AlfalfaGEDB | MS.gene005552

M. sativa cultivar XinJiangDaYe / MS.gene005552

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF00646.36 PF14299.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene005552.t1	KEH32832.1	61.7	313	100	8	93	387	8	318	6.00E-90	341.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene005552.t1	Q9ZVQ6	39.6	288	140	5	101	385	14	270	4.1e-47	190.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene005552.t1	A0A072UT85	61.7	313	100	8	93	387	8	318	4.3e-90	341.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene94933	MS.gene005552	PPI
MS.gene74868	MS.gene005552	PPI
MS.gene059798	MS.gene005552	PPI
MS.gene005552	MS.gene005027	PPI
MS.gene005552	MS.gene74880	PPI
MS.gene49090	MS.gene005552	PPI
MS.gene005552	MS.gene43942	PPI
MS.gene74872	MS.gene005552	PPI
MS.gene07577	MS.gene005552	PPI
MS.gene005030	MS.gene005552	PPI
MS.gene009359	MS.gene005552	PPI
MS.gene005035	MS.gene005552	PPI
MS.gene24084	MS.gene005552	PPI
MS.gene005552	MS.gene006298	PPI
MS.gene005552	MS.gene49185	PPI
MS.gene51502	MS.gene005552	PPI
MS.gene07555	MS.gene005552	PPI
MS.gene005552	MS.gene74875	PPI
MS.gene63582	MS.gene005552	PPI
MS.gene49085	MS.gene005552	PPI
MS.gene67769	MS.gene005552	PPI
MS.gene67762	MS.gene005552	PPI
MS.gene07586	MS.gene005552	PPI
MS.gene34490	MS.gene005552	PPI
MS.gene88931	MS.gene005552	PPI
MS.gene07580	MS.gene005552	PPI
MS.gene74912	MS.gene005552	PPI
MS.gene74878	MS.gene005552	PPI
MS.gene07556	MS.gene005552	PPI
MS.gene51487	MS.gene005552	PPI
MS.gene005066	MS.gene005552	PPI
MS.gene000006	MS.gene005552	PPI
MS.gene74911	MS.gene005552	PPI
MS.gene74873	MS.gene005552	PPI
MS.gene41430	MS.gene005552	PPI
MS.gene49088	MS.gene005552	PPI
MS.gene005023	MS.gene005552	PPI
MS.gene005033	MS.gene005552	PPI
MS.gene74881	MS.gene005552	PPI
MS.gene005020	MS.gene005552	PPI
MS.gene74913	MS.gene005552	PPI
MS.gene058615	MS.gene005552	PPI
MS.gene005552	MS.gene069492	PPI
MS.gene49186	MS.gene005552	PPI
MS.gene005552	MS.gene34488	PPI
MS.gene07572	MS.gene005552	PPI
MS.gene005552	MS.gene04280	PPI
MS.gene74877	MS.gene005552	PPI
MS.gene74858	MS.gene005552	PPI
MS.gene07571	MS.gene005552	PPI
MS.gene005012	MS.gene005552	PPI
MS.gene43943	MS.gene005552	PPI
MS.gene07585	MS.gene005552	PPI
MS.gene52533	MS.gene005552	PPI
MS.gene95381	MS.gene005552	PPI
MS.gene51496	MS.gene005552	PPI
MS.gene005552	MS.gene96708	PPI
MS.gene005552	MS.gene74864	PPI
MS.gene058740	MS.gene005552	PPI
MS.gene41433	MS.gene005552	PPI
MS.gene006298	MS.gene005552	PPI
MS.gene005013	MS.gene005552	PPI
MS.gene07578	MS.gene005552	PPI
MS.gene005552	MS.gene006296	PPI
MS.gene74998	MS.gene005552	PPI
MS.gene07559	MS.gene005552	PPI
MS.gene07557	MS.gene005552	PPI
MS.gene52532	MS.gene005552	PPI
MS.gene005552	MS.gene068736	PPI
MS.gene74876	MS.gene005552	PPI
MS.gene07581	MS.gene005552	PPI
MS.gene41431	MS.gene005552	PPI
MS.gene74860	MS.gene005552	PPI
MS.gene27114	MS.gene005552	PPI
MS.gene74859	MS.gene005552	PPI
MS.gene005068	MS.gene005552	PPI
MS.gene74863	MS.gene005552	PPI
MS.gene07250	MS.gene005552	PPI
MS.gene005019	MS.gene005552	PPI
MS.gene005028	MS.gene005552	PPI
MS.gene52530	MS.gene005552	PPI
MS.gene49086	MS.gene005552	PPI
MS.gene07583	MS.gene005552	PPI
MS.gene005552	MS.gene005034	PPI
MS.gene74867	MS.gene005552	PPI
MS.gene006294	MS.gene005552	PPI
MS.gene07569	MS.gene005552	PPI
MS.gene068736	MS.gene005552	PPI
MS.gene005552	MS.gene005032	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene005552.t1	MTR_3g006850	62.460	309	96	8	97	387	12	318	1.21e-117	345
MS.gene005552.t1	MTR_1g100597	60.201	299	86	7	98	387	1	275	5.24e-111	326
MS.gene005552.t1	MTR_1g079460	59.122	296	88	5	98	387	1	269	5.90e-110	323
MS.gene005552.t1	MTR_1g079180	59.655	290	87	6	98	383	1	264	3.49e-108	318
MS.gene005552.t1	MTR_1g079370	58.681	288	93	5	98	383	1	264	1.71e-107	317
MS.gene005552.t1	MTR_1g079260	57.045	291	108	3	98	387	1	275	6.40e-107	316
MS.gene005552.t1	MTR_3g452600	56.849	292	100	4	96	387	5	270	2.18e-106	314
MS.gene005552.t1	MTR_1g079230	59.247	292	101	6	98	387	1	276	2.14e-105	312
MS.gene005552.t1	MTR_1g079200	57.292	288	96	4	98	383	1	263	3.01e-101	301
MS.gene005552.t1	MTR_1g079850	55.932	295	114	4	98	387	1	284	2.16e-97	291
MS.gene005552.t1	MTR_1g026510	53.000	300	117	5	98	387	1	286	1.89e-96	290
MS.gene005552.t1	MTR_1g079380	55.401	287	104	5	98	383	1	264	1.38e-95	288
MS.gene005552.t1	MTR_2g079100	55.102	294	96	6	96	385	4	265	1.59e-95	286
MS.gene005552.t1	MTR_1g079250	54.545	297	112	5	98	387	1	281	6.45e-94	283
MS.gene005552.t1	MTR_3g450990	51.623	308	107	7	96	387	5	286	2.12e-92	279
MS.gene005552.t1	MTR_1g100613	57.915	259	80	6	117	366	5	243	1.08e-90	273
MS.gene005552.t1	MTR_1g079350	52.381	294	112	8	98	383	1	274	1.17e-85	261
MS.gene005552.t1	MTR_1g079410	47.841	301	117	8	96	385	3	274	4.85e-74	231
MS.gene005552.t1	MTR_7g096300	51.812	276	98	5	98	368	1	246	1.03e-72	241
MS.gene005552.t1	MTR_1g079340	45.161	310	125	7	96	383	38	324	1.13e-68	219
MS.gene005552.t1	MTR_1g079140	44.595	296	148	6	101	383	13	305	2.41e-65	210
MS.gene005552.t1	MTR_1g079400	43.554	287	132	6	104	383	15	278	2.09e-60	197
