Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005028.t1 | XP_003590891.2 | 94.4 | 267 | 15 | 0 | 1 | 267 | 1 | 267 | 7.20E-143 | 516.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005028.t1 | Q9ZVQ6 | 47.5 | 261 | 123 | 5 | 8 | 264 | 18 | 268 | 3.3e-64 | 246.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005028.t1 | G7I5M1 | 94.4 | 267 | 15 | 0 | 1 | 267 | 1 | 267 | 5.2e-143 | 516.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005028.t1 | MTR_1g079380 | 94.382 | 267 | 15 | 0 | 1 | 267 | 1 | 267 | 1.23e-178 | 493 |
| MS.gene005028.t1 | MTR_1g079370 | 84.151 | 265 | 42 | 0 | 1 | 265 | 1 | 265 | 4.05e-168 | 465 |
| MS.gene005028.t1 | MTR_1g079180 | 75.000 | 268 | 61 | 3 | 1 | 265 | 1 | 265 | 5.70e-146 | 409 |
| MS.gene005028.t1 | MTR_1g079260 | 69.455 | 275 | 77 | 2 | 1 | 268 | 1 | 275 | 7.27e-140 | 394 |
| MS.gene005028.t1 | MTR_1g079460 | 71.587 | 271 | 72 | 2 | 1 | 268 | 1 | 269 | 2.08e-137 | 388 |
| MS.gene005028.t1 | MTR_1g100597 | 69.928 | 276 | 74 | 2 | 1 | 268 | 1 | 275 | 3.95e-137 | 387 |
| MS.gene005028.t1 | MTR_1g079200 | 71.481 | 270 | 66 | 4 | 1 | 265 | 1 | 264 | 7.95e-135 | 381 |
| MS.gene005028.t1 | MTR_1g079230 | 65.580 | 276 | 87 | 2 | 1 | 268 | 1 | 276 | 5.04e-126 | 359 |
| MS.gene005028.t1 | MTR_1g079850 | 63.380 | 284 | 88 | 3 | 1 | 268 | 1 | 284 | 1.10e-120 | 346 |
| MS.gene005028.t1 | MTR_1g100613 | 67.755 | 245 | 67 | 2 | 15 | 248 | 1 | 244 | 2.52e-115 | 331 |
| MS.gene005028.t1 | MTR_3g452600 | 63.910 | 266 | 90 | 4 | 4 | 268 | 10 | 270 | 2.33e-113 | 327 |
| MS.gene005028.t1 | MTR_1g079250 | 60.498 | 281 | 98 | 5 | 1 | 268 | 1 | 281 | 3.88e-108 | 315 |
| MS.gene005028.t1 | MTR_1g026510 | 56.294 | 286 | 107 | 6 | 1 | 268 | 1 | 286 | 1.20e-105 | 308 |
| MS.gene005028.t1 | MTR_3g006850 | 56.863 | 306 | 87 | 5 | 4 | 268 | 17 | 318 | 1.59e-105 | 309 |
| MS.gene005028.t1 | MTR_1g079410 | 56.667 | 270 | 109 | 4 | 2 | 265 | 6 | 273 | 7.08e-102 | 298 |
| MS.gene005028.t1 | MTR_3g450990 | 56.738 | 282 | 100 | 6 | 4 | 268 | 10 | 286 | 2.02e-99 | 292 |
| MS.gene005028.t1 | MTR_2g079100 | 59.770 | 261 | 95 | 2 | 4 | 262 | 9 | 261 | 1.46e-98 | 290 |
| MS.gene005028.t1 | MTR_1g079350 | 56.522 | 276 | 108 | 6 | 1 | 265 | 1 | 275 | 4.60e-95 | 281 |
| MS.gene005028.t1 | MTR_1g079140 | 49.324 | 296 | 116 | 5 | 3 | 265 | 12 | 306 | 3.47e-92 | 275 |
| MS.gene005028.t1 | MTR_1g078470 | 69.780 | 182 | 49 | 4 | 85 | 265 | 8 | 184 | 2.02e-83 | 248 |
| MS.gene005028.t1 | MTR_1g079340 | 52.595 | 289 | 110 | 8 | 1 | 265 | 40 | 325 | 2.74e-82 | 250 |
| MS.gene005028.t1 | MTR_1g079400 | 48.057 | 283 | 111 | 4 | 4 | 265 | 12 | 279 | 1.89e-81 | 246 |
| MS.gene005028.t1 | MTR_7g096300 | 55.731 | 253 | 93 | 6 | 1 | 245 | 1 | 242 | 3.94e-81 | 259 |
| MS.gene005028.t1 | MTR_7g112550 | 45.775 | 284 | 133 | 8 | 2 | 267 | 5 | 285 | 4.30e-70 | 218 |
| MS.gene005028.t1 | MTR_1g079240 | 61.453 | 179 | 58 | 4 | 87 | 265 | 12 | 179 | 1.68e-63 | 197 |
| MS.gene005028.t1 | MTR_1g083580 | 41.007 | 278 | 148 | 8 | 2 | 265 | 6 | 281 | 3.57e-63 | 200 |
| MS.gene005028.t1 | MTR_7g112560 | 39.245 | 265 | 144 | 6 | 7 | 265 | 4 | 257 | 9.10e-58 | 185 |
| MS.gene005028.t1 | MTR_1g076870 | 66.418 | 134 | 29 | 1 | 128 | 245 | 2 | 135 | 1.56e-54 | 173 |
| MS.gene005028.t1 | MTR_4g023570 | 37.405 | 262 | 133 | 6 | 7 | 265 | 4 | 237 | 1.28e-50 | 166 |
| MS.gene005028.t1 | MTR_1g079130 | 47.090 | 189 | 76 | 4 | 101 | 265 | 1 | 189 | 3.88e-50 | 163 |
| MS.gene005028.t1 | MTR_1g079350 | 50.898 | 167 | 71 | 4 | 1 | 159 | 1 | 164 | 5.63e-45 | 151 |
| MS.gene005028.t1 | MTR_1g079210 | 56.911 | 123 | 41 | 1 | 129 | 239 | 7 | 129 | 2.28e-39 | 134 |
| MS.gene005028.t1 | MTR_3g058640 | 59.804 | 102 | 39 | 1 | 128 | 229 | 7 | 106 | 2.06e-35 | 123 |
| MS.gene005028.t1 | MTR_2g042540 | 60.000 | 105 | 40 | 2 | 1 | 103 | 1 | 105 | 6.13e-34 | 120 |
| MS.gene005028.t1 | MTR_7g096310 | 49.333 | 150 | 68 | 3 | 38 | 185 | 19 | 162 | 7.67e-34 | 120 |
| MS.gene005028.t1 | MTR_1g078460 | 68.966 | 87 | 27 | 0 | 1 | 87 | 64 | 150 | 2.29e-33 | 119 |
