAGTCGTCTTTATTTTGCTTATGGTTCAGCAATGTGTACATTTGATCCATAGTTTATGCAATATATATCTTACAATAAATTTATTTTAGTTCTGGACTAATAGGACCTAGTATTATATCTTGAGAAGGATATGCCGTGAATTTTGAGCAGCATTCTGTAGAAACCCTTCAATGGACTTGTATTTTATATTCACTCCTATATCAGTGGAACTCACTTCACTTTTTAGTGCTACATCCTTTTATGGCGTGCTTATGCACAAAGCTTTTTCTGGATGAGTGGAATTAGATAATTTAAATGAGTCATATTATGAAATATTCCAGAAGATTTTTAATTTTTATGCGTGTATTTTGTACAAGATCAATTGACTTCGCTCAAGAACGTGGCTATAATTGTAAGCTATACATTAGATATGTGGAATGGATAAACTGATTCCTGCAATTTGCAAACAGTTCCATTACCATTCTAGCAGCTCACAATTAGAATGTCAAAGAAAACTTTTGGGTTTGACATATTGATCACCCCCGACTATGAAATTTCCCACAAACTAATGCTGGTATTGGATCCACGTAGTTTAGTTTTTAAAAAATAAATACATACACTGATATACATTCTTCATAAGATCAATTAATTTTCTTTTCAAATTTTCTATACTTAAGATAGTGGTAGTAAATAGAATGTTTGCCACAATCTAGTAGTGTTTTTTCAGAGAAAACGCCAAAAGAGAATACACCAAAGAAACAAGATGGCAACATTAAGTGTAGCTTATACTTATGCTTATGCCTCCACCGCCTTAATAATCAGCACAAGACCGTCCTTAAGCACAATGGAAATTGGGAATTAATGAGTGATAAATAAATAAATAAATCATCCAAGGCCACATAGTTTGCTCAGTTAACCATAAAACTCCTAATAAACCAAAGTTGGTTTTGAGGAGGGAAACATCAACATTTCTATAACCCTCAAGTATAAGCAGGCCAATAGCATCCGATTGGAGTGGATGCTCACAGGTTTTGGTGAGCGCCTACAAGCCTTCAGTATGTGCAACATTTTTTATTTACTCCATTTGTGATGTTATGAATCCTGCCAGAGTCTAGGTTAGCTCATAGCTTTTCTATTTAAGCGTCCATAGTTGAAGTTGCTAAGCTTTGTAGTTACATGTTATGAAGGCAACACAAGTGTTAGTTGGCTTGTTAATTTCAGTATTTCTCAAAGTTCTTTTGCAGTCATTATTTTGGATCATCCTTCTTGTGAGCTTTTAGAAGTTCCTTTTTATGAAATTTCCTGAGGTGAGGTTGCATGGAGTGTTAATATAGTTCAATAGTCATTTTCTTCTTTACTTTTGCCTTTTTTTTCACAAAAAAAAAAAAAAAAATTCATTTGTCTTTAAATAACTAGTTTGTGAACCAACAAAAATTGAGTATAACAGAATGGACTAAACTTCTATATAATATATTACGAATCAATATTCAGTTTTGAACAAGAGAGATACTCACATTACATTTAGTTTGTGTTCGTCACGCCTCAAATGAAAACCAACTTAGGGTCAGGGGAGGTAAAAAAAAAGTATGTTTTTGGTCTCTATAAATATGTAAGCTTTTCGTTTTATTCTCTCTAAAAAATTTCTTCAACTTTTAGTCTTCAAAAAGTTTTTCATCTTCACTTTTGGTCCCTCGTTTAAAGTAAACTCAAGTAGAATTCATGTTTTTGAATAAAATTTTGCAGAAAAATTTATAATACAGTAAATTACACTCTCTTCCCCTAAAAGAAGCTTGAATTACACTCCTCTTCGGTTCTCCCCTCTTAAGTTAAAATACACACACTCCCCTCCCTTGAAAAATAAAACTTATATTCCCCTCCTCCATGAGATTTGAATTACAACCCCCTCCATTAATAATTAAATATGCACTAGAATTTAATCTATTTCAACATAAATAAATATTTTTAAGATATCTACTAATTTTAAAACACCATTTAAGAAAAAAAATCATTTATTTGTAATTTAAATGTCAAAGATGATTAAATTTAAATATTTTGTTATTAGTTTTATAACTCAGAATTTAAAATTCATTTTTAAATAATCATATTTTATAGACTATAGTAATTTTTCACTCATTTTAATTTTATTTTGTGTTGTTTTATATTCTATAATTTATAATAGGGTTTAAAACTAGATGTTAATGAAATTGTGAATAAAAAATAGAAAAAAAAAATATGAATTTGAATATTTATTATATTAAAGTGGACCCACAATACAATTTTTCTTGGGAGTGTGTTTAATTATTTTTTTTGTTGATAAATTACTAGGAAAACAACCTATTAACGGAGGAAATTGTAGATTTTAACGTAAGAAGGGTGGAGAATGTAATTCAAGTTTCTTTCGGGGGTGGGAAGTGAAAATGATTTTAACGTAAGAAGCGTGGAGAATGTAATTCAAGTTTTTTTCAGGGAGTGGGAAGTGAAAATTTTCTGATATGTTTTGCATAAGAGAGGAGGAGAATGTATATTTTAACATAAGAGGGGAATGTCTTGAAGAATTACCGGAAGAGTGCATTGCCGCCATACTCTCTGTACGACTCCCGTTGATGCCGTCAGACTCTCCCTCGTTTCCAAGACATTCCGTTCTGCCGCTGATTCTGACGCCGTATGGAATCGCTTTCTCCGTTCTGACCCCCAATTCATCGACTTCATCATCTCACATTCTCCTCCTTCCATTGCCAACGCTCCAACCAAAAAGGCTCTGTATCTCGCTCTCTCTGATCGTCCTATCATCATCAAGAAGGGTAAAAAGGTATTATTCTTTGTAACCCGCCAATTTCTCGAATGATAGCCTTATCATTGAGTATAGAATGCTGATAAATAAGTTTTGTATGTGTTGAAATGCAGAGCTTTCAATTGGATAGAATGAGTGGAAAAAAGTGTTATATGCTTGCTGCTAGATCCCTTGAATTTTATTTTTGGAATCACAGGTGTGAGCAGAAGTGGATTGCTATGCCTAATTCCAGGTTTGGTTTACACTTGAAACAATTTTGTTAAGCTTGGTTTACAATTTCCATATACTAGTAGATGAGCCTGCAAATGCAATGTTAGTGTATCTACATCAATACTCCATTTGTGATGTTATGAATCACTTTTAAAAAATTTCTCATCTCTTTTATTCTTATCTTTGCAACTTTTGTGTTGTATAGGTTCCCCGAAGTTGCTATGTTTCGTATACGTGGGTTTAAAATTTATTGGACTAGAGACACAGGTGCCTTGTCCCCAAATACTCAGTATGTGGTTTATCTTGTGTTCAAAACGATTGCTGCATTTGGATTTGAGAATCATCCTGTAAACTTATTATTTTGCGTCAAAGAAGGCCATAGAAGCACTAAATTTGTGTGTTCCGAAGAATGGCAACATCCTAGTGTGAGACGCGATGGGTGGTTGGAGATTGAGATGGGAGAGTTCTTTAATTTATGCCTTGAAGATGCAGAAGTTTACTTGAGTTATTTCTGTACAGATGGTTATTTTCCGAAGGGAAATTTTTTTCTTGAAGGAATAGAAGTTAGACCTAAGGAACAAAATTTACCAACATTCAGTAAACAATGCAGGGGTCTAGCATCTTGGATGGCAGAATACTGCTTGAAATCTCAAATTTTCAACATACCGTGTGACATATATTCATTTTTTAAACGGTCTCTCCATAAATTATATTGCTTATTATGATTATATTATTGTAATTCATTCTATACTAGGATAGTTTTGTTTTAGATGTCTCAACTATATCTTTTAGTACAATATTTATTTGCTGCCATTTCTTATTTATTTGGAACTCTAAACTATGAACACTAGTACTTGACCTTCGATTGACGACATTAGTTTTCGTTCACTCTGGAACGCAACGTCCAGGAGAGCTCTTAAAGTTTTATTTTTGTTTTTTTCTTTCATGTGTTCATTAACACTGTTATTATCTATAATAACCAGTCAACATTATATATCATCATTAGCTTAATTTACTCTTAACAAACAGTTATCGGCACCTTTATGAAAGCTAAGTCTGTGAATCAATGTGCACACTCAACACTTTAG
Protein sequence

>MS.gene74913.t1

MTKFDKLPEECVAAILSHTTPVVAGRFSVVSKTFRSAADSDAVWNHFLRSDPQFIDFIVSHSPPSIANTPTKKALYLALSDRPIIIKNGEKSIQLHRKSGKRCVMLAARSLGIAWDMDDDRYWKWIAMPDSRFPEVAELVSVWMLDISGEIKTRVLSPNTQYAAYLVFKMFDAQGFQNCPQELSVGVRGSHKSTKTVLLDPNVEAMPPTIKSILLGHAWTRTMHNRVEGLQRPSLRSDGWLEIEMGEFFNLGLKNKEVKMSVTQGFCVLDGKMMLEDLKITGRVHCRHTLCTTPVDAVRLSLVSKTFRSAADSDAVWNRFLRSDPQFIDFIISHSPPSIANAPTKKALYLALSDRPIIIKKGKKSFQLDRMSGKKCYMLAARSLEFYFWNHRCEQKWIAMPNSRFPEVAMFRIRGFKIYWTRDTGALSPNTQYVVYLVFKTIAAFGFENHPVNLLFCVKEGHRSTKFVCSEEWQHPSVRRDGWLEIEMGEFFNLCLEDAEVYLSYFCTDVIGTFMKAKSVNQCAHSTL