MS.gene005552.t1	MTR_7g112550	41.156	294	138	12	104	383	10	282	3.24e-51	173
MS.gene005552.t1	MTR_1g076870	60.667	150	34	4	226	365	2	136	9.13e-51	167
MS.gene005552.t1	MTR_1g079350	62.937	143	49	1	98	236	1	143	3.71e-50	168
MS.gene005552.t1	MTR_1g078470	50.000	196	68	6	188	383	18	183	4.22e-49	164
MS.gene005552.t1	MTR_1g079240	46.341	205	68	5	183	383	12	178	7.97e-45	153
MS.gene005552.t1	MTR_1g083580	35.616	292	154	8	104	383	11	280	6.83e-43	151
MS.gene005552.t1	MTR_7g112560	36.972	284	144	9	104	383	4	256	4.34e-41	145
MS.gene005552.t1	MTR_4g023570	35.211	284	129	7	104	383	4	236	2.07e-36	133
MS.gene005552.t1	MTR_7g096310	57.724	123	46	2	163	283	44	162	5.11e-36	129
MS.gene005552.t1	MTR_2g042540	61.682	107	34	2	98	199	1	105	5.22e-35	125
MS.gene005552.t1	MTR_1g078460	67.778	90	28	1	95	183	61	150	2.53e-33	122
MS.gene005552.t1	MTR_1g079210	50.360	139	48	2	227	359	7	130	8.32e-32	117
MS.gene005552.t1	MTR_3g058640	48.780	123	40	2	226	348	7	106	2.24e-27	104
MS.gene005552.t1	MTR_1g079130	39.062	192	106	5	197	382	1	187	3.10e-26	104
MS.gene005552.t1	MTR_0113s0040	25.893	224	139	5	76	284	6	217	1.14e-12	68.2
MS.gene005552.t1	MTR_1g050352	51.899	79	34	3	123	198	46	123	3.88e-12	64.3
MS.gene005552.t1	MTR_1g079220	42.222	90	27	3	263	351	1	66	5.70e-12	61.2
MS.gene005552.t1	MTR_1g079190	73.171	41	11	0	336	376	134	174	1.37e-11	63.2
MS.gene005552.t1	MTR_7g103380	23.223	211	144	4	103	298	21	228	1.52e-11	65.1
MS.gene005552.t1	MTR_0002s0020	28.144	167	103	6	103	259	24	183	1.90e-11	64.7
MS.gene005552.t1	MTR_1g101390	30.822	146	89	6	103	242	30	169	7.77e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene005552.t1	AT2G02360	39.583	288	140	5	101	385	14	270	8.84e-59	192
MS.gene005552.t1	AT1G80110	43.110	283	129	7	104	384	4	256	2.48e-55	183
MS.gene005552.t1	AT2G02250	35.423	319	165	8	80	385	15	305	1.73e-52	177
MS.gene005552.t1	AT2G02340	37.063	286	155	7	103	384	38	302	1.22e-50	172
MS.gene005552.t1	AT2G02230	35.294	323	173	9	93	387	22	336	3.14e-49	169
MS.gene005552.t1	AT2G02240	37.716	289	149	7	101	387	61	320	5.18e-49	168
MS.gene005552.t1	AT2G02350	36.897	290	143	8	104	385	27	284	5.80e-47	162
MS.gene005552.t1	AT1G56240	37.458	299	146	8	104	383	4	280	7.33e-45	156
MS.gene005552.t1	AT2G02320	35.517	290	149	7	103	385	42	300	1.71e-41	148
MS.gene005552.t1	AT1G09155	36.455	299	149	9	104	383	3	279	2.41e-41	147
MS.gene005552.t1	AT2G02310	31.707	328	189	9	61	383	6	303	2.71e-41	147
MS.gene005552.t1	AT1G56250	36.301	292	159	8	104	383	4	280	3.44e-41	147
MS.gene005552.t1	AT2G02300	33.220	295	139	9	100	383	33	280	3.14e-35	131
MS.gene005552.t1	AT5G24560	36.649	191	101	7	101	283	3	181	7.75e-27	106
MS.gene005552.t1	AT2G02350	33.161	193	99	6	197	385	1	167	3.04e-21	90.5
MS.gene005552.t1	AT3G53000	24.183	306	195	9	90	386	10	287	2.09e-13	70.9
MS.gene005552.t1	AT3G61060	28.387	155	102	5	93	242	17	167	7.07e-13	68.9
MS.gene005552.t1	AT3G61060	29.032	155	100	6	93	242	17	166	4.03e-12	66.6
MS.gene005552.t1	AT1G12710	27.442	215	130	9	103	297	30	238	5.94e-12	66.2
MS.gene005552.t1	AT1G63090	26.471	204	123	9	103	287	28	223	3.46e-11	63.9

Find 95 sgRNAs with CRISPR-Local

Find 255 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGAAAGAATGGAAGCGTTTA+AGG	0.185860	1.4:-69858419	MS.gene005552:CDS
TAAGCCGCATACTTAGTATT+TGG	0.197924	1.4:+69857106	None:intergenic
GATTGATGCCCGTGGATTTA+AGG	0.214171	1.4:-69857068	MS.gene005552:CDS
TCAGCTTGATCCCCAGAATT+TGG	0.223014	1.4:+69859033	None:intergenic
GTGAAAGGATCGCCAAATTC+TGG	0.223753	1.4:-69859045	MS.gene005552:CDS
AGAGTGTGCCGTTTGTTAAA+AGG	0.297224	1.4:+69859799	None:intergenic
AAGCCGCATACTTAGTATTT+GGG	0.312044	1.4:+69857107	None:intergenic
TAATATTGCTCAATTGTCTT+TGG	0.317767	1.4:+69856706	None:intergenic
TTCTTCAAGGAATTGAAATT+AGG	0.324901	1.4:-69856733	MS.gene005552:CDS
TGCAACTGCTCCCACCAAAA+AGG	0.338766	1.4:-69858230	MS.gene005552:CDS
CGACAAAGCTTAGCAACTTC+AGG	0.342136	1.4:+69857178	None:intergenic
TTGCATTTATGTTTGCTGTT+TGG	0.355251	1.4:+69856932	None:intergenic
CCGCCAATTCCGACATTGTC+TGG	0.356049	1.4:-69858303	MS.gene005552:CDS
ACTCTAAGTTTGTGTTGATT+TGG	0.357610	1.4:+69860684	None:intergenic
TTAAATTAAGAGCTTTCAAT+TGG	0.371567	1.4:-69858033	MS.gene005552:intron
TTGTGGTGGTATGCCTCCTT+TGG	0.387149	1.4:-69857955	MS.gene005552:CDS
AAGGAAAATTTATTTCTTCA+AGG	0.390874	1.4:-69856746	MS.gene005552:CDS
TGATTTAGTCCGCCGCCTCC+TGG	0.394246	1.4:-69859775	MS.gene005552:intron
ATTCCAGACAATGTCGGAAT+TGG	0.394383	1.4:+69858300	None:intergenic
CAGCACAAAATTAGTTTGCT+TGG	0.396105	1.4:-69857002	MS.gene005552:CDS
GTCACGCAACAGAGGAAGAT+TGG	0.408515	1.4:-69856888	MS.gene005552:CDS
GGGAGTAGTACGAGAGAGTA+TGG	0.417136	1.4:+69858372	None:intergenic
GGATTCATATGCAAAATTCC+AGG	0.423893	1.4:-69857920	MS.gene005552:intron
AAATGCAAATGTGCTGCTCC+TGG	0.429928	1.4:-69856917	MS.gene005552:CDS
ATGGCGGCAATGCACCCTTC+CGG	0.431949	1.4:+69858391	None:intergenic
TATAGACTTCTTCATCTTCG+AGG	0.435124	1.4:+69856801	None:intergenic
CATCATCGACCATGCTGAAA+AGG	0.449564	1.4:-69858176	MS.gene005552:intron
TGAAAGGATCGCCAAATTCT+GGG	0.452162	1.4:-69859044	MS.gene005552:CDS
TTAGGATGAAATAGAAAGAA+TGG	0.455406	1.4:-69858431	MS.gene005552:intron