| MS.gene005028.t1 | MTR_4g083970 | 30.288 | 208 | 121 | 3 | 63 | 265 | 102 | 290 | 4.17e-29 | 112 |
| MS.gene005028.t1 | MTR_7g103380 | 25.725 | 276 | 179 | 7 | 4 | 264 | 19 | 283 | 5.00e-27 | 106 |
| MS.gene005028.t1 | MTR_1g079220 | 70.588 | 68 | 18 | 1 | 165 | 232 | 1 | 66 | 6.71e-24 | 92.4 |
| MS.gene005028.t1 | MTR_0113s0040 | 32.768 | 177 | 110 | 4 | 2 | 174 | 20 | 191 | 4.59e-23 | 95.9 |
| MS.gene005028.t1 | MTR_0002s0020 | 29.767 | 215 | 123 | 5 | 4 | 195 | 22 | 231 | 9.97e-21 | 89.4 |
| MS.gene005028.t1 | MTR_1g101390 | 33.143 | 175 | 112 | 3 | 2 | 174 | 26 | 197 | 5.82e-20 | 87.4 |
| MS.gene005028.t1 | MTR_5g010800 | 32.450 | 151 | 93 | 4 | 2 | 147 | 15 | 161 | 3.10e-19 | 85.1 |
| MS.gene005028.t1 | MTR_1g079390 | 76.000 | 50 | 10 | 2 | 211 | 260 | 8 | 55 | 4.14e-19 | 79.0 |
| MS.gene005028.t1 | MTR_4g102770 | 32.877 | 146 | 94 | 2 | 4 | 146 | 19 | 163 | 1.19e-16 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005028.t1 | AT2G02360 | 47.328 | 262 | 124 | 5 | 7 | 264 | 17 | 268 | 3.94e-81 | 245 |
| MS.gene005028.t1 | AT1G80110 | 45.594 | 261 | 136 | 3 | 4 | 264 | 1 | 255 | 4.35e-74 | 227 |
| MS.gene005028.t1 | AT2G02340 | 44.074 | 270 | 144 | 4 | 1 | 264 | 33 | 301 | 3.27e-73 | 226 |
| MS.gene005028.t1 | AT2G02240 | 45.385 | 260 | 133 | 5 | 7 | 264 | 64 | 316 | 5.48e-73 | 226 |
| MS.gene005028.t1 | AT2G02250 | 44.528 | 265 | 135 | 7 | 4 | 264 | 47 | 303 | 1.11e-71 | 223 |
| MS.gene005028.t1 | AT2G02230 | 38.689 | 305 | 141 | 7 | 7 | 268 | 35 | 336 | 3.11e-68 | 214 |
| MS.gene005028.t1 | AT1G09155 | 41.935 | 279 | 141 | 7 | 7 | 265 | 3 | 280 | 6.21e-62 | 197 |
| MS.gene005028.t1 | AT2G02350 | 39.623 | 265 | 150 | 6 | 4 | 264 | 24 | 282 | 1.96e-59 | 191 |
| MS.gene005028.t1 | AT1G56240 | 41.727 | 278 | 141 | 6 | 7 | 264 | 4 | 280 | 7.42e-58 | 186 |
| MS.gene005028.t1 | AT1G56250 | 41.935 | 279 | 141 | 6 | 7 | 265 | 4 | 281 | 1.01e-57 | 186 |
| MS.gene005028.t1 | AT2G02320 | 40.602 | 266 | 142 | 7 | 6 | 264 | 42 | 298 | 1.54e-55 | 181 |
| MS.gene005028.t1 | AT2G02310 | 35.985 | 264 | 159 | 5 | 6 | 265 | 47 | 304 | 3.26e-53 | 175 |
| MS.gene005028.t1 | AT2G02300 | 38.519 | 270 | 136 | 8 | 4 | 265 | 34 | 281 | 2.64e-49 | 164 |
| MS.gene005028.t1 | AT5G24560 | 52.143 | 140 | 64 | 1 | 6 | 145 | 5 | 141 | 1.36e-44 | 149 |
| MS.gene005028.t1 | AT5G24560 | 57.143 | 49 | 20 | 1 | 217 | 265 | 145 | 192 | 2.77e-13 | 67.4 |
| MS.gene005028.t1 | AT3G53000 | 29.091 | 275 | 170 | 7 | 4 | 264 | 21 | 284 | 1.62e-30 | 115 |
| MS.gene005028.t1 | AT2G02350 | 36.310 | 168 | 100 | 5 | 101 | 264 | 1 | 165 | 1.74e-28 | 107 |
| MS.gene005028.t1 | AT3G61060 | 25.271 | 277 | 167 | 7 | 6 | 265 | 27 | 280 | 7.63e-23 | 95.1 |
| MS.gene005028.t1 | AT3G61060 | 24.549 | 277 | 170 | 6 | 6 | 265 | 27 | 281 | 6.41e-22 | 92.8 |
| MS.gene005028.t1 | AT1G33920 | 28.235 | 170 | 101 | 3 | 100 | 265 | 12 | 164 | 1.87e-20 | 85.9 |
| MS.gene005028.t1 | AT1G63090 | 33.333 | 165 | 102 | 4 | 4 | 165 | 26 | 185 | 1.15e-19 | 86.7 |
| MS.gene005028.t1 | AT1G12710 | 27.068 | 266 | 177 | 7 | 4 | 264 | 28 | 281 | 2.10e-19 | 85.9 |
| MS.gene005028.t1 | AT4G19840 | 31.953 | 169 | 96 | 6 | 99 | 265 | 94 | 245 | 4.86e-19 | 84.0 |
| MS.gene005028.t1 | AT4G19850 | 29.282 | 181 | 102 | 5 | 92 | 265 | 57 | 218 | 6.03e-19 | 83.2 |
| MS.gene005028.t1 | AT4G19850 | 29.282 | 181 | 102 | 5 | 92 | 265 | 15 | 176 | 6.84e-19 | 82.0 |
| MS.gene005028.t1 | AT5G52120 | 26.370 | 292 | 169 | 8 | 1 | 267 | 18 | 288 | 4.02e-17 | 79.7 |
| MS.gene005028.t1 | AT1G65390 | 28.070 | 171 | 101 | 3 | 100 | 266 | 259 | 411 | 7.51e-16 | 77.0 |
| MS.gene005028.t1 | AT1G12710 | 34.328 | 134 | 82 | 3 | 4 | 134 | 28 | 158 | 1.54e-14 | 72.8 |
| MS.gene005028.t1 | AT4G19850 | 29.655 | 145 | 77 | 4 | 92 | 230 | 57 | 182 | 4.49e-12 | 64.3 |
Find 70 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGCCGCATATTGAGTATT+TGG | 0.191589 | 1.3:+56401085 | None:intergenic |
| CTAGATCTCTTGCCATTGTT+TGG | 0.245415 | 1.3:-56403298 | MS.gene005028:CDS |