ATTGCTCAATTGTCTTTGGC+AGG	0.456017	1.4:+69856710	None:intergenic
CCAGACAATGTCGGAATTGG+CGG	0.468924	1.4:+69858303	None:intergenic
TGTGGTGGTATGCCTCCTTT+GGG	0.469234	1.4:-69857954	MS.gene005552:CDS
GGAGAGCCTGCCGACATCAA+TGG	0.470280	1.4:+69858351	None:intergenic
GAGAGCCTGCCGACATCAAT+GGG	0.479310	1.4:+69858352	None:intergenic
AATGTGCTGCTCCTGGGTGG+AGG	0.496605	1.4:-69856910	MS.gene005552:CDS
AGTTTGTGTTGATTTGGTTG+TGG	0.498373	1.4:+69860690	None:intergenic
CTGAGAGATGAATTGAGAAT+CGG	0.507894	1.4:+69858264	None:intergenic
GGAAGCGTTTAAGGAATTGC+CGG	0.507940	1.4:-69858410	MS.gene005552:CDS
CTACTCCCATTGATGTCGGC+AGG	0.508684	1.4:-69858357	MS.gene005552:CDS
TGGGTGGTTGGAGATTAAGA+TGG	0.512888	1.4:-69856843	MS.gene005552:CDS
TGTTGATTCAGCTGATGCTC+TGG	0.513547	1.4:-69859001	MS.gene005552:intron
AATTAGTTTGCTTGGAACGT+TGG	0.524348	1.4:-69856994	MS.gene005552:CDS
GACAAAGCTTAGCAACTTCA+GGG	0.524349	1.4:+69857179	None:intergenic
TCACGCAACAGAGGAAGATT+GGG	0.526207	1.4:-69856887	MS.gene005552:CDS
TCGTTGTAGTTGCTGGTGAA+AGG	0.527276	1.4:-69859060	MS.gene005552:intron
TCAGCTCCATCCTCGTACTT+CGG	0.527847	1.4:+69859565	None:intergenic
CGTCCTAGACTGAGAATCGA+TGG	0.531049	1.4:-69856863	MS.gene005552:CDS
TGTCGGAATTGGCGGCAGAA+AGG	0.538349	1.4:+69858311	None:intergenic
CTCCTTTGGGTGAGAAAGAG+TGG	0.539653	1.4:-69857941	MS.gene005552:CDS
ACTGAGAATCGATGGGTGGT+TGG	0.545507	1.4:-69856855	MS.gene005552:CDS
GGGTGGTTGGAGATTAAGAT+GGG	0.557041	1.4:-69856842	MS.gene005552:CDS
CTGTTGCGTGACCTCCACCC+AGG	0.557832	1.4:+69856899	None:intergenic
GAATATATACCAGGAGGCGG+CGG	0.564476	1.4:+69859766	None:intergenic
GTGGGAGCAGTTGCAAGGGA+AGG	0.565439	1.4:+69858238	None:intergenic
AAGTACGAGGATGGAGCTGA+TGG	0.571226	1.4:-69859562	MS.gene005552:CDS
GATGGAGCTGATGGTGAAGA+TGG	0.574138	1.4:-69859553	MS.gene005552:CDS
CGTTTAAGGAATTGCCGGAA+GGG	0.574247	1.4:-69858405	MS.gene005552:CDS
ACACCTGTGGAATTATCTGT+TGG	0.582883	1.4:-69857043	MS.gene005552:CDS
TGTTGTCGCTTGAAATTCGT+GGG	0.583600	1.4:-69857153	MS.gene005552:CDS
AGGTGTGTCCTTAAATCCAC+GGG	0.584864	1.4:+69857060	None:intergenic
GAATCACCGAAGTACGAGGA+TGG	0.587645	1.4:-69859571	MS.gene005552:CDS
GTTCGTTACATGAGCATCAG+TGG	0.588916	1.4:+69859522	None:intergenic
GCGTTTAAGGAATTGCCGGA+AGG	0.589082	1.4:-69858406	MS.gene005552:CDS
GTGTTGTCGCTTGAAATTCG+TGG	0.589403	1.4:-69857154	MS.gene005552:CDS
AGCCGCATACTTAGTATTTG+GGG	0.590667	1.4:+69857108	None:intergenic
CAGGTGTGTCCTTAAATCCA+CGG	0.596240	1.4:+69857059	None:intergenic
AATGCAAATGTGCTGCTCCT+GGG	0.598622	1.4:-69856916	MS.gene005552:CDS
CACCCATCGATTCTCAGTCT+AGG	0.600551	1.4:+69856860	None:intergenic
CGTACTACTCCCATTGATGT+CGG	0.602145	1.4:-69858361	MS.gene005552:CDS
TATGAATATATACCAGGAGG+CGG	0.603326	1.4:+69859763	None:intergenic
TTATCTGTTGGCATCGAAGG+TGG	0.603489	1.4:-69857031	MS.gene005552:CDS
GCTCTTACAATTGATTGTGG+TGG	0.605296	1.4:-69857969	MS.gene005552:CDS
TTTGGTGGGAGCAGTTGCAA+GGG	0.606846	1.4:+69858234	None:intergenic
GAATTATCTGTTGGCATCGA+AGG	0.606957	1.4:-69857034	MS.gene005552:CDS
CACTCTTTCTCACCCAAAGG+AGG	0.607143	1.4:+69857942	None:intergenic
GAGATGAATTGAGAATCGGC+AGG	0.608698	1.4:+69858268	None:intergenic
ATACTTAGTATTTGGGGACA+AGG	0.620406	1.4:+69857114	None:intergenic
ATCCACTCTTTCTCACCCAA+AGG	0.620685	1.4:+69857939	None:intergenic
ATGCCAACAGATAATTCCAC+AGG	0.623807	1.4:+69857040	None:intergenic
AATTCTGGGGATCAAGCTGA+AGG	0.631926	1.4:-69859030	MS.gene005552:CDS
GTCCCCAAATACTAAGTATG+CGG	0.633956	1.4:-69857110	MS.gene005552:CDS
TGGATTTAAGGACACACCTG+TGG	0.636153	1.4:-69857056	MS.gene005552:CDS
AGAGCTCTTACAATTGATTG+TGG	0.636596	1.4:-69857972	MS.gene005552:CDS
GGGTGGAGGTCACGCAACAG+AGG	0.641022	1.4:-69856896	MS.gene005552:CDS
GCAAATGTGCTGCTCCTGGG+TGG	0.641964	1.4:-69856913	MS.gene005552:CDS
GTCCTAGACTGAGAATCGAT+GGG	0.647735	1.4:-69856862	MS.gene005552:CDS
GAAAGGATCGCCAAATTCTG+GGG	0.652151	1.4:-69859043	MS.gene005552:CDS
AGATGAATTGAGAATCGGCA+GGG	0.656461	1.4:+69858269	None:intergenic
TTGGCTTCAACGAACAAACG+TGG	0.658388	1.4:+69856951	None:intergenic
TTTAAGATGATTGATGCCCG+TGG	0.665208	1.4:-69857076	MS.gene005552:CDS
GAAAGAATCACCGAAGTACG+AGG	0.675584	1.4:-69859575	MS.gene005552:CDS
TGTGCCGTTTGTTAAAAGGA+TGG	0.677328	1.4:+69859803	None:intergenic
AAAATGATTCCAGACAATGT+CGG	0.677420	1.4:+69858294	None:intergenic
CTAGACTGAGAATCGATGGG+TGG	0.692725	1.4:-69856859	MS.gene005552:CDS
AGTAGTACGAGAGAGTATGG+CGG	0.791363	1.4:+69858375	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTAATTTTGAAAAATGAAT+TGG	+	chr1.4:69858702-69858721	None:intergenic	10.0%
!!	AAAAAACAAGATATTAATCT+AGG	+	chr1.4:69858296-69858315	None:intergenic	15.0%
!!	ATGAAATAAGATCTTAATTT+AGG	+	chr1.4:69857829-69857848	None:intergenic	15.0%
!!	CAACATAAAATATAAATACA+AGG	-	chr1.4:69858837-69858856	MS.gene005552:intron	15.0%
!!	TATATTGTAAGACTAAATTA+GGG	+	chr1.4:69857213-69857232	None:intergenic	15.0%
!!	TGAAAAAAATAGATTGTTAT+GGG	+	chr1.4:69858801-69858820	None:intergenic	15.0%
!!	TTATATTGTAAGACTAAATT+AGG	+	chr1.4:69857214-69857233	None:intergenic	15.0%
!!	TTGAAAAAAATAGATTGTTA+TGG	+	chr1.4:69858802-69858821	None:intergenic	15.0%
!!!	AAATTTAAGACATTTATCTA+TGG	+	chr1.4:69859773-69859792	None:intergenic	15.0%
!!!	AATGTGTATATGTTATTTTA+TGG	-	chr1.4:69857731-69857750	MS.gene005552:intron	15.0%
!!!	ATGTGTATATGTTATTTTAT+GGG	-	chr1.4:69857732-69857751	MS.gene005552:intron	15.0%
!!!	TATCTTTATTTAGATATAAC+TGG	+	chr1.4:69858028-69858047	None:intergenic	15.0%
!!	AAAACAAATTTAGAAACAGT+CGG	+	chr1.4:69857803-69857822	None:intergenic	20.0%
!!	AAATAGAGTAAAATGTGTAT+AGG	-	chr1.4:69858115-69858134	MS.gene005552:intron	20.0%
!!	AAGAATAAAGGTTTCAAAAT+TGG	+	chr1.4:69858981-69859000	None:intergenic	20.0%
!!	AATTTCATTGAGAAATATGA+AGG	-	chr1.4:69856864-69856883	MS.gene005552:CDS	20.0%
!!	ACAAGTGATAATTAAAACTA+CGG	+	chr1.4:69857182-69857201	None:intergenic	20.0%
!!	AGTCATGAAATTAGATAAAT+GGG	+	chr1.4:69857058-69857077	None:intergenic	20.0%
!!	CCAAATTATTATTACCAAAA+AGG	-	chr1.4:69857409-69857428	MS.gene005552:intron	20.0%
!!	TACATATATGAATATATACC+AGG	+	chr1.4:69857683-69857702	None:intergenic	20.0%
!!	TAGTCATGAAATTAGATAAA+TGG	+	chr1.4:69857059-69857078	None:intergenic	20.0%
!!	TATTCATATATGTATTTGCA+AGG	-	chr1.4:69857689-69857708	MS.gene005552:intron	20.0%
!!	TGATAAACTTCTCAATTAAT+AGG	+	chr1.4:69860063-69860082	None:intergenic	20.0%
!!	TTAAATTAAGAGCTTTCAAT+TGG	-	chr1.4:69859404-69859423	MS.gene005552:intron	20.0%
!!	TTTATTAAAAACTAGCAGAA+AGG	+	chr1.4:69858906-69858925	None:intergenic	20.0%
!!!	AAATGTCATTTTTCATTTCA+AGG	-	chr1.4:69859841-69859860	MS.gene005552:intron	20.0%
!!!	AAGGAAAATTTATTTCTTCA+AGG	-	chr1.4:69860691-69860710	MS.gene005552:CDS	20.0%
!!!	AATCGATTTCTCTTATATTA+TGG	-	chr1.4:69859297-69859316	MS.gene005552:intron	20.0%
!!!	AATGTCATTTTTCATTTCAA+GGG	-	chr1.4:69859842-69859861	MS.gene005552:intron	20.0%
!!!	ATTTTACTCTTAGTTTTAGA+AGG	-	chr1.4:69857139-69857158	MS.gene005552:CDS	20.0%
!!!	CCTTTTTGGTAATAATAATT+TGG	+	chr1.4:69857412-69857431	None:intergenic	20.0%
!!!	GTTTTAGATAAGTTGTAATT+AGG	-	chr1.4:69856992-69857011	MS.gene005552:CDS	20.0%
!!!	TATGAAAACAAACTATCTTT+TGG	-	chr1.4:69858750-69858769	MS.gene005552:intron	20.0%
!!!	TCTTAAAACTAAATAGCTTT+TGG	+	chr1.4:69859347-69859366	None:intergenic	20.0%
!!!	TGATATTAAGGTTTAGTTTA+AGG	+	chr1.4:69859987-69860006	None:intergenic	20.0%
!!!	TGTATAGTATAGTTAACTTT+TGG	+	chr1.4:69859964-69859983	None:intergenic	20.0%
!!!	TTCTTTAGAAATGTAAGAAT+CGG	-	chr1.4:69856800-69856819	MS.gene005552:CDS	20.0%
!!!	TTTGATTTGTTAAAATGAGA+GGG	+	chr1.4:69857109-69857128	None:intergenic	20.0%
!	AAAAATGAATTGGATTGCTA+AGG	+	chr1.4:69858692-69858711	None:intergenic	25.0%
!	AAAATGAATTGGATTGCTAA+GGG	+	chr1.4:69858691-69858710	None:intergenic	25.0%
!	AACCTTTATTCTTTCTTCTT+AGG	-	chr1.4:69858988-69859007	MS.gene005552:intron	25.0%
!	AAGAATATAGAGAGAATTAC+TGG	+	chr1.4:69856785-69856804	None:intergenic	25.0%
!	AGATGACTATGAATATGATT+AGG	-	chr1.4:69857755-69857774	MS.gene005552:intron	25.0%
!	ATATATGAATATATACCAGG+AGG	+	chr1.4:69857680-69857699	None:intergenic	25.0%
!	ATCCTAAGAAGAAAGAATAA+AGG	+	chr1.4:69858993-69859012	None:intergenic	25.0%
!	ATGATACACAAATACCAAAA+TGG	-	chr1.4:69857247-69857266	MS.gene005552:intron	25.0%
!	ATTACCAAAAAGGTTACATA+AGG	-	chr1.4:69857419-69857438	MS.gene005552:intron	25.0%
!	GATGACTATGAATATGATTA+GGG	-	chr1.4:69857756-69857775	MS.gene005552:intron	25.0%
!	GTAAAACTTTATGTTCTATG+TGG	+	chr1.4:69857291-69857310	None:intergenic	25.0%
!	TGAAATACTTTAGTTATGCT+TGG	-	chr1.4:69860097-69860116	MS.gene005552:intron	25.0%
!	TGATTCCATATTGTTCATTT+AGG	-	chr1.4:69857603-69857622	MS.gene005552:intron	25.0%
!	TGTAACCTAAATGAACAATA+TGG	+	chr1.4:69857611-69857630	None:intergenic	25.0%
!	TTAGGATGAAATAGAAAGAA+TGG	-	chr1.4:69859006-69859025	MS.gene005552:CDS	25.0%
!	TTATTAGAAACCTATAATCG+AGG	+	chr1.4:69858322-69858341	None:intergenic	25.0%
!!	AAGCATCAAATCAGATTTTT+AGG	+	chr1.4:69858070-69858089	None:intergenic	25.0%
!!	ATCACACTCAACATATTTTA+TGG	-	chr1.4:69859666-69859685	MS.gene005552:intron	25.0%
!!	TCACACTCAACATATTTTAT+GGG	-	chr1.4:69859667-69859686	MS.gene005552:intron	25.0%
!!	TCTTTAGAAATGTAAGAATC+GGG	-	chr1.4:69856801-69856820	MS.gene005552:CDS	25.0%
!!!	CTTCTAAGTTAACTACTTTT+TGG	-	chr1.4:69858649-69858668	MS.gene005552:intron	25.0%
!!!	GTTTGATTTGTTAAAATGAG+AGG	+	chr1.4:69857110-69857129	None:intergenic	25.0%
!!!	TAAGTTAACTACTTTTTGGT+TGG	-	chr1.4:69858653-69858672	MS.gene005552:intron	25.0%
	AAAATGATTCCAGACAATGT+CGG	+	chr1.4:69859146-69859165	None:intergenic	30.0%
	AAACTTTATGTTCTATGTGG+TGG	+	chr1.4:69857288-69857307	None:intergenic	30.0%
	AAAGTGAGAGAAGTTCAAAA+TGG	+	chr1.4:69859893-69859912	None:intergenic	30.0%
	AACTTTATGTTCTATGTGGT+GGG	+	chr1.4:69857287-69857306	None:intergenic	30.0%
	AATCAAAACATGTGGATAGA+CGG	-	chr1.4:69858866-69858885	MS.gene005552:intron	30.0%
	ACTTATTACGCAAATTTGAC+AGG	-	chr1.4:69860233-69860252	MS.gene005552:intron	30.0%
	AGAAAATCACTCCAAAATTG+TGG	+	chr1.4:69858252-69858271	None:intergenic	30.0%
	AGATAACGCTAATAAGCATT+GGG	-	chr1.4:69859377-69859396	MS.gene005552:intron	30.0%
	ATAATTAAAACTACGGTAGG+AGG	+	chr1.4:69857175-69857194	None:intergenic	30.0%
	ATTAATTTCGTTGTAGTTGC+TGG	-	chr1.4:69858370-69858389	MS.gene005552:CDS	30.0%
	CGATAAAGAGAATTATCAGA+CGG	+	chr1.4:69860024-69860043	None:intergenic	30.0%