| TAGATCTCTTGCCATTGTTT+GGG | 0.268063 | 1.3:-56403297 | MS.gene005028:CDS |
| TTCAAAATGATTAATGCTTC+GGG | 0.296562 | 1.3:-56401055 | MS.gene005028:CDS |
| AAGCCGCATATTGAGTATTT+GGG | 0.318920 | 1.3:+56401086 | None:intergenic |
| CATCATCGATCATGATAATA+AGG | 0.320160 | 1.3:-56403446 | MS.gene005028:intron |
| GTTCAAAATGATTAATGCTT+CGG | 0.326412 | 1.3:-56401056 | MS.gene005028:CDS |
| TCAACAAGCTTAGCGACTTC+AGG | 0.333696 | 1.3:+56401157 | None:intergenic |
| TACAGACAAGGGGTGGTAAT+TGG | 0.334982 | 1.3:-56400811 | MS.gene005028:CDS |
| TGCGGCCTACCTTCCACATT+TGG | 0.361432 | 1.3:+56400956 | None:intergenic |
| GGATTTCTATGCCTGATTCC+AGG | 0.379925 | 1.3:-56403250 | MS.gene005028:intron |
| TTGTCTGTATCACATTCATC+TGG | 0.386190 | 1.3:+56400825 | None:intergenic |
| CCTCCGATTCTGACGCTGTA+TGG | 0.402755 | 1.3:-56403576 | MS.gene005028:CDS |
| TCAAGAGCTAACCTGGAATC+AGG | 0.413242 | 1.3:+56403239 | None:intergenic |
| TAGTACTAAAATTGTCTGTT+TGG | 0.420764 | 1.3:-56400981 | MS.gene005028:CDS |
| GACAGAGATTCAGGATTTGC+CGG | 0.423087 | 1.3:-56403683 | MS.gene005028:CDS |
| CTAAGCTTGTTGATGTGTGT+TGG | 0.438622 | 1.3:-56401147 | MS.gene005028:CDS |
| TGGAGTTGTACGAGAGACTA+TGG | 0.442874 | 1.3:+56403645 | None:intergenic |
| GTGTGTTGGCTTGAAATTCA+TGG | 0.446205 | 1.3:-56401133 | MS.gene005028:CDS |
| TTCTTGAAGGAATAGAAGTT+AGG | 0.449929 | 1.3:-56400775 | MS.gene005028:CDS |
| GGGTGGTTGGAGATTGAGAT+GGG | 0.458032 | 1.3:-56400884 | MS.gene005028:CDS |
| GGGGTGATGATGAGCGCTAT+TGG | 0.463196 | 1.3:-56403277 | MS.gene005028:CDS |
| ATTCCATACAGCGTCAGAAT+CGG | 0.465501 | 1.3:+56403573 | None:intergenic |
| AAGAGAGGTCTCGTTCTTGA+AGG | 0.466484 | 1.3:-56400788 | MS.gene005028:CDS |
| GTTGGTTAATTGTTATACTT+AGG | 0.467370 | 1.3:+56400752 | None:intergenic |
| ATGATGAGCGCTATTGGAAC+TGG | 0.473714 | 1.3:-56403271 | MS.gene005028:CDS |
| ATGGCGGCAATGCATCCTTC+CGG | 0.482859 | 1.3:+56403664 | None:intergenic |
| CAACAAGCTTAGCGACTTCA+GGG | 0.483357 | 1.3:+56401158 | None:intergenic |
| CGTCCTAGTGTGAGAAGCGA+TGG | 0.485861 | 1.3:-56400905 | MS.gene005028:CDS |
| CATATTGAGTATTTGGGGAC+AGG | 0.497456 | 1.3:+56401092 | None:intergenic |
| TTATCATGATCGATGATGAC+AGG | 0.505190 | 1.3:+56403451 | None:intergenic |
| CGTCCTGCGGATTTATCAGT+TGG | 0.505742 | 1.3:-56401022 | MS.gene005028:CDS |
| GTAGGAGCGTTGGCGAGTAA+AGG | 0.512124 | 1.3:+56403508 | None:intergenic |
| TGGGTGGTTGGAGATTGAGA+TGG | 0.517146 | 1.3:-56400885 | MS.gene005028:CDS |
| GAGTCTCTGCCGGCGTCGAG+TGG | 0.524622 | 1.3:+56403625 | None:intergenic |
| CGTCAGAATCGGAGGCTGAT+CGG | 0.538969 | 1.3:+56403584 | None:intergenic |
| CACCCATCGCTTCTCACACT+AGG | 0.543006 | 1.3:+56400902 | None:intergenic |
| CAGCCGCATGACAGAGTACT+CGG | 0.550737 | 1.3:-56400935 | MS.gene005028:CDS |
| GGGATTTCTGAACCGTCCTG+CGG | 0.552108 | 1.3:-56401035 | MS.gene005028:CDS |
| AGTACTCTGTCATGCGGCTG+CGG | 0.560272 | 1.3:+56400938 | None:intergenic |
| GAGATTCAGGATTTGCCGGA+AGG | 0.560627 | 1.3:-56403679 | MS.gene005028:CDS |
| AGATCTCTTGCCATTGTTTG+GGG | 0.561132 | 1.3:-56403296 | MS.gene005028:CDS |
| GATTTATCAGTTGGTGTCGA+AGG | 0.564414 | 1.3:-56401013 | MS.gene005028:CDS |
| ATGATAGATGAAATATCAGA+AGG | 0.573253 | 1.3:+56403541 | None:intergenic |
| TGTGAGAAGCGATGGGTGGT+TGG | 0.576323 | 1.3:-56400897 | MS.gene005028:CDS |
| CTCATCATCACCCCAAACAA+TGG | 0.580299 | 1.3:+56403286 | None:intergenic |
| TGGATCCAAATGTGGAAGGT+AGG | 0.591841 | 1.3:-56400961 | MS.gene005028:CDS |
| GTGGTTGGAGATTGAGATGG+GGG | 0.596500 | 1.3:-56400882 | MS.gene005028:CDS |
| TTATCAGTTGGTGTCGAAGG+TGG | 0.596520 | 1.3:-56401010 | MS.gene005028:CDS |
| AGCCGCATATTGAGTATTTG+GGG | 0.603362 | 1.3:+56401087 | None:intergenic |
| AGGGGTGGTAATTGGAAGAG+AGG | 0.612751 | 1.3:-56400803 | MS.gene005028:CDS |
| CCATACAGCGTCAGAATCGG+AGG | 0.612806 | 1.3:+56403576 | None:intergenic |
| AGAAACGACAGAGTCTCTGC+CGG | 0.615620 | 1.3:+56403615 | None:intergenic |
| GGTGGTTGGAGATTGAGATG+GGG | 0.619250 | 1.3:-56400883 | MS.gene005028:CDS |
| ACACCAACTGATAAATCCGC+AGG | 0.623886 | 1.3:+56401019 | None:intergenic |
| TGTCTGTTTGGATCCAAATG+TGG | 0.625217 | 1.3:-56400969 | MS.gene005028:CDS |
| GTCCCCAAATACTCAATATG+CGG | 0.633956 | 1.3:-56401089 | MS.gene005028:CDS |
| GTCCTAGTGTGAGAAGCGAT+GGG | 0.643186 | 1.3:-56400904 | MS.gene005028:CDS |
| AGTATTTGGGGACAGGACGA+TGG | 0.644084 | 1.3:+56401099 | None:intergenic |
| TATCATGATCGATGATGACA+GGG | 0.656082 | 1.3:+56403452 | None:intergenic |
| AGATGAATGTGATACAGACA+AGG | 0.660761 | 1.3:-56400823 | MS.gene005028:CDS |
| AATGTGATACAGACAAGGGG+TGG | 0.670541 | 1.3:-56400818 | MS.gene005028:CDS |
| AATCCGAGTACTCTGTCATG+CGG | 0.684286 | 1.3:+56400932 | None:intergenic |
| GATGAATGTGATACAGACAA+GGG | 0.695518 | 1.3:-56400822 | MS.gene005028:CDS |
| TGTTTGGATCCAAATGTGGA+AGG | 0.703248 | 1.3:-56400965 | MS.gene005028:CDS |
| ATGAATGTGATACAGACAAG+GGG | 0.709532 | 1.3:-56400821 | MS.gene005028:CDS |
| CTAGTGTGAGAAGCGATGGG+TGG | 0.709944 | 1.3:-56400901 | MS.gene005028:CDS |
| CAACTGATAAATCCGCAGGA+CGG | 0.713336 | 1.3:+56401023 | None:intergenic |
| CGTACAACTCCACTCGACGC+CGG | 0.717247 | 1.3:-56403634 | MS.gene005028:CDS |
| AGTTGTACGAGAGACTATGG+CGG | 0.789727 | 1.3:+56403648 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+CGG | + | chr1.3:56403163-56403144 | None:intergenic | 0.0% |
| !! | AGTTTCATAAAAAATATGAA+AGG | + | chr1.3:56401532-56401551 | None:intergenic | 15.0% |
| !! | CATTAAAAAATAAATAGGTT+CGG | + | chr1.3:56402114-56402133 | None:intergenic | 15.0% |
| !! | TGATGCATTAAAAAATAAAT+AGG | + | chr1.3:56402119-56402138 | None:intergenic | 15.0% |
| !! | AATATGAAAGGACAAAATAA+AGG | + | chr1.3:56401520-56401539 | None:intergenic | 20.0% |
| !! | ATAGTGTTTAGTAAAATTAG+CGG | + | chr1.3:56401559-56401578 | None:intergenic | 20.0% |
| !! | TTGATTAACTCCTAATTAAT+AGG | - | chr1.3:56401222-56401241 | MS.gene005028:intron | 20.0% |
| !!! | AGTCATATCCTTTTTTTTAT+AGG | - | chr1.3:56401662-56401681 | MS.gene005028:intron | 20.0% |
| !!! | ATCAATTTTAACTTGAACAA+AGG | + | chr1.3:56402273-56402292 | None:intergenic | 20.0% |
| !!! | CACTAAAAGTAAAAACATTT+TGG | + | chr1.3:56402532-56402551 | None:intergenic | 20.0% |
| !!! | CTTTTTGAAACTATATTATG+TGG | + | chr1.3:56402468-56402487 | None:intergenic | 20.0% |
| !!! | GATTTTTTAAGATGTTTAGT+TGG | - | chr1.3:56401056-56401075 | MS.gene005028:CDS | 20.0% |
| !!! | GGTCTGATTTTTATAATTTT+TGG | + | chr1.3:56402147-56402166 | None:intergenic | 20.0% |
| !!! | TTTTTCAATTAAGATTGCAT+GGG | + | chr1.3:56401477-56401496 | None:intergenic | 20.0% |
| !!! | TTTTTTCAATTAAGATTGCA+TGG | + | chr1.3:56401478-56401497 | None:intergenic | 20.0% |
| ! | ACTGAACGTTCTTTAAATTT+GGG | + | chr1.3:56401883-56401902 | None:intergenic | 25.0% |
| ! | ATGATAGATGAAATATCAGA+AGG | + | chr1.3:56400904-56400923 | None:intergenic | 25.0% |
| ! | CATTCAAGCCTATAAAAAAA+AGG | + | chr1.3:56401673-56401692 | None:intergenic | 25.0% |
| ! | GTACTATGTTCCTATTAATT+AGG | + | chr1.3:56401235-56401254 | None:intergenic | 25.0% |
| ! | GTACTCGACAAATAAAATAA+TGG | + | chr1.3:56402327-56402346 | None:intergenic | 25.0% |
| ! | GTTCAAAATGATTAATGCTT+CGG | - | chr1.3:56403386-56403405 | MS.gene005028:intron | 25.0% |
| ! | TAATCAATAATGGCTTGATT+CGG | + | chr1.3:56401271-56401290 | None:intergenic | 25.0% |
| ! | TAGTACTAAAATTGTCTGTT+TGG | - | chr1.3:56403461-56403480 | MS.gene005028:CDS | 25.0% |
| ! | TCTGTTTGGTAAAAAAATTG+CGG | + | chr1.3:56401643-56401662 | None:intergenic | 25.0% |
| ! | TTAAGTCTCAAAGAAAACAT+GGG | + | chr1.3:56402792-56402811 | None:intergenic | 25.0% |
| ! | TTCAAAATGATTAATGCTTC+GGG | - | chr1.3:56403387-56403406 | MS.gene005028:intron | 25.0% |
| ! | TTGTAATGCAACAAACAAAT+TGG | + | chr1.3:56402168-56402187 | None:intergenic | 25.0% |
| !! | AATCAAGCCATTATTGATTA+GGG | - | chr1.3:56401271-56401290 | MS.gene005028:intron | 25.0% |
| !! | AGATATTTGAAATGAACAGT+TGG | - | chr1.3:56402670-56402689 | MS.gene005028:intron | 25.0% |
| !! | TTTTAGTCATACAAACTTAC+AGG | + | chr1.3:56401330-56401349 | None:intergenic | 25.0% |