	CTAAACCTTAATATCAGTCA+TGG	-	chr1.4:69859991-69860010	MS.gene005552:intron	30.0%
	CTACTACTATAAAACCCTAA+AGG	-	chr1.4:69857442-69857461	MS.gene005552:intron	30.0%
	GAAAAAGAGTAGTGAGATAA+AGG	-	chr1.4:69860672-69860691	MS.gene005552:intron	30.0%
	GAAAATCACTCCAAAATTGT+GGG	+	chr1.4:69858251-69858270	None:intergenic	30.0%
	GCTTATCATTGAATTGATTG+TGG	-	chr1.4:69859319-69859338	MS.gene005552:intron	30.0%
	GGAAATACAATCAAAACATG+TGG	-	chr1.4:69858858-69858877	MS.gene005552:intron	30.0%
	GTAAATGAGTCTTAGTTAAG+TGG	+	chr1.4:69856906-69856925	None:intergenic	30.0%
	GTGATAATTAAAACTACGGT+AGG	+	chr1.4:69857178-69857197	None:intergenic	30.0%
	TAAGACATTTATCTATGGCA+TGG	+	chr1.4:69859768-69859787	None:intergenic	30.0%
	TAGAAACTTAAAAGCTAACC+TGG	+	chr1.4:69859538-69859557	None:intergenic	30.0%
	TAGATAACGCTAATAAGCAT+TGG	-	chr1.4:69859376-69859395	MS.gene005552:intron	30.0%
	TAGGATCAATCAACAAACAT+AGG	+	chr1.4:69859710-69859729	None:intergenic	30.0%
	TCAAGGGATATAAAGTTGAA+TGG	-	chr1.4:69859858-69859877	MS.gene005552:intron	30.0%
	TCGATTCTCTTAAAATGAGA+AGG	-	chr1.4:69859795-69859814	MS.gene005552:CDS	30.0%
	TTAAAAACTAGCAGAAAGGT+AGG	+	chr1.4:69858902-69858921	None:intergenic	30.0%
	TTCACTTAGAAGGAAAAATG+AGG	+	chr1.4:69859918-69859937	None:intergenic	30.0%
	TTTCAATTGGACAAAAAGAG+TGG	-	chr1.4:69859417-69859436	MS.gene005552:intron	30.0%
!	AAACTAATTTTGTGCTGCAA+CGG	+	chr1.4:69860432-69860451	None:intergenic	30.0%
!	CATAGCTGAACAATGTTTTT+GGG	+	chr1.4:69858517-69858536	None:intergenic	30.0%
!	TAGGAGTAAGTTAACCATTT+TGG	+	chr1.4:69857264-69857283	None:intergenic	30.0%
!	TCATAGCTGAACAATGTTTT+TGG	+	chr1.4:69858518-69858537	None:intergenic	30.0%
!	TCTTATTTCATTGTAGTTGC+TGG	-	chr1.4:69857838-69857857	MS.gene005552:intron	30.0%
!!	ACAAGAAGTATTCACTTAGA+AGG	+	chr1.4:69859928-69859947	None:intergenic	30.0%
!!	ACTCTAAGTTTGTGTTGATT+TGG	+	chr1.4:69856756-69856775	None:intergenic	30.0%
!!	AGATTTTTAGGAGATCTGTT+CGG	+	chr1.4:69858058-69858077	None:intergenic	30.0%
!!	TTGCATTTATGTTTGCTGTT+TGG	+	chr1.4:69860508-69860527	None:intergenic	30.0%
!!!	AAAGGAATGTTTTAGAAACG+AGG	+	chr1.4:69859111-69859130	None:intergenic	30.0%
!!!	AAGGAATGTTTTAGAAACGA+GGG	+	chr1.4:69859110-69859129	None:intergenic	30.0%
!!!	GTTTTTTACACCTCGATTAT+AGG	-	chr1.4:69858309-69858328	MS.gene005552:CDS	30.0%
	AAAAAAATTCCTTGCTCAGG+GGG	+	chr1.4:69859734-69859753	None:intergenic	35.0%
	AACCTTAATATCAGTCATGG+TGG	-	chr1.4:69859994-69860013	MS.gene005552:intron	35.0%
	AAGCCGCATACTTAGTATTT+GGG	+	chr1.4:69860333-69860352	None:intergenic	35.0%
	AATTGTGCAATGGAACAATG+AGG	+	chr1.4:69858550-69858569	None:intergenic	35.0%
	AGAGCTCTTACAATTGATTG+TGG	-	chr1.4:69859465-69859484	MS.gene005552:intron	35.0%
	AGTAGATACACTAACAATGC+AGG	+	chr1.4:69860152-69860171	None:intergenic	35.0%
	ATACTTAGTATTTGGGGACA+AGG	+	chr1.4:69860326-69860345	None:intergenic	35.0%
	ATCAAAACATGTGGATAGAC+GGG	-	chr1.4:69858867-69858886	MS.gene005552:intron	35.0%
	ATTCTGACCATAAGTGCATT+TGG	-	chr1.4:69858223-69858242	MS.gene005552:CDS	35.0%
	CAATGCATGCTACATATTGT+TGG	-	chr1.4:69858571-69858590	MS.gene005552:intron	35.0%
	CACAGAGGTAGTATTCATAA+AGG	+	chr1.4:69859636-69859655	None:intergenic	35.0%
	CATGCATTGTAATTGTGCAA+TGG	+	chr1.4:69858560-69858579	None:intergenic	35.0%
	CGAAAAAAATTCCTTGCTCA+GGG	+	chr1.4:69859736-69859755	None:intergenic	35.0%
	CTGAGAGATGAATTGAGAAT+CGG	+	chr1.4:69859176-69859195	None:intergenic	35.0%
	GAAAAAAATTCCTTGCTCAG+GGG	+	chr1.4:69859735-69859754	None:intergenic	35.0%
	GGATTCATATGCAAAATTCC+AGG	-	chr1.4:69859517-69859536	MS.gene005552:intron	35.0%
	TAAAGAGAATTATCAGACGG+TGG	+	chr1.4:69860021-69860040	None:intergenic	35.0%
	TAAGCCGCATACTTAGTATT+TGG	+	chr1.4:69860334-69860353	None:intergenic	35.0%
	TACTACCTCTGTGAATCAAA+TGG	-	chr1.4:69859643-69859662	MS.gene005552:intron	35.0%
	TATAGACTTCTTCATCTTCG+AGG	+	chr1.4:69860639-69860658	None:intergenic	35.0%
	TATGAATATATACCAGGAGG+CGG	+	chr1.4:69857677-69857696	None:intergenic	35.0%
	TCGAAAAAAATTCCTTGCTC+AGG	+	chr1.4:69859737-69859756	None:intergenic	35.0%
	TGGGAGGGTAAAAATGATTA+TGG	-	chr1.4:69858158-69858177	MS.gene005552:intron	35.0%
	TTTGATGCTTGCACAAGATT+TGG	-	chr1.4:69858080-69858099	MS.gene005552:intron	35.0%
!	AGCACCATCCTTTTAACAAA+CGG	-	chr1.4:69857630-69857649	MS.gene005552:intron	35.0%
!	CAAAGAATACCTTTTCAGCA+TGG	+	chr1.4:69859273-69859292	None:intergenic	35.0%
!	CATTCAACTCGTTTTCAACA+AGG	+	chr1.4:69857715-69857734	None:intergenic	35.0%
!!	AATTAGTTTGCTTGGAACGT+TGG	-	chr1.4:69860443-69860462	MS.gene005552:intron	35.0%
!!	AGAAAGAATGGAAGCGTTTA+AGG	-	chr1.4:69859018-69859037	MS.gene005552:CDS	35.0%
!!	AGTTTGTGTTGATTTGGTTG+TGG	+	chr1.4:69856750-69856769	None:intergenic	35.0%
!!	CAGCACAAAATTAGTTTGCT+TGG	-	chr1.4:69860435-69860454	MS.gene005552:intron	35.0%
!!!	CTGAACAATGTTTTTGGGTT+TGG	+	chr1.4:69858512-69858531	None:intergenic	35.0%
!!!	GTAGCCTTATGTAACCTTTT+TGG	+	chr1.4:69857426-69857445	None:intergenic	35.0%
	ACACCTGTGGAATTATCTGT+TGG	-	chr1.4:69860394-69860413	MS.gene005552:intron	40.0%
	ACATGTGAGACAAACAGAGA+TGG	-	chr1.4:69856924-69856943	MS.gene005552:CDS	40.0%
	AGATGAATTGAGAATCGGCA+GGG	+	chr1.4:69859171-69859190	None:intergenic	40.0%