| !!! | TAAGTAATATATGCTGTTTC+AGG | + | chr1.3:56403016-56403035 | None:intergenic | 25.0% |
| !!! | TTTTAACTTGAACAAAGGAA+TGG | + | chr1.3:56402268-56402287 | None:intergenic | 25.0% |
| AAAAAGGATATGACTCTGTT+TGG | + | chr1.3:56401657-56401676 | None:intergenic | 30.0% | |
| AACATAGTACTTGTTCTTGT+TGG | - | chr1.3:56401245-56401264 | MS.gene005028:intron | 30.0% | |
| AATAGCCATGGTAATTCAAT+GGG | + | chr1.3:56402831-56402850 | None:intergenic | 30.0% | |
| ACAGTAATTGATCACTAACA+TGG | + | chr1.3:56401706-56401725 | None:intergenic | 30.0% | |
| AGCAATTAGGAACACAAAAA+AGG | + | chr1.3:56402084-56402103 | None:intergenic | 30.0% | |
| AGTGATCAATTACTGTTGAT+GGG | - | chr1.3:56401710-56401729 | MS.gene005028:intron | 30.0% | |
| ATATATAAGCCATAAGCTAC+TGG | + | chr1.3:56401435-56401454 | None:intergenic | 30.0% | |
| ATGACTAAAAAAGATCCGTT+TGG | - | chr1.3:56401340-56401359 | MS.gene005028:intron | 30.0% | |
| ATTCAAAAGGAGTAACAAAG+AGG | - | chr1.3:56401742-56401761 | MS.gene005028:intron | 30.0% | |
| ATTCCAAATTCTAAGTCACA+GGG | + | chr1.3:56401936-56401955 | None:intergenic | 30.0% | |
| CAGTAATTGATCACTAACAT+GGG | + | chr1.3:56401705-56401724 | None:intergenic | 30.0% | |
| CAGTTAATTCTTATCAGATG+AGG | + | chr1.3:56401783-56401802 | None:intergenic | 30.0% | |
| CATCATCGATCATGATAATA+AGG | - | chr1.3:56400996-56401015 | MS.gene005028:CDS | 30.0% | |
| CTGAACGTTCTTTAAATTTG+GGG | + | chr1.3:56401882-56401901 | None:intergenic | 30.0% | |
| GACTGAACGTTCTTTAAATT+TGG | + | chr1.3:56401884-56401903 | None:intergenic | 30.0% | |
| GTTAAGTCTCAAAGAAAACA+TGG | + | chr1.3:56402793-56402812 | None:intergenic | 30.0% | |
| GTTATATCTACACATGTTCA+TGG | - | chr1.3:56402216-56402235 | MS.gene005028:intron | 30.0% | |
| TAATAGCCATGGTAATTCAA+TGG | + | chr1.3:56402832-56402851 | None:intergenic | 30.0% | |
| TAGTGATCAATTACTGTTGA+TGG | - | chr1.3:56401709-56401728 | MS.gene005028:intron | 30.0% | |
| TGAACGTTCTTTAAATTTGG+GGG | + | chr1.3:56401881-56401900 | None:intergenic | 30.0% | |
| TGAGACTTAACGTATTGTTA+TGG | - | chr1.3:56402802-56402821 | MS.gene005028:intron | 30.0% | |
| TGATACTTAGTTGAAGTGTA+TGG | + | chr1.3:56401967-56401986 | None:intergenic | 30.0% | |
| TGATGTCAACTAAATGAGTA+AGG | - | chr1.3:56402594-56402613 | MS.gene005028:intron | 30.0% | |
| TGCAAAAGATATAATAGCCA+TGG | + | chr1.3:56402843-56402862 | None:intergenic | 30.0% | |
| TTCTTGAAGGAATAGAAGTT+AGG | - | chr1.3:56403667-56403686 | MS.gene005028:CDS | 30.0% | |
| TTTCAACAATAATAAGCCTC+AGG | + | chr1.3:56401035-56401054 | None:intergenic | 30.0% | |
| TTTCAATTGGAGAAAAAGAG+TGG | - | chr1.3:56401098-56401117 | MS.gene005028:CDS | 30.0% | |
| ! | AGCTAGCTTATAGCTAATAA+AGG | + | chr1.3:56401603-56401622 | None:intergenic | 30.0% |
| ! | CAGGATCGTTAACTAAATTT+TGG | + | chr1.3:56403103-56403122 | None:intergenic | 30.0% |
| ! | GAATCAAGCCATTATTGATT+AGG | - | chr1.3:56401270-56401289 | MS.gene005028:intron | 30.0% |
| ! | GATCGTTAACTAAATTTTGG+AGG | + | chr1.3:56403100-56403119 | None:intergenic | 30.0% |
| ! | TCATTTTCTCCCATACTTAA+AGG | + | chr1.3:56402982-56403001 | None:intergenic | 30.0% |
| ! | TGAAATGCAGAGTTTTCAAT+TGG | - | chr1.3:56401085-56401104 | MS.gene005028:CDS | 30.0% |
| !! | AGACAATTTTAGTACTACTC+TGG | + | chr1.3:56403458-56403477 | None:intergenic | 30.0% |
| !! | GTTTTTACTTTTAGTGTGAC+TGG | - | chr1.3:56402536-56402555 | MS.gene005028:intron | 30.0% |
| !!! | AGATAGAGATCTTTTTTGGT+AGG | + | chr1.3:56400955-56400974 | None:intergenic | 30.0% |
| !!! | AGCAAGATAGAGATCTTTTT+TGG | + | chr1.3:56400959-56400978 | None:intergenic | 30.0% |
| AAAATTCATAGCTACCACCT+CGG | - | chr1.3:56401848-56401867 | MS.gene005028:intron | 35.0% | |
| AAACGGACCCTAATCAATAA+TGG | + | chr1.3:56401281-56401300 | None:intergenic | 35.0% | |
| AACTTCATCCTTACACTATC+AGG | - | chr1.3:56402699-56402718 | MS.gene005028:intron | 35.0% | |
| AAGCCGCATATTGAGTATTT+GGG | + | chr1.3:56403359-56403378 | None:intergenic | 35.0% | |
| AAGCTAATTCCAGTAGCTTA+TGG | - | chr1.3:56401423-56401442 | MS.gene005028:intron | 35.0% | |