	AGCCGCATACTTAGTATTTG+GGG	+	chr1.4:69860332-69860351	None:intergenic	40.0%
	ATGCCAACAGATAATTCCAC+AGG	+	chr1.4:69860400-69860419	None:intergenic	40.0%
	ATTCCAGACAATGTCGGAAT+TGG	+	chr1.4:69859140-69859159	None:intergenic	40.0%
	CAGGCTCATCAACTAAAATC+CGG	+	chr1.4:69860133-69860152	None:intergenic	40.0%
	CATGTGAGACAAACAGAGAT+GGG	-	chr1.4:69856925-69856944	MS.gene005552:CDS	40.0%
	GACAAAGCTTAGCAACTTCA+GGG	+	chr1.4:69860261-69860280	None:intergenic	40.0%
	GACCACCATGACTGATATTA+AGG	+	chr1.4:69859999-69860018	None:intergenic	40.0%
	GCTCTTACAATTGATTGTGG+TGG	-	chr1.4:69859468-69859487	MS.gene005552:intron	40.0%
	GTCCCCAAATACTAAGTATG+CGG	-	chr1.4:69860327-69860346	MS.gene005552:intron	40.0%
	GTGATCCATTTGATTCACAG+AGG	+	chr1.4:69859651-69859670	None:intergenic	40.0%
	TCTTAAAATGAGAAGGCTGC+AGG	-	chr1.4:69859802-69859821	MS.gene005552:CDS	40.0%
	TGAAAGGATCGCCAAATTCT+GGG	-	chr1.4:69858393-69858412	MS.gene005552:CDS	40.0%
!	AAAACTACGGTAGGAGGTTT+TGG	+	chr1.4:69857169-69857188	None:intergenic	40.0%
!	AAACTACGGTAGGAGGTTTT+GGG	+	chr1.4:69857168-69857187	None:intergenic	40.0%
!	GAATTATCTGTTGGCATCGA+AGG	-	chr1.4:69860403-69860422	MS.gene005552:intron	40.0%
!	TGTGTGTTACTGCACCTTTA+GGG	+	chr1.4:69857459-69857478	None:intergenic	40.0%
!	TGTTGTCGCTTGAAATTCGT+GGG	-	chr1.4:69860284-69860303	MS.gene005552:intron	40.0%
!	TTTAAGATGATTGATGCCCG+TGG	-	chr1.4:69860361-69860380	MS.gene005552:intron	40.0%
!!	AGAGTGTGCCGTTTGTTAAA+AGG	+	chr1.4:69857641-69857660	None:intergenic	40.0%
!!	AGATAGAGAGCCTTTTTGGT+GGG	+	chr1.4:69859220-69859239	None:intergenic	40.0%
!!	ATGAAAGTGCCTTTGAGAGA+GGG	+	chr1.4:69857560-69857579	None:intergenic	40.0%
!!	GCATTTGGTTCCCACAATTT+TGG	-	chr1.4:69858238-69858257	MS.gene005552:CDS	40.0%
!!	TATGCTTGGTGTACAACTTC+CGG	-	chr1.4:69860111-69860130	MS.gene005552:intron	40.0%
!!	TGTGCCGTTTGTTAAAAGGA+TGG	+	chr1.4:69857637-69857656	None:intergenic	40.0%
!!	TTATGTTCTATGTGGTGGGT+AGG	+	chr1.4:69857283-69857302	None:intergenic	40.0%
!!!	GTTTTTGGGTTTGGAGTCTA+TGG	+	chr1.4:69858503-69858522	None:intergenic	40.0%
	AGGTGTGTCCTTAAATCCAC+GGG	+	chr1.4:69860380-69860399	None:intergenic	45.0%
	ATCCACTCTTTCTCACCCAA+AGG	+	chr1.4:69859501-69859520	None:intergenic	45.0%
	ATCCTCATTGTAGCTGGAGT+TGG	-	chr1.4:69857525-69857544	MS.gene005552:intron	45.0%
	CAGGTGTGTCCTTAAATCCA+CGG	+	chr1.4:69860381-69860400	None:intergenic	45.0%
	CATCATCGACCATGCTGAAA+AGG	-	chr1.4:69859261-69859280	MS.gene005552:intron	45.0%
	CGACAAAGCTTAGCAACTTC+AGG	+	chr1.4:69860262-69860281	None:intergenic	45.0%
	CGTACTACTCCCATTGATGT+CGG	-	chr1.4:69859076-69859095	MS.gene005552:intron	45.0%
	CGTTTAAGGAATTGCCGGAA+GGG	-	chr1.4:69859032-69859051	MS.gene005552:CDS	45.0%
	CTGATGCTCATGTAACGAAC+TGG	-	chr1.4:69857918-69857937	MS.gene005552:intron	45.0%
	GAAAGAATCACCGAAGTACG+AGG	-	chr1.4:69857862-69857881	MS.gene005552:intron	45.0%
	GAAAGGATCGCCAAATTCTG+GGG	-	chr1.4:69858394-69858413	MS.gene005552:CDS	45.0%
	GAGATGAATTGAGAATCGGC+AGG	+	chr1.4:69859172-69859191	None:intergenic	45.0%
	GATTGATGCCCGTGGATTTA+AGG	-	chr1.4:69860369-69860388	MS.gene005552:intron	45.0%
	GCTCATGTAACGAACTGGTT+TGG	-	chr1.4:69857923-69857942	MS.gene005552:CDS	45.0%
	GGATCTCGGAAATCCCTATT+CGG	+	chr1.4:69857509-69857528	None:intergenic	45.0%
	GGGTGGTTGGAGATTAAGAT+GGG	-	chr1.4:69860595-69860614	MS.gene005552:intron	45.0%
	GTCCTAGACTGAGAATCGAT+GGG	-	chr1.4:69860575-69860594	MS.gene005552:intron	45.0%
	GTGAAAGGATCGCCAAATTC+TGG	-	chr1.4:69858392-69858411	MS.gene005552:CDS	45.0%
	GTGGGAACCAAATGCACTTA+TGG	+	chr1.4:69858233-69858252	None:intergenic	45.0%
	GTTCGTTACATGAGCATCAG+TGG	+	chr1.4:69857918-69857937	None:intergenic	45.0%
	TACCAACTCCAGCTACAATG+AGG	+	chr1.4:69857530-69857549	None:intergenic	45.0%
	TCACGCAACAGAGGAAGATT+GGG	-	chr1.4:69860550-69860569	MS.gene005552:intron	45.0%
	TCAGCTTGATCCCCAGAATT+TGG	+	chr1.4:69858407-69858426	None:intergenic	45.0%
	TCCAGCTACAATGAGGATCT+CGG	+	chr1.4:69857523-69857542	None:intergenic	45.0%
	TCGTTGTAGTTGCTGGTGAA+AGG	-	chr1.4:69858377-69858396	MS.gene005552:CDS	45.0%
	TGGATTTAAGGACACACCTG+TGG	-	chr1.4:69860381-69860400	MS.gene005552:intron	45.0%
	TGGGTGGTTGGAGATTAAGA+TGG	-	chr1.4:69860594-69860613	MS.gene005552:intron	45.0%
	TTGGCTTCAACGAACAAACG+TGG	+	chr1.4:69860489-69860508	None:intergenic	45.0%
!	AAATGCAAATGTGCTGCTCC+TGG	-	chr1.4:69860520-69860539	MS.gene005552:intron	45.0%
!	AATGCAAATGTGCTGCTCCT+GGG	-	chr1.4:69860521-69860540	MS.gene005552:intron	45.0%
!	AATTCTGGGGATCAAGCTGA+AGG	-	chr1.4:69858407-69858426	MS.gene005552:CDS	45.0%
!	AGCGAGATAGAGAGCCTTTT+TGG	+	chr1.4:69859224-69859243	None:intergenic	45.0%
!	AGTAGTACGAGAGAGTATGG+CGG	+	chr1.4:69859065-69859084	None:intergenic	45.0%
!	AGTCTATGGCTTTTCGTGAC+GGG	+	chr1.4:69858489-69858508	None:intergenic	45.0%
!	GAGATAGAGAGCCTTTTTGG+TGG	+	chr1.4:69859221-69859240	None:intergenic	45.0%
!	GAGTCTATGGCTTTTCGTGA+CGG	+	chr1.4:69858490-69858509	None:intergenic	45.0%
!	GTGTGTGTTACTGCACCTTT+AGG	+	chr1.4:69857460-69857479	None:intergenic	45.0%
!	GTGTTGTCGCTTGAAATTCG+TGG	-	chr1.4:69860283-69860302	MS.gene005552:intron	45.0%
!	TGGTTTGGATTATGCAGGTC+GGG	-	chr1.4:69857938-69857957	MS.gene005552:CDS	45.0%