| AAGTCGATGTCCTTTAAGTA+TGG | - | chr1.3:56402969-56402988 | MS.gene005028:intron | 35.0% | |
| ACACTTATCATGAGAAAGTG+AGG | - | chr1.3:56402937-56402956 | MS.gene005028:intron | 35.0% | |
| AGAAAACGACAGTTACCAAA+CGG | + | chr1.3:56401358-56401377 | None:intergenic | 35.0% | |
| AGATGAATGTGATACAGACA+AGG | - | chr1.3:56403619-56403638 | MS.gene005028:CDS | 35.0% | |
| AGTCGATGTCCTTTAAGTAT+GGG | - | chr1.3:56402970-56402989 | MS.gene005028:intron | 35.0% | |
| ATGAATGTGATACAGACAAG+GGG | - | chr1.3:56403621-56403640 | MS.gene005028:CDS | 35.0% | |
| CAAATGTGTGTCTTACCAAA+CGG | + | chr1.3:56401298-56401317 | None:intergenic | 35.0% | |
| CATCGATCATGATAATAAGG+TGG | - | chr1.3:56400999-56401018 | MS.gene005028:CDS | 35.0% | |
| GATGAATGTGATACAGACAA+GGG | - | chr1.3:56403620-56403639 | MS.gene005028:CDS | 35.0% | |
| GATTCCAAATTCTAAGTCAC+AGG | + | chr1.3:56401937-56401956 | None:intergenic | 35.0% | |
| GATTGTCACAACATAAGAGT+TGG | + | chr1.3:56402888-56402907 | None:intergenic | 35.0% | |
| GTATGGGAGAAAATGAATGT+TGG | - | chr1.3:56402986-56403005 | MS.gene005028:intron | 35.0% | |
| TAAGCCGCATATTGAGTATT+TGG | + | chr1.3:56403360-56403379 | None:intergenic | 35.0% | |
| TACTTAGTTGAAGTGTATGG+AGG | + | chr1.3:56401964-56401983 | None:intergenic | 35.0% | |
| TAGATCTCTTGCCATTGTTT+GGG | - | chr1.3:56401145-56401164 | MS.gene005028:CDS | 35.0% | |
| TATCATGATCGATGATGACA+GGG | + | chr1.3:56400993-56401012 | None:intergenic | 35.0% | |
| TGGAGCAAATGTCAGAAAAT+GGG | + | chr1.3:56402448-56402467 | None:intergenic | 35.0% | |
| TGTCAACTAAATGAGTAAGG+AGG | - | chr1.3:56402597-56402616 | MS.gene005028:intron | 35.0% | |
| TTATCATGATCGATGATGAC+AGG | + | chr1.3:56400994-56401013 | None:intergenic | 35.0% | |
| TTGTCTGTATCACATTCATC+TGG | + | chr1.3:56403620-56403639 | None:intergenic | 35.0% | |
| ! | AGGAAAACTGATGATGTTCA+TGG | - | chr1.3:56402377-56402396 | MS.gene005028:intron | 35.0% |
| ! | ATTATTGATTAGGGTCCGTT+TGG | - | chr1.3:56401280-56401299 | MS.gene005028:intron | 35.0% |
| ! | CATCTTCTGTGTACTACTTT+TGG | - | chr1.3:56403254-56403273 | MS.gene005028:CDS | 35.0% |
| ! | TTTGAAATGAACAGTTGGCT+AGG | - | chr1.3:56402675-56402694 | MS.gene005028:intron | 35.0% |
| ! | TTTTGTGTTCCTAATTGCTG+CGG | - | chr1.3:56402085-56402104 | MS.gene005028:intron | 35.0% |
| !! | AATTACTGTTGATGGGTTCT+AGG | - | chr1.3:56401717-56401736 | MS.gene005028:intron | 35.0% |
| !! | ATTACTGTTGATGGGTTCTA+GGG | - | chr1.3:56401718-56401737 | MS.gene005028:intron | 35.0% |
| !! | GGTTGATAAATTAACAGTGC+AGG | + | chr1.3:56403122-56403141 | None:intergenic | 35.0% |
| AAATTCATAGCTACCACCTC+GGG | - | chr1.3:56401849-56401868 | MS.gene005028:intron | 40.0% | |
| ACTTCATCATTCAGGATAGC+AGG | - | chr1.3:56402345-56402364 | MS.gene005028:intron | 40.0% | |
| AGATCTCTTGCCATTGTTTG+GGG | - | chr1.3:56401146-56401165 | MS.gene005028:CDS | 40.0% | |
| AGCCGCATATTGAGTATTTG+GGG | + | chr1.3:56403358-56403377 | None:intergenic | 40.0% | |
| AGCTACAGAAGAAGGATCTT+GGG | + | chr1.3:56402032-56402051 | None:intergenic | 40.0% | |
| AGTTTACTAGGCCACATGTA+TGG | - | chr1.3:56402732-56402751 | MS.gene005028:intron | 40.0% | |
| ATTCCATACAGCGTCAGAAT+CGG | + | chr1.3:56400872-56400891 | None:intergenic | 40.0% | |
| CACAACATAAGAGTTGGAGT+TGG | + | chr1.3:56402882-56402901 | None:intergenic | 40.0% | |
| CATATTGAGTATTTGGGGAC+AGG | + | chr1.3:56403353-56403372 | None:intergenic | 40.0% | |
| CTAGATCTCTTGCCATTGTT+TGG | - | chr1.3:56401144-56401163 | MS.gene005028:CDS | 40.0% | |
| GAGTTAATCAAGAGCTAACC+TGG | + | chr1.3:56401213-56401232 | None:intergenic | 40.0% | |
| GGAATCCCATTGAATTACCA+TGG | - | chr1.3:56402823-56402842 | MS.gene005028:intron | 40.0% | |
| GGAGCAAATGTCAGAAAATG+GGG | + | chr1.3:56402447-56402466 | None:intergenic | 40.0% | |
| GGCCTAGTAAACTTCTACAT+AGG | + | chr1.3:56402725-56402744 | None:intergenic | 40.0% | |
| GGCCTATGTAGAAGTTTACT+AGG | - | chr1.3:56402720-56402739 | MS.gene005028:intron | 40.0% | |
| GTCCCCAAATACTCAATATG+CGG | - | chr1.3:56403353-56403372 | MS.gene005028:intron | 40.0% | |