!	TTATCTGTTGGCATCGAAGG+TGG	-	chr1.4:69860406-69860425	MS.gene005552:intron	45.0%
!!	CGAACTGGTTTGGATTATGC+AGG	-	chr1.4:69857933-69857952	MS.gene005552:CDS	45.0%
!!	CTGGTTTGGATTATGCAGGT+CGG	-	chr1.4:69857937-69857956	MS.gene005552:CDS	45.0%
!!	GATGAAAGTGCCTTTGAGAG+AGG	+	chr1.4:69857561-69857580	None:intergenic	45.0%
!!	GGAAGCGTTTAAGGAATTGC+CGG	-	chr1.4:69859027-69859046	MS.gene005552:CDS	45.0%
!!	TGAAAGTGCCTTTGAGAGAG+GGG	+	chr1.4:69857559-69857578	None:intergenic	45.0%
!!	TGTTGATTCAGCTGATGCTC+TGG	-	chr1.4:69858436-69858455	MS.gene005552:intron	45.0%
	AAGTACGAGGATGGAGCTGA+TGG	-	chr1.4:69857875-69857894	MS.gene005552:intron	50.0%
	AATTCCTTGCTCAGGGGGAT+AGG	+	chr1.4:69859729-69859748	None:intergenic	50.0%
	ACTGAGAATCGATGGGTGGT+TGG	-	chr1.4:69860582-69860601	MS.gene005552:intron	50.0%
	CACTCTTTCTCACCCAAAGG+AGG	+	chr1.4:69859498-69859517	None:intergenic	50.0%
	CCAGACAATGTCGGAATTGG+CGG	+	chr1.4:69859137-69859156	None:intergenic	50.0%
	CCATAAGCACGAGCCGAATA+GGG	-	chr1.4:69857493-69857512	MS.gene005552:intron	50.0%
	CGTCCTAGACTGAGAATCGA+TGG	-	chr1.4:69860574-69860593	MS.gene005552:intron	50.0%
	CTAGACTGAGAATCGATGGG+TGG	-	chr1.4:69860578-69860597	MS.gene005552:intron	50.0%
	CTCCTTTGGGTGAGAAAGAG+TGG	-	chr1.4:69859496-69859515	MS.gene005552:intron	50.0%
	GAATATATACCAGGAGGCGG+CGG	+	chr1.4:69857674-69857693	None:intergenic	50.0%
	GAATCACCGAAGTACGAGGA+TGG	-	chr1.4:69857866-69857885	MS.gene005552:intron	50.0%
	GCGTTTAAGGAATTGCCGGA+AGG	-	chr1.4:69859031-69859050	MS.gene005552:CDS	50.0%
	GGGAGTAGTACGAGAGAGTA+TGG	+	chr1.4:69859068-69859087	None:intergenic	50.0%
	GTCACGCAACAGAGGAAGAT+TGG	-	chr1.4:69860549-69860568	MS.gene005552:intron	50.0%
	TATTTCCCCCCCTCTCTCAA+AGG	-	chr1.4:69857548-69857567	MS.gene005552:intron	50.0%
	TCAGCTCCATCCTCGTACTT+CGG	+	chr1.4:69857875-69857894	None:intergenic	50.0%
	TCCGAGATCCTCATTGTAGC+TGG	-	chr1.4:69857519-69857538	MS.gene005552:intron	50.0%
	TGCAACTGCTCCCACCAAAA+AGG	-	chr1.4:69859207-69859226	MS.gene005552:intron	50.0%
	TGTGGTGGTATGCCTCCTTT+GGG	-	chr1.4:69859483-69859502	MS.gene005552:intron	50.0%
	TTGTGGTGGTATGCCTCCTT+TGG	-	chr1.4:69859482-69859501	MS.gene005552:intron	50.0%
	TTTGGTGGGAGCAGTTGCAA+GGG	+	chr1.4:69859206-69859225	None:intergenic	50.0%
!	AAAGTGCCTTTGAGAGAGGG+GGG	+	chr1.4:69857557-69857576	None:intergenic	50.0%
!	GATGGAGCTGATGGTGAAGA+TGG	-	chr1.4:69857884-69857903	MS.gene005552:intron	50.0%
!	TTTTGGTGGGAGCAGTTGCA+AGG	+	chr1.4:69859207-69859226	None:intergenic	50.0%
!!	CACCCATCGATTCTCAGTCT+AGG	+	chr1.4:69860580-69860599	None:intergenic	50.0%
!!	GAAAGTGCCTTTGAGAGAGG+GGG	+	chr1.4:69857558-69857577	None:intergenic	50.0%
	CCGCCAATTCCGACATTGTC+TGG	-	chr1.4:69859134-69859153	MS.gene005552:intron	55.0%
	CTACTCCCATTGATGTCGGC+AGG	-	chr1.4:69859080-69859099	MS.gene005552:intron	55.0%
	GAGAGCCTGCCGACATCAAT+GGG	+	chr1.4:69859088-69859107	None:intergenic	55.0%
	GAGCGAGTGATCATGTGCGT+GGG	-	chr1.4:69858139-69858158	MS.gene005552:intron	55.0%
	GAGTGATCATGTGCGTGGGA+GGG	-	chr1.4:69858143-69858162	MS.gene005552:intron	55.0%
	GCCATAAGCACGAGCCGAAT+AGG	-	chr1.4:69857492-69857511	MS.gene005552:intron	55.0%
	TGATCCTATCCCCCTGAGCA+AGG	-	chr1.4:69859722-69859741	MS.gene005552:intron	55.0%
	TGTCGGAATTGGCGGCAGAA+AGG	+	chr1.4:69859129-69859148	None:intergenic	55.0%
!	AAGTGCCTTTGAGAGAGGGG+GGG	+	chr1.4:69857556-69857575	None:intergenic	55.0%
!	CCCTATTCGGCTCGTGCTTA+TGG	+	chr1.4:69857496-69857515	None:intergenic	55.0%
	ATGGCGGCAATGCACCCTTC+CGG	+	chr1.4:69859049-69859068	None:intergenic	60.0%
	CGAGCGAGTGATCATGTGCG+TGG	-	chr1.4:69858138-69858157	MS.gene005552:intron	60.0%
	CGAGTGATCATGTGCGTGGG+AGG	-	chr1.4:69858142-69858161	MS.gene005552:intron	60.0%
	GGAGAGCCTGCCGACATCAA+TGG	+	chr1.4:69859089-69859108	None:intergenic	60.0%
	GTGGGAGCAGTTGCAAGGGA+AGG	+	chr1.4:69859202-69859221	None:intergenic	60.0%
	TGATTTAGTCCGCCGCCTCC+TGG	-	chr1.4:69857662-69857681	MS.gene005552:intron	60.0%
!	AATGTGCTGCTCCTGGGTGG+AGG	-	chr1.4:69860527-69860546	MS.gene005552:intron	60.0%
!	GCAAATGTGCTGCTCCTGGG+TGG	-	chr1.4:69860524-69860543	MS.gene005552:intron	60.0%
	CTGTTGCGTGACCTCCACCC+AGG	+	chr1.4:69860541-69860560	None:intergenic	65.0%
	GGGTGGAGGTCACGCAACAG+AGG	-	chr1.4:69860541-69860560	MS.gene005552:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.4	gene	69856715	69860744	69856715	ID=MS.gene005552
chr1.4	mRNA	69856715	69860744	69856715	ID=MS.gene005552.t1;Parent=MS.gene005552
chr1.4	exon	69860675	69860744	69860675	ID=MS.gene005552.t1.exon1;Parent=MS.gene005552.t1
chr1.4	CDS	69860675	69860744	69860675	ID=cds.MS.gene005552.t1;Parent=MS.gene005552.t1
chr1.4	exon	69859776	69859834	69859776	ID=MS.gene005552.t1.exon2;Parent=MS.gene005552.t1
chr1.4	CDS	69859776	69859834	69859776	ID=cds.MS.gene005552.t1;Parent=MS.gene005552.t1
chr1.4	exon	69859531	69859605	69859531	ID=MS.gene005552.t1.exon3;Parent=MS.gene005552.t1
chr1.4	CDS	69859531	69859605	69859531	ID=cds.MS.gene005552.t1;Parent=MS.gene005552.t1
chr1.4	exon	69859002	69859073	69859002	ID=MS.gene005552.t1.exon4;Parent=MS.gene005552.t1
chr1.4	CDS	69859002	69859073	69859002	ID=cds.MS.gene005552.t1;Parent=MS.gene005552.t1