| GTGGAGCAAATGTCAGAAAA+TGG | + | chr1.3:56402449-56402468 | None:intergenic | 40.0% | |
| GTTGACATCATAACTGATGC+AGG | + | chr1.3:56402584-56402603 | None:intergenic | 40.0% | |
| TGACCCTGTGACTTAGAATT+TGG | - | chr1.3:56401930-56401949 | MS.gene005028:intron | 40.0% | |
| TGTCGAGTACTTCATCATTC+AGG | - | chr1.3:56402337-56402356 | MS.gene005028:intron | 40.0% | |
| TGTCTGTTTGGATCCAAATG+TGG | - | chr1.3:56403473-56403492 | MS.gene005028:CDS | 40.0% | |
| TGTTTGGATCCAAATGTGGA+AGG | - | chr1.3:56403477-56403496 | MS.gene005028:CDS | 40.0% | |
| ! | AGGTGGTATTCTTTTTCCTG+AGG | - | chr1.3:56401016-56401035 | MS.gene005028:CDS | 40.0% |
| ! | TACATAGGCCTGATAGTGTA+AGG | + | chr1.3:56402710-56402729 | None:intergenic | 40.0% |
| !! | CATGGTCATCATTTTTGTCG+TGG | - | chr1.3:56402395-56402414 | MS.gene005028:intron | 40.0% |
| !! | CTAAGCTTGTTGATGTGTGT+TGG | - | chr1.3:56403295-56403314 | MS.gene005028:CDS | 40.0% |
| !! | GAGTAAGGAGGTTTTAGTCT+TGG | - | chr1.3:56402609-56402628 | MS.gene005028:intron | 40.0% |
| !! | GATTTATCAGTTGGTGTCGA+AGG | - | chr1.3:56403429-56403448 | MS.gene005028:intron | 40.0% |
| !! | GTGTGTTGGCTTGAAATTCA+TGG | - | chr1.3:56403309-56403328 | MS.gene005028:CDS | 40.0% |
| !! | TCTGTGTACTACTTTTGGAC+AGG | - | chr1.3:56403259-56403278 | MS.gene005028:CDS | 40.0% |
| !!! | ATCTTTTTTGGTAGGAGCGT+TGG | + | chr1.3:56400947-56400966 | None:intergenic | 40.0% |
| !!! | TAAGGAGGTTTTAGTCTTGG+CGG | - | chr1.3:56402612-56402631 | MS.gene005028:intron | 40.0% |
| AAGAGAGGTCTCGTTCTTGA+AGG | - | chr1.3:56403654-56403673 | MS.gene005028:CDS | 45.0% | |
| AATCCGAGTACTCTGTCATG+CGG | + | chr1.3:56403513-56403532 | None:intergenic | 45.0% | |
| AATGTGATACAGACAAGGGG+TGG | - | chr1.3:56403624-56403643 | MS.gene005028:CDS | 45.0% | |
| ACACCAACTGATAAATCCGC+AGG | + | chr1.3:56403426-56403445 | None:intergenic | 45.0% | |
| AGTTGTACGAGAGACTATGG+CGG | + | chr1.3:56400797-56400816 | None:intergenic | 45.0% | |
| ATGATGAGCGCTATTGGAAC+TGG | - | chr1.3:56401171-56401190 | MS.gene005028:intron | 45.0% | |
| ATGGGGGAGTTCTTCAATTC+GGG | - | chr1.3:56403576-56403595 | MS.gene005028:CDS | 45.0% | |
| ATGTCCAGTGTCCATACATG+TGG | + | chr1.3:56402746-56402765 | None:intergenic | 45.0% | |
| CAACAAGCTTAGCGACTTCA+GGG | + | chr1.3:56403287-56403306 | None:intergenic | 45.0% | |
| CAACTGATAAATCCGCAGGA+CGG | + | chr1.3:56403422-56403441 | None:intergenic | 45.0% | |
| CTCATCATCACCCCAAACAA+TGG | + | chr1.3:56401159-56401178 | None:intergenic | 45.0% | |
| GACAGAGATTCAGGATTTGC+CGG | - | chr1.3:56400759-56400778 | MS.gene005028:CDS | 45.0% | |
| GAGCTACAGAAGAAGGATCT+TGG | + | chr1.3:56402033-56402052 | None:intergenic | 45.0% | |
| GATGGGGGAGTTCTTCAATT+CGG | - | chr1.3:56403575-56403594 | MS.gene005028:CDS | 45.0% | |
| GCTACAGAAGAAGGATCTTG+GGG | + | chr1.3:56402031-56402050 | None:intergenic | 45.0% | |
| GGATTTCTATGCCTGATTCC+AGG | - | chr1.3:56401192-56401211 | MS.gene005028:intron | 45.0% | |
| TACAGACAAGGGGTGGTAAT+TGG | - | chr1.3:56403631-56403650 | MS.gene005028:CDS | 45.0% | |
| TCAACAAGCTTAGCGACTTC+AGG | + | chr1.3:56403288-56403307 | None:intergenic | 45.0% | |
| TCAAGAGCTAACCTGGAATC+AGG | + | chr1.3:56401206-56401225 | None:intergenic | 45.0% | |
| TCATCATTCAGGATAGCAGG+TGG | - | chr1.3:56402348-56402367 | MS.gene005028:intron | 45.0% | |
| TGGAGTTGTACGAGAGACTA+TGG | + | chr1.3:56400800-56400819 | None:intergenic | 45.0% | |
| TGGATCCAAATGTGGAAGGT+AGG | - | chr1.3:56403481-56403500 | MS.gene005028:CDS | 45.0% | |
| ! | ATCCTTCTTCTGTAGCTCTG+CGG | - | chr1.3:56402035-56402054 | MS.gene005028:intron | 45.0% |
| !! | TGGGTTCTAGGGCATTCAAA+AGG | - | chr1.3:56401729-56401748 | MS.gene005028:intron | 45.0% |
| !! | TTATCAGTTGGTGTCGAAGG+TGG | - | chr1.3:56403432-56403451 | MS.gene005028:intron | 45.0% |
| !! | ATATATATATATATATATAC+GGG | + | chr1.3:56403200-56403181 | None:intergenic | 5.0% |
| AACCGCAGAGCTACAGAAGA+AGG | + | chr1.3:56402040-56402059 | None:intergenic | 50.0% | |