chr1.4	exon	69858177	69858449	69858177	ID=MS.gene005552.t1.exon5;Parent=MS.gene005552.t1
chr1.4	CDS	69858177	69858449	69858177	ID=cds.MS.gene005552.t1;Parent=MS.gene005552.t1
chr1.4	exon	69857921	69858045	69857921	ID=MS.gene005552.t1.exon6;Parent=MS.gene005552.t1
chr1.4	CDS	69857921	69858045	69857921	ID=cds.MS.gene005552.t1;Parent=MS.gene005552.t1
chr1.4	exon	69856715	69857204	69856715	ID=MS.gene005552.t1.exon7;Parent=MS.gene005552.t1
chr1.4	CDS	69856715	69857204	69856715	ID=cds.MS.gene005552.t1;Parent=MS.gene005552.t1

Gene Sequence

>MS.gene005552

ATGCAACTTGTGACTGACTTTTCTTACTCAAACCACAACCAAATCAACACAAACTTAGAGTATGACTCCAGTAATTCTCTCTATATTCTTTAGAAATGTAAGAATCGGGCTAAGATTACACTTCAAAAAAATACAAGTAATATCTTAGAAATTTCATTGAGAAATATGAAGGATTATGAGTCTAATTTCCACTTAACTAAGACTCATTTACATGTGAGACAAACAGAGATGGGATGATTGAGAGAATTTGTAGAAAATAAGAAAATGACAATGTGATGTTTTAGATAAGTTGTAATTAGGACTAAAAGTTGTAATTATTGTGTTTGTCAAGTCTCTTGCACCCATTTATCTAATTTCATGACTAATTTTTAAATCAAGCGTGCTATCAAGTCCCTCTCATTTTAACAAATCAAACACACTCTTGATTTTACTCTTAGTTTTAGAAGGATTCCCAAAACCTCCTACCGTAGTTTTAATTATCACTTGTTATTTACTCCCTAATTTAGTCTTACAATATAAGTCACTTTAGCAAATGATACACAAATACCAAAATGGTTAACTTACTCCTACCCACCACATAGAACATAAAGTTTTACTAGATTGCAACAACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTAATATTATTTTTGACCAAATTATTATTACCAAAAAGGTTACATAAGGCTACTACTATAAAACCCTAAAGGTGCAGTAACACACACACATTCAGTAGCGCCATAAGCACGAGCCGAATAGGGATTTCCGAGATCCTCATTGTAGCTGGAGTTGGTATTTCCCCCCCTCTCTCAAAGGCACTTTCATCAACATTTTTTTCTGTGCTCGTCTGATTCCATATTGTTCATTTAGGTTACAGCACCATCCTTTTAACAAACGGCACACTCTCTGATTTAGTCCGCCGCCTCCTGGTATATATTCATATATGTATTTGCAAGGCCTTGTTGAAAACGAGTTGAATGTGTATATGTTATTTTATGGGAGATGACTATGAATATGATTAGGGTTTCATTGTCTCAAACTAAAGCCGACTGTTTCTAAATTTGTTTTCTTCCTAAATTAAGATCTTATTTCATTGTAGTTGCTGGTGAAAGAATCACCGAAGTACGAGGATGGAGCTGATGGTGAAGATGGTGTTGATTCCACTGATGCTCATGTAACGAACTGGTTTGGATTATGCAGGTCGGGCAAAATATGTTTTGAATATCGAACACTGTAAGATACACAGTTGAATTTATCACTTGATTTGATGCCAGTTATATCTAAATAAAGATAAATGCAACCGAACAGATCTCCTAAAAATCTGATTTGATGCTTGCACAAGATTTGGTATTCTATATTGAAATAGAGTAAAATGTGTATAGGCGAGCGAGTGATCATGTGCGTGGGAGGGTAAAAATGATTATGGTTTCAGAATATTCTTGTTTAATTTTTCATCTAATTGTCGATAATTCTGACCATAAGTGCATTTGGTTCCCACAATTTTGGAGTGATTTTCTCAAACTAAACTGTGTTTTCTTCCTAGATTAATATCTTGTTTTTTACACCTCGATTATAGGTTTCTAATAAACTCTGATTTTGTTAAATTCTGTATTAAATTAATTTCGTTGTAGTTGCTGGTGAAAGGATCGCCAAATTCTGGGGATCAAGCTGAAGGTGAAGATGTTGATTCAGCTGATGCTCTGGTAACAATCTAAGTTGATTATGTCTCAACCCGTCACGAAAAGCCATAGACTCCAAACCCAAAAACATTGTTCAGCTATGAGTTTCTTCTCCTCATTGTTCCATTGCACAATTACAATGCATGCTACATATTGTTGGATTTATCACTCGATTTGATGCTTGCACATGTATATATACTATTATATAAAAGCAACTTCTAAGTTAACTACTTTTTGGTTGGACTTTTTAACTACCCTTAGCAATCCAATTCATTTTTCAAAATTAAATTTAAATCTTTGTCTAAGTTATAGAAAATATGAAAACAAACTATCTTTTGGTTGAATAACTTCTTCTACAAATTTTCCCATAACAATCTATTTTTTTCAAATTTAAAGTTAAAAACAACATAAAATATAAATACAAGGAAATACAATCAAAACATGTGGATAGACGGGCACGTAGTGCCTACCTTTCTGCTAGTTTTTAATAAAATCATACACTACTTAACACTAAAAAACTAGTATAAATACAGCAATAACTAGACCAATTTTGAAACCTTTATTCTTTCTTCTTAGGATGAAATAGAAAGAATGGAAGCGTTTAAGGAATTGCCGGAAGGGTGCATTGCCGCCATACTCTCTCGTACTACTCCCATTGATGTCGGCAGGCTCTCCCTCGTTTCTAAAACATTCCTTTCTGCCGCCAATTCCGACATTGTCTGGAATCATTTTCTCCCTGCCGATTCTCAATTCATCTCTCAGTATCCTTCCCTTGCAACTGCTCCCACCAAAAAGGCTCTCTATCTCGCTCTATCTGATCATACAATCATCATCGACCATGCTGAAAAGGTATTCTTTGTCACAATCGATTTCTCTTATATTATGGCTTATCATTGAATTGATTGTGGTGCCAAAAGCTATTTAGTTTTAAGATGTTTAGTTTAGATAACGCTAATAAGCATTGGGTTGTTTAAATTAAGAGCTTTCAATTGGACAAAAAGAGTGGAAAGAAGTGTTACATGCTTGCTGCTAGAGCTCTTACAATTGATTGTGGTGGTATGCCTCCTTTGGGTGAGAAAGAGTGGATTCATATGCAAAATTCCAGGTTAGCTTTTAAGTTTCTAAGTTTTTTTCTTAGATGTTAATTATACTATTATTGCTTGATATCTTAATTAACTCTTAATCAACAGTTATCTAAACCTTTATGAATACTACCTCTGTGAATCAAATGGATCACACTCAACATATTTTATGGGCTTGAATGATTCTATTTCCTATGTTTGTTGATTGATCCTATCCCCCTGAGCAAGGAATTTTTTTCGACTTTTAGACCATGCCATAGATAAATGTCTTAAATTTCATCGATTCTCTTAAAATGAGAAGGCTGCAGGTTGTATGAAATAACTGAAATGTCATTTTTCATTTCAAGGGATATAAAGTTGAATGGAAATATTTTCCATTTTGAACTTCTCTCACTTTCTCCTCATTTTTCCTTCTAAGTGAATACTTCTTGTTTAACTATTAAATCCAAAAGTTAACTATACTATACACCTTAAACTAAACCTTAATATCAGTCATGGTGGTCCACCGTCTGATAATTCTCTTTATCGATAACAAACAATATAACCTATTAATTGAGAAGTTTATCATAATCATTTACTATTGAAATACTTTAGTTATGCTTGGTGTACAACTTCCGGATTTTAGTTGATGAGCCTGCATTGTTAGTGTATCTACTCGAGTATAAATGCTTCATTTATGATAGTATGAGTCACTTTCGACTTTTTTTTATCTTTGCAACTTATTACGCAAATTTGACAGGTTCCCTGAAGTTGCTAAGCTTTGTCGTGTGTTGTCGCTTGAAATTCGTGGGATGATTAACACTCTTTCCTTGTCCCCAAATACTAAGTATGCGGCTTATCTCGTGTTTAAGATGATTGATGCCCGTGGATTTAAGGACACACCTGTGGAATTATCTGTTGGCATCGAAGGTGGCCGTTGCAGCACAAAATTAGTTTGCTTGGAACGTTGGCTACACAACAAAGTAACACACCACGTTTGTTCGTTGAAGCCAAACAGCAAACATAAATGCAAATGTGCTGCTCCTGGGTGGAGGTCACGCAACAGAGGAAGATTGGGACGTCCTAGACTGAGAATCGATGGGTGGTTGGAGATTAAGATGGGTGAATTCTTCAATTCAAGCCTCGAAGATGAAGAAGTCTATATGAGTGTTATCGAGAAAAAGAGTAGTGAGATAAAGGAAAATTTATTTCTTCAAGGAATTGAAATTAGGCCTGCCAAAGACAATTGA

Protein sequence

>MS.gene005552.t1

MQLVTDFSYSNHNQINTNLEYDSSYSTILLTNGTLSDLVRRLLLLVKESPKYEDGADGEDGVDSTDAHLLVKGSPNSGDQAEGEDVDSADALDEIERMEAFKELPEGCIAAILSRTTPIDVGRLSLVSKTFLSAANSDIVWNHFLPADSQFISQYPSLATAPTKKALYLALSDHTIIIDHAEKSFQLDKKSGKKCYMLAARALTIDCGGMPPLGEKEWIHMQNSRFPEVAKLCRVLSLEIRGMINTLSLSPNTKYAAYLVFKMIDARGFKDTPVELSVGIEGGRCSTKLVCLERWLHNKVTHHVCSLKPNSKHKCKCAAPGWRSRNRGRLGRPRLRIDGWLEIKMGEFFNSSLEDEEVYMSVIEKKSSEIKENLFLQGIEIRPAKDN