| AATTTGGGGGTTTGAACCCG+AGG | + | chr1.3:56401868-56401887 | None:intergenic | 50.0% | |
| AGAAACGACAGAGTCTCTGC+CGG | + | chr1.3:56400830-56400849 | None:intergenic | 50.0% | |
| AGGATAGCAGGTGGTCTTTG+AGG | - | chr1.3:56402357-56402376 | MS.gene005028:intron | 50.0% | |
| AGGGGTGGTAATTGGAAGAG+AGG | - | chr1.3:56403639-56403658 | MS.gene005028:CDS | 50.0% | |
| AGTATTTGGGGACAGGACGA+TGG | + | chr1.3:56403346-56403365 | None:intergenic | 50.0% | |
| CGGAAGTTGGATGAAGAGCA+TGG | + | chr1.3:56402001-56402020 | None:intergenic | 50.0% | |
| CGTCCTGCGGATTTATCAGT+TGG | - | chr1.3:56403420-56403439 | MS.gene005028:intron | 50.0% | |
| CTCTTCATCCAACTTCCGCT+TGG | - | chr1.3:56402003-56402022 | MS.gene005028:intron | 50.0% | |
| GAGATTCAGGATTTGCCGGA+AGG | - | chr1.3:56400763-56400782 | MS.gene005028:CDS | 50.0% | |
| GGGTGGTTGGAGATTGAGAT+GGG | - | chr1.3:56403558-56403577 | MS.gene005028:CDS | 50.0% | |
| GGTGGTTGGAGATTGAGATG+GGG | - | chr1.3:56403559-56403578 | MS.gene005028:CDS | 50.0% | |
| GTCCTAGTGTGAGAAGCGAT+GGG | - | chr1.3:56403538-56403557 | MS.gene005028:CDS | 50.0% | |
| GTGGTTGGAGATTGAGATGG+GGG | - | chr1.3:56403560-56403579 | MS.gene005028:CDS | 50.0% | |
| TAGGCCACATGTATGGACAC+TGG | - | chr1.3:56402739-56402758 | MS.gene005028:intron | 50.0% | |
| TGGGTGGTTGGAGATTGAGA+TGG | - | chr1.3:56403557-56403576 | MS.gene005028:CDS | 50.0% | |
| AAGGATCTTGGGGCTCCAAG+CGG | + | chr1.3:56402021-56402040 | None:intergenic | 55.0% | |
| AGTACTCTGTCATGCGGCTG+CGG | + | chr1.3:56403507-56403526 | None:intergenic | 55.0% | |
| ATGGCGGCAATGCATCCTTC+CGG | + | chr1.3:56400781-56400800 | None:intergenic | 55.0% | |
| CACCCATCGCTTCTCACACT+AGG | + | chr1.3:56403543-56403562 | None:intergenic | 55.0% | |
| CCATACAGCGTCAGAATCGG+AGG | + | chr1.3:56400869-56400888 | None:intergenic | 55.0% | |
| CCTCCGATTCTGACGCTGTA+TGG | - | chr1.3:56400866-56400885 | MS.gene005028:CDS | 55.0% | |
| CGTCAGAATCGGAGGCTGAT+CGG | + | chr1.3:56400861-56400880 | None:intergenic | 55.0% | |
| CGTCCTAGTGTGAGAAGCGA+TGG | - | chr1.3:56403537-56403556 | MS.gene005028:CDS | 55.0% | |
| CTAGTGTGAGAAGCGATGGG+TGG | - | chr1.3:56403541-56403560 | MS.gene005028:CDS | 55.0% | |
| GGGATTTCTGAACCGTCCTG+CGG | - | chr1.3:56403407-56403426 | MS.gene005028:intron | 55.0% | |
| GTTCGGTTGCCGCAGCAATT+AGG | + | chr1.3:56402097-56402116 | None:intergenic | 55.0% | |
| TGCGGCCTACCTTCCACATT+TGG | + | chr1.3:56403489-56403508 | None:intergenic | 55.0% | |
| TGTGAGAAGCGATGGGTGGT+TGG | - | chr1.3:56403545-56403564 | MS.gene005028:CDS | 55.0% | |
| ! | CAGCCGCATGACAGAGTACT+CGG | - | chr1.3:56403507-56403526 | MS.gene005028:CDS | 55.0% |
| ! | GGGGTGATGATGAGCGCTAT+TGG | - | chr1.3:56401165-56401184 | MS.gene005028:intron | 55.0% |
| !! | GTAGGAGCGTTGGCGAGTAA+AGG | + | chr1.3:56400937-56400956 | None:intergenic | 55.0% |
| CGTACAACTCCACTCGACGC+CGG | - | chr1.3:56400808-56400827 | MS.gene005028:CDS | 60.0% | |
| TTGGGGCTCCAAGCGGAAGT+TGG | + | chr1.3:56402014-56402033 | None:intergenic | 60.0% | |
| TTGGGGGTTTGAACCCGAGG+TGG | + | chr1.3:56401865-56401884 | None:intergenic | 60.0% | |
| ! | GAGTCTCTGCCGGCGTCGAG+TGG | + | chr1.3:56400820-56400839 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 56400757 | 56403707 | 56400757 | ID=MS.gene005028 |
| chr1.3 | mRNA | 56400757 | 56403707 | 56400757 | ID=MS.gene005028.t1;Parent=MS.gene005028 |
| chr1.3 | exon | 56403447 | 56403707 | 56403447 | ID=MS.gene005028.t1.exon1;Parent=MS.gene005028.t1 |
| chr1.3 | CDS | 56403447 | 56403707 | 56403447 | ID=cds.MS.gene005028.t1;Parent=MS.gene005028.t1 |
| chr1.3 | exon | 56403251 | 56403369 | 56403251 | ID=MS.gene005028.t1.exon2;Parent=MS.gene005028.t1 |
| chr1.3 | CDS | 56403251 | 56403369 | 56403251 | ID=cds.MS.gene005028.t1;Parent=MS.gene005028.t1 |
| chr1.3 | exon | 56400757 | 56401183 | 56400757 | ID=MS.gene005028.t1.exon3;Parent=MS.gene005028.t1 |
| chr1.3 | CDS | 56400757 | 56401183 | 56400757 | ID=cds.MS.gene005028.t1;Parent=MS.gene005028.t1 |
| Gene Sequence |
| Protein sequence |